| Clone Name | baet29a10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein Length = 1487 Score = 246 bits (124), Expect = 5e-62 Identities = 178/195 (91%), Gaps = 7/195 (3%) Strand = Plus / Plus Query: 71 gcggtgaagcacaa-gtgcagcaacagctgcgagaa------agcagcaatggcgaggca 123 |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 47 gcggtgaagcacaaagtgcagcaagagctgcgagaaggagcgagcagcaatggcgaggca 106 Query: 124 cagcctccttgccgtgctcctcgtcgggctgctcgcggcctccggcttcagcctcgcggc 183 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 107 cagcctccttgccgtgctcctcgtcgggctggtcgcggcctccggcttcagccaggcggc 166 Query: 184 cgctgctggccggggcctcgtcgagaagctccccgagccggagcccaagcccacgccgta 243 ||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 167 cgccgctggccggggccttgctgagaagctccccgagccggagcccaagccgacgccgta 226 Query: 244 cccggagcccaagcc 258 ||| ||||||||||| Sbjct: 227 cccagagcccaagcc 241 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 255 agcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcctaagcctg 314 |||| |||||||| |||||||||||||| ||||| ||||| | ||| ||||||| |||| Sbjct: 256 agccaatgcctaagcctgaacccatgccaaagccagagcctaagcctctgcctaaacctg 315 Query: 315 aacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccag 374 ||||||||||||| || ||||| || ||| |||| || |||||||||||||||||||||| Sbjct: 316 aacccatgccaaaaccagagcctaagcctctgcccaaacctgaacccatgccaaagccag 375 Query: 375 agcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccc 433 |||| || || || | ||||| |||||||| || || || ||||| || ||||||||| Sbjct: 376 agcccaaaccggagccgaagccggagccgatcccaaagcccgaaccaaagcctgagccc 434 Score = 107 bits (54), Expect = 3e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 248 gagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcct 307 ||||| |||||| |||||||||||||||||||||| || || ||||| | ||| |||| Sbjct: 291 gagcctaagcctctgcctaaacctgaacccatgccaaaaccagagcctaagcctctgccc 350 Query: 308 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 367 || |||||||||||||||||||| ||||||||||| ||| ||||| || || || ||| Sbjct: 351 aaacctgaacccatgccaaagccagagcccaaaccggagccgaagccggagccgatccca 410 Query: 368 aagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacct 427 ||||| || || ||||| || | |||||| || |||||||| ||||| || || || ||| Sbjct: 411 aagcccgaaccaaagcctgagcccaagcctgacccgatgcccaaacctgagcctaagcct 470 Query: 428 gagccc 433 |||||| Sbjct: 471 gagccc 476 Score = 95.6 bits (48), Expect = 1e-16 Identities = 162/200 (81%) Strand = Plus / Plus Query: 248 gagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatgcct 307 ||||| |||||| |||| ||||||||||||||||| ||||| ||||||| ||| ||| Sbjct: 333 gagcctaagcctctgcccaaacctgaacccatgccaaagccagagcccaaaccggagccg 392 Query: 308 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 367 ||||| || || || |||||||| || || || ||| ||| |||||||| || ||||| Sbjct: 393 aagccggagccgatcccaaagcccgaaccaaagcctgagcccaagcctgacccgatgccc 452 Query: 368 aagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacct 427 || || ||||||||||| || | |||||| ||||||||||| ||||| ||||| || || Sbjct: 453 aaacctgagcctaagcctgagcccaagccagagccgatgcccaaaccggaaccaaagcca 512 Query: 428 gagccccaacctgagcctat 447 |||||| | || |||||||| Sbjct: 513 gagcccaagcccgagcctat 532 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 308 aagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatgcca 367 |||||||| || |||||||| ||||| ||||| ||| ||| |||||||| || |||||| Sbjct: 729 aagcctgagccgatgccaaaaccggaacccaagcctgagcccaagcctgagccgatgcca 788 Query: 368 aagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacct 427 || || ||||| ||||| || | |||||||||||||||||| ||||| ||||| || ||| Sbjct: 789 aaaccggagcccaagcccgagcccaagcccgagccgatgccaaaaccggaaccaaagcct 848 Query: 428 gagccc 433 |||||| Sbjct: 849 gagccc 854 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421 |||||||| || || || |||||||| | |||||||||||||||||||||||||||||| Sbjct: 594 atgccaaaacccgaaccgaagccagagcccaagcccgagccgatgcctaaaccagaacca 653 Query: 422 aaacctgagccccaacctgagcc 444 || || |||||| |||| ||||| Sbjct: 654 aagccagagcccaaacccgagcc 676 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 323 ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382 |||||||| ||||||||||| ||| ||||| || || ||||||||||| || || ||| Sbjct: 966 ccaaagccagagcccaaacccgagcccaagccagagccgatgccaaagccggaaccaaag 1025 Query: 383 ccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccccaacctgag 442 || || | |||||||||||| ||||| || ||||||||||| || |||||| | |||||| Sbjct: 1026 cccgagcccaagcccgagccaatgccgaagccagaaccgaagccagagcccaagcctgag 1085 Query: 443 cc 444 || Sbjct: 1086 cc 1087 Score = 71.9 bits (36), Expect = 2e-09 Identities = 159/200 (79%) Strand = Plus / Plus Query: 245 ccggagcccaagcctatgcctaaacctgaacccatgccgaagccggagcccacacctatg 304 ||||| ||||||||| ||| || ||||| || ||||| || |||||||||| || | Sbjct: 750 ccggaacccaagcctgagcccaagcctgagccgatgccaaaaccggagcccaagcccgag 809 Query: 305 cctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaacccatg 364 || ||||| || || |||||||| ||||| || || ||| ||| |||||| | || ||| Sbjct: 810 cccaagcccgagccgatgccaaaaccggaaccaaagcctgagcccaagccttacccaatg 869 Query: 365 ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424 || || || ||||||||||| || | ||| |||||||||||||| ||||||||||| || Sbjct: 870 cccaaacctgagcctaagcctgagcccaaacccgagccgatgcccaaaccagaaccaaag 929 Query: 425 cctgagccccaacctgagcc 444 || |||||| |||| ||||| Sbjct: 930 ccagagcccaaacccgagcc 949 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 377 cctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccccaa 436 ||||||||||| | |||||| ||||||||||| ||||| ||||| || ||||||||| | Sbjct: 714 cctaagccagagcccaagcctgagccgatgccaaaaccggaacccaagcctgagcccaag 773 Query: 437 cctgagcc 444 |||||||| Sbjct: 774 cctgagcc 781 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 346 gcctaagcctgaacccatgccaaagccagagcctaagcc 384 ||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 1133 gcctaagcctgaacctatgcctaagccagagcccaagcc 1171 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 350 aagcctgaacccatgccaaagccagagcctaagcc 384 |||||||| || ||||||||||||||||||||||| Sbjct: 1077 aagcctgagccgatgccaaagccagagcctaagcc 1111 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 320 atgccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcct 379 |||||||||||||| || || || ||| ||||| || || ||||| |||||||| || Sbjct: 1005 atgccaaagccggaaccaaagcccgagcccaagcccgagccaatgccgaagccagaaccg 1064 Query: 380 aagccagaactcaagcccgagccgatgcctaaaccaga 417 |||||||| | |||||| ||||||||||| || ||||| Sbjct: 1065 aagccagagcccaagcctgagccgatgccaaagccaga 1102 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 380 aagccagaactcaagcccgagccgatgcctaaaccagaaccgaaacctgagccccaacct 439 |||||||| | |||||||||||| ||||| ||||| ||||| || || |||||| |||| Sbjct: 507 aagccagagcccaagcccgagcctatgccaaaacctgaaccaaagcccgagcccaaaccc 566 Query: 440 gagcc 444 ||||| Sbjct: 567 gagcc 571 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 304 gcctaagcctgaacccatgccaaagccggagcccaa 339 ||||||||||||||| ||||| ||||| |||||||| Sbjct: 1133 gcctaagcctgaacctatgcctaagccagagcccaa 1168 Score = 46.1 bits (23), Expect = 0.097 Identities = 68/83 (81%) Strand = Plus / Plus Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421 ||||| || ||||| || |||||||| | ||| |||||||||||||| || || ||||| Sbjct: 909 atgcccaaaccagaaccaaagccagagcccaaacccgagccgatgccaaagccggaacca 968 Query: 422 aaacctgagccccaacctgagcc 444 || || |||||| |||| ||||| Sbjct: 969 aagccagagcccaaacccgagcc 991 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 agcccaagcctatgcctaaacctgaacc 276 ||||| |||||||||| ||||||||||| Sbjct: 520 agcccgagcctatgccaaaacctgaacc 547
>emb|AJ234401.1|HVU234401 Hordeum vulgare partial mRNA; clone cMWG0646 Length = 694 Score = 125 bits (63), Expect = 1e-25 Identities = 69/71 (97%) Strand = Plus / Plus Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 113 atgccaaagcccgagcctaagccagaacccaagcccgagccgatgcctaaaccagaaccg 172 Query: 422 aaacctgagcc 432 ||||||||||| Sbjct: 173 aaacctgagcc 183 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 346 gcctaagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgat 405 ||||||||| ||||||| ||| |||| |||||| ||||||| || || ||||| || Sbjct: 127 gcctaagccagaacccaagcccgagccgatgcctaaaccagaaccgaaacctgagcctat 186 Query: 406 gcctaaaccagaaccgaaacctgagccccaacctgagcc 444 |||||||||||||||||||||||||||| |||||||||| Sbjct: 187 gcctaaaccagaaccgaaacctgagcccaaacctgagcc 225 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 346 gcctaagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgat 405 ||||||||| || || |||||||| || || || |||||||| | ||||||||||||||| Sbjct: 315 gcctaagcccgagccgatgccaaaacccgaaccaaagccagagcccaagcccgagccgat 374 Query: 406 gcctaaaccagaaccgaaacctgagccc 433 ||| ||||| |||||||| ||||||||| Sbjct: 375 gccgaaacccgaaccgaagcctgagccc 402 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 398 gagccgatgcctaaaccagaaccgaaacctgagccccaacctgagcc 444 ||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 3 gagcctatgcctaaaccagaaccgaaacctgagcccaaacctgagcc 49 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 350 aagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgatgcct 409 |||||| | |||||||| || || ||||||||||| || | ||| || ||||||||||| Sbjct: 403 aagccttaccccatgcccaaacctgagcctaagcctgagcccaaaccagagccgatgcca 462 Query: 410 aaaccagaaccgaaacctgagccccaacctgagcc 444 ||||| ||||| || || |||||| |||| ||||| Sbjct: 463 aaacccgaaccaaagccagagcccaaaccagagcc 497 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 346 gcctaagcctgaacccatgccaaagccagagcctaagccagaactcaagcccgagccgat 405 |||| ||||| |||| |||||||| || || || |||||||| | |||||||||||||| Sbjct: 546 gcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccgag 605 Query: 406 gcctaaacc 414 ||| ||||| Sbjct: 606 gccaaaacc 614 Score = 48.1 bits (24), Expect = 0.025 Identities = 60/72 (83%) Strand = Plus / Plus Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421 |||||||| || || || |||||||| | ||||||||||||||||| ||||| ||||| Sbjct: 289 atgccaaaacccgaaccaaagccagagcctaagcccgagccgatgccaaaacccgaacca 348 Query: 422 aaacctgagccc 433 || || |||||| Sbjct: 349 aagccagagccc 360 Score = 46.1 bits (23), Expect = 0.097 Identities = 68/83 (81%) Strand = Plus / Plus Query: 362 atgccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccg 421 |||||||| || || || |||||||| | ||| || ||||||||||| ||||| ||||| Sbjct: 457 atgccaaaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaacca 516 Query: 422 aaacctgagccccaacctgagcc 444 || || |||||| |||| ||||| Sbjct: 517 aagccagagcccaaacccgagcc 539 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 391 caagcccgagccgatgcctaaaccagaacc 420 |||||||||||||||||| ||||| ||||| Sbjct: 276 caagcccgagccgatgccaaaacccgaacc 305
>gb|AF026211.2| Caenorhabditis elegans cosmid T13B5, complete sequence Length = 31469 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 333 agcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382 |||| ||||||| |||||||||||| || |||||||||||| || ||||| Sbjct: 12945 agcctaaacctaggcctaagcctgagcctatgccaaagccaaaggctaag 12994 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 298 acctatgcctaagcctgaacccatgccaaagcc 330 ||||| |||||||||||| || ||||||||||| Sbjct: 12952 acctaggcctaagcctgagcctatgccaaagcc 12984
>gb|AF063008.1| Caenorhabditis elegans cosmid F25F1, complete sequence Length = 16325 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 299 cctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcctgaa 358 |||| ||| |||||||| || | ||||||||| |||| || |||| |||||||||| | Sbjct: 2084 cctaagccaaagcctgagcctaagccaaagcctgagcttaagcctaagcctaagcctaag 2025 Query: 359 cccatgccaaagccagagcctaagccagaactcaagcc 396 || | ||| ||||| ||||||||||| |||||||||| Sbjct: 2024 ccgaagcctaagcctgagcctaagcctaaactcaagcc 1987
>ref|NM_061512.1| Caenorhabditis elegans COLlagen family member (col-40) (col-40) mRNA, complete cds Length = 1251 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 333 agcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382 |||| ||||||| |||||||||||| || |||||||||||| || ||||| Sbjct: 1078 agcctaaacctaggcctaagcctgagcctatgccaaagccaaaggctaag 1029 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 298 acctatgcctaagcctgaacccatgccaaagcc 330 ||||| |||||||||||| || ||||||||||| Sbjct: 1071 acctaggcctaagcctgagcctatgccaaagcc 1039
>emb|Y17332.1|ZMPROPR Zea mays mRNA for proline-rich protein Length = 1471 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagccagaac 389 ||||||||||||||||||||||||| Sbjct: 886 ccaaagccagagcctaagccagaac 910 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccagaac 389 ||||||||||||||||||||| |||| Sbjct: 921 gccaaagccagagcctaagcccgaac 946 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccagaac 389 ||||||||||||||||||||| |||| Sbjct: 753 gccaaagccagagcctaagcccgaac 778 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 406 gcctaaaccagaaccgaaacctgagccccaacc 438 ||||||||| ||||| ||||| ||||||||||| Sbjct: 1089 gcctaaacccgaaccaaaaccagagccccaacc 1121 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagcc 384 |||||||||||||||||||| Sbjct: 1054 ccaaagccagagcctaagcc 1073
>emb|AJ130830.1|ZMA130830 Zea mays gene encoding putative cell wall protein Length = 1792 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagccagaac 389 ||||||||||||||||||||||||| Sbjct: 866 ccaaagccagagcctaagccagaac 890 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccagaac 389 ||||||||||||||||||||| |||| Sbjct: 901 gccaaagccagagcctaagcccgaac 926 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccagaac 389 ||||||||||||||||||||| |||| Sbjct: 733 gccaaagccagagcctaagcccgaac 758 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 406 gcctaaaccagaaccgaaacctgagccccaacc 438 ||||||||| ||||| ||||| ||||||||||| Sbjct: 1069 gcctaaacccgaaccaaaaccagagccccaacc 1101 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagcc 384 |||||||||||||||||||| Sbjct: 1034 ccaaagccagagcctaagcc 1053
>gb|AF067947.2| Caenorhabditis elegans cosmid T10B5, complete sequence Length = 40837 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 322 gccaaagccggagcccaaacctatgcctaagcctga 357 |||||||||| |||| || ||||||||||||||||| Sbjct: 21570 gccaaagccgaagccgaagcctatgcctaagcctga 21535
>ref|NM_008891.1| Mus musculus pinin (Pnn), mRNA Length = 2813 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 1418 aacctgagccccaacctgagcct 1440
>gb|AF016678.1| Caenorhabditis elegans cosmid K07E8, complete sequence Length = 36763 Score = 46.1 bits (23), Expect = 0.097 Identities = 53/63 (84%) Strand = Plus / Minus Query: 323 ccaaagccggagcccaaacctatgcctaagcctgaacccatgccaaagccagagcctaag 382 |||||||| ||||| ||| ||| || ||||||| | || |||||||||||| | |||||| Sbjct: 13609 ccaaagcctgagccaaaatctaagcgtaagcctaagcctatgccaaagccaaaacctaag 13550 Query: 383 cca 385 ||| Sbjct: 13549 cca 13547
>gb|AF519479.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1183 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 406 gcctaaaccagaaccgaaacctgagccccaacctgagcc 444 |||||| |||||||| ||||||||||| |||||||||| Sbjct: 838 gcctaagccagaaccaaaacctgagccaaaacctgagcc 876 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 407 cctaaaccagaaccgaaacctgagcc 432 |||||||||||||| ||||||||||| Sbjct: 887 cctaaaccagaaccaaaacctgagcc 912
>dbj|AK161109.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732437N05 product:pinin, full insert sequence Length = 2451 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 1428 aacctgagccccaacctgagcct 1450
>dbj|AK157587.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830225B07 product:pinin, full insert sequence Length = 2589 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 1431 aacctgagccccaacctgagcct 1453
>dbj|AK160616.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700028H03 product:pinin, full insert sequence Length = 2441 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 1422 aacctgagccccaacctgagcct 1444
>dbj|AK050669.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920030P20 product:pinin, full insert sequence Length = 2358 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 1433 aacctgagccccaacctgagcct 1455
>dbj|AK030978.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830474F19 product:pinin, full insert sequence Length = 3286 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 1416 aacctgagccccaacctgagcct 1438
>gb|AY129403.1| Mus musculus pinin gene, complete cds Length = 7080 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 5117 aacctgagccccaacctgagcct 5139
>dbj|AK198012.1| Mus musculus cDNA, clone:Y1G0126N13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021381, based on BLAT search Length = 397 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 193 aacctgagccccaacctgagcct 215
>gb|AC132607.4| Mus musculus BAC clone RP23-447F22 from 12, complete sequence Length = 194101 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 69280 aacctgagccccaacctgagcct 69302
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence Length = 193547 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 10276 aacctgagccccaacctgagcct 10254
>emb|Y08701.1|MMPININ M.musculus mRNA for Pinin protein Length = 2813 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcct 445 ||||||||||||||||||||||| Sbjct: 1418 aacctgagccccaacctgagcct 1440
>gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, complete sequence Length = 107705 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 298 acctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355 ||||| |||||||||||| || ||||| ||||| |||| || |||| |||||||||| Sbjct: 92057 acctaagcctaagcctgagcctatgcctaagcctaagcctaagcctaagcctaagcct 92000 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 340 acctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384 ||||| |||||||||||| || ||||| ||||| |||||||||| Sbjct: 92057 acctaagcctaagcctgagcctatgcctaagcctaagcctaagcc 92013
>emb|Z81147.1|CET09E11 Caenorhabditis elegans Cosmid T09E11, complete sequence Length = 33746 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 304 gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagc 353 ||||||||||||||| | ||| |||| ||||| ||||||| |||||||| Sbjct: 4566 gcctaagcctgaacctaagcctaagcttgagccaaaacctaggcctaagc 4517
>gb|AF519487.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1099 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccagaac 389 |||||| ||||||||||||||||||| Sbjct: 814 gccaaaaccagagcctaagccagaac 839
>gb|AF519478.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1114 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 368 aagccagagcctaagccagaac 389 |||||||||||||||||||||| Sbjct: 857 aagccagagcctaagccagaac 878
>gb|AF519473.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1108 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424 ||||| ||||| ||||||||||||| || || ||||| | |||||| |||||||| ||| Sbjct: 818 ccaaaaccagaacctaagccagaaccaaaacctgagcctaagcctaagccagaaccaaaa 877 Query: 425 cc 426 || Sbjct: 878 cc 879
>gb|BC103403.1| Bos taurus pinin, desmosome associated protein, mRNA (cDNA clone MGC:127754 IMAGE:30957312), complete cds Length = 2388 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcctat 447 |||||||||||||||||||||| Sbjct: 1457 ctgagccccaacctgagcctat 1478
>gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, complete sequence Length = 194546 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 323 ccaaagccggagcccaaaccta 344 |||||||||||||||||||||| Sbjct: 95266 ccaaagccggagcccaaaccta 95245
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 cgcggccgctgctggccggggc 199 |||||||||||||||||||||| Sbjct: 2703001 cgcggccgctgctggccggggc 2702980
>gb|AF331853.1| Saccharum hybrid cultivar CP72-2086 proline-rich protein mRNA, partial sequence Length = 1173 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 407 cctaaaccagaaccgaaacctgagcc 432 |||||||||||||| ||||||||||| Sbjct: 149 cctaaaccagaaccaaaacctgagcc 174 Score = 40.1 bits (20), Expect = 6.0 Identities = 65/80 (81%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424 ||||| |||||||||||||| || | |||||| || || | ||| ||||| |||||| Sbjct: 197 ccaaaaccagagcctaagcctgagcccaagccagaaccaaaacctgaaccactgccgaaa 256 Query: 425 cctgagccccaacctgagcc 444 || ||||| ||||||||||| Sbjct: 257 ccagagcctcaacctgagcc 276
>gb|AF331852.1| Saccharum hybrid cultivar CP72-2086 proline-rich protein (SPRP2) mRNA, partial cds Length = 590 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 407 cctaaaccagaaccgaaacctgagcc 432 |||||||||||||| ||||||||||| Sbjct: 442 cctaaaccagaaccaaaacctgagcc 467
>gb|AF331851.1| Saccharum hybrid cultivar CP65-357 proline-rich protein (PRP) gene, partial cds Length = 2548 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 407 cctaaaccagaaccgaaacctgagcc 432 |||||||||||||| ||||||||||| Sbjct: 2206 cctaaaccagaaccaaaacctgagcc 2231 Score = 40.1 bits (20), Expect = 6.0 Identities = 65/80 (81%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagccagaactcaagcccgagccgatgcctaaaccagaaccgaaa 424 ||||| |||||||||||||| || | |||||| || || | ||| ||||| |||||| Sbjct: 2248 ccaaaaccagagcctaagcctgagcccaagccagaaccaaaacctgaaccactgccgaaa 2307 Query: 425 cctgagccccaacctgagcc 444 || ||||| ||||||||||| Sbjct: 2308 ccagagcctcaacctgagcc 2327
>gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, complete sequence Length = 220807 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 323 ccaaagccggagcccaaaccta 344 |||||||||||||||||||||| Sbjct: 19522 ccaaagccggagcccaaaccta 19543
>ref|NM_174718.1| Bos taurus pinin, desmosome associated protein (PNN), mRNA Length = 4149 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcctat 447 |||||||||||||||||||||| Sbjct: 3137 ctgagccccaacctgagcctat 3158
>emb|AL132943.3|CEY116F11B Caenorhabditis elegans YAC Y116F11B, complete sequence Length = 105778 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Plus Query: 339 aacctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384 |||||| |||||||||||| || | ||| ||||| ||||||||||| Sbjct: 29323 aacctaagcctaagcctgatcctaagcctaagcctgagcctaagcc 29368
>emb|AL032623.1|CEY43F8B Caenorhabditis elegans YAC Y43F8B, complete sequence Length = 101679 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 gcccaaacctatgcctaagcct 355 |||||||||||||||||||||| Sbjct: 61020 gcccaaacctatgcctaagcct 60999
>gb|U77717.1|BTU77717 Bos taurus desmosome associated protein pinin mRNA, complete cds Length = 4167 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcctat 447 |||||||||||||||||||||| Sbjct: 3155 ctgagccccaacctgagcctat 3176
>gb|AY623109.1| Homo sapiens TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa (TAF1) gene, complete cds Length = 100711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ccccgagccggagcccaagcc 234 ||||||||||||||||||||| Sbjct: 56552 ccccgagccggagcccaagcc 56532
>emb|Z81502.1|CEF14B6 Caenorhabditis elegans Cosmid F14B6, complete sequence Length = 29283 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 299 cctatgcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaa 351 ||||||||||||||| | |||| ||| |||| ||||||| ||||||||||| Sbjct: 7996 cctatgcctaagcctaagcccaagcccaagcgcaagcccaagcctatgcctaa 8048 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 agcccaagcctatgcctaaa 268 |||||||||||||||||||| Sbjct: 8030 agcccaagcctatgcctaaa 8049
>ref|XM_764013.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_542_3431_1206) partial mRNA Length = 2226 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 423 aacctgagccccaacctgagcctat 447 ||||||||||| ||||||||||||| Sbjct: 1778 aacctgagcccgaacctgagcctat 1802
>gb|AF040648.2| Caenorhabditis elegans fosmid H19M22, complete sequence Length = 44699 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 307 taagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355 |||||||||||| | ||| ||||| |||| ||||||| |||||||||| Sbjct: 5521 taagcctgaacctaagcctaagcctaagcctaaacctaagcctaagcct 5569
>gb|AF025452.3| Caenorhabditis elegans cosmid B0454, complete sequence Length = 44397 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 gagcccaagcctatgcctaaacctgaacc 276 ||||| ||||||| ||||||||||||||| Sbjct: 17685 gagcctaagcctaagcctaaacctgaacc 17713 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 341 cctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384 |||| ||||||||||||||| | ||| ||||| |||||||||| Sbjct: 25453 cctaagcctaagcctgaaccaaagcctaagcctaagcctaagcc 25496
>gb|BC098513.1| Rattus norvegicus cDNA clone IMAGE:7124518, **** WARNING: chimeric clone **** Length = 6234 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 cctgagccccaacctgagcct 445 ||||||||||||||||||||| Sbjct: 5043 cctgagccccaacctgagcct 5063
>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence Length = 143786 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 agcccaagcctatgcctaaacctgaaccc 277 |||| ||||||||| |||||||||||||| Sbjct: 64140 agcctaagcctatggctaaacctgaaccc 64168
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gccgctgctggccggggcctc 202 ||||||||||||||||||||| Sbjct: 2780694 gccgctgctggccggggcctc 2780674
>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14, complete sequence Length = 151836 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 cctgagccccaacctgagcct 445 ||||||||||||||||||||| Sbjct: 119908 cctgagccccaacctgagcct 119928
>ref|XM_347237.2| PREDICTED: Rattus norvegicus similar to pinin (LOC368070), mRNA Length = 3407 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 cctgagccccaacctgagcct 445 ||||||||||||||||||||| Sbjct: 1411 cctgagccccaacctgagcct 1431
>gb|AF098994.1| Caenorhabditis elegans cosmid T06A4, complete sequence Length = 32053 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 agcccaagcctatgcctaaacctga 273 ||||||||||||||||||| ||||| Sbjct: 24832 agcccaagcctatgcctaagcctga 24808 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 agcccaaacctatgcctaagcctga 357 ||||||| ||||||||||||||||| Sbjct: 24832 agcccaagcctatgcctaagcctga 24808 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 280 gccgaagccggagcccacacctatgcctaagcctga 315 ||||||||| |||||| ||||||||||||||||| Sbjct: 24843 gccgaagcctaagcccaagcctatgcctaagcctga 24808
>emb|Y08772.1|HSPABII Homo sapiens PABII pseudogene Length = 1930 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ccccgagccggagcccaagcc 234 ||||||||||||||||||||| Sbjct: 312 ccccgagccggagcccaagcc 332
>emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6 PACs 1 BAC and 1 cosmid, region GJB1-DXS559 map Xq13.1; segment 1/2, complete sequence Length = 305000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ccccgagccggagcccaagcc 234 ||||||||||||||||||||| Sbjct: 262387 ccccgagccggagcccaagcc 262367
>gb|AF022969.1| Caenorhabditis elegans cosmid C29G2, complete sequence Length = 19194 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 326 aagccggagcccaaacctatgcctaagcctga 357 ||||||||||| || |||| |||||||||||| Sbjct: 12809 aagccggagcctaagcctaagcctaagcctga 12840
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 gagaagctccccgagccggagccc 229 ||||||| |||||||||||||||| Sbjct: 1640851 gagaagccccccgagccggagccc 1640874
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 agcacaagtgcagcaacagc 97 |||||||||||||||||||| Sbjct: 906400 agcacaagtgcagcaacagc 906381
>gb|AE017130.1| Yersinia pestis biovar Medievalis str. 91001 section 4 of 16 of the complete genome Length = 290510 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ctccggcttcagcctcgcgg 182 |||||||||||||||||||| Sbjct: 280534 ctccggcttcagcctcgcgg 280515
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gtgctcctcgtcgggctgctcgcg 160 |||||||||||||||| ||||||| Sbjct: 622491 gtgctcctcgtcgggcagctcgcg 622468
>gb|AF045637.2| Caenorhabditis elegans cosmid C44C11, complete sequence Length = 11710 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 304 gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355 ||||||||||||||| |||| || || ||||| || |||| |||||||||| Sbjct: 333 gcctaagcctgaacctatgcttaaacctgagcctaagcctaagcctaagcct 282
>ref|XM_359498.1| Magnaporthe grisea 70-15 predicted protein (MG05279.4) partial mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ccccgagccggagcccaagc 233 |||||||||||||||||||| Sbjct: 528 ccccgagccggagcccaagc 547
>ref|NM_002687.2| Homo sapiens pinin, desmosome associated protein (PNN), mRNA Length = 2598 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1481 ctgagccccaacctgagcct 1500
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 322 gccaaagccggagcccaaacctatgcctaagcctga 357 ||||||||| || || ||||||| |||||||||||| Sbjct: 83022 gccaaagcctgaaccgaaacctaagcctaagcctga 82987 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccaaagccggagcccaaacc 342 |||||||||||||||||||| Sbjct: 58499 ccaaagccggagcccaaacc 58480
>gb|AY659008.1| Synthetic construct Peudomonas aeruginosa clone FLH042650.01F PA1407 gene, partial cds Length = 942 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tcgcggccgctgctggccgg 196 |||||||||||||||||||| Sbjct: 90 tcgcggccgctgctggccgg 109
>gb|AE002104.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 5 of 59 of the complete genome Length = 21206 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 taaaccagaaccgaaacctgagcc 432 |||||||||||| ||||||||||| Sbjct: 3006 taaaccagaaccaaaacctgagcc 3029
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 gtgctcctcgtcgggctgctcgcg 160 |||||||||||||||| ||||||| Sbjct: 3152913 gtgctcctcgtcgggcagctcgcg 3152936
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctccggcttcagcctcgcgg 182 |||||||||||||||||||| Sbjct: 1364613 ctccggcttcagcctcgcgg 1364632
>gb|AF043706.4| Caenorhabditis elegans cosmid ZC123, complete sequence Length = 44292 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 326 aagccggagcccaaacctatgcctaagcctga 357 ||||| ||||| ||||||| |||||||||||| Sbjct: 30865 aagcctgagcctaaacctaagcctaagcctga 30834 Score = 40.1 bits (20), Expect = 6.0 Identities = 59/72 (81%) Strand = Plus / Minus Query: 284 aagccggagcccacacctatgcctaagcctgaacccatgccaaagccggagcccaaacct 343 ||||| ||||| | ||||| |||||||||||| | ||| ||||| ||||||||||| Sbjct: 30865 aagcctgagcctaaacctaagcctaagcctgaggttaagcctaagcctaagcccaaacct 30806 Query: 344 atgcctaagcct 355 | |||||||||| Sbjct: 30805 aagcctaagcct 30794 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 326 aagccggagcccaaacctatgcctaagcctga 357 ||||| ||||| ||||||| |||||||||||| Sbjct: 30409 aagcctgagcctaaacctaagcctaagcctga 30378 Score = 40.1 bits (20), Expect = 6.0 Identities = 59/72 (81%) Strand = Plus / Minus Query: 284 aagccggagcccacacctatgcctaagcctgaacccatgccaaagccggagcccaaacct 343 ||||| ||||| | ||||| |||||||||||| | ||| ||||| ||||||||||| Sbjct: 30409 aagcctgagcctaaacctaagcctaagcctgaggttaagcctaagcctaagcccaaacct 30350 Query: 344 atgcctaagcct 355 | |||||||||| Sbjct: 30349 aagcctaagcct 30338
>ref|XM_843078.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0476) partial mRNA Length = 5088 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 agcacaagtgcagcaacagc 97 |||||||||||||||||||| Sbjct: 2051 agcacaagtgcagcaacagc 2070
>emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, complete sequence Length = 122592 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 gagcccaagcctatgcctaaacct 271 ||||| |||||||||||||||||| Sbjct: 75338 gagcctaagcctatgcctaaacct 75361
>emb|AL110501.1|CEY79H2A Caenorhabditis elegans YAC Y79H2A, complete sequence Length = 66144 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 341 cctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384 ||||||||||||||| |||| | ||| ||||| |||||||||| Sbjct: 12436 cctatgcctaagcctaaacctaagcccaagcctaagcctaagcc 12479
>gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, complete sequence Length = 138102 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ccaaagccagagcctaagcc 384 |||||||||||||||||||| Sbjct: 13553 ccaaagccagagcctaagcc 13534
>gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, complete sequence Length = 243114 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ccaaagccagagcctaagcc 384 |||||||||||||||||||| Sbjct: 185157 ccaaagccagagcctaagcc 185138
>emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 in linkage group 9, complete sequence Length = 214459 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 365 ccaaagccagagcctaagccagaactcaagcc 396 |||||||||||||| ||||| ||||| ||||| Sbjct: 209430 ccaaagccagagccaaagcctgaacttaagcc 209399
>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3' end of the PRKCZ gene for protein kinase C zeta, a novel gene, a novel gene (FLJ31031), the SKI gene for v-ski sarcoma viral oncogene homolog (avian) and five CpG islands, complete sequence Length = 179836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aacagctgcgagaaagcagc 111 |||||||||||||||||||| Sbjct: 130851 aacagctgcgagaaagcagc 130832
>emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in linkage group 23, complete sequence Length = 220945 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tgcctaaaccagaaccgaaacctg 428 |||||||||||||||| ||||||| Sbjct: 95546 tgcctaaaccagaaccaaaacctg 95569
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctccggcttcagcctcgcgg 182 |||||||||||||||||||| Sbjct: 1356735 ctccggcttcagcctcgcgg 1356754
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 gtgctcctcgtcgggctgctcgcg 160 |||||||||||||||| ||||||| Sbjct: 2882854 gtgctcctcgtcgggcagctcgcg 2882877
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 371 ccagagcctaagccagaactcaagcccgagcc 402 |||||||| ||||| |||| |||||||||||| Sbjct: 222983 ccagagcccaagccggaacccaagcccgagcc 223014
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gctcctcgtcgggctgctcgcggc 162 |||||| ||||||||||||||||| Sbjct: 248933 gctcctggtcgggctgctcgcggc 248910
>emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; segment 13/20 Length = 258050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctccggcttcagcctcgcgg 182 |||||||||||||||||||| Sbjct: 55324 ctccggcttcagcctcgcgg 55343
>emb|CR615582.1| full-length cDNA clone CS0DA003YN20 of Neuroblastoma of Homo sapiens (human) Length = 1595 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1419 ctgagccccaacctgagcct 1438
>gb|AF003148.2| Caenorhabditis elegans cosmid F32B5, complete sequence Length = 38138 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 349 taagcctgaacccatgccaaagccagagcctaagcc 384 |||||||||||| | ||||||||| |||||||||| Sbjct: 9567 taagcctgaacctaagccaaagcctaagcctaagcc 9532
>emb|CR622090.1| full-length cDNA clone CS0DF038YF23 of Fetal brain of Homo sapiens (human) Length = 1977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 878 ctgagccccaacctgagcct 897
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 413 ccagaaccgaaacctgagccccaacctgagcc 444 ||||||||| |||| ||||| ||||||||||| Sbjct: 4501124 ccagaaccgcaaccagagccacaacctgagcc 4501155
>ref|XM_686048.1| PREDICTED: Danio rerio similar to junctophilin type 2 (LOC562673), mRNA Length = 2229 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tgcctaaaccagaaccgaaacctg 428 |||||||||||||||| ||||||| Sbjct: 1073 tgcctaaaccagaaccaaaacctg 1096
>ref|XM_703822.1| PREDICTED: Danio rerio similar to junctophilin 2, transcript variant 2 (LOC562494), mRNA Length = 3252 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tgcctaaaccagaaccgaaacctg 428 |||||||||||||||| ||||||| Sbjct: 2096 tgcctaaaccagaaccaaaacctg 2119
>ref|XM_682740.1| PREDICTED: Danio rerio similar to junctophilin 2, transcript variant 1 (LOC562494), mRNA Length = 3282 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tgcctaaaccagaaccgaaacctg 428 |||||||||||||||| ||||||| Sbjct: 2126 tgcctaaaccagaaccaaaacctg 2149
>ref|XM_678616.1| PREDICTED: Danio rerio similar to titin isoform N2-B (LOC555953), mRNA Length = 18297 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagccagaactcaagcc 396 |||||||||||||| ||||| ||||| ||||| Sbjct: 15772 ccaaagccagagccaaagcctgaacttaagcc 15803
>gb|AC087794.1| Caenorhabditis elegans cosmid Y32G9A, complete sequence Length = 48110 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 gagcccaaacctatgcctaagcct 355 ||||||||||||| |||||||||| Sbjct: 31775 gagcccaaacctaagcctaagcct 31752
>gb|AY224438.1| Oryza sativa (japonica cultivar-group) isolate 23221 proline-rich protein mRNA, complete cds Length = 1251 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 322 gccaaagccggagcccaaacctatgcctaagcctga 357 ||||||||| || || ||||||| |||||||||||| Sbjct: 1149 gccaaagcctgaaccgaaacctaagcctaagcctga 1184
>gb|AC006620.1|AC006620 Caenorhabditis elegans cosmid C51G7, complete sequence Length = 44031 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 cctatgcctaagcctgaacccatgccaaagccagagcctaagcc 384 ||||||||||||||| |||| | ||| ||||| |||||||||| Sbjct: 23255 cctatgcctaagcctaaacctaagcccaagcctaagcctaagcc 23212
>gb|AF130351.2|AF130351 Homo sapiens chromosome 21 clone PAC 190N10 map 21q11.2, complete sequence Length = 102043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cacatccactttatctatcc 47 |||||||||||||||||||| Sbjct: 54326 cacatccactttatctatcc 54345
>dbj|AK028219.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810021K19 product:pinin, full insert sequence Length = 3259 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1432 ctgagccccaacctgagcct 1451
>gb|BC091782.1| Danio rerio JPH2 protein, mRNA (cDNA clone IMAGE:7137591), partial cds Length = 2465 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tgcctaaaccagaaccgaaacctg 428 |||||||||||||||| ||||||| Sbjct: 1797 tgcctaaaccagaaccaaaacctg 1820
>gb|AF040652.2| Caenorhabditis elegans cosmid T05A8, complete sequence Length = 33896 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 agcccaaacctatgcctaagcctgaacccatgccaaagcc 372 |||||||||||| |||||||||| | || ||||| ||||| Sbjct: 22503 agcccaaacctaggcctaagcctaagcctatgcctaagcc 22542
>gb|AF016669.1| Caenorhabditis elegans cosmid K10G6, complete sequence Length = 33588 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 agcccaagcctatgcctaaacctgaacc 276 |||| ||||||| ||||||||||||||| Sbjct: 20701 agcctaagcctaagcctaaacctgaacc 20674
>emb|CR377872.1| Pinus pinaster SSR, clone PPB3A06r Length = 536 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccaga 387 ||||||||||||||| |||||||| Sbjct: 302 gccaaagccagagccaaagccaga 325
>emb|CR377871.1| Pinus pinaster SSR, clone PPB3A06 Length = 582 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 gccaaagccagagcctaagccaga 387 ||||||||||||||| |||||||| Sbjct: 294 gccaaagccagagccaaagccaga 271
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 322 gccaaagccggagcccaaacctatgcctaagcctga 357 ||||||||| || || ||||||| |||||||||||| Sbjct: 7646627 gccaaagcctgaaccgaaacctaagcctaagcctga 7646592 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccaaagccggagcccaaacc 342 |||||||||||||||||||| Sbjct: 7622104 ccaaagccggagcccaaacc 7622085
>gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone BACR13H19, complete sequence Length = 155666 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 gccaaagccagagcctaagccaga 387 ||||||||||||||| |||||||| Sbjct: 143606 gccaaagccagagccaaagccaga 143583
>gb|AC007947.5|AC007947 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone BACR11O03, complete sequence Length = 168505 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 gccaaagccagagcctaagccaga 387 ||||||||||||||| |||||||| Sbjct: 28671 gccaaagccagagccaaagccaga 28648
>gb|AC154309.1| Mus musculus BAC clone RP23-370I7 from chromosome 16, complete sequence Length = 178958 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cacaccacatccactttatc 42 |||||||||||||||||||| Sbjct: 100851 cacaccacatccactttatc 100870
>dbj|AK223612.1| Homo sapiens mRNA for pinin, desmosome associated protein variant, clone: FCC133C12 Length = 2533 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1429 ctgagccccaacctgagcct 1448
>gb|AF195139.1|AF195139 Homo sapiens pinin (PNN) gene, complete cds Length = 11787 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 9100 ctgagccccaacctgagcct 9119
>gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 of the complete genome Length = 11398 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tcgcggccgctgctggccgg 196 |||||||||||||||||||| Sbjct: 4115 tcgcggccgctgctggccgg 4096
>emb|BX248228.3| Zebrafish DNA sequence from clone RP71-40J23 in linkage group 23, complete sequence Length = 141134 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tgcctaaaccagaaccgaaacctg 428 |||||||||||||||| ||||||| Sbjct: 94127 tgcctaaaccagaaccaaaacctg 94150
>emb|AL954299.13| Mouse DNA sequence from clone RP23-399D3 on chromosome 2, complete sequence Length = 142229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cagaggaaccacacaccaca 31 |||||||||||||||||||| Sbjct: 26146 cagaggaaccacacaccaca 26127
>dbj|BS000011.1| Pan troglodytes chromosome 22 clone:RP43-017I17, map 22, complete sequences Length = 191345 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cacatccactttatctatcc 47 |||||||||||||||||||| Sbjct: 43775 cacatccactttatctatcc 43794
>emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein Length = 1648 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccaga 387 |||||||||||| ||||||||||| Sbjct: 506 gccaaagccagaacctaagccaga 529
>dbj|AK100217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045I16, full insert sequence Length = 1510 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ccaaagccggagcccaaacc 342 |||||||||||||||||||| Sbjct: 680 ccaaagccggagcccaaacc 699
>gb|AF112222.1|AF112222 Homo sapiens nuclear protein SDK3 mRNA, complete cds Length = 3122 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1477 ctgagccccaacctgagcct 1496
>emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007 Length = 340000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cacatccactttatctatcc 47 |||||||||||||||||||| Sbjct: 19460 cacatccactttatctatcc 19479
>gb|BC062602.1| Homo sapiens pinin, desmosome associated protein, mRNA (cDNA clone MGC:70809 IMAGE:5491466), complete cds Length = 2427 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1405 ctgagccccaacctgagcct 1424
>emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, complete sequence Length = 277607 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 agcccaaacctatgcctaagcctgaacccatgccaaagcc 372 |||| |||||| ||||||||||||||| ||||| ||||| Sbjct: 38574 agcctaaacctgagcctaagcctgaacctatgcctaagcc 38613
>gb|AF098988.4| Caenorhabditis elegans cosmid C50E10, complete sequence Length = 43461 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 304 gcctaagcctgaacccatgccaaagccggagcccaaacctatgcctaagcct 355 ||||||||||||||| |||| || || ||||| || |||| |||||||||| Sbjct: 42994 gcctaagcctgaacctatgcttaaacctgagcctaagcctaagcctaagcct 42943
>gb|AF337054.1| Oryza sativa repetitive proline rich protein mRNA, complete cds Length = 1493 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ccaaagccggagcccaaacc 342 |||||||||||||||||||| Sbjct: 649 ccaaagccggagcccaaacc 668
>emb|AL732421.9| Zebrafish DNA sequence from clone BUSM1-249N21 in linkage group 9, complete sequence Length = 90803 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagccagaactcaagcc 396 |||||||||||||| ||||| ||||| ||||| Sbjct: 58228 ccaaagccagagccaaagcctgaacttaagcc 58259
>gb|AY109604.1| Zea mays CL1298_1 mRNA sequence Length = 1739 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 gccaaagccagagcctaagccaga 387 |||||||||||| ||||||||||| Sbjct: 506 gccaaagccagaacctaagccaga 529
>gb|AY109530.1| Zea mays CL1228_1 mRNA sequence Length = 1471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ccaaagccagagcctaagcc 384 |||||||||||||||||||| Sbjct: 1054 ccaaagccagagcctaagcc 1073
>emb|AL032637.1|CEY43F8C Caenorhabditis elegans YAC Y43F8C, complete sequence Length = 120492 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 gagcccaagcctatgcctaaacct 271 ||||| |||||||||||||||||| Sbjct: 67824 gagcctaagcctatgcctaaacct 67847
>emb|Z46996.1|CEC34C12 Caenorhabditis elegans Cosmid C34C12, complete sequence Length = 34759 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 320 atgccaaagccggagcccaaacctatgcctaagcct 355 |||||||||||| |||| |||| || |||||||||| Sbjct: 25426 atgccaaagccgaagcctaaacttaagcctaagcct 25461
>emb|AL139020.5|CNS01DX2 Human chromosome 14 DNA sequence BAC R-164H13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166308 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cgctgctggccggggcctcg 203 |||||||||||||||||||| Sbjct: 51015 cgctgctggccggggcctcg 50996
>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete sequence Length = 231562 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 gccaaagccagagcctaagccaga 387 ||||||||||||||| |||||||| Sbjct: 190876 gccaaagccagagccaaagccaga 190853
>emb|AL132639.4|CNS01DT4 Human chromosome 14 DNA sequence BAC R-407N17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196319 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 23936 ctgagccccaacctgagcct 23955
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcggccgctgctggccgggg 198 |||||||||||||||||||| Sbjct: 3802023 gcggccgctgctggccgggg 3802004
>gb|AC024796.1| Caenorhabditis elegans cosmid Y48G1C, complete sequence Length = 60391 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aagcctatgcctaaacctga 273 |||||||||||||||||||| Sbjct: 9647 aagcctatgcctaaacctga 9666
>gb|U77718.1|HSU77718 Human desmosome associated protein pinin mRNA, complete cds Length = 2617 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1424 ctgagccccaacctgagcct 1443
>emb|X82241.1|HSTCL1SP1 H.sapiens TCL1 gene Length = 560 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cgctgctggccggggcctcg 203 |||||||||||||||||||| Sbjct: 137 cgctgctggccggggcctcg 156
>emb|Y10351.1|HSSDK3 H.sapiens mRNA for nuclear protein SDK3, partial Length = 2956 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1381 ctgagccccaacctgagcct 1400
>emb|Y09703.1|HSMEMA H.sapiens mRNA for MEMA protein Length = 3278 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctgagccccaacctgagcct 445 |||||||||||||||||||| Sbjct: 1404 ctgagccccaacctgagcct 1423 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,016,307 Number of Sequences: 3902068 Number of extensions: 3016307 Number of successful extensions: 60829 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59542 Number of HSP's gapped (non-prelim): 1253 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)