ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet31d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment) 28 5.9

>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 5   AGGGHQD*GAVVASLVGPGERSWEGLRAEMAGR 103
           AG G Q  GA  A+  G G+R + GL  + AGR
Sbjct: 395 AGRGGQGAGAAAAAAGGAGQRGYGGLGNQGAGR 427


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,320,483
Number of Sequences: 219361
Number of extensions: 284040
Number of successful extensions: 844
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top