ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet30c05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A02, full insert sequence Length = 2167 Score = 410 bits (207), Expect = e-111 Identities = 339/383 (88%) Strand = Plus / Plus Query: 34 gccgaggcgccggcgaaacggcccccactcgacaagtacgccctcgcctgcgccatcctc 93 |||| |||||||||||| || || || || ||||||||||| ||| |||||| ||||| Sbjct: 250 gccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctc 309 Query: 94 gcctccatgaactccatcctcctcggctatgacgtctcggtgatgagcggcgcgcagata 153 ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 310 gcctccatgaactccgtcctcctcggctatgatatctcggtgatgagcggcgcgcagata 369 Query: 154 ttcatgaagagggacctgaacatcacggacacgcagatcgagatcctcgccggcatcatc 213 ||||||||| ||| |||| ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 370 ttcatgaaggaggatttgaagatcaccgacacgcagatcgagatcctcgccggcgtcatc 429 Query: 214 aacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccgg 273 ||||||| |||||| | |||||||| ||||||||| ||||||||||||| | |||||| Sbjct: 430 aacatctactcgctgttcggctcgctggcggcgggcatgacgtccgactggctgggccgg 489 Query: 274 cggtacaccatggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctc 333 |||||||||||||| ||||| | | |||||||||| ||||||||||| ||||||||||| Sbjct: 490 cggtacaccatggtgctcgccgccgccatcttcttcacgggcgcgctcctcatgggcctc 549 Query: 334 gccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctac 393 ||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 550 gccccgaactacgcgttcctcatggccggccgcttcgtggccggcatcggcgtcggctac 609 Query: 394 gcgcttatgatcgcgccggtgta 416 ||||| ||||||||||| ||||| Sbjct: 610 gcgctcatgatcgcgcccgtgta 632
>dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J16, full insert sequence Length = 2252 Score = 410 bits (207), Expect = e-111 Identities = 339/383 (88%) Strand = Plus / Plus Query: 34 gccgaggcgccggcgaaacggcccccactcgacaagtacgccctcgcctgcgccatcctc 93 |||| |||||||||||| || || || || ||||||||||| ||| |||||| ||||| Sbjct: 251 gccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctc 310 Query: 94 gcctccatgaactccatcctcctcggctatgacgtctcggtgatgagcggcgcgcagata 153 ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 311 gcctccatgaactccgtcctcctcggctatgatatctcggtgatgagcggcgcgcagata 370 Query: 154 ttcatgaagagggacctgaacatcacggacacgcagatcgagatcctcgccggcatcatc 213 ||||||||| ||| |||| ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 371 ttcatgaaggaggatttgaagatcaccgacacgcagatcgagatcctcgccggcgtcatc 430 Query: 214 aacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccgg 273 ||||||| |||||| | |||||||| ||||||||| ||||||||||||| | |||||| Sbjct: 431 aacatctactcgctgttcggctcgctggcggcgggcatgacgtccgactggctgggccgg 490 Query: 274 cggtacaccatggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctc 333 |||||||||||||| ||||| | | |||||||||| ||||||||||| ||||||||||| Sbjct: 491 cggtacaccatggtgctcgccgccgccatcttcttcacgggcgcgctcctcatgggcctc 550 Query: 334 gccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctac 393 ||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 551 gccccgaactacgcgttcctcatggccggccgcttcgtggccggcatcggcgtcggctac 610 Query: 394 gcgcttatgatcgcgccggtgta 416 ||||| ||||||||||| ||||| Sbjct: 611 gcgctcatgatcgcgcccgtgta 633
>dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F11, full insert sequence Length = 2300 Score = 410 bits (207), Expect = e-111 Identities = 339/383 (88%) Strand = Plus / Plus Query: 34 gccgaggcgccggcgaaacggcccccactcgacaagtacgccctcgcctgcgccatcctc 93 |||| |||||||||||| || || || || ||||||||||| ||| |||||| ||||| Sbjct: 251 gccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctc 310 Query: 94 gcctccatgaactccatcctcctcggctatgacgtctcggtgatgagcggcgcgcagata 153 ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 311 gcctccatgaactccgtcctcctcggctatgatatctcggtgatgagcggcgcgcagata 370 Query: 154 ttcatgaagagggacctgaacatcacggacacgcagatcgagatcctcgccggcatcatc 213 ||||||||| ||| |||| ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 371 ttcatgaaggaggatttgaagatcaccgacacgcagatcgagatcctcgccggcgtcatc 430 Query: 214 aacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccgg 273 ||||||| |||||| | |||||||| ||||||||| ||||||||||||| | |||||| Sbjct: 431 aacatctactcgctgttcggctcgctggcggcgggcatgacgtccgactggctgggccgg 490 Query: 274 cggtacaccatggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctc 333 |||||||||||||| ||||| | | |||||||||| ||||||||||| ||||||||||| Sbjct: 491 cggtacaccatggtgctcgccgccgccatcttcttcacgggcgcgctcctcatgggcctc 550 Query: 334 gccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctac 393 ||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 551 gccccgaactacgcgttcctcatggccggccgcttcgtggccggcatcggcgtcggctac 610 Query: 394 gcgcttatgatcgcgccggtgta 416 ||||| ||||||||||| ||||| Sbjct: 611 gcgctcatgatcgcgcccgtgta 633
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 398 bits (201), Expect = e-108 Identities = 267/289 (92%) Strand = Plus / Plus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| || Sbjct: 5080698 tctcggtgatgagcggcgcgcagaagttcatgaagaaggacctgaacatctcggacgcga 5080757 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 || | ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 5080758 aggtggaggtcctcgccggcatcatcaacatctactcgctcgtcggctcgctcgcggcgg 5080817 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 ||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct: 5080818 gccggacgtccgactggatcggccgtcgctacaccatggtgctcgcgtcggtcatattct 5080877 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 5080878 tcgccggcgcgctcatcatgggcctcgccccgagctacgcgatcgtcatgctcggccgct 5080937 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||||| || || ||||||||||| ||||||||||||||||| Sbjct: 5080938 tcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccggtgta 5080986 Score = 335 bits (169), Expect = 7e-89 Identities = 259/289 (89%) Strand = Plus / Plus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 ||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| Sbjct: 5066967 tctcggtgatgagcggcgcgcagatattcatgaaggaggatttgaagatcaccgacacgc 5067026 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 |||||||||||||||||||| |||||||||||| |||||| | |||||||| ||||||| Sbjct: 5067027 agatcgagatcctcgccggcgtcatcaacatctactcgctgttcggctcgctggcggcgg 5067086 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 || ||||||||||||| | |||||||||||||||||||| ||||| | | |||||||| Sbjct: 5067087 gcatgacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttct 5067146 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 || ||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 5067147 tcacgggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgct 5067206 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 5067207 tcgtggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgta 5067255 Score = 149 bits (75), Expect = 8e-33 Identities = 96/103 (93%) Strand = Plus / Plus Query: 20 ccgacatccccgccgccgaggcgccggcgaaacggcccccactcgacaagtacgccctcg 79 ||||| |||| |||||||||||||||||||| || |||| ||| ||||||||||||||| Sbjct: 5080494 ccgacgtccctgccgccgaggcgccggcgaagcgtgcccccctcaacaagtacgccctcg 5080553 Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5080554 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 5080596 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 34 gccgaggcgccggcgaaacggcccccactcgacaagtacgccctcgcctgcgccatcctc 93 |||| |||||||||||| || || || || ||||||||||| ||| |||||| ||||| Sbjct: 5066774 gccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctc 5066833 Query: 94 gcctccatgaactccatcctcctcggctatg 124 ||||||||||||||| ||||||||||||||| Sbjct: 5066834 gcctccatgaactccgtcctcctcggctatg 5066864
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 398 bits (201), Expect = e-108 Identities = 267/289 (92%) Strand = Plus / Minus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| || Sbjct: 89009 tctcggtgatgagcggcgcgcagaagttcatgaagaaggacctgaacatctcggacgcga 88950 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 || | ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 88949 aggtggaggtcctcgccggcatcatcaacatctactcgctcgtcggctcgctcgcggcgg 88890 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 ||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct: 88889 gccggacgtccgactggatcggccgtcgctacaccatggtgctcgcgtcggtcatattct 88830 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 88829 tcgccggcgcgctcatcatgggcctcgccccgagctacgcgatcgtcatgctcggccgct 88770 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||||| || || ||||||||||| ||||||||||||||||| Sbjct: 88769 tcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccggtgta 88721 Score = 335 bits (169), Expect = 7e-89 Identities = 259/289 (89%) Strand = Plus / Minus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 ||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| Sbjct: 102740 tctcggtgatgagcggcgcgcagatattcatgaaggaggatttgaagatcaccgacacgc 102681 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 |||||||||||||||||||| |||||||||||| |||||| | |||||||| ||||||| Sbjct: 102680 agatcgagatcctcgccggcgtcatcaacatctactcgctgttcggctcgctggcggcgg 102621 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 || ||||||||||||| | |||||||||||||||||||| ||||| | | |||||||| Sbjct: 102620 gcatgacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttct 102561 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 || ||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 102560 tcacgggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgct 102501 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 102500 tcgtggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgta 102452 Score = 149 bits (75), Expect = 8e-33 Identities = 96/103 (93%) Strand = Plus / Minus Query: 20 ccgacatccccgccgccgaggcgccggcgaaacggcccccactcgacaagtacgccctcg 79 ||||| |||| |||||||||||||||||||| || |||| ||| ||||||||||||||| Sbjct: 89213 ccgacgtccctgccgccgaggcgccggcgaagcgtgcccccctcaacaagtacgccctcg 89154 Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89153 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 89111 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 34 gccgaggcgccggcgaaacggcccccactcgacaagtacgccctcgcctgcgccatcctc 93 |||| |||||||||||| || || || || ||||||||||| ||| |||||| ||||| Sbjct: 102933 gccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctc 102874 Query: 94 gcctccatgaactccatcctcctcggctatg 124 ||||||||||||||| ||||||||||||||| Sbjct: 102873 gcctccatgaactccgtcctcctcggctatg 102843
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 398 bits (201), Expect = e-108 Identities = 267/289 (92%) Strand = Plus / Minus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| || Sbjct: 175822 tctcggtgatgagcggcgcgcagaagttcatgaagaaggacctgaacatctcggacgcga 175763 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 || | ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 175762 aggtggaggtcctcgccggcatcatcaacatctactcgctcgtcggctcgctcgcggcgg 175703 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 ||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct: 175702 gccggacgtccgactggatcggccgtcgctacaccatggtgctcgcgtcggtcatattct 175643 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 175642 tcgccggcgcgctcatcatgggcctcgccccgagctacgcgatcgtcatgctcggccgct 175583 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||||| || || ||||||||||| ||||||||||||||||| Sbjct: 175582 tcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccggtgta 175534 Score = 149 bits (75), Expect = 8e-33 Identities = 96/103 (93%) Strand = Plus / Minus Query: 20 ccgacatccccgccgccgaggcgccggcgaaacggcccccactcgacaagtacgccctcg 79 ||||| |||| |||||||||||||||||||| || |||| ||| ||||||||||||||| Sbjct: 176026 ccgacgtccctgccgccgaggcgccggcgaagcgtgcccccctcaacaagtacgccctcg 175967 Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175966 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 175924
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 398 bits (201), Expect = e-108 Identities = 267/289 (92%) Strand = Plus / Plus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| || Sbjct: 5079913 tctcggtgatgagcggcgcgcagaagttcatgaagaaggacctgaacatctcggacgcga 5079972 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 || | ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 5079973 aggtggaggtcctcgccggcatcatcaacatctactcgctcgtcggctcgctcgcggcgg 5080032 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 ||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct: 5080033 gccggacgtccgactggatcggccgtcgctacaccatggtgctcgcgtcggtcatattct 5080092 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 5080093 tcgccggcgcgctcatcatgggcctcgccccgagctacgcgatcgtcatgctcggccgct 5080152 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||||| || || ||||||||||| ||||||||||||||||| Sbjct: 5080153 tcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccggtgta 5080201 Score = 335 bits (169), Expect = 7e-89 Identities = 259/289 (89%) Strand = Plus / Plus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 ||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| Sbjct: 5066182 tctcggtgatgagcggcgcgcagatattcatgaaggaggatttgaagatcaccgacacgc 5066241 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 |||||||||||||||||||| |||||||||||| |||||| | |||||||| ||||||| Sbjct: 5066242 agatcgagatcctcgccggcgtcatcaacatctactcgctgttcggctcgctggcggcgg 5066301 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 || ||||||||||||| | |||||||||||||||||||| ||||| | | |||||||| Sbjct: 5066302 gcatgacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttct 5066361 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 || ||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 5066362 tcacgggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgct 5066421 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 5066422 tcgtggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgta 5066470 Score = 149 bits (75), Expect = 8e-33 Identities = 96/103 (93%) Strand = Plus / Plus Query: 20 ccgacatccccgccgccgaggcgccggcgaaacggcccccactcgacaagtacgccctcg 79 ||||| |||| |||||||||||||||||||| || |||| ||| ||||||||||||||| Sbjct: 5079709 ccgacgtccctgccgccgaggcgccggcgaagcgtgcccccctcaacaagtacgccctcg 5079768 Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5079769 cctgcgccatcctcgcctccatgaactccatcctcctcggcta 5079811 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 34 gccgaggcgccggcgaaacggcccccactcgacaagtacgccctcgcctgcgccatcctc 93 |||| |||||||||||| || || || || ||||||||||| ||| |||||| ||||| Sbjct: 5065989 gccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctc 5066048 Query: 94 gcctccatgaactccatcctcctcggctatg 124 ||||||||||||||| ||||||||||||||| Sbjct: 5066049 gcctccatgaactccgtcctcctcggctatg 5066079
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0064E16, from chromosome 3, complete sequence Length = 139123 Score = 335 bits (169), Expect = 7e-89 Identities = 259/289 (89%) Strand = Plus / Plus Query: 128 tctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgc 187 ||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| Sbjct: 131421 tctcggtgatgagcggcgcgcagatattcatgaaggaggatttgaagatcaccgacacgc 131480 Query: 188 agatcgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgg 247 |||||||||||||||||||| |||||||||||| |||||| | |||||||| ||||||| Sbjct: 131481 agatcgagatcctcgccggcgtcatcaacatctactcgctgttcggctcgctggcggcgg 131540 Query: 248 gccggacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttct 307 || ||||||||||||| | |||||||||||||||||||| ||||| | | |||||||| Sbjct: 131541 gcatgacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttct 131600 Query: 308 tcgcgggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgct 367 || ||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 131601 tcacgggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgct 131660 Query: 368 tcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||||||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 131661 tcgtggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgta 131709 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 34 gccgaggcgccggcgaaacggcccccactcgacaagtacgccctcgcctgcgccatcctc 93 |||| |||||||||||| || || || || ||||||||||| ||| |||||| ||||| Sbjct: 131228 gccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctc 131287 Query: 94 gcctccatgaactccatcctcctcggctatg 124 ||||||||||||||| ||||||||||||||| Sbjct: 131288 gcctccatgaactccgtcctcctcggctatg 131318
>gb|BT009264.1| Triticum aestivum clone wlk8.pk0001.a11:fis, full insert mRNA sequence Length = 2109 Score = 208 bits (105), Expect = 1e-50 Identities = 285/345 (82%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctc 131 |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct: 158 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgacatcgg 217 Query: 132 ggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggacacgcagat 191 ||||||||||| ||| | | | ||| ||| ||| ||||| |||| ||||| ||| | Sbjct: 218 cgtgatgagcggagcgtcgctgtacatccagaaggatctgaagatcaacgacacccagct 277 Query: 192 cgagatcctcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccg 251 ||| ||||| |||||| ||||| | | ||||||| | ||||| |||||||||| || Sbjct: 278 ggaggtcctcatgggcatcctcaacgtgtactcgctcattggctccttcgcggcggggcg 337 Query: 252 gacgtccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgc 311 |||||||||||||||||||||||| | |||||| ||| |||| | |||||||||||||| Sbjct: 338 gacgtccgactggatcggccggcgcttcaccatcgtcttcgccgccgtcatcttcttcgc 397 Query: 312 gggcgcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgt 371 |||||| |||||||||||| || || | |||||| | |||||| ||||||||||||| Sbjct: 398 gggcgccctcatcatgggcttctccgtcaactacgccatgctcatgttcggccgcttcgt 457 Query: 372 ggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 ||||||| ||||||| || ||||| || ||||||||||| ||||| Sbjct: 458 ggccggcatcggcgtggggtacgctctcatgatcgcgcccgtgta 502
>ref|XM_478892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1961 Score = 157 bits (79), Expect = 3e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 222 ctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccggcggtacac 281 ||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 286 ctcgctcatcggctccttcgcggcggggcggacgtcggactggatcggccggcggtacac 345 Query: 282 catggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctcgccccgag 341 ||| || |||| | ||||| ||||||||||| ||| || ||||||| ||||| | Sbjct: 346 catcgtgttcgccgccgtcatattcttcgcgggggcgttcctcatggggttcgccgtcaa 405 Query: 342 ctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttat 401 |||||| | |||||| |||||||||||||||||||| ||||||| ||||||||||| || Sbjct: 406 ctacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgctcat 465 Query: 402 gatcgcgccggtgta 416 ||||||||||||||| Sbjct: 466 gatcgcgccggtgta 480 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctc 131 |||| ||||||||||||||||||||||||||| |||||||||||||||||| || || Sbjct: 136 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 195 Query: 132 ggtgatgagcgg 143 |||||||||||| Sbjct: 196 ggtgatgagcgg 207
>ref|XM_506429.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1301_C12.3 mRNA Length = 1962 Score = 157 bits (79), Expect = 3e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 222 ctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccggcggtacac 281 ||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 287 ctcgctcatcggctccttcgcggcggggcggacgtcggactggatcggccggcggtacac 346 Query: 282 catggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctcgccccgag 341 ||| || |||| | ||||| ||||||||||| ||| || ||||||| ||||| | Sbjct: 347 catcgtgttcgccgccgtcatattcttcgcgggggcgttcctcatggggttcgccgtcaa 406 Query: 342 ctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttat 401 |||||| | |||||| |||||||||||||||||||| ||||||| ||||||||||| || Sbjct: 407 ctacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgctcat 466 Query: 402 gatcgcgccggtgta 416 ||||||||||||||| Sbjct: 467 gatcgcgccggtgta 481 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctc 131 |||| ||||||||||||||||||||||||||| |||||||||||||||||| || || Sbjct: 137 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 196 Query: 132 ggtgatgagcgg 143 |||||||||||| Sbjct: 197 ggtgatgagcgg 208
>gb|AF416867.1|AF416867 Oryza sativa putative sugar transporter mRNA, complete cds Length = 1860 Score = 157 bits (79), Expect = 3e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 222 ctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccggcggtacac 281 ||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 413 ctcgctcatcggctccttcgcggcggggcggacgtcggactggatcggccggcggtacac 472 Query: 282 catggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctcgccccgag 341 ||| || |||| | ||||| ||||||||||| ||| || ||||||| ||||| | Sbjct: 473 catcgtgttcgccgccgtcatattcttcgcgggggcgttcctcatggggttcgccgtcaa 532 Query: 342 ctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttat 401 |||||| | |||||| |||||||||||||||||||| ||||||| ||||||||||| || Sbjct: 533 ctacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgctcat 592 Query: 402 gatcgcgccggtgta 416 ||||||||||||||| Sbjct: 593 gatcgcgccggtgta 607 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctc 131 |||| ||||||||||||||||||||||||||| |||||||||||||||||| || || Sbjct: 263 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 322 Query: 132 ggtgatgagcgg 143 |||||||||||| Sbjct: 323 ggtgatgagcgg 334
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 157 bits (79), Expect = 3e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 222 ctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccggcggtacac 281 ||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 23529076 ctcgctcatcggctccttcgcggcggggcggacgtcggactggatcggccggcggtacac 23529135 Query: 282 catggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctcgccccgag 341 ||| || |||| | ||||| ||||||||||| ||| || ||||||| ||||| | Sbjct: 23529136 catcgtgttcgccgccgtcatattcttcgcgggggcgttcctcatggggttcgccgtcaa 23529195 Query: 342 ctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttat 401 |||||| | |||||| |||||||||||||||||||| ||||||| ||||||||||| || Sbjct: 23529196 ctacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgctcat 23529255 Query: 402 gatcgcgccggtgta 416 ||||||||||||||| Sbjct: 23529256 gatcgcgccggtgta 23529270 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 |||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 23528827 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggcta 23528877 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 352 ctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccg 411 |||||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||| Sbjct: 23532411 ctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgatcgcgccc 23532352 Query: 412 gtgta 416 ||||| Sbjct: 23532351 gtgta 23532347 Score = 60.0 bits (30), Expect = 6e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 205 ggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactgg 264 |||||| | ||||||| ||||||||| ||||| |||| ||||| ||||| | |||||| Sbjct: 23532558 ggcatcctgaacatctactcgctcgtcggctccttcgccgcggggaggacggcggactgg 23532499 Query: 265 atcggccggcggtacacc 282 ||||||||||||| |||| Sbjct: 23532498 atcggccggcggttcacc 23532481 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggctatg 124 ||||||||||||||||||||||| ||||||| | |||||||||| Sbjct: 23532825 cctgcgccatcctcgcctccatggcctccatcattctcggctatg 23532781
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 157 bits (79), Expect = 3e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 222 ctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccggcggtacac 281 ||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 89469 ctcgctcatcggctccttcgcggcggggcggacgtcggactggatcggccggcggtacac 89528 Query: 282 catggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctcgccccgag 341 ||| || |||| | ||||| ||||||||||| ||| || ||||||| ||||| | Sbjct: 89529 catcgtgttcgccgccgtcatattcttcgcgggggcgttcctcatggggttcgccgtcaa 89588 Query: 342 ctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttat 401 |||||| | |||||| |||||||||||||||||||| ||||||| ||||||||||| || Sbjct: 89589 ctacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgctcat 89648 Query: 402 gatcgcgccggtgta 416 ||||||||||||||| Sbjct: 89649 gatcgcgccggtgta 89663 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 |||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 89220 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggcta 89270 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 352 ctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccg 411 |||||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||| Sbjct: 92804 ctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgatcgcgccc 92745 Query: 412 gtgta 416 ||||| Sbjct: 92744 gtgta 92740 Score = 60.0 bits (30), Expect = 6e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 205 ggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactgg 264 |||||| | ||||||| ||||||||| ||||| |||| ||||| ||||| | |||||| Sbjct: 92951 ggcatcctgaacatctactcgctcgtcggctccttcgccgcggggaggacggcggactgg 92892 Query: 265 atcggccggcggtacacc 282 ||||||||||||| |||| Sbjct: 92891 atcggccggcggttcacc 92874 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggctatg 124 ||||||||||||||||||||||| ||||||| | |||||||||| Sbjct: 93218 cctgcgccatcctcgcctccatggcctccatcattctcggctatg 93174
>dbj|AK102676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102G08, full insert sequence Length = 1961 Score = 157 bits (79), Expect = 3e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 222 ctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccggcggtacac 281 ||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 286 ctcgctcatcggctccttcgcggcggggcggacgtcggactggatcggccggcggtacac 345 Query: 282 catggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctcgccccgag 341 ||| || |||| | ||||| ||||||||||| ||| || ||||||| ||||| | Sbjct: 346 catcgtgttcgccgccgtcatattcttcgcgggggcgttcctcatggggttcgccgtcaa 405 Query: 342 ctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttat 401 |||||| | |||||| |||||||||||||||||||| ||||||| ||||||||||| || Sbjct: 406 ctacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgctcat 465 Query: 402 gatcgcgccggtgta 416 ||||||||||||||| Sbjct: 466 gatcgcgccggtgta 480 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctc 131 |||| ||||||||||||||||||||||||||| |||||||||||||||||| || || Sbjct: 136 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 195 Query: 132 ggtgatgagcgg 143 |||||||||||| Sbjct: 196 ggtgatgagcgg 207
>dbj|AK059423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E03, full insert sequence Length = 1962 Score = 157 bits (79), Expect = 3e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 222 ctcgctcgtgggctcgctcgcggcgggccggacgtccgactggatcggccggcggtacac 281 ||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 287 ctcgctcatcggctccttcgcggcggggcggacgtcggactggatcggccggcggtacac 346 Query: 282 catggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatcatgggcctcgccccgag 341 ||| || |||| | ||||| ||||||||||| ||| || ||||||| ||||| | Sbjct: 347 catcgtgttcgccgccgtcatattcttcgcgggggcgttcctcatggggttcgccgtcaa 406 Query: 342 ctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttat 401 |||||| | |||||| |||||||||||||||||||| ||||||| ||||||||||| || Sbjct: 407 ctacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgctcat 466 Query: 402 gatcgcgccggtgta 416 ||||||||||||||| Sbjct: 467 gatcgcgccggtgta 481 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 72 cgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctc 131 |||| ||||||||||||||||||||||||||| |||||||||||||||||| || || Sbjct: 137 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 196 Query: 132 ggtgatgagcgg 143 |||||||||||| Sbjct: 197 ggtgatgagcgg 208
>ref|NM_189409.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 101 bits (51), Expect = 2e-18 Identities = 168/207 (81%) Strand = Plus / Plus Query: 204 cggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactg 263 ||||||| ||||| ||| ||| ||||| ||||| |||| || |||||||| |||||||| Sbjct: 132 cggcatcctcaacctctactccctcgtcggctccttcgccgccggccggacctccgactg 191 Query: 264 gatcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgcgggcgcgctcat 323 ||||||||| || |||||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 192 gatcggccgccgcctcaccatcatcctcgccgcggtcatcttcttcgtcggcgccatcat 251 Query: 324 catgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcgg 383 ||||||||| || | |||| | | |||||| |||||||||||| |||||| |||| Sbjct: 252 gatgggcctctccgtcaactaccccatgctcatggccggccgcttcgtcgccggcatcgg 311 Query: 384 cgtcggctacgcgcttatgatcgcgcc 410 |||||||||||| | ||||||||||| Sbjct: 312 cgtcggctacgccttcatgatcgcgcc 338
>ref|XM_478893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Plus Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctcggtgatga 139 ||||||||||||||||||||||| ||||||| | |||||||||||| || |||||||| Sbjct: 71 cctgcgccatcctcgcctccatggcctccatcattctcggctatgacatcggggtgatga 130 Query: 140 gcggcgcgcagatattcatgaagagggacctgaacatcacggacacgcagatcgagatcc 199 ||||||| | | | ||| |||| |||||||| ||||| ||| |||| | ||||||| Sbjct: 131 gcggcgcatcgctgtacatcaagaaagacctgaagatcactgacgtgcaggtggagatcc 190 Query: 200 tcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccg 259 | |||||| | ||||||| ||||||||| ||||| |||| ||||| ||||| | | Sbjct: 191 tgatgggcatcctgaacatctactcgctcgtcggctccttcgccgcggggaggacggcgg 250 Query: 260 actggatcggccggcggtacacc 282 |||||||||||||||||| |||| Sbjct: 251 actggatcggccggcggttcacc 273 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 352 ctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccg 411 |||||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||| Sbjct: 343 ctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgatcgcgccc 402 Query: 412 gtgta 416 ||||| Sbjct: 403 gtgta 407
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 2e-18 Identities = 168/207 (81%) Strand = Plus / Minus Query: 204 cggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactg 263 ||||||| ||||| ||| ||| ||||| ||||| |||| || |||||||| |||||||| Sbjct: 42630228 cggcatcctcaacctctactccctcgtcggctccttcgccgccggccggacctccgactg 42630169 Query: 264 gatcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgcgggcgcgctcat 323 ||||||||| || |||||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 42630168 gatcggccgccgcctcaccatcatcctcgccgcggtcatcttcttcgtcggcgccatcat 42630109 Query: 324 catgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcgg 383 ||||||||| || | |||| | | |||||| |||||||||||| |||||| |||| Sbjct: 42630108 gatgggcctctccgtcaactaccccatgctcatggccggccgcttcgtcgccggcatcgg 42630049 Query: 384 cgtcggctacgcgcttatgatcgcgcc 410 |||||||||||| | ||||||||||| Sbjct: 42630048 cgtcggctacgccttcatgatcgcgcc 42630022
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 101 bits (51), Expect = 2e-18 Identities = 168/207 (81%) Strand = Plus / Minus Query: 204 cggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccgactg 263 ||||||| ||||| ||| ||| ||||| ||||| |||| || |||||||| |||||||| Sbjct: 151111 cggcatcctcaacctctactccctcgtcggctccttcgccgccggccggacctccgactg 151052 Query: 264 gatcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgcgggcgcgctcat 323 ||||||||| || |||||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 151051 gatcggccgccgcctcaccatcatcctcgccgcggtcatcttcttcgtcggcgccatcat 150992 Query: 324 catgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcgg 383 ||||||||| || | |||| | | |||||| |||||||||||| |||||| |||| Sbjct: 150991 gatgggcctctccgtcaactaccccatgctcatggccggccgcttcgtcgccggcatcgg 150932 Query: 384 cgtcggctacgcgcttatgatcgcgcc 410 |||||||||||| | ||||||||||| Sbjct: 150931 cgtcggctacgccttcatgatcgcgcc 150905
>dbj|AK119464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-F04, full insert sequence Length = 1620 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Plus Query: 80 cctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctcggtgatga 139 ||||||||||||||||||||||| ||||||| | |||||||||||| || |||||||| Sbjct: 59 cctgcgccatcctcgcctccatggcctccatcattctcggctatgacatcggggtgatga 118 Query: 140 gcggcgcgcagatattcatgaagagggacctgaacatcacggacacgcagatcgagatcc 199 ||||||| | | | ||| |||| |||||||| ||||| ||| |||| | ||||||| Sbjct: 119 gcggcgcatcgctgtacatcaagaaagacctgaagatcactgacgtgcaggtggagatcc 178 Query: 200 tcgccggcatcatcaacatcttctcgctcgtgggctcgctcgcggcgggccggacgtccg 259 | |||||| | ||||||| ||||||||| ||||| |||| ||||| ||||| | | Sbjct: 179 tgatgggcatcctgaacatctactcgctcgtcggctccttcgccgcggggaggacggcgg 238 Query: 260 actggatcggccggcggtacacc 282 |||||||||||||||||| |||| Sbjct: 239 actggatcggccggcggttcacc 261 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 352 ctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccg 411 |||||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||| Sbjct: 331 ctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgatcgcgccc 390 Query: 412 gtgta 416 ||||| Sbjct: 391 gtgta 395
>ref|NM_196021.1| Oryza sativa (japonica cultivar-group) putative mannitol transporter protein (OSJNBb0076H04.3), mRNA Length = 1521 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 360 cggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 330 cggccgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgta 386
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 360 cggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 141623 cggccgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgta 141679
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 360 cggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 19733 cggccgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgta 19789
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 360 cggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 10539228 cggccgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgta 10539172
>dbj|AK121279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108G21, full insert sequence Length = 1998 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 360 cggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 526 cggccgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgta 582
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 360 cggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggtgta 416 |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 10545267 cggccgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgta 10545211
>gb|AY100638.1| Prunus cerasus putative sorbitol transporter (SorT2) mRNA, complete cds Length = 2032 Score = 67.9 bits (34), Expect = 2e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 256 tccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgcgggc 315 ||||||||||||||||| ||||||||||| |||||||| | |||||||||||| || Sbjct: 359 tccgactggatcggccgtcggtacaccatagtcctcgctggagccatcttcttcgccgga 418 Query: 316 gcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggcc 375 || ||| ||||||| | ||||| | ||| || | |||||| ||||||| || || ||| Sbjct: 419 gctctcctcatgggatttgcccccaactatgcctttctcatgttcggccggtttgtcgcc 478 Query: 376 ggcgtcggcgtcggctacgcgcttatgatcgcgccggt 413 || | || ||||||||||| || |||||||| ||||| Sbjct: 479 ggaattggagtcggctacgccctcatgatcgctccggt 516
>gb|AY136668.1| Orobanche ramosa putative mannitol transporter (MaT1) mRNA, complete cds Length = 1648 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 367 ttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccggt 413 |||||||| || ||||||||||||||||||| |||||||||||||| Sbjct: 433 ttcgtggctgggctcggcgtcggctacgcgctgatgatcgcgccggt 479
>gb|AF482011.1| Prunus cerasus sorbitol transporter mRNA, complete cds Length = 1927 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 323 tcatgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcg 382 |||||||| | ||| ||| |||||| |||||||| |||| || ||||| ||||| ||| Sbjct: 384 tcatgggcttggccacgaactacgccttcctcatggtcggtcggttcgtagccggaatcg 443 Query: 383 gcgtcggctacgcgcttatgatcgcgccggt 413 ||||||||||||| || |||||||| ||||| Sbjct: 444 gcgtcggctacgccctcatgatcgctccggt 474
>dbj|AB125648.1| Malus x domestica MdSOT5 mRNA for sorbitol transporter, complete cds Length = 1980 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Plus Query: 266 tcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgcgggcgcgctcatca 325 ||||||| ||||||||||| |||||||| | ||||||||||| || || ||| ||| Sbjct: 419 tcggccgccggtacaccatagtcctcgccggagccatcttcttcgtcggggctctcctca 478 Query: 326 tgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggccggcgtcggcg 385 |||| ||||| | | |||| | |||||||| ||||||| || || ||||| |||||| Sbjct: 479 tgggattcgccaccaactactccttcctcatgttcggccgatttgttgccggaatcggcg 538 Query: 386 tcggctacgcgcttatgatcgcgccggtgta 416 |||||||||| || ||||| || |||||||| Sbjct: 539 tcggctacgccctcatgattgctccggtgta 569
>dbj|AB125647.1| Malus x domestica MdSOT4 mRNA for sorbitol transporter, complete cds Length = 2173 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 350 tcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgc 395 |||||||| |||||||||||| |||||| |||||||||||||||| Sbjct: 494 tcctcatgtgcggccgcttcgtcgccggcctcggcgtcggctacgc 539 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 tcacggacacgcagatcgagatcct 200 ||||||||||||| ||||||||||| Sbjct: 320 tcacggacacgcaaatcgagatcct 344
>dbj|AK106745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B11, full insert sequence Length = 1614 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgt 128 ||||||| ||| |||||||| |||||||||||||| | |||||||| | ||||| | | Sbjct: 125 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctcatgggctacaatct 184 Query: 129 ctcggtgatgagcggcgcgcag 150 | || ||||||||||||||||| Sbjct: 185 cgcgctgatgagcggcgcgcag 206
>ref|XM_473267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 76 ctcgcctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||| ||||||| | ||| |||||||||||||||| Sbjct: 121 ctcgcctgcgccatcttcgcctcgctcaacgccatcctcctcggcta 167
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 76 ctcgcctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||| ||||||| | ||| |||||||||||||||| Sbjct: 18850 ctcgcctgcgccatcttcgcctcgctcaacgccatcctcctcggcta 18804
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 76 ctcgcctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||| ||||||| | ||| |||||||||||||||| Sbjct: 26481963 ctcgcctgcgccatcttcgcctcgctcaacgccatcctcctcggcta 26481917 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ggccggcgtcggcgtcggct 391 |||||||||||||||||||| Sbjct: 28170293 ggccggcgtcggcgtcggct 28170274 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atcctcgccggcatcatcaa 215 |||||||||||||||||||| Sbjct: 3034872 atcctcgccggcatcatcaa 3034853 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atcctcgccggcatcatcaa 215 |||||||||||||||||||| Sbjct: 3027366 atcctcgccggcatcatcaa 3027347
>dbj|AK099395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J11, full insert sequence Length = 1857 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 81 ctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctcggtgatgag 140 ||||||| ||||||||||||||| ||| ||||| | ||||| |||| |||||| ||| Sbjct: 131 ctgcgccgtcctcgcctccatgacgtccgtcctcatgggctacaacgtggcggtgacgag 190 Query: 141 cggcgcgcagatattcatg 159 ||| |||||||| |||||| Sbjct: 191 cggggcgcagatcttcatg 209
>dbj|AK069679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O21, full insert sequence Length = 2251 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 76 ctcgcctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||| ||||||| | ||| |||||||||||||||| Sbjct: 272 ctcgcctgcgccatcttcgcctcgctcaacgccatcctcctcggcta 318
>dbj|AK061613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B07, full insert sequence Length = 1729 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 81 ctgcgccatcctcgcctccatgaactccatcctcctcggctatgacgtctcggtgatgag 140 ||||||| ||||||||||||||| ||| ||||| | ||||| |||| |||||| ||| Sbjct: 125 ctgcgccgtcctcgcctccatgacgtccgtcctcatgggctacaacgtggcggtgacgag 184 Query: 141 cggcgcgcagatattcatg 159 ||| |||||||| |||||| Sbjct: 185 cggggcgcagatcttcatg 203
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 76 ctcgcctgcgccatcctcgcctccatgaactccatcctcctcggcta 122 ||||||||||||||| ||||||| | ||| |||||||||||||||| Sbjct: 122603 ctcgcctgcgccatcttcgcctcgctcaacgccatcctcctcggcta 122557
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 113021 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 112976 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 100770 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 100725 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 77 tcgcctgcgccatcctcgcctccatgaactccatcctc 114 |||||||||||| ||||||||||||| | |||||||| Sbjct: 122079 tcgcctgcgccacgctcgcctccatgaccaccatcctc 122042
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 109328 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 109373 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 97077 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 97122 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 77 tcgcctgcgccatcctcgcctccatgaactccatcctc 114 |||||||||||| ||||||||||||| | |||||||| Sbjct: 88019 tcgcctgcgccacgctcgcctccatgaccaccatcctc 88056
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 24311912 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 24311867 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 24299661 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 24299616 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 77 tcgcctgcgccatcctcgcctccatgaactccatcctc 114 |||||||||||| ||||||||||||| | |||||||| Sbjct: 24320970 tcgcctgcgccacgctcgcctccatgaccaccatcctc 24320933 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggccgccgacatccccgccgccga 38 |||||||| ||||||||||||||| Sbjct: 25793389 ggccgccgccatccccgccgccga 25793366
>dbj|AK119762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-G08, full insert sequence Length = 1638 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 150 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 195
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 24623581 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 24623536 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 69 gtacgccctcgcctgcgccatcctcgcctccatgaactccatcctc 114 ||||||| ||| |||||||| |||||||||||||| | |||||||| Sbjct: 24611330 gtacgccttcggctgcgccaccctcgcctccatgaccaccatcctc 24611285 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 77 tcgcctgcgccatcctcgcctccatgaactccatcctc 114 |||||||||||| ||||||||||||| | |||||||| Sbjct: 24632639 tcgcctgcgccacgctcgcctccatgaccaccatcctc 24632602 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggccgccgacatccccgccgccga 38 |||||||| ||||||||||||||| Sbjct: 26112059 ggccgccgccatccccgccgccga 26112036
>gb|BT009301.1| Triticum aestivum clone wlm1.pk0012.h1:fis, full insert mRNA sequence Length = 1872 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 352 ctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgcgcttatgatcgcgccg 411 |||||| ||||||||||||| ||||| ||||||| |||||||| | ||| ||||||| Sbjct: 464 ctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcatggtcgcgcca 523 Query: 412 gtgta 416 ||||| Sbjct: 524 gtgta 528 Score = 44.1 bits (22), Expect = 0.36 Identities = 94/118 (79%) Strand = Plus / Plus Query: 66 caagtacgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctatga 125 |||||||||| || |||||||| || || |||||| | ||||| |||||||||| || Sbjct: 178 caagtacgccttcacctgcgccctctgtgcttccatggccaccatcgtcctcggctacga 237 Query: 126 cgtctcggtgatgagcggcgcgcagatattcatgaagagggacctgaacatcacggac 183 ||| |||||||||||| ||| | | | ||| |||||||||||| | ||||||||| Sbjct: 238 cgttggggtgatgagcggtgcgtcgctgtacatcaagagggacctgcagatcacggac 295
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 ccctcgcctgcgccatcctcgcc 96 ||||||||||||||||||||||| Sbjct: 24256110 ccctcgcctgcgccatcctcgcc 24256132
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Plus Query: 176 tcacggacacgcagatcgagatcctcg 202 |||||||||||||| |||||||||||| Sbjct: 6473527 tcacggacacgcagctcgagatcctcg 6473553
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 ccctcgcctgcgccatcctcgcc 96 ||||||||||||||||||||||| Sbjct: 122449 ccctcgcctgcgccatcctcgcc 122471
>dbj|AK073673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047P09, full insert sequence Length = 1320 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 ccctcgcctgcgccatcctcgcc 96 ||||||||||||||||||||||| Sbjct: 190 ccctcgcctgcgccatcctcgcc 212
>gb|BC068843.1| Xenopus laevis hypothetical protein MGC81498, mRNA (cDNA clone MGC:81498 IMAGE:6636906), complete cds Length = 1848 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 attcatgaagagggacctgaac 174 |||||||||||||||||||||| Sbjct: 140 attcatgaagagggacctgaac 161
>gb|AY592976.1| Malus x domestica sorbitol transporter (SOT1) mRNA, complete cds Length = 2010 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 350 tcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgc 395 |||||||| ||||||||| || |||||| |||| ||||||||||| Sbjct: 354 tcctcatgtgcggccgctttgtcgccggcatcggagtcggctacgc 399
>ref|XM_447837.1| Candida glabrata CBS138, CAGL0J03058g partial mRNA Length = 1731 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 cgtggccggcgtcggcgtcggc 390 |||||||||||||||||||||| Sbjct: 619 cgtggccggcgtcggcgtcggc 598
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 369 cgtggccggcgtcggcgtcggc 390 |||||||||||||||||||||| Sbjct: 291043 cgtggccggcgtcggcgtcggc 291064
>gb|AY237400.1| Malus x domestica sorbitol transporter (SOT1) mRNA, complete cds Length = 2012 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 350 tcctcatgctcggccgcttcgtggccggcgtcggcgtcggctacgc 395 |||||||| ||||||||| || |||||| |||| ||||||||||| Sbjct: 354 tcctcatgtgcggccgctttgtcgccggcatcggagtcggctacgc 399
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gacatccccgccgccgaggcg 42 ||||||||||||||||||||| Sbjct: 2648405 gacatccccgccgccgaggcg 2648385
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence Length = 166568 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tccatgaactccatcctcctc 117 ||||||||||||||||||||| Sbjct: 131980 tccatgaactccatcctcctc 131960
>emb|CR646489.2|CNS0EXSV Tetraodon nigroviridis full-length cDNA Length = 1310 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atcctcgcctccatgaactcc 108 ||||||||||||||||||||| Sbjct: 379 atcctcgcctccatgaactcc 399
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 tgctcggccgcttcgtggccg 376 ||||||||||||||||||||| Sbjct: 199664 tgctcggccgcttcgtggccg 199684
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 gcgggcgcgctcatcatgggc 330 ||||||||||||||||||||| Sbjct: 1733582 gcgggcgcgctcatcatgggc 1733602
>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete sequence Length = 243114 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tccatgaactccatcctcctc 117 ||||||||||||||||||||| Sbjct: 174866 tccatgaactccatcctcctc 174886
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 gccgccgaggcgccggcgaaacggcccc 58 ||||||| ||||||||||| |||||||| Sbjct: 2432264 gccgccgcggcgccggcgagacggcccc 2432291
>ref|XM_451031.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A00737g predicted mRNA Length = 1749 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcgcgcagatattcatgaag 162 |||||||||||||||||||| Sbjct: 732 gcgcgcagatattcatgaag 751
>gb|AC126057.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026D16, complete sequence Length = 129166 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggccgccgacatccccgccgccga 38 |||||||| ||||||||||||||| Sbjct: 21222 ggccgccgccatccccgccgccga 21199
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ttcgcgggcgcgctcatcat 326 |||||||||||||||||||| Sbjct: 753821 ttcgcgggcgcgctcatcat 753802 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcgcgggcgcgctcatcat 326 |||||||||||||||||||| Sbjct: 22556 ttcgcgggcgcgctcatcat 22575
>gb|AF036698.1| Caenorhabditis elegans cosmid B0273, complete sequence Length = 44318 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctccatgaactccatcctcc 115 |||||||||||||||||||| Sbjct: 15196 ctccatgaactccatcctcc 15215
>gb|BC091590.1| Xenopus tropicalis MGC97550 protein, mRNA (cDNA clone MGC:97550 IMAGE:5383973), complete cds Length = 2400 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 attcatgaagagggacctga 172 |||||||||||||||||||| Sbjct: 95 attcatgaagagggacctga 114
>gb|DQ115337.1| Caenorhabditis remanei netrin receptor (unc-5) mRNA, partial cds Length = 798 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ctccatgaactccatcctcc 115 |||||||||||||||||||| Sbjct: 237 ctccatgaactccatcctcc 218
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccgccgacatccccgccgcc 36 |||||||||||||||||||| Sbjct: 1855617 ccgccgacatccccgccgcc 1855598
>ref|NM_001030463.1| Xenopus tropicalis MGC97550 protein (MGC97550), mRNA Length = 2400 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 attcatgaagagggacctga 172 |||||||||||||||||||| Sbjct: 95 attcatgaagagggacctga 114
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcgcgcagatattcatgaag 162 |||||||||||||||||||| Sbjct: 72964 gcgcgcagatattcatgaag 72983
>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11, complete sequence Length = 115006 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ggccggcgtcggcgtcggct 391 |||||||||||||||||||| Sbjct: 56730 ggccggcgtcggcgtcggct 56711
>dbj|AB225819.1| Aspergillus oryzae cDNA, contig sequence: AoEST2674 Length = 1663 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gtgggctcgctcgcggcggg 248 |||||||||||||||||||| Sbjct: 1116 gtgggctcgctcgcggcggg 1097
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gtgggctcgctcgcggcggg 248 |||||||||||||||||||| Sbjct: 2544121 gtgggctcgctcgcggcggg 2544102
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggccgccgacatccccgccgccga 38 |||||||| ||||||||||||||| Sbjct: 105732 ggccgccgccatccccgccgccga 105709
>gb|S45164.1| hydroxyproline-rich glycoprotein [maize, Genomic, 1703 nt] Length = 1703 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gtggccggcgtcggcgtcgg 389 |||||||||||||||||||| Sbjct: 281 gtggccggcgtcggcgtcgg 262
>gb|S47165.1|S47134S6 Caenorhabditis elegans UNC-5 (unc-5) gene, exon 6 Length = 387 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ctccatgaactccatcctcc 115 |||||||||||||||||||| Sbjct: 251 ctccatgaactccatcctcc 232
>dbj|AK080819.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230312P06 product:RIKEN cDNA 1110059F19 gene, full insert sequence Length = 2013 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tggccgccgacatccccgccgccg 37 |||||||||||| ||||||||||| Sbjct: 456 tggccgccgacacccccgccgccg 479
>ref|NM_068421.3| Caenorhabditis elegans UNCoordinated family member (unc-5) (unc-5) mRNA, complete cds Length = 2146 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ctccatgaactccatcctcc 115 |||||||||||||||||||| Sbjct: 844 ctccatgaactccatcctcc 825
>ref|NM_068422.3| Caenorhabditis elegans UNCoordinated family member (unc-5) (unc-5) mRNA, complete cds Length = 3012 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ctccatgaactccatcctcc 115 |||||||||||||||||||| Sbjct: 844 ctccatgaactccatcctcc 825
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 360 cggccgcttcgtggccggcgtcggcgtcggct 391 |||||||| ||| || |||||||||||||||| Sbjct: 4221238 cggccgctgcgtcgctggcgtcggcgtcggct 4221269
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ggccggcgtcggcgtcggct 391 |||||||||||||||||||| Sbjct: 16033555 ggccggcgtcggcgtcggct 16033536
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggccggcgtcggcgtcggct 391 |||||||||||||||||||| Sbjct: 24353178 ggccggcgtcggcgtcggct 24353197
>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete sequence Length = 163063 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccatgaactccatcctcct 116 |||||||||||||||||||| Sbjct: 85921 tccatgaactccatcctcct 85902
>gb|AE004478.1| Pseudomonas aeruginosa PAO1, section 39 of 529 of the complete genome Length = 15580 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgccgccgaggcgccggcga 49 |||||||||||||||||||| Sbjct: 4083 cgccgccgaggcgccggcga 4064
>gb|AF492560.1| Corynebacterium diphtheriae plasmid pNG2, complete sequence Length = 15100 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ttcgcgggcgcgctcatcat 326 |||||||||||||||||||| Sbjct: 5231 ttcgcgggcgcgctcatcat 5250
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cgccgacatccccgccgccg 37 |||||||||||||||||||| Sbjct: 4955496 cgccgacatccccgccgccg 4955477 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 16 gccgccgacatccccgccgccgaggcgc 43 |||||||||||| |||| |||||||||| Sbjct: 4017653 gccgccgacatcgccgcggccgaggcgc 4017680
>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0618D11 Length = 150103 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ggccggcgtcggcgtcggct 391 |||||||||||||||||||| Sbjct: 62284 ggccggcgtcggcgtcggct 62265
>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0407A09 Length = 103788 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggccggcgtcggcgtcggct 391 |||||||||||||||||||| Sbjct: 82716 ggccggcgtcggcgtcggct 82735
>emb|X63134.1|ZMHRGP Z.mays HRGP gene Length = 1954 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gtggccggcgtcggcgtcgg 389 |||||||||||||||||||| Sbjct: 631 gtggccggcgtcggcgtcgg 612
>emb|AJ131535.1|ZMA131535 Zea mays HRGP gene, AC1503 line Length = 3735 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gtggccggcgtcggcgtcgg 389 |||||||||||||||||||| Sbjct: 2313 gtggccggcgtcggcgtcgg 2294
>gb|AY103616.1| Zea mays PCO091178 mRNA sequence Length = 1634 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gtggccggcgtcggcgtcgg 389 |||||||||||||||||||| Sbjct: 190 gtggccggcgtcggcgtcgg 171
>gb|U51561.1|U51561 Homo sapiens cosmid clone N79E2 from 22q12, complete sequence Length = 39683 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctgcgccatcctcgcctcca 100 |||||||||||||||||||| Sbjct: 23379 ctgcgccatcctcgcctcca 23398
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 cgacaagtacgccctcgcctgcgccatc 90 |||||| ||||||||||||||| ||||| Sbjct: 8103 cgacaactacgccctcgcctgctccatc 8130
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 360 cggccgcttcgtggccggcgtcggcgtcggct 391 |||||||| ||| || |||||||||||||||| Sbjct: 4221225 cggccgctgcgtcgctggcgtcggcgtcggct 4221256
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 360 cggccgcttcgtggccggcgtcggcgtcggct 391 |||||||| ||| || |||||||||||||||| Sbjct: 62545 cggccgctgcgtcgctggcgtcggcgtcggct 62514
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atcctcgccggcatcatcaa 215 |||||||||||||||||||| Sbjct: 95947 atcctcgccggcatcatcaa 95928 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atcctcgccggcatcatcaa 215 |||||||||||||||||||| Sbjct: 88441 atcctcgccggcatcatcaa 88422
>dbj|AP006086.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20G22, TM0150, complete sequence Length = 93469 Score = 40.1 bits (20), Expect = 5.6 Identities = 119/152 (78%) Strand = Plus / Plus Query: 256 tccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgcgggc 315 |||||||||||||| || || ||||| || |||||||| | |||||||||| | ||| Sbjct: 49944 tccgactggatcggacgccgttacacaatcgtcctcgctggaggcatcttcttcaccggc 50003 Query: 316 gcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggcc 375 || ||| ||||||| || |||| | |||| | |||| ||| ||| |||||| | ||| Sbjct: 50004 gccctcctcatgggattctcccccaactactctttcctaatgttcgcacgcttcatagcc 50063 Query: 376 ggcgtcggcgtcggctacgcgcttatgatcgc 407 ||| ||||| | |||||||| || |||||||| Sbjct: 50064 ggcatcggcattggctacgccctcatgatcgc 50095
>dbj|AP004984.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44N06, TM0438, complete sequence Length = 107764 Score = 40.1 bits (20), Expect = 5.6 Identities = 119/152 (78%) Strand = Plus / Plus Query: 256 tccgactggatcggccggcggtacaccatggtcctcgcgtcggtcatcttcttcgcgggc 315 |||||||||||||| || || ||||| || |||||||| | |||||||||| | ||| Sbjct: 86284 tccgactggatcggacgccgttacacaatcgtcctcgctggaggcatcttcttcaccggc 86343 Query: 316 gcgctcatcatgggcctcgccccgagctacgcggtcctcatgctcggccgcttcgtggcc 375 || ||| ||||||| || |||| | |||| | |||| ||| ||| |||||| | ||| Sbjct: 86344 gccctcctcatgggattctcccccaactactctttcctaatgttcgcacgcttcatagcc 86403 Query: 376 ggcgtcggcgtcggctacgcgcttatgatcgc 407 ||| ||||| | |||||||| || |||||||| Sbjct: 86404 ggcatcggcattggctacgccctcatgatcgc 86435
>gb|L22036.1|PSEPILHIJ Pseudomonas aeruginosa pilH pilI pilJ genes, complete cds Length = 3224 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgccgccgaggcgccggcga 49 |||||||||||||||||||| Sbjct: 2399 cgccgccgaggcgccggcga 2380 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,364,141 Number of Sequences: 3902068 Number of extensions: 2364141 Number of successful extensions: 79164 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 77059 Number of HSP's gapped (non-prelim): 2097 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
