ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet31c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 56 4e-08
2VTS1_SCHPO (Q9P6R7) Protein vts1 34 0.16
3ZN395_HUMAN (Q9H8N7) Zinc finger protein 395 (Papillomavirus-bin... 34 0.21
4ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt... 33 0.28
5HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li... 33 0.47
6VIF_BIV27 (P19563) Virion infectivity factor (Q protein) 33 0.47
7VIF_BIV06 (P19562) Virion infectivity factor (Q protein) 33 0.47
8NFI_STRCO (Q9X7N2) Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'... 32 1.0
9GAG_SFV3L (P27400) Gag polyprotein (Core polyprotein) 31 1.4
10RGNEF_MOUSE (P97433) Rho-guanine nucleotide exchange factor (Rho... 31 1.4
11NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) 31 1.8
12TTHY_RANCA (P31779) Transthyretin precursor (Prealbumin) (Tadpol... 30 2.3
13TRME_PSESM (Q87TS2) tRNA modification GTPase trmE 30 3.1
14SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2... 30 3.1
15NU2M_MAMPR (Q38PS1) NADH-ubiquinone oxidoreductase chain 2 (EC 1... 30 4.0
16SMAD1_MOUSE (P70340) Mothers against decapentaplegic homolog 1 (... 30 4.0
17Y959_METJA (Q58369) Putative aminotransferase MJ0959 (EC 2.6.1.-) 30 4.0
18RLA0_PYRHO (O74109) Acidic ribosomal protein P0 homolog (L10E) 30 4.0
19SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Sh... 30 4.0
20RLA0_PYRAB (Q9UXS5) Acidic ribosomal protein P0 homolog (L10E) 29 5.2
21RL2_MYCGA (O52335) 50S ribosomal protein L2 29 5.2
22ALEU_HORVU (P05167) Thiol protease aleurain precursor (EC 3.4.22... 29 6.8
23NBEA_HUMAN (Q8NFP9) Protein neurobeachin (Lysosomal trafficking ... 29 6.8
24CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit... 29 6.8
25PALM_HUMAN (O75781) Paralemmin 29 6.8
26PHP_DROME (P39769) Polyhomeotic-proximal chromatin protein 28 8.9
27RL2_MYCPE (Q8EUB6) 50S ribosomal protein L2 28 8.9
28CHDM_DROME (O97159) Chromodomain helicase-DNA-binding protein Mi... 28 8.9
29BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless h... 28 8.9
30SPEG_RAT (Q63638) Striated muscle-specific serine/threonine prot... 28 8.9
31YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3 28 8.9
32PKH3_YEAST (Q03306) Serine/threonine-protein kinase PKH3 (EC 2.7... 28 8.9
33NBEA_MOUSE (Q9EPN1) Protein neurobeachin (Lysosomal trafficking ... 28 8.9

>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
 Frame = +1

Query: 58  KDKDAPRSPTPSAP-GSQGQGA-ATRDKGNKKSKVVSLATTIPVAIXXXXXXXXXXXXXF 231
           KDK +  SP  S+P G  G G    +D+   KS    +   +   +             F
Sbjct: 445 KDKSSLSSPGSSSPSGGSGSGINGDKDRRGMKSSTF-IGIIVGSVLGGLLSIFLIGLLVF 503

Query: 232 C---KKNGSSVQPQATSSVVVHPRNSPDPENMVKVVMT-SNDSFGATSS-----GTSSRD 384
           C   K+       +++++VVVHPR+S      VK+ +  S+ S G  S      GTS   
Sbjct: 504 CWYKKRQKRFSGSESSNAVVVHPRHSGSDNESVKITVAGSSVSVGGISDTYTLPGTSEVG 563

Query: 385 SDIHMTEARSFMVSLQVLRCATKNFAQD 468
            +I M EA + ++S+QVLR  T NF+ D
Sbjct: 564 DNIQMVEAGNMLISIQVLRSVTNNFSSD 591



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>VTS1_SCHPO (Q9P6R7) Protein vts1|
          Length = 713

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 18/152 (11%)
 Frame = +1

Query: 25  NMQSSPGGSTPK-DKDAPRSPTPS---------APGSQGQGAATRDKGNKKSKVVSLATT 174
           ++ SSP G +P      P   T S          P S  QG A   K +  S  +S A+ 
Sbjct: 162 SLPSSPKGDSPSLSSSLPSLTTKSNLSGNLNMVTPAST-QGPAFSSK-HGFSNALSTASP 219

Query: 175 IPVAIXXXXXXXXXXXXXFCKKNG-------SSVQPQATSSVVVHPRNSPDPENM-VKVV 330
           IPV                  KN        SS++P A SS    PRN+P P N    + 
Sbjct: 220 IPVRTSSVSSTYLTQDREASSKNCLSKALAFSSIEPPA-SSASTSPRNTPTPSNNGTSIN 278

Query: 331 MTSNDSFGATSSGTSSRDSDIHMTEARSFMVS 426
                S  + S+G +S+ +D+ +  ++  + S
Sbjct: 279 ANVTSSLTSNSTGKTSKTTDLLIAASKKSLPS 310



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>ZN395_HUMAN (Q9H8N7) Zinc finger protein 395 (Papillomavirus-binding factor)|
           (Papillomavirus regulatory factor 1) (PRF-1) (Huntington
           disease gene regulatory region-binding protein 2)
           (HDBP-2) (HD gene regulatory region-binding protein 2)
           (HD-regulating
          Length = 513

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
 Frame = +2

Query: 11  AIPTSTCSRRPVVLLPRTRT-PLGHRRQARPAHKAKGL----PLATKGTRRAR----LCR 163
           A P++ CS  PV    R+R+      +Q  PA K+  +    P A  G R+AR     CR
Sbjct: 432 AAPSAACSLSPV----RSRSLSFSEPQQPAPAMKSHLIVTSPPRAQSGARKARGEAKKCR 487

Query: 164 WLPQFRLRSGWCHCCHWVLWC 226
            +     R  WC  C W   C
Sbjct: 488 KVYGIEHRDQWCTACRWKKAC 508



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>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 35/131 (26%), Positives = 46/131 (35%)
 Frame = +1

Query: 10  GNPNFNMQSSPGGSTPKDKDAPRSPTPSAPGSQGQGAATRDKGNKKSKVVSLATTIPVAI 189
           G+      + PGG+      +P SPT S PGS            K S  VS AT+ P   
Sbjct: 146 GSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGSTTPPGGAHSP--KSSSAVSPATSPP--- 200

Query: 190 XXXXXXXXXXXXXFCKKNGSSVQPQATSSVVVHPRNSPDPENMVKVVMTSNDSFGATSSG 369
                           K+GS V P  +      P  S  P +     MTS  +  A  S 
Sbjct: 201 -----------GSMAPKSGSPVSPTTSPPA---PPKSTSPVSPSSAPMTSPPAPMAPKSS 246

Query: 370 TSSRDSDIHMT 402
           ++   S   MT
Sbjct: 247 STIPPSSAPMT 257



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>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = +1

Query: 34   SSPGGSTPKDKDAPRSPTPSAPGSQGQGAATR------DKGN-KKSKVVSLATT 174
            +SPGGS        RS +PS PG       T+      DKGN KK KV  L T+
Sbjct: 3510 TSPGGSPSSPSSGQRSASPSVPGPTKPKPKTKRFQLPLDKGNGKKHKVSHLRTS 3563



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>VIF_BIV27 (P19563) Virion infectivity factor (Q protein)|
          Length = 198

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = -3

Query: 238 SCRRAPQHPVTAMTPPRSQPELW*PATQPCSSCSLCREWQPLGLVS 101
           SCRRA Q  V   TP  S   L   A Q C++  LC  W PLG ++
Sbjct: 133 SCRRALQASVLTSTPRHSLQRL--AALQLCTNACLC--WYPLGRIN 174



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>VIF_BIV06 (P19562) Virion infectivity factor (Q protein)|
          Length = 198

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = -3

Query: 238 SCRRAPQHPVTAMTPPRSQPELW*PATQPCSSCSLCREWQPLGLVS 101
           SCRRA Q  V   TP  S   L   A Q C++  LC  W PLG ++
Sbjct: 133 SCRRALQASVLTSTPRHSLQRL--AALQLCTNACLC--WYPLGRIN 174



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>NFI_STRCO (Q9X7N2) Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)|
           (Deoxyribonuclease V) (DNase V)
          Length = 233

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 1   ILTGNPNFNMQSSPGGSTPKDKDAPR-SPTPSAPGSQGQGAATRDKGNKKSKVVSL 165
           +LTG P   +  +P   T  D D PR S +P   G++  G A R +   K   VS+
Sbjct: 134 VLTGLPTIGVAKNPFTFTHDDPDTPRGSTSPLLAGAEEVGRAVRTRDGVKPVFVSV 189



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>GAG_SFV3L (P27400) Gag polyprotein (Core polyprotein)|
          Length = 643

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
 Frame = +1

Query: 31  QSSPGGSTPKDKDAPRSPTPSAPGSQ----GQGAATRDKGNKKSKVVSLATTIPVAIXXX 198
           Q+ PG S+ + +   + P P A G Q    G G   + +GN+              +   
Sbjct: 553 QAQPGRSSDQPRSQSQQPQPEARGDQSRTSGAGRGQQGRGNQNRNQRRADANNTRNVDTV 612

Query: 199 XXXXXXXXXXFCKKNGSSVQPQATSS 276
                        +NGSS  P A+ S
Sbjct: 613 TATTTSSSTASSGQNGSSTTPPASGS 638



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>RGNEF_MOUSE (P97433) Rho-guanine nucleotide exchange factor (Rho-interacting|
            protein 2) (RhoGEF) (RIP2)
          Length = 1693

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +1

Query: 10   GNPNFNMQSSPGGS----TPKDKDAPRSPTPS--APGSQGQGAATRDKG 138
            G+ + + + SPGG+    TP  +D P SPT S    G++G+G    D G
Sbjct: 1291 GDVSQSSEESPGGTVLMDTPSTQDVPASPTASLVTEGTEGRGCWDVDPG 1339



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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 4   LTGNPNFNMQSSPGGSTPKDKDAPRSPTPSAPGSQGQGA 120
           L  +P+ ++ S    S+P D+    +P+PS+ GS+G GA
Sbjct: 213 LAPSPSDSVASLAPSSSPSDESPSPAPSPSSSGSKGGGA 251



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>TTHY_RANCA (P31779) Transthyretin precursor (Prealbumin) (Tadpole T3-binding|
           protein) (T-T3BP) (THBP)
          Length = 153

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 292 RNSPDPENMVKVVMTSND-SFGATSSGTSSRDSDIH-MTEARSFMVSLQVLRCATKNF 459
           R  P  +  VKV   + D S+   SSGT+S D +IH +     F+  +  L  ATK F
Sbjct: 44  RGIPAAKLPVKVFKQNEDKSWDLISSGTTSSDGEIHNLATEEQFVEGIYKLEFATKRF 101



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>TRME_PSESM (Q87TS2) tRNA modification GTPase trmE|
          Length = 456

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 465 LSKVLGGTTKNLQGDHKTACLGHVNVTVPAAGSARRSAEAVIARHDNLDH 316
           LS   GG    L  +H  AC+G+   +  +  + RR  EA+    D+L+H
Sbjct: 358 LSARSGGEGLELLREHLKACMGYEQTSESSFSARRRHLEALRHASDSLEH 407



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>SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2 (SREBP-2)|
           (Sterol regulatory element-binding transcription factor
           2)
          Length = 1139

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
 Frame = +1

Query: 34  SSPGGSTPKDKDAPRSPTPSAPGSQGQGAATRDKGNKKS-KVVSLATTIPVAIXXXXXXX 210
           S PGG +     +  S + S   S+G G A  D G ++S   V L T  P          
Sbjct: 53  SFPGGGSSGSSSSSNSSSSSGSNSRGNGGAATDPGVQRSFSQVPLPTFSP--------ST 104

Query: 211 XXXXXXFCKKNGSSVQPQATSSVVVHPRNSPDPE 312
                   +   S   P+AT   V+ PR  P P+
Sbjct: 105 ASPQALALQVKVSPTPPRATP--VLQPRPQPQPQ 136



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>NU2M_MAMPR (Q38PS1) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 347

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -2

Query: 407 ASVM*MSLSRLLVPLDVAPKLSLLVMTTLTMFSGSGLLRGWT 282
           A+ +  S+S L++  +  P +++++MTTL    G  LL G+T
Sbjct: 220 ANTLTTSMSSLILMWNKTPAMTIMLMTTLLSLGGLPLLSGFT 261



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>SMAD1_MOUSE (P70340) Mothers against decapentaplegic homolog 1 (SMAD 1)|
           (Mothers against DPP homolog 1) (Mad-related protein 1)
           (Mothers-against-DPP-related-1) (mMad1) (Dwarfin-A)
           (Dwf-A)
          Length = 465

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 13  NPNFNMQSSPGGSTPKDKDAPRSPTPSAPGSQGQ 114
           +PN +  +SPGGS+      P SPT S PGS  Q
Sbjct: 187 SPNSSYPNSPGGSS---STYPHSPTSSDPGSPFQ 217



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>Y959_METJA (Q58369) Putative aminotransferase MJ0959 (EC 2.6.1.-)|
          Length = 385

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +1

Query: 310 ENMVKVVMTSNDSFGATSSGTSSRDSDIHMTEARSFMVSLQVLRCATKNFAQ 465
           E + KV +T ND+F  T SGT++ D  I     R      +VL   T NF +
Sbjct: 47  EKLKKVFITENDTFLITGSGTAAMDMAISNIIKRGD----KVLNIVTGNFGE 94



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>RLA0_PYRHO (O74109) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 342

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 34  SSPGGSTPKDKDAPRSPTPSAPG 102
           + PG   PKD   P  PTP APG
Sbjct: 112 AKPGAVVPKDVVVPAGPTPLAPG 134



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>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
           (Proline-rich synapse associated protein 2) (ProSAP2)
           (SPANK-2)
          Length = 1815

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 34  SSPGGSTPKDKDAPRSPTPSAPGSQG 111
           S PGGS P     P SP P AP  +G
Sbjct: 511 SGPGGSGPAPGPGPASPAPPAPPPRG 536



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>RLA0_PYRAB (Q9UXS5) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 341

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 34  SSPGGSTPKDKDAPRSPTPSAPG 102
           + PG   PKD   P  PTP APG
Sbjct: 112 AKPGAVVPKDVVIPAGPTPLAPG 134



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>RL2_MYCGA (O52335) 50S ribosomal protein L2|
          Length = 283

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +1

Query: 13  NPNFNMQSSPGGSTPKDKDAPRSPTPSAPGSQGQGAATRDKGNKKS 150
           NPN +      G +P  +DAPR+P     G +  G  TR+  NKKS
Sbjct: 232 NPNDHPHGGGEGRSPVGRDAPRTPW----GKRHMGVKTRN--NKKS 271



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>ALEU_HORVU (P05167) Thiol protease aleurain precursor (EC 3.4.22.16)|
          Length = 362

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 75  SVTDAKRARLTRPRGCHSRQREQEEQGCVAGYHNSGCDRG 194
           S T A  A  T+  G +    EQ+   C  G++N GC+ G
Sbjct: 172 STTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGG 211



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>NBEA_HUMAN (Q8NFP9) Protein neurobeachin (Lysosomal trafficking regulator 2)|
            (Protein BCL8B)
          Length = 2946

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 26/90 (28%), Positives = 38/90 (42%)
 Frame = -2

Query: 377  LLVPLDVAPKLSLLVMTTLTMFSGSGLLRGWTTTEEVACGCTDDPFFLQKSTTAPSDSND 198
            ++VP+   P  SL V T     +GSGL  G T+    A G T        +TT   DS  
Sbjct: 1791 VVVPVKKPPPGSLAVTTVGATTAGSGLPTGSTSNIFAATGATPKSMI---NTTGAVDSGS 1847

Query: 197  TTPIATGIVVASDTTLLFLFPLSRVAAPWP 108
            ++  ++   V   T+     P  +  AP P
Sbjct: 1848 SSSSSSSSFVNGATSK--NLPAVQTVAPMP 1875



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>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +1

Query: 40  PGGSTPKDKDAPRSPTPSAPGSQGQGAA 123
           PG S P     P  P PS PG  G G A
Sbjct: 202 PGKSQPVSGPGPGGPGPSGPGGPGPGPA 229



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>PALM_HUMAN (O75781) Paralemmin|
          Length = 387

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
 Frame = +1

Query: 25  NMQSSPGGSTPKDKDAPRSPTPSAPGSQGQGAA--------TRDKGNKKSKVVSLATTIP 180
           N Q +P G TPKDK    +P  +  GS    AA         +DK   +++V+S  T +P
Sbjct: 137 NSQQTPVG-TPKDKRVSNTPLRTVDGSPMMKAAMYSVEITVEKDKVTGETRVLSSTTLLP 195



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>PHP_DROME (P39769) Polyhomeotic-proximal chromatin protein|
          Length = 1589

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 10  GNPNFNMQSSPGGSTPKDKDAPRSPTPSAPGSQGQGAATRDKGNKKSKVVSLATTIPVAI 189
           G P    + +   STP    AP +P  +        + T +K     + V+  TT+P+ I
Sbjct: 144 GTPPTGRRQTHTPSTPNRPSAPSTPNTNCNSIARHTSLTLEKAQNPGQQVAATTTVPLQI 203



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>RL2_MYCPE (Q8EUB6) 50S ribosomal protein L2|
          Length = 279

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 13  NPNFNMQSSPGGSTPKDKDAPRSPTPSAPGSQGQGAATRDKGNKKSKVV 159
           NPN +      G +P   DAPR+P     G +  G  TR+K  + + ++
Sbjct: 230 NPNDHPHGGGEGRSPVGHDAPRTPW----GKRHMGVKTRNKKKQSNALI 274



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>CHDM_DROME (O97159) Chromodomain helicase-DNA-binding protein Mi-2 homolog (EC|
            3.6.1.-) (ATP-dependent helicase Mi-2) (dMi-2)
          Length = 1982

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 40   PGGSTPKDKDAPRSPTPSAPGSQGQGA 120
            P  S+PKD+ A  + T +A G+ G+GA
Sbjct: 1690 PSASSPKDQKAVAAATSAATGATGKGA 1716



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>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)|
          Length = 1426

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 31  QSSPGGSTPKDKDAPRSPTPSAPGSQGQGAATRDKGNKK--SKVVSLATT 174
           Q +P   TP +  APRS TP    S GQ  AT     +K  +KVV + +T
Sbjct: 137 QHTPHSMTPSNATAPRSSTP----SHGQTTATEPTPAQKTPAKVVYVFST 182



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>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3259

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 368  EPAAGTVTFT*PRHAVLWSPCRFFVVPPRT 457
            +PA  TVTF      V+W  CR  ++ PRT
Sbjct: 1410 QPACVTVTFNHVEAQVVWRSCRGALLEPRT 1439



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>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3|
          Length = 266

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 16  PNFNMQSSPGGSTPKDKDAPRSP-TPSAPGSQG 111
           PN N   +PG      +DAP  P TP APG QG
Sbjct: 158 PNGN-PGAPGAPGQPGQDAPSEPITPGAPGPQG 189



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>PKH3_YEAST (Q03306) Serine/threonine-protein kinase PKH3 (EC 2.7.11.1)|
           (Pkb-activating kinase homolog 3)
          Length = 898

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +1

Query: 1   ILTGNPNFNMQSSPGGSTPKDK---DAPRSPTPSAPGSQGQGAATRDKGNKKSKVV 159
           ILT     +   SP  ST K +      R PTPS P  Q +   TR+K +  S +V
Sbjct: 801 ILTSKKQGSSVFSPSSSTTKPQIKTTGYRQPTPSPPLPQMEFPTTREKYSAPSNMV 856



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>NBEA_MOUSE (Q9EPN1) Protein neurobeachin (Lysosomal trafficking regulator 2)|
          Length = 2936

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 26/90 (28%), Positives = 39/90 (43%)
 Frame = -2

Query: 377  LLVPLDVAPKLSLLVMTTLTMFSGSGLLRGWTTTEEVACGCTDDPFFLQKSTTAPSDSND 198
            ++VP+   P  SL V T     +GSGL  G T++   A G T        +TT   DS  
Sbjct: 1781 VVVPVKKPPPGSLAVTTVGATAAGSGLPTGSTSSIFAAPGATPKSMI---NTTGAVDSGS 1837

Query: 197  TTPIATGIVVASDTTLLFLFPLSRVAAPWP 108
            ++  ++   V   T+     P  +  AP P
Sbjct: 1838 SSSSSSSSFVNGATSK--NLPAVQTVAPMP 1865


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.308    0.122    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,689,804
Number of Sequences: 219361
Number of extensions: 1351039
Number of successful extensions: 5236
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5217
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
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