ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet29a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein 246 5e-62
2emb|AJ234401.1|HVU234401 Hordeum vulgare partial mRNA; clone cMW... 125 1e-25
3gb|AF026211.2| Caenorhabditis elegans cosmid T13B5, complete seq... 52 0.002
4gb|AF063008.1| Caenorhabditis elegans cosmid F25F1, complete seq... 52 0.002
5ref|NM_061512.1| Caenorhabditis elegans COLlagen family member (... 52 0.002
6emb|Y17332.1|ZMPROPR Zea mays mRNA for proline-rich protein 50 0.006
7emb|AJ130830.1|ZMA130830 Zea mays gene encoding putative cell wa... 50 0.006
8gb|AF067947.2| Caenorhabditis elegans cosmid T10B5, complete seq... 48 0.025
9ref|NM_008891.1| Mus musculus pinin (Pnn), mRNA 46 0.097
10gb|AF016678.1| Caenorhabditis elegans cosmid K07E8, complete seq... 46 0.097
11gb|AF519479.1| Streptococcus equi subsp. zooepidemicus Szp prote... 46 0.097
12dbj|AK161109.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 46 0.097
13dbj|AK157587.1| Mus musculus activated spleen cDNA, RIKEN full-l... 46 0.097
14dbj|AK160616.1| Mus musculus 11 days embryo whole body cDNA, RIK... 46 0.097
15dbj|AK050669.1| Mus musculus 2 days neonate thymus thymic cells ... 46 0.097
16dbj|AK030978.1| Mus musculus adult male thymus cDNA, RIKEN full-... 46 0.097
17gb|AY129403.1| Mus musculus pinin gene, complete cds 46 0.097
18dbj|AK198012.1| Mus musculus cDNA, clone:Y1G0126N13, strand:minu... 46 0.097
19gb|AC132607.4| Mus musculus BAC clone RP23-447F22 from 12, compl... 46 0.097
20gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosom... 46 0.097
21emb|Y08701.1|MMPININ M.musculus mRNA for Pinin protein 46 0.097
22gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, complete s... 44 0.39
23emb|Z81147.1|CET09E11 Caenorhabditis elegans Cosmid T09E11, comp... 44 0.39
24gb|AF519487.1| Streptococcus equi subsp. zooepidemicus Szp prote... 44 0.39
25gb|AF519478.1| Streptococcus equi subsp. zooepidemicus Szp prote... 44 0.39
26gb|AF519473.1| Streptococcus equi subsp. zooepidemicus Szp prote... 44 0.39
27gb|BC103403.1| Bos taurus pinin, desmosome associated protein, m... 44 0.39
28gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, co... 44 0.39
29gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.39
30gb|AF331853.1| Saccharum hybrid cultivar CP72-2086 proline-rich ... 44 0.39
31gb|AF331852.1| Saccharum hybrid cultivar CP72-2086 proline-rich ... 44 0.39
32gb|AF331851.1| Saccharum hybrid cultivar CP65-357 proline-rich p... 44 0.39
33gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, com... 44 0.39
34ref|NM_174718.1| Bos taurus pinin, desmosome associated protein ... 44 0.39
35emb|AL132943.3|CEY116F11B Caenorhabditis elegans YAC Y116F11B, c... 44 0.39
36emb|AL032623.1|CEY43F8B Caenorhabditis elegans YAC Y43F8B, compl... 44 0.39
37gb|U77717.1|BTU77717 Bos taurus desmosome associated protein pin... 44 0.39
38gb|AY623109.1| Homo sapiens TAF1 RNA polymerase II, TATA box bin... 42 1.5
39emb|Z81502.1|CEF14B6 Caenorhabditis elegans Cosmid F14B6, comple... 42 1.5
40ref|XM_764013.1| Giardia lamblia ATCC 50803 hypothetical protein... 42 1.5
41gb|AF040648.2| Caenorhabditis elegans fosmid H19M22, complete se... 42 1.5
42gb|AF025452.3| Caenorhabditis elegans cosmid B0454, complete seq... 42 1.5
43gb|BC098513.1| Rattus norvegicus cDNA clone IMAGE:7124518, **** ... 42 1.5
44gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete s... 42 1.5
45dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.5
46gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ... 42 1.5
47ref|XM_347237.2| PREDICTED: Rattus norvegicus similar to pinin (... 42 1.5
48gb|AF098994.1| Caenorhabditis elegans cosmid T06A4, complete seq... 42 1.5
49emb|Y08772.1|HSPABII Homo sapiens PABII pseudogene 42 1.5
50emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6... 42 1.5
51gb|AF022969.1| Caenorhabditis elegans cosmid C29G2, complete seq... 40 6.0
52gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.0
53gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 6.0
54gb|AE017130.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 6.0
55gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.0
56gb|AF045637.2| Caenorhabditis elegans cosmid C44C11, complete se... 40 6.0
57ref|XM_359498.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 6.0
58ref|NM_002687.2| Homo sapiens pinin, desmosome associated protei... 40 6.0
59gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
60gb|AY659008.1| Synthetic construct Peudomonas aeruginosa clone F... 40 6.0
61gb|AE002104.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 6.0
62gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.0
63gb|AE009952.1| Yersinia pestis KIM, complete genome 40 6.0
64gb|AF043706.4| Caenorhabditis elegans cosmid ZC123, complete seq... 40 6.0
65ref|XM_843078.1| Leishmania major strain Friedlin hypothetical p... 40 6.0
66emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, compl... 40 6.0
67emb|AL110501.1|CEY79H2A Caenorhabditis elegans YAC Y79H2A, compl... 40 6.0
68gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, com... 40 6.0
69gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, co... 40 6.0
70emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 i... 40 6.0
71emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on ch... 40 6.0
72emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in... 40 6.0
73emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 6.0
74emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.0
75emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 6.0
76emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 6.0
77emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; seg... 40 6.0
78emb|CR615582.1| full-length cDNA clone CS0DA003YN20 of Neuroblas... 40 6.0
79gb|AF003148.2| Caenorhabditis elegans cosmid F32B5, complete seq... 40 6.0
80emb|CR622090.1| full-length cDNA clone CS0DF038YF23 of Fetal bra... 40 6.0
81gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 6.0
82ref|XM_686048.1| PREDICTED: Danio rerio similar to junctophilin ... 40 6.0
83ref|XM_703822.1| PREDICTED: Danio rerio similar to junctophilin ... 40 6.0
84ref|XM_682740.1| PREDICTED: Danio rerio similar to junctophilin ... 40 6.0
85ref|XM_678616.1| PREDICTED: Danio rerio similar to titin isoform... 40 6.0
86gb|AC087794.1| Caenorhabditis elegans cosmid Y32G9A, complete se... 40 6.0
87gb|AY224438.1| Oryza sativa (japonica cultivar-group) isolate 23... 40 6.0
88gb|AC006620.1|AC006620 Caenorhabditis elegans cosmid C51G7, comp... 40 6.0
89gb|AF130351.2|AF130351 Homo sapiens chromosome 21 clone PAC 190N... 40 6.0
90dbj|AK028219.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 6.0
91gb|BC091782.1| Danio rerio JPH2 protein, mRNA (cDNA clone IMAGE:... 40 6.0
92gb|AF040652.2| Caenorhabditis elegans cosmid T05A8, complete seq... 40 6.0
93gb|AF016669.1| Caenorhabditis elegans cosmid K10G6, complete seq... 40 6.0
94emb|CR377872.1| Pinus pinaster SSR, clone PPB3A06r 40 6.0
95emb|CR377871.1| Pinus pinaster SSR, clone PPB3A06 40 6.0
96dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
97gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, r... 40 6.0
98gb|AC007947.5|AC007947 Drosophila melanogaster, chromosome 3R, r... 40 6.0
99gb|AC154309.1| Mus musculus BAC clone RP23-370I7 from chromosome... 40 6.0
100dbj|AK223612.1| Homo sapiens mRNA for pinin, desmosome associate... 40 6.0
101gb|AF195139.1|AF195139 Homo sapiens pinin (PNN) gene, complete cds 40 6.0
102gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 o... 40 6.0
103emb|BX248228.3| Zebrafish DNA sequence from clone RP71-40J23 in ... 40 6.0
104emb|AL954299.13| Mouse DNA sequence from clone RP23-399D3 on chr... 40 6.0
105dbj|BS000011.1| Pan troglodytes chromosome 22 clone:RP43-017I17,... 40 6.0
106emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein 40 6.0
107dbj|AK100217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
108gb|AF112222.1|AF112222 Homo sapiens nuclear protein SDK3 mRNA, c... 40 6.0
109emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007 40 6.0
110gb|BC062602.1| Homo sapiens pinin, desmosome associated protein,... 40 6.0
111emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, com... 40 6.0
112gb|AF098988.4| Caenorhabditis elegans cosmid C50E10, complete se... 40 6.0
113gb|AF337054.1| Oryza sativa repetitive proline rich protein mRNA... 40 6.0
114emb|AL732421.9| Zebrafish DNA sequence from clone BUSM1-249N21 i... 40 6.0
115gb|AY109604.1| Zea mays CL1298_1 mRNA sequence 40 6.0
116gb|AY109530.1| Zea mays CL1228_1 mRNA sequence 40 6.0
117emb|AL032637.1|CEY43F8C Caenorhabditis elegans YAC Y43F8C, compl... 40 6.0
118emb|Z46996.1|CEC34C12 Caenorhabditis elegans Cosmid C34C12, comp... 40 6.0
119emb|AL139020.5|CNS01DX2 Human chromosome 14 DNA sequence BAC R-1... 40 6.0
120gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 10... 40 6.0
121emb|AL132639.4|CNS01DT4 Human chromosome 14 DNA sequence BAC R-4... 40 6.0
122gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.0
123gb|AC024796.1| Caenorhabditis elegans cosmid Y48G1C, complete se... 40 6.0
124gb|U77718.1|HSU77718 Human desmosome associated protein pinin mR... 40 6.0
125emb|X82241.1|HSTCL1SP1 H.sapiens TCL1 gene 40 6.0
126emb|Y10351.1|HSSDK3 H.sapiens mRNA for nuclear protein SDK3, par... 40 6.0
127emb|Y09703.1|HSMEMA H.sapiens mRNA for MEMA protein 40 6.0

>emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein
          Length = 1487

 Score =  246 bits (124), Expect = 5e-62
 Identities = 178/195 (91%), Gaps = 7/195 (3%)
 Strand = Plus / Plus

                                                                       
Query: 71  gcggtgaagcacaa-gtgcagcaacagctgcgagaa------agcagcaatggcgaggca 123
           |||||||||||||| ||||||||| |||||||||||      ||||||||||||||||||
Sbjct: 47  gcggtgaagcacaaagtgcagcaagagctgcgagaaggagcgagcagcaatggcgaggca 106

                                                                       
Query: 124 cagcctccttgccgtgctcctcgtcgggctgctcgcggcctccggcttcagcctcgcggc 183
           ||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||
Sbjct: 107 cagcctccttgccgtgctcctcgtcgggctggtcgcggcctccggcttcagccaggcggc 166

                                                                       
Query: 184 cgctgctggccggggcctcgtcgagaagctccccgagccggagcccaagcccacgccgta 243
           ||| |||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||
Sbjct: 167 cgccgctggccggggccttgctgagaagctccccgagccggagcccaagccgacgccgta 226

                          
Query: 244 cccggagcccaagcc 258
           ||| |||||||||||
Sbjct: 227 cccagagcccaagcc 241



 Score =  125 bits (63), Expect = 1e-25
 Identities = 150/179 (83%)
 Strand = Plus / Plus

                                                                       
Query: 255 agcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcctaagcctg 314
           |||| |||||||| |||||||||||||| ||||| ||||| |  ||| ||||||| ||||
Sbjct: 256 agccaatgcctaagcctgaacccatgccaaagccagagcctaagcctctgcctaaacctg 315

                                                                       
Query: 315 aacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccag 374
           ||||||||||||| || ||||| || ||| |||| || ||||||||||||||||||||||
Sbjct: 316 aacccatgccaaaaccagagcctaagcctctgcccaaacctgaacccatgccaaagccag 375

                                                                      
Query: 375 agcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccc 433
           |||| || || || |  ||||| |||||||| || || || ||||| || |||||||||
Sbjct: 376 agcccaaaccggagccgaagccggagccgatcccaaagcccgaaccaaagcctgagccc 434



 Score =  107 bits (54), Expect = 3e-20
 Identities = 153/186 (82%)
 Strand = Plus / Plus

                                                                       
Query: 248 gagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcct 307
           ||||| |||||| |||||||||||||||||||||| || || ||||| |  ||| |||| 
Sbjct: 291 gagcctaagcctctgcctaaacctgaacccatgccaaaaccagagcctaagcctctgccc 350

                                                                       
Query: 308 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 367
           || |||||||||||||||||||| |||||||||||   ||| ||||| || || || |||
Sbjct: 351 aaacctgaacccatgccaaagccagagcccaaaccggagccgaagccggagccgatccca 410

                                                                       
Query: 368 aagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacct 427
           ||||| || || ||||| || | |||||| || |||||||| ||||| || || || |||
Sbjct: 411 aagcccgaaccaaagcctgagcccaagcctgacccgatgcccaaacctgagcctaagcct 470

                 
Query: 428 gagccc 433
           ||||||
Sbjct: 471 gagccc 476



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 162/200 (81%)
 Strand = Plus / Plus

                                                                       
Query: 248 gagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcct 307
           ||||| |||||| |||| ||||||||||||||||| ||||| ||||||| |||   ||| 
Sbjct: 333 gagcctaagcctctgcccaaacctgaacccatgccaaagccagagcccaaaccggagccg 392

                                                                       
Query: 308 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 367
           ||||| || || || |||||||| || || || |||  ||| |||||||| || ||||| 
Sbjct: 393 aagccggagccgatcccaaagcccgaaccaaagcctgagcccaagcctgacccgatgccc 452

                                                                       
Query: 368 aagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacct 427
           || || ||||||||||| || | |||||| ||||||||||| ||||| ||||| || || 
Sbjct: 453 aaacctgagcctaagcctgagcccaagccagagccgatgcccaaaccggaaccaaagcca 512

                               
Query: 428 gagccccaacctgagcctat 447
           |||||| | || ||||||||
Sbjct: 513 gagcccaagcccgagcctat 532



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 106/126 (84%)
 Strand = Plus / Plus

                                                                       
Query: 308 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 367
           |||||||| || |||||||| ||||| ||||| |||  ||| |||||||| || ||||||
Sbjct: 729 aagcctgagccgatgccaaaaccggaacccaagcctgagcccaagcctgagccgatgcca 788

                                                                       
Query: 368 aagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacct 427
           || || ||||| ||||| || | |||||||||||||||||| ||||| ||||| || |||
Sbjct: 789 aaaccggagcccaagcccgagcccaagcccgagccgatgccaaaaccggaaccaaagcct 848

                 
Query: 428 gagccc 433
           ||||||
Sbjct: 849 gagccc 854



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                       
Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421
           |||||||| || || || |||||||| | |||||||||||||||||||||||||||||| 
Sbjct: 594 atgccaaaacccgaaccgaagccagagcccaagcccgagccgatgcctaaaccagaacca 653

                                  
Query: 422 aaacctgagccccaacctgagcc 444
           || || |||||| |||| |||||
Sbjct: 654 aagccagagcccaaacccgagcc 676



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Plus

                                                                        
Query: 323  ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382
            |||||||| |||||||||||   ||| ||||| || || ||||||||||| || || |||
Sbjct: 966  ccaaagccagagcccaaacccgagcccaagccagagccgatgccaaagccggaaccaaag 1025

                                                                        
Query: 383  ccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccccaacctgag 442
            || || | |||||||||||| ||||| || ||||||||||| || |||||| | ||||||
Sbjct: 1026 cccgagcccaagcccgagccaatgccgaagccagaaccgaagccagagcccaagcctgag 1085

              
Query: 443  cc 444
            ||
Sbjct: 1086 cc 1087



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 159/200 (79%)
 Strand = Plus / Plus

                                                                       
Query: 245 ccggagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatg 304
           ||||| |||||||||  ||| || ||||| || ||||| || ||||||||||  ||   |
Sbjct: 750 ccggaacccaagcctgagcccaagcctgagccgatgccaaaaccggagcccaagcccgag 809

                                                                       
Query: 305 cctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatg 364
           || ||||| || || |||||||| ||||| || || |||  ||| |||||| | || |||
Sbjct: 810 cccaagcccgagccgatgccaaaaccggaaccaaagcctgagcccaagccttacccaatg 869

                                                                       
Query: 365 ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424
           || || || ||||||||||| || | ||| |||||||||||||| ||||||||||| || 
Sbjct: 870 cccaaacctgagcctaagcctgagcccaaacccgagccgatgcccaaaccagaaccaaag 929

                               
Query: 425 cctgagccccaacctgagcc 444
           || |||||| |||| |||||
Sbjct: 930 ccagagcccaaacccgagcc 949



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 377 cctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccccaa 436
           ||||||||||| | |||||| ||||||||||| ||||| ||||| || ||||||||| | 
Sbjct: 714 cctaagccagagcccaagcctgagccgatgccaaaaccggaacccaagcctgagcccaag 773

                   
Query: 437 cctgagcc 444
           ||||||||
Sbjct: 774 cctgagcc 781



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 346  gcctaagcctgaacccatgccaaagccagagcctaagcc 384
            ||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 1133 gcctaagcctgaacctatgcctaagccagagcccaagcc 1171



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 350  aagcctgaacccatgccaaagccagagcctaagcc 384
            |||||||| || |||||||||||||||||||||||
Sbjct: 1077 aagcctgagccgatgccaaagccagagcctaagcc 1111



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                        
Query: 320  atgccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcct 379
            |||||||||||||| || || ||   ||| ||||| || || ||||| |||||||| || 
Sbjct: 1005 atgccaaagccggaaccaaagcccgagcccaagcccgagccaatgccgaagccagaaccg 1064

                                                  
Query: 380  aagccagaactcaagcccgagccgatgcctaaaccaga 417
            |||||||| | |||||| ||||||||||| || |||||
Sbjct: 1065 aagccagagcccaagcctgagccgatgccaaagccaga 1102



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 380 aagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccccaacct 439
           |||||||| | |||||||||||| ||||| ||||| ||||| || || |||||| |||| 
Sbjct: 507 aagccagagcccaagcccgagcctatgccaaaacctgaaccaaagcccgagcccaaaccc 566

                
Query: 440 gagcc 444
           |||||
Sbjct: 567 gagcc 571



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 304  gcctaagcctgaacccatgccaaagccggagcccaa 339
            ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1133 gcctaagcctgaacctatgcctaagccagagcccaa 1168



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                       
Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421
           ||||| || ||||| || |||||||| | ||| |||||||||||||| || || ||||| 
Sbjct: 909 atgcccaaaccagaaccaaagccagagcccaaacccgagccgatgccaaagccggaacca 968

                                  
Query: 422 aaacctgagccccaacctgagcc 444
           || || |||||| |||| |||||
Sbjct: 969 aagccagagcccaaacccgagcc 991



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 249 agcccaagcctatgcctaaacctgaacc 276
           ||||| |||||||||| |||||||||||
Sbjct: 520 agcccgagcctatgccaaaacctgaacc 547



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>emb|AJ234401.1|HVU234401 Hordeum vulgare partial mRNA; clone cMWG0646
          Length = 694

 Score =  125 bits (63), Expect = 1e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                       
Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421
           ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 113 atgccaaagcccgagcctaagccagaacccaagcccgagccgatgcctaaaccagaaccg 172

                      
Query: 422 aaacctgagcc 432
           |||||||||||
Sbjct: 173 aaacctgagcc 183



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                       
Query: 346 gcctaagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgat 405
           ||||||||| ||||||| |||  ||||   |||||| |||||||  || || ||||| ||
Sbjct: 127 gcctaagccagaacccaagcccgagccgatgcctaaaccagaaccgaaacctgagcctat 186

                                                  
Query: 406 gcctaaaccagaaccgaaacctgagccccaacctgagcc 444
           |||||||||||||||||||||||||||| ||||||||||
Sbjct: 187 gcctaaaccagaaccgaaacctgagcccaaacctgagcc 225



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                       
Query: 346 gcctaagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgat 405
           ||||||||| || || |||||||| || || || |||||||| | |||||||||||||||
Sbjct: 315 gcctaagcccgagccgatgccaaaacccgaaccaaagccagagcccaagcccgagccgat 374

                                       
Query: 406 gcctaaaccagaaccgaaacctgagccc 433
           ||| ||||| |||||||| |||||||||
Sbjct: 375 gccgaaacccgaaccgaagcctgagccc 402



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 398 gagccgatgcctaaaccagaaccgaaacctgagccccaacctgagcc 444
           ||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3   gagcctatgcctaaaccagaaccgaaacctgagcccaaacctgagcc 49



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 350 aagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgatgcct 409
           |||||| | |||||||| || || ||||||||||| || | ||| || ||||||||||| 
Sbjct: 403 aagccttaccccatgcccaaacctgagcctaagcctgagcccaaaccagagccgatgcca 462

                                              
Query: 410 aaaccagaaccgaaacctgagccccaacctgagcc 444
           ||||| ||||| || || |||||| |||| |||||
Sbjct: 463 aaacccgaaccaaagccagagcccaaaccagagcc 497



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 346 gcctaagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgat 405
           |||| ||||| |||| |||||||| || || || |||||||| | |||||||||||||| 
Sbjct: 546 gcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccgag 605

                    
Query: 406 gcctaaacc 414
           ||| |||||
Sbjct: 606 gccaaaacc 614



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421
           |||||||| || || || |||||||| |  ||||||||||||||||| ||||| ||||| 
Sbjct: 289 atgccaaaacccgaaccaaagccagagcctaagcccgagccgatgccaaaacccgaacca 348

                       
Query: 422 aaacctgagccc 433
           || || ||||||
Sbjct: 349 aagccagagccc 360



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                       
Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421
           |||||||| || || || |||||||| | ||| || ||||||||||| ||||| ||||| 
Sbjct: 457 atgccaaaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaacca 516

                                  
Query: 422 aaacctgagccccaacctgagcc 444
           || || |||||| |||| |||||
Sbjct: 517 aagccagagcccaaacccgagcc 539



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 391 caagcccgagccgatgcctaaaccagaacc 420
           |||||||||||||||||| ||||| |||||
Sbjct: 276 caagcccgagccgatgccaaaacccgaacc 305



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>gb|AF026211.2| Caenorhabditis elegans cosmid T13B5, complete sequence
          Length = 31469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 333   agcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382
             |||| ||||||| |||||||||||| || |||||||||||| || |||||
Sbjct: 12945 agcctaaacctaggcctaagcctgagcctatgccaaagccaaaggctaag 12994



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 298   acctatgcctaagcctgaacccatgccaaagcc 330
             ||||| |||||||||||| || |||||||||||
Sbjct: 12952 acctaggcctaagcctgagcctatgccaaagcc 12984



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>gb|AF063008.1| Caenorhabditis elegans cosmid F25F1, complete sequence
          Length = 16325

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 299  cctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaa 358
            |||| ||| |||||||| || | ||||||||| ||||  || |||| |||||||||| | 
Sbjct: 2084 cctaagccaaagcctgagcctaagccaaagcctgagcttaagcctaagcctaagcctaag 2025

                                                  
Query: 359  cccatgccaaagccagagcctaagccagaactcaagcc 396
            || | ||| ||||| |||||||||||  ||||||||||
Sbjct: 2024 ccgaagcctaagcctgagcctaagcctaaactcaagcc 1987



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>ref|NM_061512.1| Caenorhabditis elegans COLlagen family member (col-40) (col-40) mRNA,
            complete cds
          Length = 1251

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 333  agcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382
            |||| ||||||| |||||||||||| || |||||||||||| || |||||
Sbjct: 1078 agcctaaacctaggcctaagcctgagcctatgccaaagccaaaggctaag 1029



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 298  acctatgcctaagcctgaacccatgccaaagcc 330
            ||||| |||||||||||| || |||||||||||
Sbjct: 1071 acctaggcctaagcctgagcctatgccaaagcc 1039



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>emb|Y17332.1|ZMPROPR Zea mays mRNA for proline-rich protein
          Length = 1471

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 365 ccaaagccagagcctaagccagaac 389
           |||||||||||||||||||||||||
Sbjct: 886 ccaaagccagagcctaagccagaac 910



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 364 gccaaagccagagcctaagccagaac 389
           ||||||||||||||||||||| ||||
Sbjct: 921 gccaaagccagagcctaagcccgaac 946



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 364 gccaaagccagagcctaagccagaac 389
           ||||||||||||||||||||| ||||
Sbjct: 753 gccaaagccagagcctaagcccgaac 778



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 406  gcctaaaccagaaccgaaacctgagccccaacc 438
            ||||||||| ||||| ||||| |||||||||||
Sbjct: 1089 gcctaaacccgaaccaaaaccagagccccaacc 1121



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  ccaaagccagagcctaagcc 384
            ||||||||||||||||||||
Sbjct: 1054 ccaaagccagagcctaagcc 1073



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>emb|AJ130830.1|ZMA130830 Zea mays gene encoding putative cell wall protein
          Length = 1792

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 365 ccaaagccagagcctaagccagaac 389
           |||||||||||||||||||||||||
Sbjct: 866 ccaaagccagagcctaagccagaac 890



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 364 gccaaagccagagcctaagccagaac 389
           ||||||||||||||||||||| ||||
Sbjct: 901 gccaaagccagagcctaagcccgaac 926



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 364 gccaaagccagagcctaagccagaac 389
           ||||||||||||||||||||| ||||
Sbjct: 733 gccaaagccagagcctaagcccgaac 758



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 406  gcctaaaccagaaccgaaacctgagccccaacc 438
            ||||||||| ||||| ||||| |||||||||||
Sbjct: 1069 gcctaaacccgaaccaaaaccagagccccaacc 1101



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  ccaaagccagagcctaagcc 384
            ||||||||||||||||||||
Sbjct: 1034 ccaaagccagagcctaagcc 1053



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>gb|AF067947.2| Caenorhabditis elegans cosmid T10B5, complete sequence
          Length = 40837

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 322   gccaaagccggagcccaaacctatgcctaagcctga 357
             |||||||||| |||| || |||||||||||||||||
Sbjct: 21570 gccaaagccgaagccgaagcctatgcctaagcctga 21535



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>ref|NM_008891.1| Mus musculus pinin (Pnn), mRNA
          Length = 2813

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 1418 aacctgagccccaacctgagcct 1440



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>gb|AF016678.1| Caenorhabditis elegans cosmid K07E8, complete sequence
          Length = 36763

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 323   ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382
             |||||||| ||||| ||| ||| || ||||||| | || |||||||||||| | ||||||
Sbjct: 13609 ccaaagcctgagccaaaatctaagcgtaagcctaagcctatgccaaagccaaaacctaag 13550

                
Query: 383   cca 385
             |||
Sbjct: 13549 cca 13547



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>gb|AF519479.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete
           cds
          Length = 1183

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 406 gcctaaaccagaaccgaaacctgagccccaacctgagcc 444
           |||||| |||||||| |||||||||||  ||||||||||
Sbjct: 838 gcctaagccagaaccaaaacctgagccaaaacctgagcc 876



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 407 cctaaaccagaaccgaaacctgagcc 432
           |||||||||||||| |||||||||||
Sbjct: 887 cctaaaccagaaccaaaacctgagcc 912



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>dbj|AK161109.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732437N05 product:pinin, full insert
            sequence
          Length = 2451

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 1428 aacctgagccccaacctgagcct 1450



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>dbj|AK157587.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830225B07 product:pinin, full insert
            sequence
          Length = 2589

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 1431 aacctgagccccaacctgagcct 1453



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>dbj|AK160616.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2700028H03 product:pinin, full
            insert sequence
          Length = 2441

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 1422 aacctgagccccaacctgagcct 1444



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>dbj|AK050669.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:C920030P20
            product:pinin, full insert sequence
          Length = 2358

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 1433 aacctgagccccaacctgagcct 1455



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>dbj|AK030978.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830474F19 product:pinin, full insert
            sequence
          Length = 3286

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 1416 aacctgagccccaacctgagcct 1438



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>gb|AY129403.1| Mus musculus pinin gene, complete cds
          Length = 7080

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 5117 aacctgagccccaacctgagcct 5139



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>dbj|AK198012.1| Mus musculus cDNA, clone:Y1G0126N13, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000021381, based on BLAT search
          Length = 397

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 423 aacctgagccccaacctgagcct 445
           |||||||||||||||||||||||
Sbjct: 193 aacctgagccccaacctgagcct 215



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>gb|AC132607.4| Mus musculus BAC clone RP23-447F22 from 12, complete sequence
          Length = 194101

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 423   aacctgagccccaacctgagcct 445
             |||||||||||||||||||||||
Sbjct: 69280 aacctgagccccaacctgagcct 69302



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>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete
             sequence
          Length = 193547

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 423   aacctgagccccaacctgagcct 445
             |||||||||||||||||||||||
Sbjct: 10276 aacctgagccccaacctgagcct 10254



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>emb|Y08701.1|MMPININ M.musculus mRNA for Pinin protein
          Length = 2813

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 423  aacctgagccccaacctgagcct 445
            |||||||||||||||||||||||
Sbjct: 1418 aacctgagccccaacctgagcct 1440



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>gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, complete sequence
          Length = 107705

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 298   acctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355
             ||||| |||||||||||| || ||||| |||||  |||| || |||| ||||||||||
Sbjct: 92057 acctaagcctaagcctgagcctatgcctaagcctaagcctaagcctaagcctaagcct 92000



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 340   acctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384
             ||||| |||||||||||| || ||||| |||||  ||||||||||
Sbjct: 92057 acctaagcctaagcctgagcctatgcctaagcctaagcctaagcc 92013



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>emb|Z81147.1|CET09E11 Caenorhabditis elegans Cosmid T09E11, complete sequence
          Length = 33746

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 304  gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagc 353
            ||||||||||||||| | ||| ||||  ||||| ||||||| ||||||||
Sbjct: 4566 gcctaagcctgaacctaagcctaagcttgagccaaaacctaggcctaagc 4517



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>gb|AF519487.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete
           cds
          Length = 1099

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 364 gccaaagccagagcctaagccagaac 389
           |||||| |||||||||||||||||||
Sbjct: 814 gccaaaaccagagcctaagccagaac 839



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>gb|AF519478.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete
           cds
          Length = 1114

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 368 aagccagagcctaagccagaac 389
           ||||||||||||||||||||||
Sbjct: 857 aagccagagcctaagccagaac 878



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>gb|AF519473.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete
           cds
          Length = 1108

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 365 ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424
           ||||| ||||| |||||||||||||  || || ||||| | |||||| |||||||| |||
Sbjct: 818 ccaaaaccagaacctaagccagaaccaaaacctgagcctaagcctaagccagaaccaaaa 877

             
Query: 425 cc 426
           ||
Sbjct: 878 cc 879



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>gb|BC103403.1| Bos taurus pinin, desmosome associated protein, mRNA (cDNA clone
            MGC:127754 IMAGE:30957312), complete cds
          Length = 2388

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  ctgagccccaacctgagcctat 447
            ||||||||||||||||||||||
Sbjct: 1457 ctgagccccaacctgagcctat 1478



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>gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, complete sequence
          Length = 194546

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 323   ccaaagccggagcccaaaccta 344
             ||||||||||||||||||||||
Sbjct: 95266 ccaaagccggagcccaaaccta 95245



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 178     cgcggccgctgctggccggggc 199
               ||||||||||||||||||||||
Sbjct: 2703001 cgcggccgctgctggccggggc 2702980



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>gb|AF331853.1| Saccharum hybrid cultivar CP72-2086 proline-rich protein mRNA,
           partial sequence
          Length = 1173

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 407 cctaaaccagaaccgaaacctgagcc 432
           |||||||||||||| |||||||||||
Sbjct: 149 cctaaaccagaaccaaaacctgagcc 174



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 365 ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424
           ||||| |||||||||||||| || | |||||| || || |  ||| |||||   ||||||
Sbjct: 197 ccaaaaccagagcctaagcctgagcccaagccagaaccaaaacctgaaccactgccgaaa 256

                               
Query: 425 cctgagccccaacctgagcc 444
           || ||||| |||||||||||
Sbjct: 257 ccagagcctcaacctgagcc 276



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>gb|AF331852.1| Saccharum hybrid cultivar CP72-2086 proline-rich protein (SPRP2)
           mRNA, partial cds
          Length = 590

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 407 cctaaaccagaaccgaaacctgagcc 432
           |||||||||||||| |||||||||||
Sbjct: 442 cctaaaccagaaccaaaacctgagcc 467



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>gb|AF331851.1| Saccharum hybrid cultivar CP65-357 proline-rich protein (PRP) gene,
            partial cds
          Length = 2548

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 407  cctaaaccagaaccgaaacctgagcc 432
            |||||||||||||| |||||||||||
Sbjct: 2206 cctaaaccagaaccaaaacctgagcc 2231



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                        
Query: 365  ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424
            ||||| |||||||||||||| || | |||||| || || |  ||| |||||   ||||||
Sbjct: 2248 ccaaaaccagagcctaagcctgagcccaagccagaaccaaaacctgaaccactgccgaaa 2307

                                
Query: 425  cctgagccccaacctgagcc 444
            || ||||| |||||||||||
Sbjct: 2308 ccagagcctcaacctgagcc 2327



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>gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, complete sequence
          Length = 220807

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 323   ccaaagccggagcccaaaccta 344
             ||||||||||||||||||||||
Sbjct: 19522 ccaaagccggagcccaaaccta 19543



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>ref|NM_174718.1| Bos taurus pinin, desmosome associated protein (PNN), mRNA
          Length = 4149

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  ctgagccccaacctgagcctat 447
            ||||||||||||||||||||||
Sbjct: 3137 ctgagccccaacctgagcctat 3158



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>emb|AL132943.3|CEY116F11B Caenorhabditis elegans YAC Y116F11B, complete sequence
          Length = 105778

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 339   aacctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384
             |||||| |||||||||||| || | ||| ||||| |||||||||||
Sbjct: 29323 aacctaagcctaagcctgatcctaagcctaagcctgagcctaagcc 29368



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>emb|AL032623.1|CEY43F8B Caenorhabditis elegans YAC Y43F8B, complete sequence
          Length = 101679

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 334   gcccaaacctatgcctaagcct 355
             ||||||||||||||||||||||
Sbjct: 61020 gcccaaacctatgcctaagcct 60999



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>gb|U77717.1|BTU77717 Bos taurus desmosome associated protein pinin mRNA, complete cds
          Length = 4167

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  ctgagccccaacctgagcctat 447
            ||||||||||||||||||||||
Sbjct: 3155 ctgagccccaacctgagcctat 3176



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>gb|AY623109.1| Homo sapiens TAF1 RNA polymerase II, TATA box binding protein
             (TBP)-associated factor, 250kDa (TAF1) gene, complete cds
          Length = 100711

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 214   ccccgagccggagcccaagcc 234
             |||||||||||||||||||||
Sbjct: 56552 ccccgagccggagcccaagcc 56532



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>emb|Z81502.1|CEF14B6 Caenorhabditis elegans Cosmid F14B6, complete sequence
          Length = 29283

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 299  cctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaa 351
            ||||||||||||||| | |||| ||| ||||   ||||||| |||||||||||
Sbjct: 7996 cctatgcctaagcctaagcccaagcccaagcgcaagcccaagcctatgcctaa 8048



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  agcccaagcctatgcctaaa 268
            ||||||||||||||||||||
Sbjct: 8030 agcccaagcctatgcctaaa 8049



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>ref|XM_764013.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_542_3431_1206)
            partial mRNA
          Length = 2226

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 423  aacctgagccccaacctgagcctat 447
            ||||||||||| |||||||||||||
Sbjct: 1778 aacctgagcccgaacctgagcctat 1802



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>gb|AF040648.2| Caenorhabditis elegans fosmid H19M22, complete sequence
          Length = 44699

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 307  taagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355
            |||||||||||| | ||| |||||  |||| ||||||| ||||||||||
Sbjct: 5521 taagcctgaacctaagcctaagcctaagcctaaacctaagcctaagcct 5569



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>gb|AF025452.3| Caenorhabditis elegans cosmid B0454, complete sequence
          Length = 44397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 248   gagcccaagcctatgcctaaacctgaacc 276
             ||||| ||||||| |||||||||||||||
Sbjct: 17685 gagcctaagcctaagcctaaacctgaacc 17713



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 341   cctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384
             |||| ||||||||||||||| | ||| |||||  ||||||||||
Sbjct: 25453 cctaagcctaagcctgaaccaaagcctaagcctaagcctaagcc 25496



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>gb|BC098513.1| Rattus norvegicus cDNA clone IMAGE:7124518, **** WARNING: chimeric
            clone ****
          Length = 6234

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 425  cctgagccccaacctgagcct 445
            |||||||||||||||||||||
Sbjct: 5043 cctgagccccaacctgagcct 5063



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>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence
          Length = 143786

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 249   agcccaagcctatgcctaaacctgaaccc 277
             |||| ||||||||| ||||||||||||||
Sbjct: 64140 agcctaagcctatggctaaacctgaaccc 64168



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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 182     gccgctgctggccggggcctc 202
               |||||||||||||||||||||
Sbjct: 2780694 gccgctgctggccggggcctc 2780674



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>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
              complete sequence
          Length = 151836

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 425    cctgagccccaacctgagcct 445
              |||||||||||||||||||||
Sbjct: 119908 cctgagccccaacctgagcct 119928



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>ref|XM_347237.2| PREDICTED: Rattus norvegicus similar to pinin (LOC368070), mRNA
          Length = 3407

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 425  cctgagccccaacctgagcct 445
            |||||||||||||||||||||
Sbjct: 1411 cctgagccccaacctgagcct 1431



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>gb|AF098994.1| Caenorhabditis elegans cosmid T06A4, complete sequence
          Length = 32053

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 249   agcccaagcctatgcctaaacctga 273
             ||||||||||||||||||| |||||
Sbjct: 24832 agcccaagcctatgcctaagcctga 24808



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 333   agcccaaacctatgcctaagcctga 357
             ||||||| |||||||||||||||||
Sbjct: 24832 agcccaagcctatgcctaagcctga 24808



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 280   gccgaagccggagcccacacctatgcctaagcctga 315
             |||||||||  ||||||  |||||||||||||||||
Sbjct: 24843 gccgaagcctaagcccaagcctatgcctaagcctga 24808



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>emb|Y08772.1|HSPABII Homo sapiens PABII pseudogene
          Length = 1930

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 214 ccccgagccggagcccaagcc 234
           |||||||||||||||||||||
Sbjct: 312 ccccgagccggagcccaagcc 332



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>emb|AL590762.1|HSXDPA Homo sapiens chromosome X  sequence from 6 PACs 1 BAC and 1 cosmid,
              region GJB1-DXS559 map Xq13.1; segment 1/2, complete
              sequence
          Length = 305000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 214    ccccgagccggagcccaagcc 234
              |||||||||||||||||||||
Sbjct: 262387 ccccgagccggagcccaagcc 262367



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>gb|AF022969.1| Caenorhabditis elegans cosmid C29G2, complete sequence
          Length = 19194

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 326   aagccggagcccaaacctatgcctaagcctga 357
             ||||||||||| || |||| ||||||||||||
Sbjct: 12809 aagccggagcctaagcctaagcctaagcctga 12840



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 206     gagaagctccccgagccggagccc 229
               ||||||| ||||||||||||||||
Sbjct: 1640851 gagaagccccccgagccggagccc 1640874



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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     agcacaagtgcagcaacagc 97
              ||||||||||||||||||||
Sbjct: 906400 agcacaagtgcagcaacagc 906381



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>gb|AE017130.1| Yersinia pestis biovar Medievalis str. 91001 section 4 of 16 of the
              complete genome
          Length = 290510

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ctccggcttcagcctcgcgg 182
              ||||||||||||||||||||
Sbjct: 280534 ctccggcttcagcctcgcgg 280515



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    gtgctcctcgtcgggctgctcgcg 160
              |||||||||||||||| |||||||
Sbjct: 622491 gtgctcctcgtcgggcagctcgcg 622468



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>gb|AF045637.2| Caenorhabditis elegans cosmid C44C11, complete sequence
          Length = 11710

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 304 gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355
           ||||||||||||||| ||||  || || ||||| || |||| ||||||||||
Sbjct: 333 gcctaagcctgaacctatgcttaaacctgagcctaagcctaagcctaagcct 282



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>ref|XM_359498.1| Magnaporthe grisea 70-15 predicted protein (MG05279.4) partial mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 214 ccccgagccggagcccaagc 233
           ||||||||||||||||||||
Sbjct: 528 ccccgagccggagcccaagc 547



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>ref|NM_002687.2| Homo sapiens pinin, desmosome associated protein (PNN), mRNA
          Length = 2598

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1481 ctgagccccaacctgagcct 1500



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>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10,
             complete sequence
          Length = 138209

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 322   gccaaagccggagcccaaacctatgcctaagcctga 357
             ||||||||| || || ||||||| ||||||||||||
Sbjct: 83022 gccaaagcctgaaccgaaacctaagcctaagcctga 82987



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   ccaaagccggagcccaaacc 342
             ||||||||||||||||||||
Sbjct: 58499 ccaaagccggagcccaaacc 58480



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>gb|AY659008.1| Synthetic construct Peudomonas aeruginosa clone FLH042650.01F
           PA1407 gene, partial cds
          Length = 942

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 tcgcggccgctgctggccgg 196
           ||||||||||||||||||||
Sbjct: 90  tcgcggccgctgctggccgg 109



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>gb|AE002104.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 5 of 59 of the
            complete genome
          Length = 21206

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 409  taaaccagaaccgaaacctgagcc 432
            |||||||||||| |||||||||||
Sbjct: 3006 taaaccagaaccaaaacctgagcc 3029



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 137     gtgctcctcgtcgggctgctcgcg 160
               |||||||||||||||| |||||||
Sbjct: 3152913 gtgctcctcgtcgggcagctcgcg 3152936



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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     ctccggcttcagcctcgcgg 182
               ||||||||||||||||||||
Sbjct: 1364613 ctccggcttcagcctcgcgg 1364632



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>gb|AF043706.4| Caenorhabditis elegans cosmid ZC123, complete sequence
          Length = 44292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 326   aagccggagcccaaacctatgcctaagcctga 357
             ||||| ||||| ||||||| ||||||||||||
Sbjct: 30865 aagcctgagcctaaacctaagcctaagcctga 30834



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 284   aagccggagcccacacctatgcctaagcctgaacccatgccaaagccggagcccaaacct 343
             ||||| ||||| | ||||| ||||||||||||    | ||| |||||  |||||||||||
Sbjct: 30865 aagcctgagcctaaacctaagcctaagcctgaggttaagcctaagcctaagcccaaacct 30806

                         
Query: 344   atgcctaagcct 355
             | ||||||||||
Sbjct: 30805 aagcctaagcct 30794



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 326   aagccggagcccaaacctatgcctaagcctga 357
             ||||| ||||| ||||||| ||||||||||||
Sbjct: 30409 aagcctgagcctaaacctaagcctaagcctga 30378



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 284   aagccggagcccacacctatgcctaagcctgaacccatgccaaagccggagcccaaacct 343
             ||||| ||||| | ||||| ||||||||||||    | ||| |||||  |||||||||||
Sbjct: 30409 aagcctgagcctaaacctaagcctaagcctgaggttaagcctaagcctaagcccaaacct 30350

                         
Query: 344   atgcctaagcct 355
             | ||||||||||
Sbjct: 30349 aagcctaagcct 30338



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>ref|XM_843078.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0476)
            partial mRNA
          Length = 5088

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   agcacaagtgcagcaacagc 97
            ||||||||||||||||||||
Sbjct: 2051 agcacaagtgcagcaacagc 2070



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>emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, complete sequence
          Length = 122592

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 248   gagcccaagcctatgcctaaacct 271
             ||||| ||||||||||||||||||
Sbjct: 75338 gagcctaagcctatgcctaaacct 75361



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>emb|AL110501.1|CEY79H2A Caenorhabditis elegans YAC Y79H2A, complete sequence
          Length = 66144

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 341   cctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384
             ||||||||||||||| |||| | ||| |||||  ||||||||||
Sbjct: 12436 cctatgcctaagcctaaacctaagcccaagcctaagcctaagcc 12479



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>gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, complete sequence
          Length = 138102

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   ccaaagccagagcctaagcc 384
             ||||||||||||||||||||
Sbjct: 13553 ccaaagccagagcctaagcc 13534



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>gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, complete sequence
          Length = 243114

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    ccaaagccagagcctaagcc 384
              ||||||||||||||||||||
Sbjct: 185157 ccaaagccagagcctaagcc 185138



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>emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 in linkage group 9,
              complete sequence
          Length = 214459

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 365    ccaaagccagagcctaagccagaactcaagcc 396
              |||||||||||||| ||||| ||||| |||||
Sbjct: 209430 ccaaagccagagccaaagcctgaacttaagcc 209399



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>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3'
              end of the PRKCZ gene for protein kinase C zeta, a novel
              gene, a novel gene (FLJ31031), the SKI gene for v-ski
              sarcoma viral oncogene homolog (avian) and five CpG
              islands, complete sequence
          Length = 179836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aacagctgcgagaaagcagc 111
              ||||||||||||||||||||
Sbjct: 130851 aacagctgcgagaaagcagc 130832



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>emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in linkage group 23,
             complete sequence
          Length = 220945

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   tgcctaaaccagaaccgaaacctg 428
             |||||||||||||||| |||||||
Sbjct: 95546 tgcctaaaccagaaccaaaacctg 95569



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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     ctccggcttcagcctcgcgg 182
               ||||||||||||||||||||
Sbjct: 1356735 ctccggcttcagcctcgcgg 1356754



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 137     gtgctcctcgtcgggctgctcgcg 160
               |||||||||||||||| |||||||
Sbjct: 2882854 gtgctcctcgtcgggcagctcgcg 2882877



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>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              1/8
          Length = 348517

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 371    ccagagcctaagccagaactcaagcccgagcc 402
              |||||||| ||||| |||| ||||||||||||
Sbjct: 222983 ccagagcccaagccggaacccaagcccgagcc 223014



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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 139    gctcctcgtcgggctgctcgcggc 162
              |||||| |||||||||||||||||
Sbjct: 248933 gctcctggtcgggctgctcgcggc 248910



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>emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; segment 13/20
          Length = 258050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ctccggcttcagcctcgcgg 182
             ||||||||||||||||||||
Sbjct: 55324 ctccggcttcagcctcgcgg 55343



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>emb|CR615582.1| full-length cDNA clone CS0DA003YN20 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1595

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1419 ctgagccccaacctgagcct 1438



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>gb|AF003148.2| Caenorhabditis elegans cosmid F32B5, complete sequence
          Length = 38138

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 349  taagcctgaacccatgccaaagccagagcctaagcc 384
            |||||||||||| | |||||||||  ||||||||||
Sbjct: 9567 taagcctgaacctaagccaaagcctaagcctaagcc 9532



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>emb|CR622090.1| full-length cDNA clone CS0DF038YF23 of Fetal brain of Homo sapiens
           (human)
          Length = 1977

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 ctgagccccaacctgagcct 445
           ||||||||||||||||||||
Sbjct: 878 ctgagccccaacctgagcct 897



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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 413     ccagaaccgaaacctgagccccaacctgagcc 444
               ||||||||| |||| ||||| |||||||||||
Sbjct: 4501124 ccagaaccgcaaccagagccacaacctgagcc 4501155



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>ref|XM_686048.1| PREDICTED: Danio rerio similar to junctophilin type 2 (LOC562673),
            mRNA
          Length = 2229

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 405  tgcctaaaccagaaccgaaacctg 428
            |||||||||||||||| |||||||
Sbjct: 1073 tgcctaaaccagaaccaaaacctg 1096



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>ref|XM_703822.1| PREDICTED: Danio rerio similar to junctophilin 2, transcript variant
            2 (LOC562494), mRNA
          Length = 3252

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 405  tgcctaaaccagaaccgaaacctg 428
            |||||||||||||||| |||||||
Sbjct: 2096 tgcctaaaccagaaccaaaacctg 2119



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>ref|XM_682740.1| PREDICTED: Danio rerio similar to junctophilin 2, transcript variant
            1 (LOC562494), mRNA
          Length = 3282

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 405  tgcctaaaccagaaccgaaacctg 428
            |||||||||||||||| |||||||
Sbjct: 2126 tgcctaaaccagaaccaaaacctg 2149



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>ref|XM_678616.1| PREDICTED: Danio rerio similar to titin isoform N2-B (LOC555953), mRNA
          Length = 18297

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 365   ccaaagccagagcctaagccagaactcaagcc 396
             |||||||||||||| ||||| ||||| |||||
Sbjct: 15772 ccaaagccagagccaaagcctgaacttaagcc 15803



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>gb|AC087794.1| Caenorhabditis elegans cosmid Y32G9A, complete sequence
          Length = 48110

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 332   gagcccaaacctatgcctaagcct 355
             ||||||||||||| ||||||||||
Sbjct: 31775 gagcccaaacctaagcctaagcct 31752



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>gb|AY224438.1| Oryza sativa (japonica cultivar-group) isolate 23221 proline-rich
            protein mRNA, complete cds
          Length = 1251

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 322  gccaaagccggagcccaaacctatgcctaagcctga 357
            ||||||||| || || ||||||| ||||||||||||
Sbjct: 1149 gccaaagcctgaaccgaaacctaagcctaagcctga 1184



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>gb|AC006620.1|AC006620 Caenorhabditis elegans cosmid C51G7, complete sequence
          Length = 44031

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 341   cctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384
             ||||||||||||||| |||| | ||| |||||  ||||||||||
Sbjct: 23255 cctatgcctaagcctaaacctaagcccaagcctaagcctaagcc 23212



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>gb|AF130351.2|AF130351 Homo sapiens chromosome 21 clone PAC 190N10 map 21q11.2, complete
             sequence
          Length = 102043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cacatccactttatctatcc 47
             ||||||||||||||||||||
Sbjct: 54326 cacatccactttatctatcc 54345



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>dbj|AK028219.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2810021K19 product:pinin, full
            insert sequence
          Length = 3259

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1432 ctgagccccaacctgagcct 1451



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>gb|BC091782.1| Danio rerio JPH2 protein, mRNA (cDNA clone IMAGE:7137591), partial
            cds
          Length = 2465

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 405  tgcctaaaccagaaccgaaacctg 428
            |||||||||||||||| |||||||
Sbjct: 1797 tgcctaaaccagaaccaaaacctg 1820



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>gb|AF040652.2| Caenorhabditis elegans cosmid T05A8, complete sequence
          Length = 33896

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 333   agcccaaacctatgcctaagcctgaacccatgccaaagcc 372
             |||||||||||| |||||||||| | || ||||| |||||
Sbjct: 22503 agcccaaacctaggcctaagcctaagcctatgcctaagcc 22542



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>gb|AF016669.1| Caenorhabditis elegans cosmid K10G6, complete sequence
          Length = 33588

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 249   agcccaagcctatgcctaaacctgaacc 276
             |||| ||||||| |||||||||||||||
Sbjct: 20701 agcctaagcctaagcctaaacctgaacc 20674



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>emb|CR377872.1| Pinus pinaster SSR, clone PPB3A06r
          Length = 536

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 364 gccaaagccagagcctaagccaga 387
           ||||||||||||||| ||||||||
Sbjct: 302 gccaaagccagagccaaagccaga 325



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>emb|CR377871.1| Pinus pinaster SSR, clone PPB3A06
          Length = 582

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 364 gccaaagccagagcctaagccaga 387
           ||||||||||||||| ||||||||
Sbjct: 294 gccaaagccagagccaaagccaga 271



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 322     gccaaagccggagcccaaacctatgcctaagcctga 357
               ||||||||| || || ||||||| ||||||||||||
Sbjct: 7646627 gccaaagcctgaaccgaaacctaagcctaagcctga 7646592



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     ccaaagccggagcccaaacc 342
               ||||||||||||||||||||
Sbjct: 7622104 ccaaagccggagcccaaacc 7622085



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>gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone
              BACR13H19, complete sequence
          Length = 155666

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 364    gccaaagccagagcctaagccaga 387
              ||||||||||||||| ||||||||
Sbjct: 143606 gccaaagccagagccaaagccaga 143583



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>gb|AC007947.5|AC007947 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone
             BACR11O03, complete sequence
          Length = 168505

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 364   gccaaagccagagcctaagccaga 387
             ||||||||||||||| ||||||||
Sbjct: 28671 gccaaagccagagccaaagccaga 28648



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>gb|AC154309.1| Mus musculus BAC clone RP23-370I7 from chromosome 16, complete sequence
          Length = 178958

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     cacaccacatccactttatc 42
              ||||||||||||||||||||
Sbjct: 100851 cacaccacatccactttatc 100870



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>dbj|AK223612.1| Homo sapiens mRNA for pinin, desmosome associated protein variant,
            clone: FCC133C12
          Length = 2533

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1429 ctgagccccaacctgagcct 1448



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>gb|AF195139.1|AF195139 Homo sapiens pinin (PNN) gene, complete cds
          Length = 11787

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 9100 ctgagccccaacctgagcct 9119



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>gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 of the complete
            genome
          Length = 11398

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  tcgcggccgctgctggccgg 196
            ||||||||||||||||||||
Sbjct: 4115 tcgcggccgctgctggccgg 4096



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>emb|BX248228.3| Zebrafish DNA sequence from clone RP71-40J23 in linkage group 23,
             complete sequence
          Length = 141134

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   tgcctaaaccagaaccgaaacctg 428
             |||||||||||||||| |||||||
Sbjct: 94127 tgcctaaaccagaaccaaaacctg 94150



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>emb|AL954299.13| Mouse DNA sequence from clone RP23-399D3 on chromosome 2, complete
             sequence
          Length = 142229

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    cagaggaaccacacaccaca 31
             ||||||||||||||||||||
Sbjct: 26146 cagaggaaccacacaccaca 26127



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>dbj|BS000011.1| Pan troglodytes chromosome 22 clone:RP43-017I17, map 22, complete
             sequences
          Length = 191345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cacatccactttatctatcc 47
             ||||||||||||||||||||
Sbjct: 43775 cacatccactttatctatcc 43794



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>emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein
          Length = 1648

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 364 gccaaagccagagcctaagccaga 387
           |||||||||||| |||||||||||
Sbjct: 506 gccaaagccagaacctaagccaga 529



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>dbj|AK100217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045I16, full
           insert sequence
          Length = 1510

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 323 ccaaagccggagcccaaacc 342
           ||||||||||||||||||||
Sbjct: 680 ccaaagccggagcccaaacc 699



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>gb|AF112222.1|AF112222 Homo sapiens nuclear protein SDK3 mRNA, complete cds
          Length = 3122

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1477 ctgagccccaacctgagcct 1496



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>emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cacatccactttatctatcc 47
             ||||||||||||||||||||
Sbjct: 19460 cacatccactttatctatcc 19479



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>gb|BC062602.1| Homo sapiens pinin, desmosome associated protein, mRNA (cDNA clone
            MGC:70809 IMAGE:5491466), complete cds
          Length = 2427

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1405 ctgagccccaacctgagcct 1424



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>emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, complete sequence
          Length = 277607

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 333   agcccaaacctatgcctaagcctgaacccatgccaaagcc 372
             |||| ||||||  ||||||||||||||| ||||| |||||
Sbjct: 38574 agcctaaacctgagcctaagcctgaacctatgcctaagcc 38613



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>gb|AF098988.4| Caenorhabditis elegans cosmid C50E10, complete sequence
          Length = 43461

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 304   gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355
             ||||||||||||||| ||||  || || ||||| || |||| ||||||||||
Sbjct: 42994 gcctaagcctgaacctatgcttaaacctgagcctaagcctaagcctaagcct 42943



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>gb|AF337054.1| Oryza sativa repetitive proline rich protein mRNA, complete cds
          Length = 1493

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 323 ccaaagccggagcccaaacc 342
           ||||||||||||||||||||
Sbjct: 649 ccaaagccggagcccaaacc 668



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>emb|AL732421.9| Zebrafish DNA sequence from clone BUSM1-249N21 in linkage group 9,
             complete sequence
          Length = 90803

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 365   ccaaagccagagcctaagccagaactcaagcc 396
             |||||||||||||| ||||| ||||| |||||
Sbjct: 58228 ccaaagccagagccaaagcctgaacttaagcc 58259



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>gb|AY109604.1| Zea mays CL1298_1 mRNA sequence
          Length = 1739

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 364 gccaaagccagagcctaagccaga 387
           |||||||||||| |||||||||||
Sbjct: 506 gccaaagccagaacctaagccaga 529



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>gb|AY109530.1| Zea mays CL1228_1 mRNA sequence
          Length = 1471

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  ccaaagccagagcctaagcc 384
            ||||||||||||||||||||
Sbjct: 1054 ccaaagccagagcctaagcc 1073



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>emb|AL032637.1|CEY43F8C Caenorhabditis elegans YAC Y43F8C, complete sequence
          Length = 120492

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 248   gagcccaagcctatgcctaaacct 271
             ||||| ||||||||||||||||||
Sbjct: 67824 gagcctaagcctatgcctaaacct 67847



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>emb|Z46996.1|CEC34C12 Caenorhabditis elegans Cosmid C34C12, complete sequence
          Length = 34759

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 320   atgccaaagccggagcccaaacctatgcctaagcct 355
             |||||||||||| |||| |||| || ||||||||||
Sbjct: 25426 atgccaaagccgaagcctaaacttaagcctaagcct 25461



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>emb|AL139020.5|CNS01DX2 Human chromosome 14 DNA sequence BAC R-164H13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166308

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   cgctgctggccggggcctcg 203
             ||||||||||||||||||||
Sbjct: 51015 cgctgctggccggggcctcg 50996



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>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete
              sequence
          Length = 231562

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 364    gccaaagccagagcctaagccaga 387
              ||||||||||||||| ||||||||
Sbjct: 190876 gccaaagccagagccaaagccaga 190853



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>emb|AL132639.4|CNS01DT4 Human chromosome 14 DNA sequence BAC R-407N17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196319

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   ctgagccccaacctgagcct 445
             ||||||||||||||||||||
Sbjct: 23936 ctgagccccaacctgagcct 23955



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 179     gcggccgctgctggccgggg 198
               ||||||||||||||||||||
Sbjct: 3802023 gcggccgctgctggccgggg 3802004



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>gb|AC024796.1| Caenorhabditis elegans cosmid Y48G1C, complete sequence
          Length = 60391

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 254  aagcctatgcctaaacctga 273
            ||||||||||||||||||||
Sbjct: 9647 aagcctatgcctaaacctga 9666



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>gb|U77718.1|HSU77718 Human desmosome associated protein pinin mRNA, complete cds
          Length = 2617

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1424 ctgagccccaacctgagcct 1443



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>emb|X82241.1|HSTCL1SP1 H.sapiens TCL1 gene
          Length = 560

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cgctgctggccggggcctcg 203
           ||||||||||||||||||||
Sbjct: 137 cgctgctggccggggcctcg 156



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>emb|Y10351.1|HSSDK3 H.sapiens mRNA for nuclear protein SDK3, partial
          Length = 2956

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1381 ctgagccccaacctgagcct 1400



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>emb|Y09703.1|HSMEMA H.sapiens mRNA for MEMA protein
          Length = 3278

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ctgagccccaacctgagcct 445
            ||||||||||||||||||||
Sbjct: 1404 ctgagccccaacctgagcct 1423


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,016,307
Number of Sequences: 3902068
Number of extensions: 3016307
Number of successful extensions: 60829
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59542
Number of HSP's gapped (non-prelim): 1253
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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