ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet30h01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105008.1| Zea mays PCO123247 mRNA sequence Length = 1195 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 263 tggtcgccgccgccgggcctgccgccgcggcgcctgtggccgacc 307 ||||||||||||| ||||| ||||| ||||| || |||||||||| Sbjct: 163 tggtcgccgccgcggggccggccgcggcggcaccggtggccgacc 207
>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence Length = 168753 Score = 46.1 bits (23), Expect = 0.074 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cgccggtggtcgccgccgccggg 279 ||||||||||||||||||||||| Sbjct: 83449 cgccggtggtcgccgccgccggg 83471
>dbj|AB232384.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 gene for plastid omega-3 fatty acid desaturase, complete cds Length = 5636 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 acctcccccgccgccggcttcg 190 |||||||||||||||||||||| Sbjct: 2280 acctcccccgccgccggcttcg 2259
>dbj|AB232382.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 mRNA for plastid omega-3 fatty acid desaturase, complete cds Length = 1755 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 acctcccccgccgccggcttcg 190 |||||||||||||||||||||| Sbjct: 400 acctcccccgccgccggcttcg 379
>gb|DQ215653.1| Taeniopygia guttata clone 0058P0003H10 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 788 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 53 gccgccgccgggcccgccgccgccgcgcc 81
>gb|DQ215652.1| Taeniopygia guttata clone 0061P0021C07 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 804 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215651.1| Taeniopygia guttata clone 0058P0044C08 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 790 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215650.1| Taeniopygia guttata clone 0058P0010E07 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 790 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215648.1| Taeniopygia guttata clone 0058P0046C10 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 759 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 43 gccgccgccgggcccgccgccgccgcgcc 71
>gb|DQ215647.1| Taeniopygia guttata clone 0058P0045E02 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 740 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 16 gccgccgccgggcccgccgccgccgcgcc 44
>gb|DQ215645.1| Taeniopygia guttata clone 0058P0037H06 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 790 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215643.1| Taeniopygia guttata clone 0058P0017F08 calmodulin 1 internal priming 2-like mRNA, complete sequence Length = 809 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215642.1| Taeniopygia guttata clone 0058P0032G08 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 625 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 66 gccgccgccgggcccgccgccgccgcgcc 94
>gb|DQ215640.1| Taeniopygia guttata clone 0058P0059D06 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 627 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215639.1| Taeniopygia guttata clone 0058P0055B03 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 629 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 70 gccgccgccgggcccgccgccgccgcgcc 98
>gb|DQ215638.1| Taeniopygia guttata clone 0058P0025F03 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 628 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215637.1| Taeniopygia guttata clone 0058P0061G04 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 608 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 49 gccgccgccgggcccgccgccgccgcgcc 77
>gb|DQ215636.1| Taeniopygia guttata clone 0058P0058B07 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 629 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 70 gccgccgccgggcccgccgccgccgcgcc 98
>gb|DQ215635.1| Taeniopygia guttata clone 0058P0019F05 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 624 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 66 gccgccgccgggcccgccgccgccgcgcc 94
>gb|DQ215634.1| Taeniopygia guttata clone 0058P0045F10 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 628 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215633.1| Taeniopygia guttata clone 0058P0018B06 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 628 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215632.1| Taeniopygia guttata clone 0061P0010C12 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 628 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215631.1| Taeniopygia guttata clone 0058P0012G09 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 625 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 66 gccgccgccgggcccgccgccgccgcgcc 94
>gb|DQ215630.1| Taeniopygia guttata clone 0058P0039H10 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 628 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215629.1| Taeniopygia guttata clone 0058P0010B05 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 628 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215628.1| Taeniopygia guttata clone 0058P0031C04 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 625 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 66 gccgccgccgggcccgccgccgccgcgcc 94
>gb|DQ215627.1| Taeniopygia guttata clone 0058P0022B07 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 627 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215625.1| Taeniopygia guttata clone 0058P0059C02 calmodulin 1 internal priming 3-like mRNA, complete sequence Length = 1430 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215624.1| Taeniopygia guttata clone 0063P0016C08 calmodulin 1 internal priming 3-like mRNA, complete sequence Length = 1452 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215623.1| Taeniopygia guttata clone 0058P0006D07 calmodulin 1 internal priming 3-like mRNA, complete sequence Length = 1431 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>gb|DQ215622.1| Taeniopygia guttata clone 0058P0007C01 calmodulin 1 internal priming 3-like mRNA, complete sequence Length = 1450 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgcc 296 |||||||||||||| |||||||| ||||| Sbjct: 69 gccgccgccgggcccgccgccgccgcgcc 97
>ref|XM_363786.1| Magnaporthe grisea 70-15 hypothetical protein (MG01712.4) partial mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gccgccgcggcgcctgtggcc 303 ||||||||||||||||||||| Sbjct: 22 gccgccgcggcgcctgtggcc 42
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggccgcggtggagcagcctat 341 ||||||||||||||||||||| Sbjct: 28741 ggccgcggtggagcagcctat 28721
>gb|AC100803.11| Homo sapiens chromosome 8, clone CTD-3064M3, complete sequence Length = 152418 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ttcccggccccttccccgcca 47 ||||||||||||||||||||| Sbjct: 45665 ttcccggccccttccccgcca 45645
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 269 ccgccgccgggcct-gccgccgcggcgcc 296 |||||||||||||| |||||||||||||| Sbjct: 23156066 ccgccgccgggcctcgccgccgcggcgcc 23156094 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgacctcccccgccgccggc 186 |||||||||||||||||||| Sbjct: 26826828 cgacctcccccgccgccggc 26826847
>dbj|AK099256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F17, full insert sequence Length = 1660 Score = 42.1 bits (21), Expect = 1.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 269 ccgccgccgggcct-gccgccgcggcgcc 296 |||||||||||||| |||||||||||||| Sbjct: 277 ccgccgccgggcctcgccgccgcggcgcc 249
>dbj|AK069927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035H23, full insert sequence Length = 1663 Score = 42.1 bits (21), Expect = 1.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 269 ccgccgccgggcct-gccgccgcggcgcc 296 |||||||||||||| |||||||||||||| Sbjct: 280 ccgccgccgggcctcgccgccgcggcgcc 252
>dbj|AP005792.5| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1533H12, complete sequence Length = 141371 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ttcccggccccttccccgcca 47 ||||||||||||||||||||| Sbjct: 46387 ttcccggccccttccccgcca 46367
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 gacggaaccccggccgcggtg 330 ||||||||||||||||||||| Sbjct: 1185483 gacggaaccccggccgcggtg 1185503
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 269 ccgccgccgggcct-gccgccgcggcgcc 296 |||||||||||||| |||||||||||||| Sbjct: 23084257 ccgccgccgggcctcgccgccgcggcgcc 23084285 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgacctcccccgccgccggc 186 |||||||||||||||||||| Sbjct: 26754998 cgacctcccccgccgccggc 26755017
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 42.1 bits (21), Expect = 1.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 269 ccgccgccgggcct-gccgccgcggcgcc 296 |||||||||||||| |||||||||||||| Sbjct: 22331 ccgccgccgggcctcgccgccgcggcgcc 22303
>ref|XM_511459.1| PREDICTED: Pan troglodytes similar to Phenylethanolamine N-methyltransferase (PNMTase) (Noradrenaline N-methyltransferase) (LOC454634), mRNA Length = 1485 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 930 cgagccgcgcgcctacctccgcaacaac 957
>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete sequence Length = 197843 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ccgccggcttcgcgcggctt 198 |||||||||||||||||||| Sbjct: 108624 ccgccggcttcgcgcggctt 108605
>ref|XM_482484.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1278 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gccggtggtcgccgccgccg 277 |||||||||||||||||||| Sbjct: 430 gccggtggtcgccgccgccg 411
>gb|DQ215641.1| Taeniopygia guttata clone 0058P0005G10 calmodulin 1 internal priming 1-like mRNA, complete sequence Length = 628 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 269 ccgccgccgggcctgccgccgcggcgcc 296 ||||||||||||| |||||||| ||||| Sbjct: 70 ccgccgccgggcccgccgccgccgcgcc 97
>ref|XM_472771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 267 cgccgccgccgggcctgccgccgcggcgcctgtggccgac 306 ||||||||||||| | ||||| ||| |||| ||||||||| Sbjct: 177 cgccgccgccggggccgccgcggcgacgcccgtggccgac 216
>gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0011I07 map S10207, complete sequence Length = 123847 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggcgacctcccccgccgccg 184 |||||||||||||||||||| Sbjct: 27944 ggcgacctcccccgccgccg 27925
>ref|XM_606915.2| PREDICTED: Bos taurus similar to anaplastic lymphoma kinase Ki-1 (LOC528491), partial mRNA Length = 1336 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccagcgagccgcgcgcctcc 78 |||||||||||||||||||| Sbjct: 937 ccagcgagccgcgcgcctcc 918
>ref|XM_362960.1| Magnaporthe grisea 70-15 predicted protein (MG08477.4) partial cds Length = 837 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 ccagcgagccgcgcgcctccctcc 82 ||||||||||| |||||||||||| Sbjct: 403 ccagcgagccgagcgcctccctcc 380
>gb|BC037246.1| Homo sapiens phenylethanolamine N-methyltransferase, mRNA (cDNA clone MGC:34570 IMAGE:5175571), complete cds Length = 1212 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 312 cgagccgcgcgcctacctccgcaacaac 339
>ref|XM_542772.2| PREDICTED: Canis familiaris similar to phospholipase C-like 2, transcript variant 1 (LOC485652), mRNA Length = 4154 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggcgacctcccccgccgccg 184 |||||||||||||||||||| Sbjct: 179 ggcgacctcccccgccgccg 160
>ref|XM_858198.1| PREDICTED: Canis familiaris similar to phospholipase C-like 2, transcript variant 3 (LOC485652), mRNA Length = 3661 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggcgacctcccccgccgccg 184 |||||||||||||||||||| Sbjct: 179 ggcgacctcccccgccgccg 160
>ref|XM_548143.2| PREDICTED: Canis familiaris similar to Phenylethanolamine N-methyltransferase (PNMTase) (Noradrenaline N-methyltransferase) (LOC491023), mRNA Length = 876 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 114 cgagccgcgcgcctacctccgcaacaac 141
>ref|NM_002686.2| Homo sapiens phenylethanolamine N-methyltransferase (PNMT), mRNA Length = 1212 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 312 cgagccgcgcgcctacctccgcaacaac 339
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgc 287 |||||||||||||||||||| Sbjct: 2627506 gccgccgccgggcctgccgc 2627525
>gb|AC079199.9| Homo sapiens chromosome 17, clone RP11-94L15, complete sequence Length = 161815 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 13009 cgagccgcgcgcctacctccgcaacaac 13036
>gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, complete sequence Length = 168585 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 50366 cgagccgcgcgcctacctccgcaacaac 50393
>ref|XM_970066.1| PREDICTED: Tribolium castaneum similar to Stromal interaction molecule homolog precursor (LOC664047), mRNA Length = 2136 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tggtcgccgccgccgggcct 282 |||||||||||||||||||| Sbjct: 1143 tggtcgccgccgccgggcct 1162
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 267 cgccgccgccgggcctgccgccgcggcgcctgtggccgac 306 ||||||||||||| | ||||| ||| |||| ||||||||| Sbjct: 113458 cgccgccgccggggccgccgcggcgacgcccgtggccgac 113419
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cggtggtcgccgccgccggg 279 |||||||||||||||||||| Sbjct: 70713 cggtggtcgccgccgccggg 70694
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 267 cgccgccgccgggcctgccgccgcggcgcctgtggccgac 306 ||||||||||||| | ||||| ||| |||| ||||||||| Sbjct: 7310 cgccgccgccggggccgccgcggcgacgcccgtggccgac 7271
>emb|CR626867.6| Human DNA sequence from clone XX-HCC1954_8J23, complete sequence Length = 89963 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 11264 cgagccgcgcgcctacctccgcaacaac 11291
>emb|CR626880.9| Human DNA sequence from clone XX-HCC1954_11K06, complete sequence Length = 151284 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 39392 cgagccgcgcgcctacctccgcaacaac 39419
>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence Length = 157216 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 99164 cgagccgcgcgcctacctccgcaacaac 99191
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 tcgccgccgccgggcctgccgccg 289 ||||||||||||||| |||||||| Sbjct: 16220 tcgccgccgccgggcttgccgccg 16197
>emb|CR541815.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0132D for gene PNMT, phenylethanolamine N-methyltransferase; complete cds, incl. stopcodon Length = 849 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 90 cgagccgcgcgcctacctccgcaacaac 117
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 cgccgccgccgggcctgccgccgc 290 ||||||||||||| |||||||||| Sbjct: 389353 cgccgccgccggggctgccgccgc 389376
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 267 cgccgccgccgggcctgccgccgcggcgcctgtggccgac 306 ||||||||||||| | ||||| ||| |||| ||||||||| Sbjct: 23117118 cgccgccgccggggccgccgcggcgacgcccgtggccgac 23117079
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggcgacctcccccgccgccg 184 |||||||||||||||||||| Sbjct: 9019370 ggcgacctcccccgccgccg 9019351
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gccggtggtcgccgccgccg 277 |||||||||||||||||||| Sbjct: 20521888 gccggtggtcgccgccgccg 20521869
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ccgccgccgggcctgccgcc 288 |||||||||||||||||||| Sbjct: 4207726 ccgccgccgggcctgccgcc 4207745
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ggtcacgccggtggtcgccg 271 |||||||||||||||||||| Sbjct: 7300022 ggtcacgccggtggtcgccg 7300041 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gccgccgggcctgccgccgc 290 |||||||||||||||||||| Sbjct: 4978150 gccgccgggcctgccgccgc 4978169
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccggtggtcgccgccgccggg 279 ||||||| |||||||||||||||| Sbjct: 3283820 acgccggcggtcgccgccgccggg 3283843
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggccaccctccatccggaga 220 |||||||||||||||||||| Sbjct: 68338 ggccaccctccatccggaga 68357
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tggtcgccgccgccgggcct 282 |||||||||||||||||||| Sbjct: 3508518 tggtcgccgccgccgggcct 3508537
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cgccggtggtcgccgccgcc 276 |||||||||||||||||||| Sbjct: 1411067 cgccggtggtcgccgccgcc 1411086
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cggtggtcgccgccgccggg 279 |||||||||||||||||||| Sbjct: 3324819 cggtggtcgccgccgccggg 3324838
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ccgccgccgggcctgccgcc 288 |||||||||||||||||||| Sbjct: 91348 ccgccgccgggcctgccgcc 91367
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ccgccgccgggcctgccgcc 288 |||||||||||||||||||| Sbjct: 28780 ccgccgccgggcctgccgcc 28799
>dbj|AB116721.1| Oryza sativa (japonica cultivar-group) OASB1 mRNA for anthranilate synthase beta 1 subunit, complete cds Length = 867 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 267 cgccgccgccgggcctgccgccgcggcgcctgtggccgac 306 ||||||||||||| | ||||| ||| |||| ||||||||| Sbjct: 177 cgccgccgccggggccgccgcggcgacgcccgtggccgac 216
>gb|AC153382.1| Mus musculus 10 BAC RP23-9F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206125 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ggggcaggagggcggtcacg 258 |||||||||||||||||||| Sbjct: 19850 ggggcaggagggcggtcacg 19831
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gccggtggtcgccgccgccg 277 |||||||||||||||||||| Sbjct: 25849 gccggtggtcgccgccgccg 25830
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gccggtggtcgccgccgccg 277 |||||||||||||||||||| Sbjct: 152518 gccggtggtcgccgccgccg 152499
>dbj|AK107879.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D04, full insert sequence Length = 1104 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 267 cgccgccgccgggcctgccgccgcggcgcctgtggccgac 306 ||||||||||||| | ||||| ||| |||| ||||||||| Sbjct: 257 cgccgccgccggggccgccgcggcgacgcccgtggccgac 296
>dbj|AK073284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028G10, full insert sequence Length = 1273 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggcgacctcccccgccgccg 184 |||||||||||||||||||| Sbjct: 319 ggcgacctcccccgccgccg 338
>ref|NM_207920.1| Eremothecium gossypii AAR026Wp (AAR026W), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 cgccgccgccgggcctgccgccgc 290 ||||||||||||| |||||||||| Sbjct: 530 cgccgccgccggggctgccgccgc 553
>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete sequence Length = 43144 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 267 cgccgccgccgggcctgccgccgcggcgcctgtggccgac 306 ||||||||||||| | ||||| ||| |||| ||||||||| Sbjct: 38039 cgccgccgccggggccgccgcggcgacgcccgtggccgac 38000
>gb|U35239.1|OCU35239 Oryctolagus cuniculus podocalyxin-like protein 1 (PCLP1) mRNA, complete cds Length = 5313 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 gccgccgccgggcctgccgccgcggcgc 295 ||||||||||||||||||| ||||||| Sbjct: 192 gccgccgccgggcctgccggagcggcgc 219
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggcgacctcccccgccgccg 184 |||||||||||||||||||| Sbjct: 9091067 ggcgacctcccccgccgccg 9091048
>emb|CT025547.17| Mouse DNA sequence from clone RP24-111B7 on chromosome 14, complete sequence Length = 178908 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gccctcaggggcaggagggc 251 |||||||||||||||||||| Sbjct: 141622 gccctcaggggcaggagggc 141603
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgacctcccccgccgccggc 186 |||||||||||||||||||| Sbjct: 30795 cgacctcccccgccgccggc 30814
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggccaccctccatccggaga 220 |||||||||||||||||||| Sbjct: 30595 ggccaccctccatccggaga 30614
>gb|J03280.1|HUMPNMTA Human phenylethanolamine N-methyltransferase gene, complete cds Length = 4174 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 2047 cgagccgcgcgcctacctccgcaacaac 2074
>gb|J03727.1|HUMPNMT Human phenylethanolamine N-methyltransferase mRNA, complete cds Length = 936 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 96 cgagccgcgcgcctacctccgcaacaac 123
>emb|X52730.1|HSPNMTB Human gene for phenylethanolamine N-methylase (PNMT) (EC 2.1.1.28) Length = 3799 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgagccgcgcgcctccctccgcaccaac 90 |||||||||||||| |||||||| |||| Sbjct: 1782 cgagccgcgcgcctacctccgcaacaac 1809 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,359,970 Number of Sequences: 3902068 Number of extensions: 2359970 Number of successful extensions: 54449 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 52358 Number of HSP's gapped (non-prelim): 2170 length of query: 343 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 321 effective length of database: 17,147,199,772 effective search space: 5504251126812 effective search space used: 5504251126812 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
