>VPS_PSINU (Q9SLX9) Phloroisovalerophenone synthase (EC 2.3.1.156)|
           (Valerophenone synthase)
           (3-methyl-1-(trihydroxyphenyl)butan-1-one synthase)
          Length = 406

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 133 NWLVCRHDMMVEMIGRLEMVVAPNKLASW 47
           N L  R DM+VE + +L  V A N +A W
Sbjct: 96  NSLDVRQDMLVEEVPKLGKVAADNAIAEW 124

>NFASC_HUMAN (O94856) Neurofascin precursor|
          Length = 1347

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/71 (22%), Positives = 25/71 (35%)
 Frame = +3

Query: 21   GAAGAIPNLQLASLLGATTISNLPIISTIMSCLQTNQFCSITSYINTNPNTFPXXXXXXX 200
            GA GA+ +    ++   T  + +PII T+            T+   T   T         
Sbjct: 1045 GATGAVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTT 1104

Query: 201  XXXASVHRSAP 233
                 +H SAP
Sbjct: 1105 TSGTKIHESAP 1115

>L_MABVM (P31352) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2331

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 163  IQTPFHLTVNSSPRILHRSIDRHQEFFILQIL 258
            +QTP H+  +S  +IL +S+D H++F   +I+
Sbjct: 1786 MQTPAHIHSSSPFQILIKSLDAHEDFDASKII 1817

>NU5M_LOXAF (Q9TA19) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 606

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +3

Query: 36  IPNLQLASLLGATTISNLPIISTIMSCLQTNQFCSIT 146
           IP L L SL+    I  LPII+T++   +TN F  IT
Sbjct: 7   IPTLMLTSLI----ILTLPIITTLLQNNKTNCFLYIT 39

>HXA1_HUMAN (P49639) Homeobox protein Hox-A1 (Hox-1F)|
          Length = 335

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +2

Query: 89  PYHFHHHVMSTDQPILQHHIVYKHKSKHXXXXXXXXXXESCIGPSIGTKNFSS 247
           P+H HHH          HH   +  +             S  GPS G++NFS+
Sbjct: 64  PHHHHHH----------HHHHPQPATYQTSGNLGVSYSHSSCGPSYGSQNFSA 106

>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein|
           ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein
           ERA-1-399)
          Length = 331

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/53 (28%), Positives = 20/53 (37%)
 Frame = +2

Query: 89  PYHFHHHVMSTDQPILQHHIVYKHKSKHXXXXXXXXXXESCIGPSIGTKNFSS 247
           P+H HHH          HH   +  +             S  GPS G +NFS+
Sbjct: 59  PHHHHHH---------HHHHHPQTATYQTSGNLGISYSHSSCGPSYGAQNFSA 102


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,793,755
Number of Sequences: 219361
Number of extensions: 868818
Number of successful extensions: 1876
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)