>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  829 bits (418), Expect = 0.0
 Identities = 421/422 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    cagaacaggtgcctataataaataattctgttctagtagtccaggatctattgaattgtg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2620 cagaacaggtgcctataataaataattctgttctagtagtccaggatctattgaattgtg 2679

                                                                        
Query: 61   agaggtagccatggacaagatttcagcacctttctttagtggtacgagtcctgctgctgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2680 agaggtagccatggacaagatttcagcacctttctttagtggtacgagtcctgctgctgc 2739

                                                                        
Query: 121  tagtgtcgccggagtggatgaggacgataggctgtgcttccaagcgcaagagctcatgtt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2740 tagtgtcgccggagtggatgaggacgataggctgtgcttccaagcgcaagagctcatgtt 2799

                                                                        
Query: 181  tgcctacaacatctccatggtgctcagagcaaccatccagctgggcctcctagacgcact 240
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2800 tgcctacaacatctccatggtgctcagagcagccatccagctgggcctcctagacgcact 2859

                                                                        
Query: 241  cagtgcggctggtggcaaggcgctgacccccaacgagctcgtagagaacgtggagacaag 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2860 cagtgcggctggtggcaaggcgctgacccccaacgagctcgtagagaacgtggagacaag 2919

                                                                        
Query: 301  cagcaacaaggccgaggcggcggctgcggtggaccgtatcctcaggtacctctcctgctt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2920 cagcaacaaggccgaggcggcggctgcggtggaccgtatcctcaggtacctctcctgctt 2979

                                                                        
Query: 361  caacgtggtgacctgctcttcggaggcagcaggccctgacggcacacttgtgcggcgata 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2980 caacgtggtgacctgctcttcggaggcagcaggccctgacggcacacttgtgcggcgata 3039

              
Query: 421  ca 422
            ||
Sbjct: 3040 ca 3041

>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 375 gctcttcggaggcagcaggccctgacggcacacttgtgcggcgataca 422
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gctcttcggaggcagcaggccctgacggcacacttgtgcggcgataca 48

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 164     gcgcaagagctcatgtttgcctacaacatctccatggtgctcagagcaaccatccagctg 223
               ||||| |||||| |||| |||||||||  ||||||||||||  ||||  | |||||||||
Sbjct: 5171173 gcgcaggagctcgtgttcgcctacaaccgctccatggtgctgcgagcggcgatccagctg 5171232

                             
Query: 224     ggcctcctagacgc 237
               |||||||| |||||
Sbjct: 5171233 ggcctcctcgacgc 5171246



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 164     gcgcaagagctcatgtttgcctacaacatctccatggtgctcagagc 210
               |||||||| ||||||||||||||||||  ||||||||| || |||||
Sbjct: 5363496 gcgcaagaactcatgtttgcctacaaccgctccatggtcctgagagc 5363542

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 164     gcgcaagagctcatgtttgcctacaacatctccatggtgctcagagcaaccatccagctg 223
               ||||| |||||| |||| |||||||||  ||||||||||||  ||||  | |||||||||
Sbjct: 5171155 gcgcaggagctcgtgttcgcctacaaccgctccatggtgctgcgagcggcgatccagctg 5171214

                             
Query: 224     ggcctcctagacgc 237
               |||||||| |||||
Sbjct: 5171215 ggcctcctcgacgc 5171228



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 164     gcgcaagagctcatgtttgcctacaacatctccatggtgctcagagc 210
               |||||||| ||||||||||||||||||  ||||||||| || |||||
Sbjct: 5363485 gcgcaagaactcatgtttgcctacaaccgctccatggtcctgagagc 5363531

>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 164   gcgcaagagctcatgtttgcctacaacatctccatggtgctcagagcaaccatccagctg 223
             ||||| |||||| |||| |||||||||  ||||||||||||  ||||  | |||||||||
Sbjct: 92426 gcgcaggagctcgtgttcgcctacaaccgctccatggtgctgcgagcggcgatccagctg 92367

                           
Query: 224   ggcctcctagacgc 237
             |||||||| |||||
Sbjct: 92366 ggcctcctcgacgc 92353

>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 164   gcgcaagagctcatgtttgcctacaacatctccatggtgctcagagc 210
             |||||||| ||||||||||||||||||  ||||||||| || |||||
Sbjct: 35563 gcgcaagaactcatgtttgcctacaaccgctccatggtcctgagagc 35609

>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
              Nipponbare of ssp. japonica of Oryza sativa (rice),
              complete sequence
          Length = 141841

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 164    gcgcaagagctcatgtttgcctacaacatctccatggtgctcagagc 210
              |||||||| ||||||||||||||||||  ||||||||| || |||||
Sbjct: 102312 gcgcaagaactcatgtttgcctacaaccgctccatggtcctgagagc 102266

>gb|AY518220.1| Oryza sativa (indica cultivar-group) NBS-LRR-like protein A (NL-A),
            NBS-LRR-like protein B (NL-B), NBS-LRR-like protein C
            (NL-C), and NBS-LRR-like protein D (NL-D) genes, complete
            cds
          Length = 73617

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 311  gccgaggcggcggctgcggtgg 332
            ||||||||||||||||||||||
Sbjct: 2756 gccgaggcggcggctgcggtgg 2777

>emb|AL162426.20| Human DNA sequence from clone RP11-56D16 on chromosome 9 Contains the
             STXBP1 gene for syntaxin binding protein 1
             (UNC18,hUNC18,MUNC18-1), two novel genes, a novel gene
             (LOC138428), the gene for a novel protien (LOC286207), the
             gene for anovel protein (FLJ32780), the TOR2A gene for
             torsin family 2, member A (FLJ14771), the 3' end of the
             SH2D3C gene for SH2 domain containing 3C (CHAT,NSP3) and
             five CpG islands, complete sequence
          Length = 163338

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 149   aggctgtgcttccaagcgcaagagct 174
             ||||||||||||||||| ||||||||
Sbjct: 60628 aggctgtgcttccaagcccaagagct 60653

>gb|AC116778.9| Mus musculus chromosome 1, clone RP24-481H3, complete sequence
          Length = 132180

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    aggtagccatggacaagattt 83
             |||||||||||||||||||||
Sbjct: 63118 aggtagccatggacaagattt 63138

>gb|AC164010.2| Mus musculus chromosome 18, clone RP24-391C15, complete sequence
          Length = 162585

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    cctataataaataattctgtt 32
             |||||||||||||||||||||
Sbjct: 67628 cctataataaataattctgtt 67648

>ref|NM_170325.1| Drosophila melanogaster CG31064-RA, transcript variant A (CG31064),
            mRNA
          Length = 3084

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 311  gccgaggcggcggctgcggtg 331
            |||||||||||||||||||||
Sbjct: 2087 gccgaggcggcggctgcggtg 2107

>ref|NM_143288.2| Drosophila melanogaster CG31064-RE, transcript variant E (CG31064),
            mRNA
          Length = 3628

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 311  gccgaggcggcggctgcggtg 331
            |||||||||||||||||||||
Sbjct: 2634 gccgaggcggcggctgcggtg 2654

>gb|AY051617.1| Drosophila melanogaster GH26613 full length cDNA
          Length = 2963

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 311  gccgaggcggcggctgcggtg 331
            |||||||||||||||||||||
Sbjct: 1956 gccgaggcggcggctgcggtg 1976

>gb|AC109243.10| Mus musculus chromosome 18, clone RP23-139O19, complete sequence
          Length = 186687

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 12     cctataataaataattctgtt 32
              |||||||||||||||||||||
Sbjct: 156139 cctataataaataattctgtt 156159

>gb|AC009848.9|AC009848 Drosophila melanogaster, chromosome 3R, region 97E-98A, BAC clone
             BACR02B05, complete sequence
          Length = 189694

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 311   gccgaggcggcggctgcggtg 331
             |||||||||||||||||||||
Sbjct: 45889 gccgaggcggcggctgcggtg 45869

>gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97 of 118 of the complete
              sequence
          Length = 222554

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 311    gccgaggcggcggctgcggtg 331
              |||||||||||||||||||||
Sbjct: 215220 gccgaggcggcggctgcggtg 215200

>ref|XM_745088.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g04330)
           partial mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 gtcgccggagtggatgagga 144
           ||||||||||||||||||||
Sbjct: 291 gtcgccggagtggatgagga 272

>gb|AY427607.1| Mus musculus map chrx_207.1 peptidylprolyl isomerase A (Ppia)
           pseudogene, complete sequence
          Length = 697

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 68  gccatggacaagatttcagcacct 91
           ||||||||||||||||||| ||||
Sbjct: 319 gccatggacaagatttcaggacct 296

>gb|AC146480.2| Danio rerio clone CH211-40O9, complete sequence
          Length = 166906

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ataataaataattctgttct 34
              ||||||||||||||||||||
Sbjct: 128127 ataataaataattctgttct 128146

>ref|NG_005274.1| Mus musculus peptidylprolyl isomerase A pseudogene x_207.1
           (Ppia-psx_207.1) on chromosome X
          Length = 697

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 68  gccatggacaagatttcagcacct 91
           ||||||||||||||||||| ||||
Sbjct: 319 gccatggacaagatttcaggacct 296

>emb|AL160400.20| Human DNA sequence from clone RP11-367G6 on chromosome 6 Contains a
            peptidylprolyl isomerase A (cyclophilin A) (PPIA)
            pseudogene and an argininosuccinate synthetase (ASS)
            (ASS1,CTLN1) pseudogene, complete sequence
          Length = 58408

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 68   gccatggacaagatttcagcacct 91
            ||||||||||||||||||| ||||
Sbjct: 3766 gccatggacaagatttcaggacct 3743

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    gcaacaaggccgaggcggcg 322
              ||||||||||||||||||||
Sbjct: 498841 gcaacaaggccgaggcggcg 498860

>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24
              Contains part of a novel gene similar to human DECR2
              (peroxisomal 2,4-dienoyl CoA reductase 2),  a novel gene
              similar to human KIAA0665, a novel gene similar to human
              KIAA0683, a novel gene similar to human KIAA0590, part of a
              novel gene and three CpG islands, complete sequence
          Length = 161218

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     tgcctataataaataattct 29
              ||||||||||||||||||||
Sbjct: 109601 tgcctataataaataattct 109620

>emb|BX569781.7| Zebrafish DNA sequence from clone DKEY-72L18 in linkage group 17,
              complete sequence
          Length = 170138

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    catgtttgcctacaacatct 194
              ||||||||||||||||||||
Sbjct: 133275 catgtttgcctacaacatct 133294

>ref|NR_000030.1| Homo sapiens peptidylprolyl isomerase A processed pseudogene
           (LOC134997) on chromosome 6
          Length = 811

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 68  gccatggacaagatttcagcacct 91
           ||||||||||||||||||| ||||
Sbjct: 409 gccatggacaagatttcaggacct 386

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 314      gaggcggcggctgcggtgga 333
                ||||||||||||||||||||
Sbjct: 20905653 gaggcggcggctgcggtgga 20905634

>gb|AC024261.6|AC024261 Arabidopsis thaliana chromosome 1 BAC F5D21 genomic sequence, complete
             sequence
          Length = 92652

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   catgtttgcctacaacatct 194
             ||||||||||||||||||||
Sbjct: 83981 catgtttgcctacaacatct 84000

>gb|AE004715.1| Pseudomonas aeruginosa PAO1, section 276 of 529 of the complete
            genome
          Length = 10189

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 311  gccgaggcggcggctgcggt 330
            ||||||||||||||||||||
Sbjct: 7650 gccgaggcggcggctgcggt 7669

>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0090E14
          Length = 161119

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   gaggcggcggctgcggtgga 333
             ||||||||||||||||||||
Sbjct: 32577 gaggcggcggctgcggtgga 32558

>emb|AL929558.13| Zebrafish DNA sequence from clone CH211-159N7, complete sequence
          Length = 170597

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ataataaataattctgttct 34
              ||||||||||||||||||||
Sbjct: 128082 ataataaataattctgttct 128101

>emb|BX548010.5| Mouse DNA sequence from clone RP23-22P24 on chromosome X, complete
             sequence
          Length = 192853

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    gccatggacaagatttcagcacct 91
             ||||||||||||||||||| ||||
Sbjct: 44804 gccatggacaagatttcaggacct 44827

>emb|AJ328716.1|HSA328716 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NB5R
          Length = 680

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ggccgaggcggcggctgcgg 329
           ||||||||||||||||||||
Sbjct: 51  ggccgaggcggcggctgcgg 32

>emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 in linkage group 24,
              complete sequence
          Length = 188067

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     tgcctataataaataattct 29
              ||||||||||||||||||||
Sbjct: 153864 tgcctataataaataattct 153845


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,340,379
Number of Sequences: 3902068
Number of extensions: 4340379
Number of successful extensions: 78486
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78310
Number of HSP's gapped (non-prelim): 176
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)