>RAD9A_HUMAN (Q99638) Cell cycle checkpoint control protein RAD9A (EC 3.1.11.2)|
           (DNA repair exonuclease rad9 homolog A) (hRAD9)
          Length = 391

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = -1

Query: 273 PDRPDKTGPWSQKE-----RTCPASDPRNK*NNVKSSGISLAPVRAPTYPTPL 130
           P  P   GP S++E      T P + P  K  ++    I LAPVR+P  P+P+
Sbjct: 331 PQPPKSPGPHSEEEDEAEPSTVPGTPPPKKFRSLFFGSI-LAPVRSPQGPSPV 382

>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -1

Query: 222 PASDPRNK*NNVKSSGISLAPVRAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAV 43
           P+  P ++ +  KSS ISL  V AP  P+           S  T  S P  +  P P   
Sbjct: 197 PSVRPAHRSHQRKSSNISLPSVSAPPLPS----------ASLPTHVSNPPQAPPPPPTPT 246

Query: 42  VSLDSR 25
           + LDS+
Sbjct: 247 IGLDSK 252

>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 19  SLSTIQRNHSQGNGLGGISGERRPC 93
           +L T+ R H  G G+G + GE + C
Sbjct: 293 TLETVTRQHPTGKGIGALQGEMKLC 317

>SYD_THEAC (Q9HJM1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 428

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -1

Query: 129 KSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR 4
           KS  K G+E S T  S   ++  P+PL VV  D  Q   E+R
Sbjct: 77  KSISKAGIEISGTSISIVNEAEAPLPLPVV--DPVQADLETR 116

>HIS1_THET8 (Q5SM15) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 206

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 211 VGSGACPLLLAPRPGFIGPIR 273
           +G GAC L L  RPG  GPIR
Sbjct: 89  LGFGACRLSLIRRPGDTGPIR 109

>HIS1_THET2 (P62381) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 206

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 211 VGSGACPLLLAPRPGFIGPIR 273
           +G GAC L L  RPG  GPIR
Sbjct: 89  LGFGACRLSLIRRPGDTGPIR 109

>HBA1_PLEWA (P06639) Hemoglobin alpha-1 subunit (Hemoglobin alpha-1 chain)|
           (Alpha-1-globin) (Hemoglobin alpha-major chain)
          Length = 141

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 9   IPTVPVYYPAKPQPRERAWRNQRGKKTLLSLT 104
           +PT  +Y+PAK      ++ +  GKK + +LT
Sbjct: 36  MPTTRIYFPAKDLSERSSYLHSHGKKVVGALT 67

>DNAJH_SYNY3 (P50027) DnAJ-like protein slr0093|
          Length = 332

 Score = 24.6 bits (52), Expect(2) = 8.0
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = +2

Query: 122 NDLRGVG*VGALTGASEIPLLLTLFYLFRGSE 217
           ND  G G   A  G  E  L LTL   FRG E
Sbjct: 141 NDFGGFGNAQAPAGDREATLQLTLAEAFRGVE 172



 Score = 21.6 bits (44), Expect(2) = 8.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 213 RKRGMSSPFGSKARFY 260
           R +GM+SP+G +   Y
Sbjct: 199 RGKGMASPYGQRGDLY 214


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,543,614
Number of Sequences: 219361
Number of extensions: 788223
Number of successful extensions: 2234
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2233
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)