ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet31c02 |
|---|---|
| Clone Library Name | barley_pub |
>TRXL6_ARATH (Q8LCT3) Thioredoxin-like 6, chloroplast precursor| Length = 236 Score = 38.1 bits (87), Expect = 0.010 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +2 Query: 248 AEKEKAKSGDKDE-RVVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLS 424 AE E K +++ +V +HS EEF AL A RLV+VEF + + + ++P + + Sbjct: 90 AETEPPKWWERNAPNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTA 149 Query: 425 RTCGDVDFL 451 D+ FL Sbjct: 150 VEHPDIVFL 158
>TRXL2_ARATH (Q8LEK4) Thioredoxin-like 2, chloroplast precursor| Length = 221 Score = 35.0 bits (79), Expect = 0.086 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 2/128 (1%) Frame = +2 Query: 74 SASMASTPQLLGHLAGSTATASLSVTPVSGGGSSKVRFLPXXXXXXXXXXXXXXXXSGAE 253 S+S +T L+G+L S+ SLSV KV+ L AE Sbjct: 48 SSSSLTTSSLIGNLVFSSRNQSLSV---------KVQAL------------------AAE 80 Query: 254 KEKAKSGDKDE--RVVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSR 427 E+ K ++ ++ + SAE+F AL+ A +RLV+V+F + + + ++P + ++ Sbjct: 81 TEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAK 140 Query: 428 TCGDVDFL 451 ++ FL Sbjct: 141 EHPNILFL 148
>THIO2_DROME (Q9V429) Thioredoxin 2 (DmTrx-2)| Length = 114 Score = 34.7 bits (78), Expect = 0.11 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +2 Query: 278 KDERVVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGD 439 +D + H + DG L KA +LVV++F A+ K I P +V+LS D Sbjct: 6 RDSTNLHFHLQADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD 59
>THIO_GEOCY (O96952) Thioredoxin| Length = 106 Score = 34.3 bits (77), Expect = 0.15 Identities = 18/45 (40%), Positives = 29/45 (64%) Frame = +2 Query: 314 EFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDF 448 +FD AL+ A ++LVV++F AS +RI P V++++ DV F Sbjct: 10 DFDQALKDAGDKLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIF 54
>THIO_CALJA (Q9BDJ3) Thioredoxin| Length = 104 Score = 33.5 bits (75), Expect = 0.25 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S + F AL A ++LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIDSKDAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFL 54
>THIO_HORSE (O97508) Thioredoxin| Length = 104 Score = 33.1 bits (74), Expect = 0.33 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F AL A +LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIESKSAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFL 54
>TXND2_HUMAN (Q86VQ3) Thioredoxin domain-containing protein 2| (Spermatid-specific thioredoxin-1) (Sptrx-1) Length = 553 Score = 33.1 bits (74), Expect = 0.33 Identities = 21/66 (31%), Positives = 36/66 (54%) Frame = +2 Query: 254 KEKAKSGDKDERVVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTC 433 +E+ + ++V + S E+F+ +L++A RLV V+F+A+ + I P LS Sbjct: 438 EEETMEFPEGDKVKVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIRPFFHALSVKH 497 Query: 434 GDVDFL 451 DV FL Sbjct: 498 EDVVFL 503
>THIO_PONPY (Q5R9M3) Thioredoxin| Length = 105 Score = 32.7 bits (73), Expect = 0.43 Identities = 21/54 (38%), Positives = 28/54 (51%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F AL A ++LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFL 54
>THIO_MACMU (P29451) Thioredoxin| Length = 104 Score = 32.7 bits (73), Expect = 0.43 Identities = 21/54 (38%), Positives = 28/54 (51%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F AL A ++LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIESKAAFQEALDDAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFL 54
>THIO_HUMAN (P10599) Thioredoxin (ATL-derived factor) (ADF) (Surface-associated| sulphydryl protein) (SASP) Length = 104 Score = 32.7 bits (73), Expect = 0.43 Identities = 21/54 (38%), Positives = 28/54 (51%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F AL A ++LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFL 54
>TRXH1_ARATH (P29448) Thioredoxin H-type 1 (TRX-H-1)| Length = 114 Score = 32.3 bits (72), Expect = 0.56 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = +2 Query: 278 KDERVVQVHSAEEFDGALQKAKNR--LVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 ++ +V+ H+ E ++ LQKA LVVV+F AS + I P DL++ +V FL Sbjct: 4 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFL 63
>THIO_SHEEP (P50413) Thioredoxin| Length = 104 Score = 32.3 bits (72), Expect = 0.56 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F AL A +LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFL 54
>THIO_PIG (P82460) Thioredoxin| Length = 104 Score = 32.3 bits (72), Expect = 0.56 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F AL A +LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFL 54
>THIO_BOVIN (O97680) Thioredoxin| Length = 104 Score = 32.3 bits (72), Expect = 0.56 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F AL A +LVVV+F+A+ K I P LS +V FL Sbjct: 1 VKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFL 54
>TRX1_YEAST (P22217) Thioredoxin I (TR-I) (Thioredoxin 2)| Length = 102 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDF 448 V Q +A EFD A+ A+++LVVV+F A+ K I P + S DF Sbjct: 1 VTQFKTASEFDSAI--AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADF 51
>THIO_CHICK (P08629) Thioredoxin| Length = 104 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V V + +F+ L+ A +LVVV+F+A+ K I P L GDV F+ Sbjct: 1 VKSVGNLADFEAELKAAGEKLVVVDFSATWCGPCKMIKPFFHSLCDKFGDVVFI 54
>TXND8_RAT (Q69AB1) Thioredoxin domain-containing protein 8| (Spermatid-specific thioredoxin-3) (Sptrx-3) Length = 127 Score = 30.8 bits (68), Expect = 1.6 Identities = 21/53 (39%), Positives = 26/53 (49%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDF 448 V ++ S EF L A NRLVVVEF+A K I P +S +V F Sbjct: 2 VQKIKSMREFKELLGAAGNRLVVVEFSAQWCGPCKMIAPAFQAMSLQYRNVMF 54
>THIO_ICTPU (Q9DGI3) Thioredoxin| Length = 107 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRT 430 VV + + F AL+ A ++LVVV+F A+ ++I P LS++ Sbjct: 2 VVHIENLNAFSAALKNAGDKLVVVDFTATWCGPCQKIGPIFETLSKS 48
>THIO_RABIT (P08628) Thioredoxin| Length = 104 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V Q+ S F L A ++LVVV+F+A+ K I P LS +V F+ Sbjct: 1 VKQIESKSAFQEVLDSAGDKLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFI 54
>TRXL1_ARATH (O64654) Thioredoxin-like 1| Length = 275 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/69 (28%), Positives = 36/69 (52%) Frame = +2 Query: 245 GAEKEKAKSGDKDERVVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLS 424 G ++ + G KD + ++ SA+E +L A ++LVVV+F + K ++P + + Sbjct: 85 GTAQKWWEKGLKDN-MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFA 143 Query: 425 RTCGDVDFL 451 DV FL Sbjct: 144 EMNPDVQFL 152
>TXND2_MOUSE (Q6P902) Thioredoxin domain-containing protein 2| (Spermatid-specific thioredoxin-1) (Sptrx-1) (Thioredoxin-4) Length = 515 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/69 (33%), Positives = 33/69 (47%) Frame = +2 Query: 245 GAEKEKAKSGDKDERVVQVHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLS 424 GAE E + G V + EEF+ L+ A +LV V+F+A+ + + P LS Sbjct: 401 GAEIETLEEG----LVRVIKDKEEFEEVLKDAGEKLVAVDFSAAWCGPCRMMKPLFHSLS 456 Query: 425 RTCGDVDFL 451 DV FL Sbjct: 457 LKHEDVIFL 465
>TRXH2_ARATH (Q38879) Thioredoxin H-type 2 (TRX-H-2)| Length = 133 Score = 29.6 bits (65), Expect = 3.6 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +2 Query: 242 SGAEKEKAKSGDKDERVVQVHSAEEFDGALQKAK--NRLVVVEFAASHSVNSKRIYPCMV 415 SG + A + + RV++ S+ + + K N+L+VV+F+AS + I P + Sbjct: 11 SGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIH 70 Query: 416 DLSRTCGDVDFL 451 ++ DVDF+ Sbjct: 71 AMADKFNDVDFV 82
>TRXH_ORYSA (Q42443) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1)| Length = 122 Score = 29.6 bits (65), Expect = 3.6 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKAK--NRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V+ H+ +EFD + KAK ++V+++F AS + I P + ++ FL Sbjct: 8 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL 63
>THIO_RAT (P11232) Thioredoxin| Length = 104 Score = 29.3 bits (64), Expect = 4.7 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 299 VHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 + S E F AL A ++LVVV+F+A+ K I P L +V FL Sbjct: 4 IESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFL 54
>THIO_MOUSE (P10639) Thioredoxin (ATL-derived factor) (ADF)| Length = 104 Score = 29.3 bits (64), Expect = 4.7 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 299 VHSAEEFDGALQKAKNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 + S E F AL A ++LVVV+F+A+ K I P L +V FL Sbjct: 4 IESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFL 54
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 337 GQEPAGG--GGVRGEPQREQQAHLPVHGGPEPHLRRRGLP 450 G++PA G GG +G P ++ GP P RRG+P Sbjct: 903 GRKPARGVGGGGQGPPPPRRENRTETRWGPRPGSCRRGIP 942
>TRXH_PICMA (O65049) Thioredoxin H-type (TRX-H)| Length = 125 Score = 29.3 bits (64), Expect = 4.7 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = +2 Query: 290 VVQVHSAEEFDGALQKA--KNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDVDFL 451 V HS E + LQ+A RLV V+F A+ + I P V+LS+ ++ FL Sbjct: 6 VFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFL 61
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 28.9 bits (63), Expect = 6.2 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 337 GQEPAGG--GGVRGEPQREQQAHLPVHGGPEPHLRRRGLP 450 G++PA G G +G P +++ GP P RRG+P Sbjct: 899 GRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIP 938
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 28.9 bits (63), Expect = 6.2 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 337 GQEPAGG--GGVRGEPQREQQAHLPVHGGPEPHLRRRGLP 450 G++PA G G +G P +++ GP P RRG+P Sbjct: 902 GRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIP 941
>RAD_HUMAN (P55042) GTP-binding protein RAD (RAS associated with diabetes)| (RAD1) Length = 308 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 349 AGGGGVRGEPQREQQAHLPVHGGPEPHLRRRGLP 450 +G GG RG Q ++ GP P L RR +P Sbjct: 8 SGAGGSRGGGQERERRRGSTPWGPAPPLHRRSMP 41
>PRDM8_HUMAN (Q9NQV8) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 689 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 337 GQEPAGGGGVRGEPQREQQAHLPVHGGPE 423 G + GGGG G+ Q++QQ P+ GP+ Sbjct: 198 GTKDHGGGGGGGKDQQQQQQEAPLGPGPK 226
>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog| Length = 328 Score = 28.5 bits (62), Expect = 8.1 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +3 Query: 78 HQWRPPHSFLGTSPAPPPQP 137 HQ++PP++ PA PPQP Sbjct: 90 HQYQPPYASAQPRPAAPPQP 109
>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog| Length = 328 Score = 28.5 bits (62), Expect = 8.1 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +3 Query: 78 HQWRPPHSFLGTSPAPPPQP 137 HQ++PP++ PA PPQP Sbjct: 90 HQYQPPYASAQPRPAAPPQP 109
>HRCA_CAUCR (P54305) Heat-inducible transcription repressor hrcA| Length = 358 Score = 28.5 bits (62), Expect = 8.1 Identities = 20/54 (37%), Positives = 27/54 (50%) Frame = +2 Query: 32 AIFSRLLLD*ARPVSASMASTPQLLGHLAGSTATASLSVTPVSGGGSSKVRFLP 193 AI +RL + R ++A +L LAG A + VTPV GG V F+P Sbjct: 106 AIEARLAVK-GRSFEEALAEASSILSGLAGG---AGIVVTPVREGGVKHVEFVP 155
>TRXH1_TOBAC (P29449) Thioredoxin H-type 1 (TRX-H1)| Length = 126 Score = 28.5 bits (62), Expect = 8.1 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +2 Query: 269 SGDKDERVVQVHSAEEFDGALQKA--KNRLVVVEFAASHSVNSKRIYPCMVDLSRTCGDV 442 + ++ +V H EE++ +K +LVVV+F AS + I P + D+++ V Sbjct: 7 TSSEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHV 66 Query: 443 DFL 451 FL Sbjct: 67 IFL 69
>ILV5_PEA (O82043) Ketol-acid reductoisomerase, chloroplast precursor (EC| 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 581 Score = 28.5 bits (62), Expect = 8.1 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = +2 Query: 2 AASQQECSLAAIFSRLLLD*ARPVSASMASTPQLLGHLAGSTATASLSVTPVSGGGSSKV 181 AA CS A S L A+PV+AS A T L+ + A S+T S G++KV Sbjct: 2 AAVTSSCSTAISASSKTL--AKPVAASFAPTNLSFSKLSPQSIRARRSITVGSALGATKV 59 Query: 182 RFLP 193 P Sbjct: 60 SAPP 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,682,791 Number of Sequences: 219361 Number of extensions: 714374 Number of successful extensions: 3943 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3439 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3931 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
