>gb|AY505177.1| Pseudomonas stutzeri isolate WM88 operon phn, complete sequence
          Length = 10577

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 11   gcaccggcgcggcgccgccggtgcc 35
            ||||| |||||||||||||||||||
Sbjct: 9870 gcacctgcgcggcgccgccggtgcc 9846

>emb|BX005412.17| Zebrafish DNA sequence from clone DKEY-23O4 in linkage group 16, complete
              sequence
          Length = 250962

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    tgattgaccgatcgactgatc 278
              |||||||||||||||||||||
Sbjct: 190525 tgattgaccgatcgactgatc 190505

>gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 191886

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 234   agaatttttcatccttcaaat 254
             |||||||||||||||||||||
Sbjct: 82443 agaatttttcatccttcaaat 82423

>emb|BX005089.14| Zebrafish DNA sequence from clone CH211-134A12 in linkage group 16,
             complete sequence
          Length = 115003

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   tgattgaccgatcgactgatc 278
             |||||||||||||||||||||
Sbjct: 61972 tgattgaccgatcgactgatc 61992

>gb|AC117941.6| Felis catus clone RP86-565O15, complete sequence
          Length = 106621

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   ctttccacttaacagttaact 193
             |||||||||||||||||||||
Sbjct: 29835 ctttccacttaacagttaact 29855

>gb|AC006238.1|AC006238 Homo sapiens chromosome 18, clone hRPK.474_N_24, complete sequence
          Length = 211945

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 156    aacacaaatccaaacacctttccac 180
              |||||||||||||||| ||||||||
Sbjct: 191056 aacacaaatccaaacatctttccac 191080

>ref|XM_471136.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   cggcgcggcgccgccggtgc 34
            ||||||||||||||||||||
Sbjct: 1044 cggcgcggcgccgccggtgc 1063

>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0030I09 map C83B, complete sequence
          Length = 123477

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    caccggcgcggcgccgccgg 31
             ||||||||||||||||||||
Sbjct: 62502 caccggcgcggcgccgccgg 62521

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       agctagctagcttattaggt 68
                ||||||||||||||||||||
Sbjct: 14849191 agctagctagcttattaggt 14849172

>emb|BX511116.4| Zebrafish DNA sequence from clone CH211-164D19 in linkage group 1,
             complete sequence
          Length = 52397

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   ttcatccttcaaattcttga 260
             ||||||||||||||||||||
Sbjct: 29474 ttcatccttcaaattcttga 29455

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 12      caccggcgcggcgccgccggtgcc 35
               |||||||| |||||||||||||||
Sbjct: 1549450 caccggcgaggcgccgccggtgcc 1549427

>gb|AC154601.3| Mus musculus BAC clone RP23-342J18 from chromosome 16, complete
             sequence
          Length = 189457

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   aaacacaaatccaaacacctttcc 178
             ||||||||| ||||||||||||||
Sbjct: 17310 aaacacaaaaccaaacacctttcc 17287

>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete
              sequence
          Length = 149449

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     cggcgcggcgccgccggtgc 34
              ||||||||||||||||||||
Sbjct: 110386 cggcgcggcgccgccggtgc 110367

>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09,
             complete sequence
          Length = 155672

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    cggcgcggcgccgccggtgc 34
             ||||||||||||||||||||
Sbjct: 62701 cggcgcggcgccgccggtgc 62682

>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete
             sequence
          Length = 148021

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    agctagctagcttattaggt 68
             ||||||||||||||||||||
Sbjct: 83577 agctagctagcttattaggt 83596

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      cggcgcggcgccgccggtgc 34
               ||||||||||||||||||||
Sbjct: 1767434 cggcgcggcgccgccggtgc 1767415

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 12      caccggcgcggcgccgccgg 31
               ||||||||||||||||||||
Sbjct: 2559902 caccggcgcggcgccgccgg 2559883

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       agctagctagcttattaggt 68
                ||||||||||||||||||||
Sbjct: 14843725 agctagctagcttattaggt 14843706

>emb|BX276090.6| Zebrafish DNA sequence from clone RP71-39F17 in linkage group 5,
             complete sequence
          Length = 156425

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   ttgattgaccgatcgactga 276
             ||||||||||||||||||||
Sbjct: 77512 ttgattgaccgatcgactga 77531

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    caagaatttttcatccttca 251
              ||||||||||||||||||||
Sbjct: 554702 caagaatttttcatccttca 554683

>emb|BX119981.7| Zebrafish DNA sequence from clone RP71-31M18 in linkage group 5, complete
              sequence
          Length = 158974

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    ttgattgaccgatcgactga 276
              ||||||||||||||||||||
Sbjct: 102425 ttgattgaccgatcgactga 102406

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 10      agcaccggcgcggcgccgcc 29
               ||||||||||||||||||||
Sbjct: 1407471 agcaccggcgcggcgccgcc 1407452

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 12      caccggcgcggcgccgccgg 31
               ||||||||||||||||||||
Sbjct: 2568933 caccggcgcggcgccgccgg 2568914


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,566,600
Number of Sequences: 3902068
Number of extensions: 2566600
Number of successful extensions: 58305
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58011
Number of HSP's gapped (non-prelim): 294
length of query: 289
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 267
effective length of database: 17,147,199,772
effective search space: 4578302339124
effective search space used: 4578302339124
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)