ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet31a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476301.2| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
2gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 208 1e-50
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
4dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
5dbj|AK105690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
6dbj|AK068474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
7gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence 145 1e-31
8ref|NM_124534.2| Arabidopsis thaliana unknown protein AT5G51550 ... 42 1.5
9emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.5
10emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 42 1.5
11gb|AY103306.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, co... 42 1.5
12gb|AE011873.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.5
13gb|AY058883.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, co... 42 1.5
14gb|AF428325.1|AF428325 Arabidopsis thaliana AT5g51550/K17N15_10 ... 42 1.5
15emb|BX821853.1|CNS0A8AB Arabidopsis thaliana Full-length cDNA Co... 42 1.5
16emb|BX832775.1|CNS0A0KF Arabidopsis thaliana Full-length cDNA Co... 42 1.5
17emb|BX831378.1|CNS0A0O9 Arabidopsis thaliana Full-length cDNA Co... 42 1.5
18gb|AY087269.1| Arabidopsis thaliana clone 33455 mRNA, complete s... 42 1.5
19dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.5
20gb|AY666490.1| Anas platyrhynchos voucher 1B-3367 cytochrome oxi... 40 5.8
21gb|AY666496.1| Anas platyrhynchos voucher 1B-3638 cytochrome oxi... 40 5.8
22gb|AY666221.1| Anas rubripes voucher 1B-726 cytochrome oxidase s... 40 5.8
23gb|AY666211.1| Anas rubripes voucher 1B-711 cytochrome oxidase s... 40 5.8
24gb|AY666405.1| Anas crecca voucher 1B-2590 cytochrome oxidase su... 40 5.8
25ref|XM_466501.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
26ref|NM_190003.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
27ref|XM_478424.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
28ref|XM_478215.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
29ref|XM_883530.1| Leishmania major strain Friedlin hypothetical p... 40 5.8
30emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4,... 40 5.8
31ref|XM_741765.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.8
32gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 5.8
33gb|AC091150.15| Homo sapiens chromosome 18, clone RP11-735D6, co... 40 5.8
34gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, com... 40 5.8
35gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence 40 5.8
36gb|AC012568.7| Homo sapiens chromosome 15, clone RP11-342M21, co... 40 5.8
37gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.8
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
41gb|AC010907.10| Homo sapiens BAC clone RP11-568H24 from 2, compl... 40 5.8
42gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, comp... 40 5.8
43dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
44dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
45dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
46dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
47dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
48dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
50dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
51dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
52dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
53dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
54dbj|AK069976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
55dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
56dbj|AK060799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
57gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, com... 40 5.8
58gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.8
59gb|AY662783.1| Pterophyllum scalare cytochrome oxidase subunit I... 40 5.8
60gb|AC120789.12| Mus musculus chromosome 8, clone RP23-441F24, co... 40 5.8 
>ref|XM_476301.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1348

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                       
Query: 229 tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 288
           |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 217 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 276

                                                                       
Query: 289 gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 348
           ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 277 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 336

                                                        
Query: 349 accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 393
           | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 337 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 381
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                          
Query: 229    tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 288
              |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 109368 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 109427

                                                                          
Query: 289    gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 348
              ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 109428 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 109487

                                                           
Query: 349    accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 393
              | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 109488 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 109532
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                           
Query: 229     tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 288
               |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 1789152 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 1789211

                                                                           
Query: 289     gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 348
               ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 1789212 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 1789271

                                                            
Query: 349     accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 393
               | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 1789272 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 1789316
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0679C08
          Length = 156266

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                          
Query: 229    tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 288
              |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 114301 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 114360

                                                                          
Query: 289    gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 348
              ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 114361 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 114420

                                                           
Query: 349    accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 393
              | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 114421 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 114465
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>dbj|AK105690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C03, full
           insert sequence
          Length = 1482

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                       
Query: 229 tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 288
           |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 245 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 304

                                                                       
Query: 289 gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 348
           ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 305 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 364

                                                        
Query: 349 accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 393
           | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 365 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 409
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>dbj|AK068474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H19, full
           insert sequence
          Length = 1351

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                       
Query: 229 tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 288
           |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 219 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 278

                                                                       
Query: 289 gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 348
           ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 279 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggccagccg 338

                                                        
Query: 349 accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 393
           | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 339 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 383
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>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence
          Length = 130987

 Score =  145 bits (73), Expect = 1e-31
 Identities = 139/161 (86%)
 Strand = Plus / Plus

                                                                          
Query: 231    ggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgggc 290
              ||||| || |||||||||||||| ||||| ||  |||| ||||| |||||||||||||| 
Sbjct: 101784 ggcgcttcaaagaagttcgagggctcgtcggagttcgtgaagctagagtaccacatgggt 101843

                                                                          
Query: 291    cccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccgac 350
              |||||||| ||  ||| |||||| || |||||||||||||| ||||||||||| ||||  
Sbjct: 101844 cccgtcctggcgtccgccatcacggtgcacccgatctggtatggcgcctggcccgccgcg 101903

                                                       
Query: 351    cagaagcgcaccatccgcgccttcctccgctccctctcgcc 391
              ||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 101904 cagaagcgcacgatccgcgcgttcctccgctccctcgcgcc 101944
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>ref|NM_124534.2| Arabidopsis thaliana unknown protein AT5G51550 mRNA, complete cds
          Length = 1402

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 286 acatcaccgttcacccaatctggtacggc 314
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 320     cccgatctggtacggcgcctggccg 344
               |||||||||| ||||||||||||||
Sbjct: 2892204 cccgatctgggacggcgcctggccg 2892228
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     cggtaaaccgcgcgtcattcc 106
              |||||||||||||||||||||
Sbjct: 772616 cggtaaaccgcgcgtcattcc 772596
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>gb|AY103306.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, complete cds
          Length = 1014

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 197 acatcaccgttcacccaatctggtacggc 225
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>gb|AE011873.1| Xanthomonas axonopodis pv. citri str. 306,  section 251 of 469 of the
            complete genome
          Length = 10565

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 320  cccgatctggtacggcgcctggccg 344
            |||||||||| ||||||||||||||
Sbjct: 7807 cccgatctgggacggcgcctggccg 7831
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>gb|AY058883.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, complete cds
          Length = 1221

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 285 acatcaccgttcacccaatctggtacggc 313
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>gb|AF428325.1|AF428325 Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, complete cds
          Length = 1211

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 282 acatcaccgttcacccaatctggtacggc 310
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>emb|BX821853.1|CNS0A8AB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL7ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 978

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 554 acatcaccgttcacccaatctggtacggc 526
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>emb|BX832775.1|CNS0A0KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL10ZD05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1193

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 264 acatcaccgttcacccaatctggtacggc 292
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>emb|BX831378.1|CNS0A0O9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS84ZD11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1234

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 268 acatcaccgttcacccaatctggtacggc 296
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>gb|AY087269.1| Arabidopsis thaliana clone 33455 mRNA, complete sequence
          Length = 1272

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 307 acatcaccgtccacccgatctggtacggc 335
           |||||||||| ||||| ||||||||||||
Sbjct: 286 acatcaccgttcacccaatctggtacggc 314
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>dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K17N15
          Length = 81293

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 307   acatcaccgtccacccgatctggtacggc 335
             |||||||||| ||||| ||||||||||||
Sbjct: 39185 acatcaccgttcacccaatctggtacggc 39157
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>gb|AY666490.1| Anas platyrhynchos voucher 1B-3367 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 ccccgtcctcgccgccgacatcac 313
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AY666496.1| Anas platyrhynchos voucher 1B-3638 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 ccccgtcctcgccgccgacatcac 313
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AY666221.1| Anas rubripes voucher 1B-726 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 692

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 ccccgtcctcgccgccgacatcac 313
           ||||||||||||||||| ||||||
Sbjct: 545 ccccgtcctcgccgccggcatcac 568
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>gb|AY666211.1| Anas rubripes voucher 1B-711 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 ccccgtcctcgccgccgacatcac 313
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AY666405.1| Anas crecca voucher 1B-2590 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 649

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 ccccgtcctcgccgccgacatcac 313
           ||||||||||||||||| ||||||
Sbjct: 502 ccccgtcctcgccgccggcatcac 525
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>ref|XM_466501.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1861

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 365 ccgcgccttcctccgctccc 384
           ||||||||||||||||||||
Sbjct: 421 ccgcgccttcctccgctccc 440
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>ref|NM_190003.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1494

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 364 tccgcgccttcctccgctccctct 387
           |||||||| |||||||||||||||
Sbjct: 86  tccgcgccctcctccgctccctct 109
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>ref|XM_478424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2115

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atgggccccgtcctcgccgc 304
           ||||||||||||||||||||
Sbjct: 186 atgggccccgtcctcgccgc 167
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>ref|XM_478215.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 agtaccacatgggccccgtc 296
           ||||||||||||||||||||
Sbjct: 137 agtaccacatgggccccgtc 156
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>ref|XM_883530.1| Leishmania major strain Friedlin hypothetical protein (L2385.05)
            partial mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  ctcgccgccgacatcaccgt 316
            ||||||||||||||||||||
Sbjct: 1776 ctcgccgccgacatcaccgt 1795
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>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ctcgccgccgacatcaccgt 316
              ||||||||||||||||||||
Sbjct: 194124 ctcgccgccgacatcaccgt 194105
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>ref|XM_741765.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g00720)
           partial mRNA
          Length = 1143

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 393 cagtcccccgtcccgtccccgtcc 416
           |||||||| |||||||||||||||
Sbjct: 958 cagtccccagtcccgtccccgtcc 935
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    cctcgccgccgacatcaccg 315
              ||||||||||||||||||||
Sbjct: 118192 cctcgccgccgacatcaccg 118211
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>gb|AC091150.15| Homo sapiens chromosome 18, clone RP11-735D6, complete sequence
          Length = 186874

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      cccactctccctccatggat 25
              ||||||||||||||||||||
Sbjct: 185448 cccactctccctccatggat 185429
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>gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, complete sequence
          Length = 188519

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ctctccctccatggatttta 29
             ||||||||||||||||||||
Sbjct: 97435 ctctccctccatggatttta 97454
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>gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence
          Length = 169540

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      cccactctccctccatggat 25
              ||||||||||||||||||||
Sbjct: 147078 cccactctccctccatggat 147097
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>gb|AC012568.7| Homo sapiens chromosome 15, clone RP11-342M21, complete sequence
          Length = 166785

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    attttacagtctcaccacca 43
             ||||||||||||||||||||
Sbjct: 26854 attttacagtctcaccacca 26873
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    cctcgccgccgacatcaccg 315
              ||||||||||||||||||||
Sbjct: 771925 cctcgccgccgacatcaccg 771906
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      atgggccccgtcctcgccgc 304
                ||||||||||||||||||||
Sbjct: 19885225 atgggccccgtcctcgccgc 19885206



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 277      agtaccacatgggccccgtc 296
                ||||||||||||||||||||
Sbjct: 18564848 agtaccacatgggccccgtc 18564867
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 365      ccgcgccttcctccgctccc 384
                ||||||||||||||||||||
Sbjct: 22998643 ccgcgccttcctccgctccc 22998662



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 19      catggattttacagtctcaccacc 42
               ||||||||||| ||||||||||||
Sbjct: 6980537 catggattttatagtctcaccacc 6980514
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 364      tccgcgccttcctccgctccctct 387
                |||||||| |||||||||||||||
Sbjct: 40763888 tccgcgccctcctccgctccctct 40763865



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 292      ccgtcctcgccgccgacatc 311
                ||||||||||||||||||||
Sbjct: 25998071 ccgtcctcgccgccgacatc 25998052
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>gb|AC010907.10| Homo sapiens BAC clone RP11-568H24 from 2, complete sequence
          Length = 139357

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    cccccgtcccgtccccgtcc 416
              ||||||||||||||||||||
Sbjct: 117790 cccccgtcccgtccccgtcc 117809
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>gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, complete sequence
          Length = 187191

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     caccaccaccgtcccccacc 55
              ||||||||||||||||||||
Sbjct: 173972 caccaccaccgtcccccacc 173991
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>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0052O12
          Length = 167881

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 364   tccgcgccttcctccgctccctct 387
             |||||||| |||||||||||||||
Sbjct: 66534 tccgcgccctcctccgctccctct 66511
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>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0707D10
          Length = 172003

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   ccgtcctcgccgccgacatc 311
             ||||||||||||||||||||
Sbjct: 94138 ccgtcctcgccgccgacatc 94119
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>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0038D11
          Length = 156465

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  ccgtcctcgccgccgacatc 311
            ||||||||||||||||||||
Sbjct: 1646 ccgtcctcgccgccgacatc 1627
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   agtaccacatgggccccgtc 296
             ||||||||||||||||||||
Sbjct: 17390 agtaccacatgggccccgtc 17409
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>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1067_B01
          Length = 100525

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   ccgcgccttcctccgctccc 384
             ||||||||||||||||||||
Sbjct: 23040 ccgcgccttcctccgctccc 23059
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>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470A03
          Length = 133167

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 19    catggattttacagtctcaccacc 42
             ||||||||||| ||||||||||||
Sbjct: 74159 catggattttatagtctcaccacc 74136
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0016G10
          Length = 143211

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    ccgcgccttcctccgctccc 384
              ||||||||||||||||||||
Sbjct: 118445 ccgcgccttcctccgctccc 118464
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   atgggccccgtcctcgccgc 304
             ||||||||||||||||||||
Sbjct: 49875 atgggccccgtcctcgccgc 49856
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   agtaccacatgggccccgtc 296
             ||||||||||||||||||||
Sbjct: 93604 agtaccacatgggccccgtc 93623
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    atgggccccgtcctcgccgc 304
              ||||||||||||||||||||
Sbjct: 125384 atgggccccgtcctcgccgc 125365
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>dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098C24, full
           insert sequence
          Length = 2185

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 atgggccccgtcctcgccgc 304
           ||||||||||||||||||||
Sbjct: 54  atgggccccgtcctcgccgc 35
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>dbj|AK069976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035N02, full
           insert sequence
          Length = 1861

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 365 ccgcgccttcctccgctccc 384
           ||||||||||||||||||||
Sbjct: 421 ccgcgccttcctccgctccc 440
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>dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H11, full
           insert sequence
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 agtaccacatgggccccgtc 296
           ||||||||||||||||||||
Sbjct: 137 agtaccacatgggccccgtc 156
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>dbj|AK060799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F03, full
           insert sequence
          Length = 1769

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 19  catggattttacagtctcaccacc 42
           ||||||||||| ||||||||||||
Sbjct: 304 catggattttatagtctcaccacc 281
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>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence
          Length = 174120

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    cccccgtcccgtccccgtcc 416
              ||||||||||||||||||||
Sbjct: 125849 cccccgtcccgtccccgtcc 125830
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     cggcgcctggccggccgacc 351
               ||||||||||||||||||||
Sbjct: 3408867 cggcgcctggccggccgacc 3408848
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>gb|AY662783.1| Pterophyllum scalare cytochrome oxidase subunit I gene, partial
           cds; mitochondrial
          Length = 649

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 ccccgtcctcgccgccgacatcac 313
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AC120789.12| Mus musculus chromosome 8, clone RP23-441F24, complete sequence
          Length = 204013

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   cccccgtcccgtccccgtcc 416
             ||||||||||||||||||||
Sbjct: 32397 cccccgtcccgtccccgtcc 32378


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,937,631
Number of Sequences: 3902068
Number of extensions: 1937631
Number of successful extensions: 48645
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48050
Number of HSP's gapped (non-prelim): 595
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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