Clone Information

BLAST Search Result

Clone Name	baet31e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	259	2e-69
2	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	199	3e-51
3	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	198	6e-51
4	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	193	2e-49
5	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	192	2e-49
6	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	190	1e-48
7	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	187	1e-47
8	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	177	1e-44
9	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	174	7e-44
10	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	72	5e-13
11	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	70	2e-12
12	PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloropl...	67	2e-11
13	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	65	8e-11
14	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	41	0.001
15	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	41	0.001
16	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	40	0.003
17	LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-II...	35	0.066
18	5E5_RAT (Q63003) 5E5 antigen	34	0.15
19	CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP ...	33	0.25
20	CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor	33	0.43
21	CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor	32	0.56
22	LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-II...	32	0.73
23	ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (...	32	0.95
24	CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family m...	31	1.2
25	VNUA_PRVKA (P33485) Probable nuclear antigen	31	1.6
26	PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34	31	1.6
27	LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related pr...	30	2.1
28	LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr...	30	2.1
29	FA21C_PONPY (Q5RDC1) Protein FAM21C	30	2.1
30	CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like pro...	30	2.1
31	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	30	2.1
32	ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro...	30	2.8
33	CRP_MOUSE (P14847) C-reactive protein precursor	30	2.8
34	CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar col...	30	2.8
35	AVEN_HUMAN (Q9NQS1) Cell death regulator Aven	30	2.8
36	GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding f...	30	2.8
37	FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related p...	30	2.8
38	CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor	30	2.8
39	IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precurs...	30	2.8
40	TRPE2_HALSA (Q9HS66) Anthranilate synthase component 1 2 (EC 4.1...	30	2.8
41	FA21C_HUMAN (Q9Y4E1) Protein FAM21C	30	3.6
42	KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C...	30	3.6
43	XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1...	30	3.6
44	SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)	30	3.6
45	YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ...	27	3.8
46	ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoce...	29	4.7
47	SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 prot...	29	4.7
48	SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1...	29	4.7
49	SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like...	29	4.7
50	SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like...	29	4.7
51	SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like...	29	4.7
52	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	29	4.7
53	RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Reti...	29	4.7
54	HIS4_NOCFA (Q5YYP5) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami...	29	6.2
55	THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC	29	6.2
56	GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outg...	29	6.2
57	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	29	6.2
58	HIS4_CORDI (P60580) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami...	29	6.2
59	VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)	29	6.2
60	RBL_XANFL (P23011) Ribulose bisphosphate carboxylase large chain...	29	6.2
61	RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha...	28	8.1
62	RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2...	28	8.1
63	OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OC...	28	8.1
64	NARJ_BACSU (P42178) Nitrate reductase delta chain (EC 1.7.99.4)	28	8.1
65	CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)	28	8.1
66	VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)	28	8.1
67	NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103	28	8.1
68	34KD_MYCTU (P65637) 34 kDa antigenic protein homolog	28	8.1
69	34KD_MYCBO (P65638) 34 kDa antigenic protein homolog	28	8.1
70	ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC...	28	8.1

>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  259 bits (662), Expect = 2e-69
 Identities = 131/135 (97%), Positives = 133/135 (98%)
 Frame = +1

Query: 46  MAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 225
           MAASLQAAAT+MPAKIGGRASS RPSSHVARAFGVDA ARITCSLQSDIREVASKCADAA
Sbjct: 1   MAASLQAAATVMPAKIGGRASSARPSSHVARAFGVDAGARITCSLQSDIREVASKCADAA 60

Query: 226 KMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF 405
           KMAGFALATSALLVSGA+AEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF
Sbjct: 61  KMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF 120

Query: 406 KAGKYEMKKFCLEPT 450
           KAGKYEMKKFCLEPT
Sbjct: 121 KAGKYEMKKFCLEPT 135

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>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  199 bits (505), Expect = 3e-51
 Identities = 97/138 (70%), Positives = 119/138 (86%), Gaps = 3/138 (2%)
 Frame = +1

Query: 46  MAASLQAAATLMPAKIGGRASS-VRPSSHVARAFGVD--AAARITCSLQSDIREVASKCA 216
           MA+SLQAAATL+PAK+G  A + +R +SH+++AFG D   A R+TCS+ SD+R++A KC 
Sbjct: 1   MASSLQAAATLIPAKVGAPARTHLRSNSHLSKAFGFDNSTAGRLTCSINSDLRDIAQKCT 60

Query: 217 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS 396
           DAAK+AGFALATSAL++SGASAEG PKRLTFDEIQSKTYMEVKG+GTANQCPTI+GG +S
Sbjct: 61  DAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEVKGSGTANQCPTIEGGTES 120

Query: 397 FPFKAGKYEMKKFCLEPT 450
           F +K GKY +KK CLEPT
Sbjct: 121 FGYKTGKYTLKKLCLEPT 138

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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  198 bits (503), Expect = 6e-51
 Identities = 102/141 (72%), Positives = 121/141 (85%), Gaps = 6/141 (4%)
 Frame = +1

Query: 46  MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 207
           MAASLQAAATLM P K+GG ++     +R S  V++AFG++ +A+R++CSLQ+D+++ A 
Sbjct: 1   MAASLQAAATLMQPTKVGGVSARNNLQLRSSQSVSKAFGLEPSASRLSCSLQTDLKDFAQ 60

Query: 208 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 387
           KC DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 388 VDSFPFKAGKYEMKKFCLEPT 450
           VDSF FK GKY  KKFCLEPT
Sbjct: 121 VDSFAFKPGKYNAKKFCLEPT 141

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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  193 bits (490), Expect = 2e-49
 Identities = 98/137 (71%), Positives = 115/137 (83%), Gaps = 2/137 (1%)
 Frame = +1

Query: 46  MAASLQAAATLM-PAKIGGRASSVRPSSHVARAFGVDA-AARITCSLQSDIREVASKCAD 219
           MAASLQAAATLM P K+      ++ +  V++AFG++   A++TCSLQSD +E+A KC +
Sbjct: 1   MAASLQAAATLMQPTKLRSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVE 60

Query: 220 AAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSF 399
           A+K+AGFALATSAL+VSGASAEGAPKRLTFDEIQSKTY+EVKGTGTANQCPTIDGGVDSF
Sbjct: 61  ASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVDSF 120

Query: 400 PFKAGKYEMKKFCLEPT 450
            FK GKY  KK CLEPT
Sbjct: 121 SFKPGKYNAKKLCLEPT 137

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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  192 bits (489), Expect = 2e-49
 Identities = 100/138 (72%), Positives = 118/138 (85%), Gaps = 3/138 (2%)
 Frame = +1

Query: 46  MAASLQAAATLM-PAKIGGRAS-SVRPSSHVARAFGVD-AAARITCSLQSDIREVASKCA 216
           MAASLQAAATLM P K+G R +  +R +  V++AFGV+  + R+TCSLQ++I+E+A KC 
Sbjct: 1   MAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCT 60

Query: 217 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS 396
           DAAK+AGFALATSAL+VSGA+AEG PKRLT+DEIQSKTYMEVKGTGTANQCPTI+GGV S
Sbjct: 61  DAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGS 120

Query: 397 FPFKAGKYEMKKFCLEPT 450
           F FK GKY  KKFCLEPT
Sbjct: 121 FAFKPGKYTAKKFCLEPT 138

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>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  190 bits (483), Expect = 1e-48
 Identities = 101/141 (71%), Positives = 118/141 (83%), Gaps = 6/141 (4%)
 Frame = +1

Query: 46  MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 207
           MAASLQAAATLM P K+G   +     +R +  V++AFGV+ AAAR+TCSLQ++++++A 
Sbjct: 1   MAASLQAAATLMQPTKVGVAPARNNLQLRSAQSVSKAFGVEPAAARLTCSLQTELKDLAQ 60

Query: 208 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 387
           K  DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 388 VDSFPFKAGKYEMKKFCLEPT 450
           V SF FK GKY  KKFCLEPT
Sbjct: 121 VASFAFKPGKYNAKKFCLEPT 141

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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  187 bits (474), Expect = 1e-47
 Identities = 98/140 (70%), Positives = 115/140 (82%), Gaps = 5/140 (3%)
 Frame = +1

Query: 46  MAASLQAAAT-LMPAKIGGRASS---VRPSSHVARAFGVDAA-ARITCSLQSDIREVASK 210
           MA SLQAAAT L PAKI    S    +R +  V ++FG+D++ AR+TCSL SD+++ A K
Sbjct: 1   MATSLQAAATFLQPAKIAASPSRNVHLRSNQTVGKSFGLDSSQARLTCSLHSDLKDFAGK 60

Query: 211 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 390
           C+DAAK+AGFALATSAL+VSGA AEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG 
Sbjct: 61  CSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGS 120

Query: 391 DSFPFKAGKYEMKKFCLEPT 450
           ++F FKAGKY  KKFC EPT
Sbjct: 121 ETFSFKAGKYTGKKFCFEPT 140

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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  177 bits (449), Expect = 1e-44
 Identities = 95/141 (67%), Positives = 113/141 (80%), Gaps = 6/141 (4%)
 Frame = +1

Query: 46  MAASLQAAAT-LMPAKIG---GRASS-VRPSSHVARAFGVD-AAARITCSLQSDIREVAS 207
           MAASLQ+ AT L  AKI     R SS +R +  V ++FG++ ++AR+TCS QSD ++   
Sbjct: 1   MAASLQSTATFLQSAKIATAPSRGSSHLRSTQAVGKSFGLETSSARLTCSFQSDFKDFTG 60

Query: 208 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 387
           KC+DA K+AGFALATSAL+VSGASAEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 388 VDSFPFKAGKYEMKKFCLEPT 450
            ++F FK GKY  KKFC EPT
Sbjct: 121 SETFSFKPGKYAGKKFCFEPT 141

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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  174 bits (442), Expect = 7e-44
 Identities = 91/140 (65%), Positives = 114/140 (81%), Gaps = 5/140 (3%)
 Frame = +1

Query: 46  MAASLQAAAT-LMPAKIGGRAS-SVRPSSHVARAFGVDAAA---RITCSLQSDIREVASK 210
           MAASLQA+ T L P K+  R +  +R + +V +AFGV++A+   R++ SLQSD++E+A+K
Sbjct: 1   MAASLQASTTFLQPTKVASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANK 60

Query: 211 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 390
           C DA K+AG ALATSAL+ SGA+AEG  KRLT+DEIQSKTY+EVKGTGTANQCPT++GGV
Sbjct: 61  CVDATKLAGLALATSALIASGANAEGG-KRLTYDEIQSKTYLEVKGTGTANQCPTVEGGV 119

Query: 391 DSFPFKAGKYEMKKFCLEPT 450
           DSF FK GKY  KKFCLEPT
Sbjct: 120 DSFAFKPGKYTAKKFCLEPT 139

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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
 Frame = +1

Query: 121 SSHVARAFGVDAAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKR 300
           ++   +A GV  AAR           V +     A+   F  A +A++ + A   G+   
Sbjct: 3   AAQTVKAAGVSRAAR----------PVRANVVCKAQKVEFGQAAAAVVAASALVAGSANA 52

Query: 301 LTFDEIQSKTYMEVKGTGTANQCPTID-GGVDSFPFKAGKYEMKKFCLEPT 450
           LT+DE+Q  TY++VKGTG AN CP ++ G  D     AG Y+++ FC+EPT
Sbjct: 53  LTYDELQGLTYLQVKGTGIANTCPVLEKGSTDLSELSAGTYKLENFCIEPT 103

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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = +1

Query: 157 AARITCSLQSDIREVASKCADA----AKMAGFALATSALLVSGASAEGAPKRLTFDEIQS 324
           A R   S ++ +R      A A    A+  G A A +AL    A   G+   LTFDEIQ 
Sbjct: 2   ALRAAQSAKAGVRAARPNRATAVVCKAQKVGQAAAAAALAT--AMVAGSANALTFDEIQG 59

Query: 325 KTYMEVKGTGTANQCPTIDGGVDSF-PFKAGKYEMKKFCLEPT 450
            TY++VKG+G AN CP ++ G  +    KAG Y+++ FC+EPT
Sbjct: 60  LTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPT 102

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>PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloroplast (OEE1)|
           (Fragment)
          Length = 31

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 283 EGAPKRLTFDEIQSKTYMEVKGTGTANQCPT 375
           EGAPKRLT+DEIQSKTYMEVKGTGTANQCPT
Sbjct: 1   EGAPKRLTYDEIQSKTYMEVKGTGTANQCPT 31

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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score = 65.1 bits (157), Expect = 8e-11
 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = +1

Query: 223 AKMAGFALATSALLVSGASAEGA-PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS- 396
           A +AG   A  A L+  A A  A    LT+DE+QS +Y+EVK +G A  CP +  GV S 
Sbjct: 69  AVLAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSK 128

Query: 397 FPFKAGKYEMKKFCLEPT 450
              KAGKYE+  +CLEP+
Sbjct: 129 LSLKAGKYEINNWCLEPS 146

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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +1

Query: 244 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV-DSFPFKAGK- 417
           +AT   +  G  +  AP    F   Q+ TY ++ GTG AN+CPT+D     ++P  + + 
Sbjct: 7   MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQT 63

Query: 418 YEMKKFCLEPT 450
           Y + + CL+PT
Sbjct: 64  YRIARLCLQPT 74

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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +1

Query: 244 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV-DSFPFKAGK- 417
           +AT   +  G  +  AP    F   Q+ TY ++ GTG AN+CPT+D     ++P  + + 
Sbjct: 7   MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQT 63

Query: 418 YEMKKFCLEPT 450
           Y + + CL+PT
Sbjct: 64  YRIARLCLQPT 74

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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +1

Query: 328 TYMEVKGTGTANQCPTI-DGGVDSFPFKAGK-YEMKKFCLEPT 450
           TY +++GTG AN+CP + +    S P  + K Y +K+ CLEPT
Sbjct: 34  TYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVLKELCLEPT 76

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>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 635

 Score = 35.4 bits (80), Expect = 0.066
 Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
 Frame = -1

Query: 366 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARDEEGRGCEGEA 235
           LVRG G  +  + L L  V+ Q  G                RP R+C+ D    GC G A
Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGPSPTPKAHPPRSPPPRPQRSCSLDLGDAGCYGYA 597

Query: 234 GHLGGVGALACDLPDVGLQGA--RDPGGSVD 148
             LGG  A        GL GA  R  GGS +
Sbjct: 598 RRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 628

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>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 35/102 (34%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
 Frame = -1

Query: 357 GAGTLHLHVGLALDFVEGQPLGRPLRTCARD-EEGRGCEGEAGHLGGVGALACDLPDVGL 181
           GA T H H             GR  R   R    G G     G  GG G         GL
Sbjct: 543 GAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGGAGASGGGRGGRGRGRGGRRGSGL 602

Query: 180 QGARDPGGSVDAERPGDVRRRPHG---GGPAADLGRHQRGRG 64
            G R+  GS  A R G+ RRR HG    G A    R +R RG
Sbjct: 603 SGTREDAGSPSARR-GEQRRRGHGPPAAGAAQVSTRGRRARG 643

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>CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 4) (Class-IV chitin
           synthase 4)
          Length = 1195

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 13/136 (9%)
 Frame = +1

Query: 10  DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSD 189
           +R +R P  PT MA+   A   L P  I G+ +  R S   + A+G  ++          
Sbjct: 567 ERGNRKPGLPTTMASQNAAGQLLHPGTIYGQGNESRSSFLKSDAYGSSSSPADGPGPAGF 626

Query: 190 IREVASKCADAAKMA-GFALATSALLVSGASAEGAPKRLTFDEIQSKTYME--------- 339
           I E       +  M  GF LA +  LV+  S      R T D I    Y           
Sbjct: 627 IHEAVVPQPPSDWMPFGFPLAHTICLVTAYSEGEMGVRTTLDSIAMTDYPNSHKVILVIC 686

Query: 340 ---VKGTGTANQCPTI 378
              +KG G  +  P I
Sbjct: 687 DGIIKGHGEEHSTPDI 702

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>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor|
          Length = 1022

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
 Frame = -1

Query: 309 EGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGD 130
           +G P  +  R     E  RG  GE G+ G  G       D GL G R P G+V    PG+
Sbjct: 435 KGGPGAKGERGDPGPEGPRGLPGEVGNKGARG-------DQGLPGPRGPTGAVG--EPGN 485

Query: 129 VRRRPHGG--GPAADLG----RHQRGR 67
           +  R   G  GP  D G    +  RGR
Sbjct: 486 IGSRGDPGDLGPRGDAGPPGPKGDRGR 512

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>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor|
          Length = 684

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 34/93 (36%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
 Frame = -1

Query: 330 GLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPD-----VGLQGAR- 169
           G A +  E  P G P      D    G  GEAGH G  GAL    P       G QG + 
Sbjct: 352 GRAGELGEAGPSGEP--GVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKG 409

Query: 168 ---DPGGSVDAERPGDVRRRPHGG--GPAADLG 85
              DPG        GDV  R  GG  GP  D G
Sbjct: 410 SMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQG 442

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>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 636

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 19/92 (20%)
 Frame = -1

Query: 366 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARD-EEGRGCEGE 238
           LVRG G  +  + L L  V+ Q  G                RP R+C+ D  +  GC G 
Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGTSPMPKSHPPRSPPPRPQRSCSLDLGDTGGCYGY 597

Query: 237 AGHLGGVGALACDLPDVGLQGA--RDPGGSVD 148
           A  LGG  A        GL GA  R  GGS +
Sbjct: 598 ARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 629

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>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger|
           DHHC domain-containing protein 18) (DHHC-18)
          Length = 388

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = +2

Query: 131 SPGRSASTLPPGSRAP---CNPTSGRSQA--SAPTPPRW 232
           SPG +     PG+R P    +PT G   A  +AP PPRW
Sbjct: 10  SPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRW 48

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>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)|
           (LAGE-1 protein) (ESO-2 protein)
          Length = 210

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 14/74 (18%)
 Frame = -1

Query: 261 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERP-GDVR 124
           EGRG  G  G   G G     +PD            G  G R P   G+  A  P G   
Sbjct: 4   EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAP 61

Query: 123 RRPHGGGPAADLGR 82
           R PHGG  +A  GR
Sbjct: 62  RGPHGGAASAQDGR 75

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 54/183 (29%), Positives = 63/183 (34%), Gaps = 43/183 (23%)
 Frame = -1

Query: 438  AELLHLVLAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEE 259
            AEL+  ++ GL    +     G  L  G      H GL L          P     RDE+
Sbjct: 1259 AELVEALVGGLHPRVLQP---GHGLAGGPAVDEAHEGLVL---------LPRVPHLRDED 1306

Query: 258  G----RGCEGEAG---------HLGGV-GALACD------------LPDVGLQ---GARD 166
            G    RG     G          L GV GA   D            LP+ G Q   G R 
Sbjct: 1307 GHGPGRGAVAGRGLADVVLVPEPLAGVPGAAVADAAVGRRVGAGPGLPERGEQRPVGRRG 1366

Query: 165  P----------GGSVDAERPGDVRRRPHGG--GPAADLGRHQRGRG--LERRCHVGRWAW 28
            P          G ++ A  PG +R R  GG  G     GR  RGRG    RR   G   W
Sbjct: 1367 PVGHEREVVVGGAALPARGPGGLRGRGRGGRGGGGGGGGRGPRGRGGRRRRRWRPGAGEW 1426

Query: 27   YAG 19
             AG
Sbjct: 1427 GAG 1429

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>PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34|
          Length = 515

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 26/82 (31%), Positives = 30/82 (36%)
 Frame = -1

Query: 258 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 79
           G G  G AG  GG G     L   G  G   P G+ D    GD R   + GG    +G  
Sbjct: 228 GLGKAGFAGGAGGTGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGN-GGDGGSVGAA 286

Query: 78  QRGRGLERRCHVGRWAWYAGRS 13
             G G       G W +  G S
Sbjct: 287 PTGIGNGGNGGNGGWLYGDGGS 308

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>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
 Frame = +1

Query: 160  ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 300
            AR+  SL++ I     K  C  A  + G    T    ++ A+ +G+           P  
Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737

Query: 301  LTFDEIQSKTYMEVKGTGTANQCPTIDGG 387
            L+ D +++K Y    G GT N+C  +DGG
Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765

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>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
 Frame = +1

Query: 160  ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 300
            AR+  SL++ I     K  C  A  + G    T    ++ A+ +G+           P  
Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737

Query: 301  LTFDEIQSKTYMEVKGTGTANQCPTIDGG 387
            L+ D +++K Y    G GT N+C  +DGG
Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765

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>FA21C_PONPY (Q5RDC1) Protein FAM21C|
          Length = 1340

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
 Frame = +1

Query: 40  TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 219
           ++ +AS    A L+P K+    S           FG  AA R T SLQ+   E A     
Sbjct: 548 SSQSASKLKGAPLLPGKLPTSVSLFEDEDEEDNLFGGTAAKRQTLSLQAQGEEKAKASEL 607

Query: 220 AAKMAGFALATSALLVSGASAE--GAPKRLTFDEIQSKTYMEVKGTGT 357
           + K A      SALL S    +    P   T     S++  E + +GT
Sbjct: 608 SKKKA------SALLFSSDEEDQWNIPASQTHSASDSRSKGESRDSGT 649

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>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)|
          Length = 1285

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 342 HLHVGLALDFVEGQPLGRPLRTCARDEEGRGC 247
           H+HVG  L   + QP G P R C +D    GC
Sbjct: 744 HVHVGGRLLAADSQPWGGPFRGCLQDLRLDGC 775

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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
 Frame = -1

Query: 252  GCEGEAGHLGGVGAL-----ACDLPDVGLQGAR-DPGGSVDAERPGDVRRRPHGGGP--A 97
            G +GE GH+G +G +     A +  D GL G +  PG   D   PG +    H G P  A
Sbjct: 1397 GPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVA 1456

Query: 96   ADLGR 82
              LG+
Sbjct: 1457 GPLGQ 1461

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>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = +1

Query: 1   HE*DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVR------PSSHVARAFG 147
           H     + VP PP +      +  +LMP + GG +SS+R      P S++  A+G
Sbjct: 161 HPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYG 215

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>CRP_MOUSE (P14847) C-reactive protein precursor|
          Length = 225

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 19  SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAA 159
           S +P  PT++ AS ++A  ++   I G+A  VR S H     G DA+
Sbjct: 106 SEIPEAPTHICASWESATGIVEFWIDGKA-KVRKSLHKGYTVGPDAS 151

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>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)|
           (Fragment)
          Length = 547

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -1

Query: 255 RGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGR 82
           +G +GE G L G+   +      G  G   P G+  A +PG +R +P   GP  DLGR
Sbjct: 27  QGPDGEPG-LPGLPGQSGKSGASGQPGVPGPVGA--AGKPGSIRGQPGPPGPPGDLGR 81

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>AVEN_HUMAN (Q9NQS1) Cell death regulator Aven|
          Length = 362

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -1

Query: 177 GARDPGGSVDAERPG---DVRRRPHGGGPAADLGRHQRGRG 64
           G   PGG   +ERPG    V R   GGG     GR  RGRG
Sbjct: 16  GRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRG 56

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>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)|
          Length = 449

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
 Frame = -1

Query: 402 GEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLG 223
           G G  AA  G A   GAG+   HV     +    P+       AR+  G    G     G
Sbjct: 90  GSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMA---NGAAREPGGYAAAGS----G 142

Query: 222 GVGALACDLPDVGLQGARDPG-GSVDAERP 136
           G G ++     +   G R+P   S+ A RP
Sbjct: 143 GAGGVSGGGSSLAAMGGREPQYSSLSAARP 172

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>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
          Length = 553

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = -1

Query: 258 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAAD 91
           G G  G AG  GG G   C+L  + L  A + GG +     G        GG A D
Sbjct: 377 GGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGG-------AGGSAVD 425

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>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor|
          Length = 675

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -1

Query: 252 GCEGEAGHLGGVGALACDLPDVGLQGARDPGG---SVDAERPGDVRRRPHGGGPAADLG 85
           G +G  GH GG G +  +  + G  G   P G   SV  + P  +R  P   GPA D G
Sbjct: 186 GFKGHTGHKGGPGEIGKE-GEKGSPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRG 243

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>IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precursor (CD81|
           partner 3) (Glu-Trp-Ile EWI motif containing protein 2)
           (EWI-2) (Keratinocytes-associated transmembrane protein
           4) (KCT-4) (Prostaglandin regulatory-like protein)
           (CD316 antigen)
          Length = 611

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 29/76 (38%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
 Frame = -1

Query: 312 VEGQPLGRPLRTC---ARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAE 142
           V G P G  L       R EEG    G A  +GGVG        V   G R  GG V  E
Sbjct: 464 VRGGPPGLRLAASWWVERPEEGELSSGPAQLVGGVGQ-----DGVAELGVRPGGGPVSVE 518

Query: 141 --RPGDVRRRPHGGGP 100
              P   R R HG GP
Sbjct: 519 LVGPRSHRLRLHGLGP 534

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>TRPE2_HALSA (Q9HS66) Anthranilate synthase component 1 2 (EC 4.1.3.27)|
           (Anthranilate synthase component I 2)
          Length = 488

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 24/78 (30%), Positives = 33/78 (42%)
 Frame = -1

Query: 423 LVLAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEEGRGCE 244
           L   G +G+    ++  R LVR A T HL VG  +   +  P      T A+    R   
Sbjct: 414 LAAIGFDGDAT-LSITIRTLVRRAATYHLRVGAGI-VHDSTPAAEYDETLAK---ARALV 468

Query: 243 GEAGHLGGVGALACDLPD 190
              G  GG+G +A   PD
Sbjct: 469 TALGDAGGIGRVADTTPD 486

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>FA21C_HUMAN (Q9Y4E1) Protein FAM21C|
          Length = 1320

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +1

Query: 40  TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 219
           ++ +AS    A+L+P K+    S           FG  AA + T SLQ+  RE  +K ++
Sbjct: 549 SSQSASNLKGASLLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLSLQAQ-REEKAKASE 607

Query: 220 AAKMAGFALATSA 258
            +K    AL  S+
Sbjct: 608 LSKKKASALLFSS 620

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>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -1

Query: 174 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 64
           A  P G      PG  R  P  G PAA +GRH  G G
Sbjct: 49  AASPAGPPAPRGPGGRRAEPCPGLPAAAMGRHGGGGG 85

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>XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 327

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -2

Query: 161 AAASTPNARATCDDGRTEEARPPILAG-ISVAAAWRDAAMLVGGLGTR 21
           A A+ PNA+   +D   + A  P LAG +S    W +A + + G+G++
Sbjct: 186 ARAADPNAKLYINDYNLDSASYPKLAGMVSHVKKWIEAGIPIDGIGSQ 233

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>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = -1

Query: 258 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 79
           G   +G  G LGG GA       +G QGA    G+  A   G   +  +GG  +   GR 
Sbjct: 11  GGAGQGGYGGLGGQGAGQGGYGGLGGQGAGQGAGAAAAAAAGGAGQGGYGGLGSQGAGRG 70

Query: 78  QRGRG 64
            +G G
Sbjct: 71  GQGAG 75

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>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 26.6 bits (57), Expect(2) = 3.8
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = +1

Query: 28  PSPPTNMAASLQAAATLMPA--KIGGRA--SSVRPSSHVAR 138
           P PP + A+S QAAA   P+  ++  R   S+ RPSS  AR
Sbjct: 235 PRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPAR 275



 Score = 21.6 bits (44), Expect(2) = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +2

Query: 140 RSASTLPPGSRAPCNPTSGRSQAS---APTPP 226
           R+ +   P  R P  PT  R +A+   +P PP
Sbjct: 300 RAPAGCSPARRTPSAPTDRRCRAARRGSPRPP 331

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>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 480

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +1

Query: 19  SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVA 135
           S VP+PP        AAAT  P  + GRA   RPS  VA
Sbjct: 282 SPVPAPPPGPPRPAAAAATTAPL-VNGRAGKRRPSRLVA 319

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>SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 protein (xSMC1)|
          Length = 1232

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 417 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 286
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1 protein|
           (SMC-protein)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 417 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 286
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like 1 protein|
           (SMC1alpha protein) (Chromosome segregation protein
           SmcB) (Sb1.8)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 417 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 286
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like 1 protein|
           (SMC1alpha protein) (DXS423E protein) (Sb1.8)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 417 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 286
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like 1 protein|
           (SMC-protein)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 417 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 286
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 22/64 (34%), Positives = 23/64 (35%)
 Frame = -1

Query: 294 GRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRP 115
           GRP R       GR   G  G+ GG GA               PG    A   G  R RP
Sbjct: 272 GRPGRPGGAPGAGRPGGGGGGYRGGGGA---------------PGAGAGAPAGGGFRGRP 316

Query: 114 HGGG 103
            GGG
Sbjct: 317 GGGG 320

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>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa|
            1-like protein 1)
          Length = 1859

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 37   PTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITC 174
            PT +AAS Q    L+ +K G  +S    SS VA+     A A I C
Sbjct: 1044 PTKVAASTQIMKALLGSKPGRPSSLPEVSSTVAQRLSSSAGAFIAC 1089

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>HIS4_NOCFA (Q5YYP5) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 243

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 450 GGLQAELLHLVLAGLEGEGVDAAVDGRALVRGAGTL 343
           GG+ A    + +AGL  EGV+ A+ G+AL  G  TL
Sbjct: 200 GGVSAIEDLVAIAGLVPEGVEGAIVGKALYAGRFTL 235

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>THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC|
          Length = 666

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +1

Query: 172 CSLQ--SDIREVASKCADAAKMAGFALATSALLVSGASAEG-APKRLTFDEIQSKTYMEV 342
           CS++   D+R+ A+   D  K A + +  + + +SG   +G A     F E+ S  Y++ 
Sbjct: 596 CSMKITQDVRDYAAGLGDNEKAALYPVGHAGMTISGTIEDGMAQMSAKFKEMGSSVYLDA 655

Query: 343 KGTGTANQ 366
           +    +N+
Sbjct: 656 EKVKESNK 663

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>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 131 SPGRSASTLPPGSRAPCNPTSGRS-QASAPTPPR 229
           SP   A+  PPG R   N T   S +ASAP PPR
Sbjct: 776 SPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPR 809

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3223

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -1

Query: 174 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 64
           A  P     AE+PGD   RP   GPA   GR + G G
Sbjct: 552 AAQPPSPSSAEKPGDEPGRPRSRGPA---GRTEPGEG 585

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>HIS4_CORDI (P60580) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 242

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -1

Query: 450 GGLQAELLHLVLAGLEGEGVDAAVDGRALVRGAGTL 343
           GG+      L LA  E EG+D+A+ G+AL  G  TL
Sbjct: 200 GGISTLEDVLELARYEDEGIDSAIIGKALYEGRFTL 235

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>VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)|
          Length = 417

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = -1

Query: 273 ARDEEGR------GCEGEAGHLGGVGALACDLPDV--GLQGARDPGGSVDAERP 136
           AR++EG       G EG  G  G  G      P+   G +G   PG S DA+RP
Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESQTPEANGGAEGEPKPGPSPDADRP 336

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>RBL_XANFL (P23011) Ribulose bisphosphate carboxylase large chain (EC|
           4.1.1.39) (RuBisCO large subunit)
          Length = 488

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
 Frame = -1

Query: 432 LLHLVLAG------LEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPL 295
           LLH+  AG       +G G+   V  + L R AG  HLH G A+  +EG P+
Sbjct: 294 LLHMHRAGHGTYTRQKGHGISFRVIAKWL-RLAGVDHLHTGTAVGKLEGDPM 344

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>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
 Frame = -1

Query: 258 GRGCEGEAGHLGGVGALACDLPDVGLQG-ARDPGGSVDAER------PGDVRRRPHGGG 103
           GR   G  G  G  G  + +    G  G AR PGG   A R      PG   RRP GGG
Sbjct: 488 GRPSGGRPGPGGNRGPASANRGPGGPGGGARGPGGPGGAPRGPGGRPPGGGNRRPPGGG 546

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>RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1427

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49   AASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAAK 228
            A+ ++  +  +P+ I G    V+    V    G++   R    +   +R      AD  +
Sbjct: 985  ASDVKDTSLRVPSGIAGTVIDVQ----VFTREGIERDKRAQAIIDEHLRHYKLDLADQMR 1040

Query: 229  MAGF-ALATSALLVSGASAEGAPKRLTFDEIQSKTYME 339
            +    A A    L++G  A G PK+L    +  K Y++
Sbjct: 1041 IVERDAFARVERLITGKKANGGPKKLAKGTVIDKVYLD 1078

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>OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OCD 1)|
          Length = 329

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +1

Query: 115 RPSSHVARAFGVDAAARI---TCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 285
           R  S VA  FG    AR+     +L   IRE      DAAK    A+A    L     AE
Sbjct: 129 REDSSVAAVFGAGMQARLQLEALALVRPIREARIWARDAAKAEAAAIALGGKLGFAVKAE 188

Query: 286 GAPK 297
             P+
Sbjct: 189 TDPR 192

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>NARJ_BACSU (P42178) Nitrate reductase delta chain (EC 1.7.99.4)|
          Length = 184

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 444 LQAELLHLVLAGLEGEGVDAAVDG 373
           + AELLH++LA LE  GV  +V+G
Sbjct: 157 IYAELLHVLLAALENIGVRESVEG 180

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>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = -1

Query: 270 RDEEGRGCEGEAGHLGGVGALACDLP--DVGLQGARDPGGSVDAERPGDVRRRPHGGG 103
           R E  R  EG+A      GA    +P   V  +G+ D GGSVDA    D       GG
Sbjct: 129 RGEAAREAEGQAAAPAAPGAQEEAVPGDSVDAEGSIDAGGSVDAAGSVDAGGSIDAGG 186

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>VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)|
          Length = 417

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = -1

Query: 273 ARDEEGRGCEGEAGHLG--------GVGALACDLPDVGLQGARDPGGSVDAERP 136
           AR++EG   +G AG  G        G G       + G +G   PG S DA+RP
Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESPTPEANGGAEGEPKPGPSPDADRP 336

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>NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103|
          Length = 394

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 334 CRSCSGFRRRSASWA 290
           CRSC+ F RRSA+W+
Sbjct: 28  CRSCAAFFRRSATWS 42

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>34KD_MYCTU (P65637) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 18 FPRTKPTDQHGSVSPSRGHADAG 86
          +P+ +P   +G V+PS  HAD G
Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32

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>34KD_MYCBO (P65638) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 18 FPRTKPTDQHGSVSPSRGHADAG 86
          +P+ +P   +G V+PS  HAD G
Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32

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>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
            2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 52   ASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREV 201
            A L  A  + PA + G +     ++HVA A  ++AAA++       +RE+
Sbjct: 2087 AELWRAHGVTPAAVVGHSQGEIAAAHVAGALSLEAAAKVVALRSQVLREL 2136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,824,457
Number of Sequences: 219361
Number of extensions: 1243683
Number of successful extensions: 6090
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 5403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6052
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result