ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet31e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 62 3e-10
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 57 1e-08
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 46 2e-05
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 45 6e-05
5SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C... 30 1.1
6CN032_MOUSE (Q8BH93) Protein C14orf32 homolog 30 1.4
7PURL_LACLA (Q9CFE8) Phosphoribosylformylglycinamidine synthase I... 30 1.9
8PCDG1_PANTR (Q5DRC2) Protocadherin gamma A1 precursor (PCDH-gamm... 29 2.4
9PCDG1_HUMAN (Q9Y5H4) Protocadherin gamma A1 precursor (PCDH-gamm... 29 2.4
10ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1) 29 2.4
11ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1) 29 2.4
12ESR1_PAGMA (O42132) Estrogen receptor (ER) (Estradiol receptor) ... 28 4.2
13Y85K_SSV1 (P20210) Hypothetical 85.7 kDa protein (ORF C-792) 28 4.2
14EF1G_RABIT (P29694) Elongation factor 1-gamma (EF-1-gamma) (eEF-... 28 4.2
15BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-Co... 28 5.5
16ELN_MOUSE (P54320) Elastin precursor (Tropoelastin) 28 5.5
17EF1G_PIG (Q29387) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B... 28 5.5
18CUTI_MONFR (Q8TGB8) Cutinase precursor (EC 3.1.1.74) (Cutin hydr... 28 5.5
19EF1G_MOUSE (Q9D8N0) Elongation factor 1-gamma (EF-1-gamma) (eEF-... 28 5.5
20EF1G_HUMAN (P26641) Elongation factor 1-gamma (EF-1-gamma) (eEF-... 28 5.5
21SRBP1_HUMAN (P36956) Sterol regulatory element-binding protein 1... 28 7.1
22EF1G_RAT (Q68FR6) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B... 28 7.1
23HRPZ_PSESH (Q9F0B0) Harpin hrpZ (HrpZ-Psph protein) (Harpin-Psph) 28 7.1
24HRPZ_PSESG (Q52481) Harpin hrpZ (HrpZ-Psg protein) (Harpin-Psg) 28 7.1
25ZIC3_HUMAN (O60481) Zinc finger protein ZIC 3 (Zinc finger prote... 27 9.3
26ZIC3_MOUSE (Q62521) Zinc finger protein ZIC 3 (Zinc finger prote... 27 9.3
27Y148_CAMJE (Q9PIX9) UPF0102 protein Cj0148c 27 9.3
28Y144_CAMJR (Q5HX17) UPF0102 protein CJE0144 27 9.3
29Y051_MYCTU (Q10880) Hypothetical protein Rv0083/MT0090 27 9.3
30SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD... 27 9.3
31SOH1_ARATH (Q8VYB1) Probable mediator complex subunit SOH1 27 9.3
32ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop... 27 9.3
33SUF_DROME (P25991) Protein suppressor of forked 27 9.3
34PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 27 9.3
35SELD_GEOSL (Q74FK1) Selenide, water dikinase (EC 2.7.9.3) (Selen... 27 9.3

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
 Frame = +2

Query: 14  GTPTGRFTNGRTIADIIGEMLGQADYSPPFLAP------NTTGGALLNGVNYASGGAGIL 175
           G  TGRF+NGR  +D I + LG  +  P ++              LL GV++ASGGAG L
Sbjct: 160 GVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYL 219

Query: 176 NGTGRVFVNRIGMDVQVDYFNITRRQLDGLLGEDKAREFIHKKAIFSITVGSNDFLNNY 352
             T   +     +D Q+ YF   ++++  L+G+ K ++ + K A   +  GSND +  Y
Sbjct: 220 PQTSESWKVTTMLD-QLTYFQDYKKRMKKLVGKKKTKKIVSKGAAI-VVAGSNDLIYTY 276



to top

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
 Frame = +2

Query: 23  TGRFTNGRTIADIIGEMLGQADYSPPFLAPNTTGGALLNGVNYASGGAGILNGTGRVFVN 202
           TGRF+NG   +D + + +G  +  P +L P      LL GV++ASGGAG  N T     N
Sbjct: 242 TGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAG-YNPTTSEAAN 300

Query: 203 RIGMDVQVDYFNITRRQLDGLLGEDKAR---------EFIHKKAIFSITVGSNDFLNNY 352
            I M  Q+ YF     +++ L+ ++K++           +  K +  +  GSND +  Y
Sbjct: 301 AIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITY 359



to top

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
 Frame = +2

Query: 14  GTPTGRFTNGRTIADIIGEMLGQADYSPPFLAPNTTGGALLNGVNYASGGAGI--LNGTG 187
           G+P GR+ +GR + D I E LG   Y   FL  ++ G    +G N+A+ G+ I  LN T 
Sbjct: 61  GSPAGRYCDGRLVIDFIAESLG-LPYLSAFL--DSVGSNFSHGANFATAGSPIRALNSTL 117

Query: 188 RVF-VNRIGMDVQ-VDYFNI-----TRRQLDGLLGEDKAREFIHKKAIFSITVGSNDFLN 346
           R    +   +DVQ V ++N      T R   G+            KA+++  +G ND   
Sbjct: 118 RQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTA 177

Query: 347 NY 352
            Y
Sbjct: 178 GY 179



to top

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
 Frame = +2

Query: 23  TGRFTNGRTIADIIGEMLGQADYSPPFLAP--NTTGGALLNGVNYASGGAGILNGTGRV- 193
           TGR+++GR I D I E      ++ P+L+P  ++ G    +G ++A+ G+ I   T  + 
Sbjct: 68  TGRYSDGRLIIDFIAE-----SFNLPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIP 122

Query: 194 ---FVNRIGMDVQVDYFN--ITR----RQLDGLLGEDKAREFIHKKAIFSITVGSNDFLN 346
                +   +DVQ   F   I R    R+  G+  E    E+  +KA+++  +G ND   
Sbjct: 123 AHGGFSPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTE 182

Query: 347 NYL 355
            +L
Sbjct: 183 GFL 185



to top

>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4)
          Length = 1147

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -3

Query: 189 LPVPFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPSISPMMSAMVLPLVKRPVGVPP 10
           +P P  +P PP     P++  PP V   + G          P++ A+  P    P+G+PP
Sbjct: 658 IPKPLPVPVPPIPVPAPITVPPPQVPPHQPG---------PPVVGALQPPAFTPPLGIPP 708



to top

>CN032_MOUSE (Q8BH93) Protein C14orf32 homolog|
          Length = 242

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 135 SSAPPVVFGARNGGE*SAWPSISPMMSAMVLPLVKRPVGVPPEAA 1
           S+ PP V   + G     WP  SP  +    P +  P G+PP +A
Sbjct: 16  SAKPPAVTNTKAGHSSQGWPGSSPWSNPSAPPAM--PSGLPPSSA 58



to top

>PURL_LACLA (Q9CFE8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 739

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
 Frame = +2

Query: 59  IIGEMLGQADY-------SPPFLAPNTTGGALLNGVNYASGGAGILNGTGRVFVNRIGMD 217
           +IGE+ G+ D+       +  F+    T G + +  + A GG  I       F N +G+D
Sbjct: 603 LIGEISGRIDFDLETEKINQDFVLKAITDGLVSSAHDLAEGGLAIALAES-AFANGLGVD 661

Query: 218 VQVDYFN 238
           V+VD  N
Sbjct: 662 VKVDITN 668



to top

>PCDG1_PANTR (Q5DRC2) Protocadherin gamma A1 precursor (PCDH-gamma-A1)|
          Length = 931

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 180 PFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPS---ISPMMSAMVL 43
           PFS  APP+  +    +  P   G++NG +   WP+    + M+ AM+L
Sbjct: 804 PFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 852



to top

>PCDG1_HUMAN (Q9Y5H4) Protocadherin gamma A1 precursor (PCDH-gamma-A1)|
          Length = 931

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 180 PFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPS---ISPMMSAMVL 43
           PFS  APP+  +    +  P   G++NG +   WP+    + M+ AM+L
Sbjct: 804 PFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 852



to top

>ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 18/130 (13%)
 Frame = +2

Query: 23  TGRFTN--GRTIADIIGEMLG---------QADYSPPFLAPNTTG----GALLNGVNYAS 157
           T RFTN  G T  +  GE+ G         Q   +P  LA +T+       + +G N+A 
Sbjct: 55  TSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAV 114

Query: 158 GGAGILNGTGRVFVNRIGMDVQ-VDYFNITRRQLDGLLGEDKAREFI--HKKAIFSITVG 328
           GG      T +++ +    +   ++  N   R  DG L  D+AR+ +     A++ IT G
Sbjct: 115 GGYR----TDQIYDSITAANGSLIERDNTLLRSRDGYL-VDRARQGLGADPNALYYITGG 169

Query: 329 SNDFLNNYLM 358
            NDFL   ++
Sbjct: 170 GNDFLQGRIL 179



to top

>ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 18/130 (13%)
 Frame = +2

Query: 23  TGRFTN--GRTIADIIGEMLG---------QADYSPPFLAPNTTG----GALLNGVNYAS 157
           T RFTN  G T  +  GE+ G         Q   +P  LA +T+       + +G N+A 
Sbjct: 55  TSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAV 114

Query: 158 GGAGILNGTGRVFVNRIGMDVQ-VDYFNITRRQLDGLLGEDKAREFI--HKKAIFSITVG 328
           GG      T +++ +    +   ++  N   R  DG L  D+AR+ +     A++ IT G
Sbjct: 115 GGYR----TDQIYDSITAANGSLIERDNTLLRSRDGYL-VDRARQGLGADPNALYYITGG 169

Query: 329 SNDFLNNYLM 358
            NDFL   ++
Sbjct: 170 GNDFLQGRIL 179



to top

>ESR1_PAGMA (O42132) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 581

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 53  ADIIGEMLGQADYSPPFLAPNTTGGALLNGVNYASGGA 166
           AD   E   QAD  PPF + N++GG    G   +S G+
Sbjct: 514 ADRPAETWSQADREPPFTSRNSSGGGGGGGGGSSSAGS 551



to top

>Y85K_SSV1 (P20210) Hypothetical 85.7 kDa protein (ORF C-792)|
          Length = 792

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 8   SGGTPTGRFTNGRTIADIIGEMLGQADYSPPFLAPNTTGGALLNGVNYA 154
           S   P+G + +G+TI+  +   LG       + A N      +NGV++A
Sbjct: 368 SVNVPSGTYLSGQTISFTLSSFLGYPSGLGYYTAVNLIANVTINGVSHA 416



to top

>EF1G_RABIT (P29694) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)|
          Length = 436

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 104 LAPNTTGGALLNGVNYASGGAGILNGTGRVFVNRIGMDVQVDYFNITRRQLD 259
           L  N     +L G N +S  +GI    G+     +  D QVDY + T R+LD
Sbjct: 351 LRKNAFASVILFGTNNSSSISGIWVFRGQELAFPLSPDWQVDYESYTWRKLD 402



to top

>BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,|
           chloroplast precursor (BCCP)
          Length = 262

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = -3

Query: 186 PVPFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPSISPMMSAMVLPLVKRPVGVPP 10
           PVP S PAP  A  TP  ++ P V  A++        S+ P+ S M     + P    P
Sbjct: 155 PVPASTPAPTLARATPTPTSAPAVKSAKS--------SLPPLKSPMAGTFYRSPAPGEP 205



to top

>ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)|
          Length = 860

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 32  FTNGRTIADIIGEMLGQADYSPPFLAPNTTGGALLNGVNYASGGAGILNGTG 187
           +TNG+    + G   G+A Y       +    A      Y +GGAG+L G G
Sbjct: 284 YTNGKLPYGVAGAG-GKAGYPTGTGVGSQAAAAAAKAAKYGAGGAGVLPGVG 334



to top

>EF1G_PIG (Q29387) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)|
           (Fragment)
          Length = 432

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 104 LAPNTTGGALLNGVNYASGGAGILNGTGRVFVNRIGMDVQVDYFNITRRQLD 259
           L  N     +L G N +S  +G+    G+     +  D QVDY + T R+LD
Sbjct: 347 LRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLD 398



to top

>CUTI_MONFR (Q8TGB8) Cutinase precursor (EC 3.1.1.74) (Cutin hydrolase)|
          Length = 201

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +2

Query: 2   AASGGTPTGRFTNGRTIADIIGEMLGQADYSPPFLAP--NTTGGAL-LNGVNYASGGAGI 172
           A +  T T  F  G T    +G ++G     P FLA   ++ GG++ +NGV YA+   G 
Sbjct: 28  ARACSTVTVIFARGTTETPTLGTVIG-----PQFLAALKSSFGGSVTMNGVPYAADVPGF 82

Query: 173 LNG 181
           L G
Sbjct: 83  LKG 85



to top

>EF1G_MOUSE (Q9D8N0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)|
          Length = 436

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 104 LAPNTTGGALLNGVNYASGGAGILNGTGRVFVNRIGMDVQVDYFNITRRQLD 259
           L  N     +L G N +S  +G+    G+     +  D QVDY + T R+LD
Sbjct: 351 LRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLD 402



to top

>EF1G_HUMAN (P26641) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)|
          Length = 436

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 104 LAPNTTGGALLNGVNYASGGAGILNGTGRVFVNRIGMDVQVDYFNITRRQLD 259
           L  N     +L G N +S  +G+    G+     +  D QVDY + T R+LD
Sbjct: 351 LRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLD 402



to top

>SRBP1_HUMAN (P36956) Sterol regulatory element-binding protein 1 (SREBP-1)|
           (Sterol regulatory element-binding transcription factor
           1)
          Length = 1147

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 21/60 (35%), Positives = 26/60 (43%)
 Frame = -3

Query: 189 LPVPFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPSISPMMSAMVLPLVKRPVGVPP 10
           LP  F  PAPP       SS P + + +  GG  +  P  +       LPL   P GVPP
Sbjct: 145 LPQSFPAPAPPQ-----FSSTPVLGYPSPPGGFSTGSPPGNTQQPLPGLPLAS-PPGVPP 198



to top

>EF1G_RAT (Q68FR6) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)|
          Length = 436

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 104 LAPNTTGGALLNGVNYASGGAGILNGTGRVFVNRIGMDVQVDYFNITRRQLD 259
           L  N     +L G N +S  +G+    G+     +  D QVDY + T R+LD
Sbjct: 351 LRKNAFASVILFGTNNSSSISGVWVFRGQDLAFPLSPDWQVDYESYTWRKLD 402



to top

>HRPZ_PSESH (Q9F0B0) Harpin hrpZ (HrpZ-Psph protein) (Harpin-Psph)|
          Length = 345

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 14  GTPTGRFTNGRTIADIIGEMLGQADYSPPFLAPNTTGGALLNGVNYASGGAGIL 175
           G  T +F   R+  DIIG+ LG    +   LA +++GG L + V+      G L
Sbjct: 180 GDETAQF---RSALDIIGQQLGSQQNAAGGLAGDSSGGGLGSPVSNTENSPGSL 230



to top

>HRPZ_PSESG (Q52481) Harpin hrpZ (HrpZ-Psg protein) (Harpin-Psg)|
          Length = 345

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 14  GTPTGRFTNGRTIADIIGEMLGQADYSPPFLAPNTTGGALLNGVNYASGGAGIL 175
           G  T +F   R+  DIIG+ LG    +   LA +++GG L + V+      G L
Sbjct: 180 GDETAQF---RSALDIIGQQLGSQQNAAGGLAGDSSGGGLGSPVSNTENSPGSL 230



to top

>ZIC3_HUMAN (O60481) Zinc finger protein ZIC 3 (Zinc finger protein of the|
           cerebellum 3)
          Length = 467

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 17  TPTGRFTNGRTIADIIGEMLGQADYSPPFLAPNT 118
           +PTG   N +    + GE+ G+AD   P  +P T
Sbjct: 174 SPTGHVDNNQVHLGLRGELFGRADPYRPVASPRT 207



to top

>ZIC3_MOUSE (Q62521) Zinc finger protein ZIC 3 (Zinc finger protein of the|
           cerebellum 3)
          Length = 466

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 17  TPTGRFTNGRTIADIIGEMLGQADYSPPFLAPNT 118
           +PTG   N +    + GE+ G+AD   P  +P T
Sbjct: 173 SPTGHVDNNQVHLGLRGELFGRADPYRPVASPRT 206



to top

>Y148_CAMJE (Q9PIX9) UPF0102 protein Cj0148c|
          Length = 112

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 254 LDGLLGEDKAREFIHKK 304
           LDG+LGEDKA +F+ K+
Sbjct: 7   LDGILGEDKACKFLKKQ 23



to top

>Y144_CAMJR (Q5HX17) UPF0102 protein CJE0144|
          Length = 112

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 254 LDGLLGEDKAREFIHKK 304
           LDG+LGEDKA +F+ K+
Sbjct: 7   LDGILGEDKACKFLKKQ 23



to top

>Y051_MYCTU (Q10880) Hypothetical protein Rv0083/MT0090|
          Length = 640

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 107 APNTTGGALLNGVNYASGGAGILNGTGRVFVNRIGMDVQVDYFNITRRQLDG 262
           A  T GG + +GV  A  G G+L   G V V  +G  + +   +I   +L G
Sbjct: 3   AAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGG 54



to top

>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 186 PVPFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPSISPMMSAMVLPLVKRPVGVPP 10
           PVP  +PA P     P++  PP V   + G          P++ A+  P    P+G+PP
Sbjct: 575 PVPVPVPALPVP--APITVPPPQVPPHQPG---------PPVVGALQPPAFTPPLGIPP 622



to top

>SOH1_ARATH (Q8VYB1) Probable mediator complex subunit SOH1|
          Length = 196

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -3

Query: 204 RFTNTLPVPFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPSISPMMSAM 49
           R  + LP P   P PP     P +S PP           SA  ++SP +S M
Sbjct: 126 RLKHILPRPLPEPVPPQPPVAPSTSLPPAP---------SATAALSPALSPM 168



to top

>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 210 PIRFTNTLPVPFSIPAPPDA*FTPLSSAPPVVFGA 106
           P  F  + P P SIP  P++ F P  S PP  + A
Sbjct: 161 PPLFPPSPPPPDSIPRQPESGFEPHPSVPPTGYHA 195



to top

>SUF_DROME (P25991) Protein suppressor of forked|
          Length = 733

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -2

Query: 283 RLVLAQQAVQLPPRDVE---VVHLHVHADPVHE 194
           RLV AQQ V+L P D+E   V+       P+HE
Sbjct: 18  RLVRAQQVVELRPYDIESWSVMIREAQTRPIHE 50



to top

>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/64 (25%), Positives = 25/64 (39%)
 Frame = -3

Query: 201 FTNTLPVPFSIPAPPDA*FTPLSSAPPVVFGARNGGE*SAWPSISPMMSAMVLPLVKRPV 22
           FT   P P      P   + P++  PP+V            P ++P   +   P+V  P+
Sbjct: 136 FTPKPPSPIPPIVSPPIVYPPITPTPPIVH-----------PPVTPKPPSPTPPIVSPPI 184

Query: 21  GVPP 10
             PP
Sbjct: 185 VYPP 188



to top

>SELD_GEOSL (Q74FK1) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate|
           synthetase) (Selenium donor protein)
          Length = 345

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 5   ASGGTPTGRFTNGRTIADIIGEMLGQADYSPPFLAPNTTGGALLN 139
           A G  P G + N    A  +G      D   P   P T+GG LL+
Sbjct: 264 ADGLVPAGCYRNRDHYAPFVGAPRSDDDRLLPLFDPQTSGGLLLS 308


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,384,920
Number of Sequences: 219361
Number of extensions: 641017
Number of successful extensions: 2672
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2662
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top