ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet27e12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 771 bits (389), Expect = 0.0 Identities = 395/397 (99%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 617 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 677 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 737 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 797 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 857 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 917 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatcgtc 397 |||||||||| ||||||||||||||||||||||||| Sbjct: 918 gtacaacaagagggagaacccccgtgtgcccatcgtc 954
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 771 bits (389), Expect = 0.0 Identities = 395/397 (99%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 362 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 422 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 482 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 542 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 602 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 662 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatcgtc 397 |||||||||| ||||||||||||||||||||||||| Sbjct: 663 gtacaacaagagggagaacccccgtgtgcccatcgtc 699
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 692 bits (349), Expect = 0.0 Identities = 385/397 (96%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 537 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 538 aggaaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgat 597 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 598 gagtgccggagagctggagagtggcaacgccggagagccagccaagctcatcaggcagcg 657 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 717 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 718 tcttgacgccggtgcgggtaggatgggcgggaccacacagtacaccgtcaacaaccagat 777 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 778 ggtgaacgccaccctcatgaacatcgccgatgcccccaccaatgtgcagctcccaggcat 837 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatcgtc 397 ||||||||||||||||||||| ||||||||||||||| Sbjct: 838 gtacaacaaggaggagaacccacgtgtgcccatcgtc 874
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 583 bits (294), Expect = e-163 Identities = 369/394 (93%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 489 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggtca 548 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 549 ggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgat 608 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 609 gagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcagcg 668 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 669 gtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacga 728 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 || ||||| || |||||| |||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 729 cctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaaccagat 788 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| || |||||||||||||||||||| || || Sbjct: 789 ggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagctcccggggat 848 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||||||||||||||| |||||| Sbjct: 849 gtacaacaaggaggagaacccccgtgtccccatc 882
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 573 bits (289), Expect = e-160 Identities = 367/393 (93%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 499 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggtca 558 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 559 ggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgat 618 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 619 gagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcagcg 678 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 679 gtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacga 738 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 || ||||| || |||||| |||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 739 cctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaaccagat 798 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| || || || Sbjct: 799 ggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagcttccggggat 858 Query: 361 gtacaacaaggaggagaacccccgtgtgcccat 393 ||||||||||||||||||||||||||| ||||| Sbjct: 859 gtacaacaaggaggagaacccccgtgttcccat 891
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 557 bits (281), Expect = e-156 Identities = 287/289 (99%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 6587 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6588 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 6647 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 397 |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6648 gctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtc 6696 Score = 412 bits (208), Expect = e-112 Identities = 348/394 (88%), Gaps = 3/394 (0%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||| || |||||||||||| | || |||||| |||||||||||||||||||||| || Sbjct: 3176 catgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggaca 3235 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3236 gggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgat 3295 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||| ||||||||||| || |||| | ||||| |||||||| ||| ||||| | Sbjct: 3296 gagcgccggtgagctggagagcggcaacg---gcgagccggccaagctgatccggcagag 3352 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 3353 gtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacga 3412 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 || ||||| || ||||| |||||||||| || ||||||||||| || ||||||||||| Sbjct: 3413 cctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaacaaccagat 3472 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 ||||||||||||||||||||||||||| || || |||||||||||||||||||| || || Sbjct: 3473 ggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctcccggggat 3532 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 |||||||||||||||||||||||| ||||||||| Sbjct: 3533 gtacaacaaggaggagaacccccgcgtgcccatc 3566 Score = 174 bits (88), Expect = 1e-40 Identities = 88/88 (100%) Strand = Plus / Plus Query: 21 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129 Query: 81 agcttgtgttcgccaagatgggcatcaa 108 |||||||||||||||||||||||||||| Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaag 22 |||||||||||||||||||||| Sbjct: 5899 catgaccctgcccaacatcaag 5920
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 504 bits (254), Expect = e-139 Identities = 359/394 (91%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 482 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 541 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 542 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 601 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 602 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 661 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 662 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 721 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 722 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 781 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 782 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccctgggat 841 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 842 gtacaacaaggaggacaacccccgtgtccccatc 875
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 496 bits (250), Expect = e-137 Identities = 358/394 (90%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 446 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 505 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 506 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 565 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 566 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 625 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 626 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 685 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 686 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 745 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 746 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 805 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 806 gtacaacaaggaggacaacccccgtgtccccatc 839
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 496 bits (250), Expect = e-137 Identities = 358/394 (90%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 445 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 504 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 505 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 564 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 565 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 624 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 625 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 684 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 685 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 744 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 745 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 804 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 805 gtacaacaaggaggacaacccccgtgtccccatc 838
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 496 bits (250), Expect = e-137 Identities = 358/394 (90%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 483 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 542 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 543 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 602 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 603 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 662 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 663 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 722 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 723 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 782 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 783 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 842 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 843 gtacaacaaggaggacaacccccgtgtccccatc 876
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 496 bits (250), Expect = e-137 Identities = 358/394 (90%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 266 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 325 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 326 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 385 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 386 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 445 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 446 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 505 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 506 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 565 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 566 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 625 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 626 gtacaacaaggaggacaacccccgtgtccccatc 659
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 496 bits (250), Expect = e-137 Identities = 358/394 (90%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 487 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 546 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 547 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 606 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 607 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 666 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 667 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 726 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 727 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 786 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 787 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 846 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 847 gtacaacaaggaggacaacccccgtgtccccatc 880
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 496 bits (250), Expect = e-137 Identities = 358/394 (90%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 481 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 540 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 541 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 600 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 601 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 660 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 661 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 720 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 721 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 780 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 781 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 840 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 841 gtacaacaaggaggacaacccccgtgtccccatc 874
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 488 bits (246), Expect = e-135 Identities = 357/394 (90%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 494 catgaccctccccaacatcaaggtcccactcaccctgggtatctggggaggcaagggtca 553 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 554 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 613 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 614 gagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcg 673 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 674 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 733 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 734 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 793 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 794 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 853 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 854 gtacaacaaggaggacaacccccgtgtccccatc 887
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 484 bits (244), Expect = e-133 Identities = 357/394 (90%), Gaps = 3/394 (0%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 454 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 513 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 514 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgat 573 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || |||| ||||||| |||||||| ||||||||||| Sbjct: 574 gagcgccggagagctggagagcggcaacg---gagagccggccaagctgatcaggcagcg 630 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 631 gtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacga 690 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||||| Sbjct: 691 tctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagat 750 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 751 ggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggat 810 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| ||||||||||| |||||| Sbjct: 811 gtacaacaaggaggacaacccccgtgtccccatc 844
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 448 bits (226), Expect = e-123 Identities = 346/386 (89%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||||| || ||||| |||||||||||||||||||| |||||||| |||| Sbjct: 449 tgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaagggaaat 508 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 509 ccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgccg 568 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 | ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||| Sbjct: 569 gtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtg 628 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 |||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || | Sbjct: 629 aggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatg 688 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | ||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 689 ccggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacg 748 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 ||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 749 ccaccctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaaca 808 Query: 369 aggaggagaacccccgtgtgcccatc 394 || | ||||||||||| ||||||||| Sbjct: 809 agcaagagaacccccgcgtgcccatc 834
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 448 bits (226), Expect = e-123 Identities = 346/386 (89%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||||| || ||||| |||||||||||||||||||| |||||||| |||| Sbjct: 312 tgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaagggaaat 371 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 372 ccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgccg 431 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 | ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||| Sbjct: 432 gtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtg 491 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 |||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || | Sbjct: 492 aggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatg 551 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | ||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 552 ccggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacg 611 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 ||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 612 ccaccctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaaca 671 Query: 369 aggaggagaacccccgtgtgcccatc 394 || | ||||||||||| ||||||||| Sbjct: 672 agcaagagaacccccgcgtgcccatc 697
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 448 bits (226), Expect = e-123 Identities = 346/386 (89%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || |||| Sbjct: 148 tgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaat 207 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 208 ccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgccg 267 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 | ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||| Sbjct: 268 gtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtg 327 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 |||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || | Sbjct: 328 aggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatg 387 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | ||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 388 ccggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacg 447 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 ||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 448 ccaccctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaaca 507 Query: 369 aggaggagaacccccgtgtgcccatc 394 || ||||||||||||| ||||||||| Sbjct: 508 agcaggagaacccccgcgtgcccatc 533
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 448 bits (226), Expect = e-123 Identities = 346/386 (89%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || |||| Sbjct: 342 tgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaat 401 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 402 ccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgccg 461 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 | ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||| Sbjct: 462 gtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtg 521 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 |||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || | Sbjct: 522 aggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatg 581 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | ||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 582 ccggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacg 641 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 ||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 642 ccaccctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaaca 701 Query: 369 aggaggagaacccccgtgtgcccatc 394 || ||||||||||||| ||||||||| Sbjct: 702 agcaggagaacccccgcgtgcccatc 727
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 440 bits (222), Expect = e-120 Identities = 351/394 (89%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||| || |||||||||||| |||| |||||| |||||||||||||||||||||| || Sbjct: 454 catgacactccccaacatcaaggtccctctcatcctgggtatctggggaggcaagggaca 513 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 || || || |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 514 gggcaagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgat 573 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||||||||||||||| || ||||| || ||||| |||||||| ||| ||||| | Sbjct: 574 gagcgccggagagctggagagcggcaacgccggcgagccggccaagctgatccggcagag 633 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 634 gtaccgcgaggctgccgacattatcaagaagggcaagatgtgctgcctcttcatcaacga 693 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 || ||||| || ||||| |||||||||| || ||||||||||| || ||||||||||| Sbjct: 694 cctggacgccggcgcggggcggatgggcgggacgacgcagtacacggtgaacaaccagat 753 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 ||||||||||||||||||||||||||| || || ||||||||||||||| |||| || || Sbjct: 754 ggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagttcccggggat 813 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||||||||| || ||||||||| Sbjct: 814 gtacaacaaggaggagaacccacgcgtgcccatc 847
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 412 bits (208), Expect = e-112 Identities = 348/394 (88%), Gaps = 3/394 (0%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||| || |||||||||||| | || |||||| |||||||||||||||||||||| || Sbjct: 607 catgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggaca 666 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 667 gggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgat 726 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||| ||||||||||| || |||| | ||||| |||||||| ||| ||||| | Sbjct: 727 gagcgccggtgagctggagagcggcaacg---gcgagccggccaagctgatccggcagag 783 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 784 gtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacga 843 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 || ||||| || ||||| |||||||||| || ||||||||||| || ||||||||||| Sbjct: 844 cctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaacaaccagat 903 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 ||||||||||||||||||||||||||| || || |||||||||||||||||||| || || Sbjct: 904 ggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctcccggggat 963 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 |||||||||||||||||||||||| ||||||||| Sbjct: 964 gtacaacaaggaggagaacccccgcgtgcccatc 997
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 408 bits (206), Expect = e-111 Identities = 347/394 (88%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||||||||| ||||||||| | || |||||| ||||||||||||||||||| || || Sbjct: 60 catgaccctgccaaacatcaaggttcccctcatcctgggtatctggggaggcaaaggcca 119 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| ||||| || ||||| || ||||||||||||||||||| |||||||||||| Sbjct: 120 gggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcatgat 179 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct: 180 gagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcagcg 239 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 ||||||||||| | ||| | ||||||||||| ||||||| |||||||||||||||||| Sbjct: 240 ctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaacga 299 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 | ||||| || |||||| | |||||||| ||||| |||||||| || ||||||||||| Sbjct: 300 cttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagat 359 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 ||| |||||||||||||||||||||||||| ||||||||||||||||||||| || || Sbjct: 360 ggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggat 419 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| |||||||| ||||||||| Sbjct: 420 gtacaacaaggaggacaacccccgcgtgcccatc 453
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 408 bits (206), Expect = e-111 Identities = 347/394 (88%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||||||||| ||||||||| | || |||||| ||||||||||||||||||| || || Sbjct: 455 catgaccctgccaaacatcaaggttcccctcatcctgggtatctggggaggcaaaggcca 514 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| ||||| || ||||| || ||||||||||||||||||| |||||||||||| Sbjct: 515 gggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcatgat 574 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct: 575 gagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcagcg 634 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 ||||||||||| | ||| | ||||||||||| ||||||| |||||||||||||||||| Sbjct: 635 ctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaacga 694 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 | ||||| || |||||| | |||||||| ||||| |||||||| || ||||||||||| Sbjct: 695 cttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagat 754 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 ||| |||||||||||||||||||||||||| ||||||||||||||||||||| || || Sbjct: 755 ggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggat 814 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||||| |||||||| ||||||||| Sbjct: 815 gtacaacaaggaggacaacccccgcgtgcccatc 848
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 369 bits (186), Expect = 5e-99 Identities = 318/362 (87%) Strand = Plus / Plus Query: 32 atcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttc 91 ||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 361 atcttgggtatttggggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgttt 420 Query: 92 gccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgct 151 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 421 gccaagatgggtatcaaccccatcatgatgagtgccggagaactggaaagtggaaacgcc 480 Query: 152 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 211 || || ||||||||| | |||||||| |||||||||| ||||| ||||| ||||| ||| Sbjct: 481 ggtgaaccagccaagttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaag 540 Query: 212 ggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcgga 271 || || |||||| ||||||||| |||||||| || |||||||| ||| | ||||| ||| Sbjct: 541 ggcaaaatgtgcgccctcttcattaacgatctcgatgctggtgccggtcgtatgggagga 600 Query: 272 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 331 ||||| || ||||||||||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 601 accacccaatacaccgtcaacaaccagatggttaatgctaccctcatgaacatcgccgat 660 Query: 332 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 391 |||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 661 aaccccaccaacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtcccc 720 Query: 392 at 393 || Sbjct: 721 at 722
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 357 bits (180), Expect = 2e-95 Identities = 325/375 (86%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||||||||| ||||||||| | || |||||| |||||||| ||||||||| || || Sbjct: 455 catgaccctgccaaacatcaaggttcccctcatcctgggtatcgtgggaggcaaaggcca 514 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||||| ||||| || ||||| || ||||||||||||||||||| |||||||| Sbjct: 515 gggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcannnnnatcatgat 574 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 ||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct: 575 gagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcagcg 634 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 ||||||||||| | ||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 635 ctaccgtgaggcctccgacctcatcaagaagggcaagatgtgctgcctcttcatcaacga 694 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 | ||||| || |||||| | |||||||| ||||| |||||||| || ||||||||||| Sbjct: 695 cttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagat 754 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 ||| |||||||||||||||||||||||||| ||||||||||||||||||||| || || Sbjct: 755 ggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggat 814 Query: 361 gtacaacaaggagga 375 ||||||||||||||| Sbjct: 815 gtacaacaaggagga 829
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 351 bits (177), Expect = 1e-93 Identities = 327/377 (86%) Strand = Plus / Plus Query: 14 aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 73 ||||||||||| || || ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 529 aacatcaagattcctctgatcttgggtatctggggaggcaaaggtcaaggaaaatctttc 588 Query: 74 cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 133 || ||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 589 caatgtgaacttgtttttgccaagatgggaatcaaccccatcatgatgagtgctggagag 648 Query: 134 ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 193 ||||| ||||| || || ||||| || |||||||| |||||||| |||||||||| ||| Sbjct: 649 ctggaaagtggaaatgcaggagaacctgccaagctgatcaggcaaaggtaccgtgaagct 708 Query: 194 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 253 || ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 709 gctgacattatcaagaagggtaaaatgtgctgcctgttcatcaacgatctcgacgctgga 768 Query: 254 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 313 || ||| | ||||| ||||| || || ||||| || ||||||||||||||||| |||||| Sbjct: 769 gctggtcgtatgggtggaacaactcaatacactgttaacaaccagatggtgaatgccacc 828 Query: 314 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 373 || |||||||| || || ||| || || || ||||||||||| |||||||||||||| Sbjct: 829 ctcatgaacattgctgacaacccaacaaatgtccagctccctggtatgtacaacaaggaa 888 Query: 374 gagaacccccgtgtgcc 390 |||||||| |||||||| Sbjct: 889 gagaaccctcgtgtgcc 905
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 347 bits (175), Expect = 2e-92 Identities = 334/387 (86%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| || ||||| ||| | || || ||||||||||| ||||||||||| ||||| Sbjct: 516 catgacccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtca 575 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 ||||||||| ||||| ||||||||||| || ||||||||||| ||||||||||| ||||| Sbjct: 576 aggaaaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgat 635 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||||||||| |||| ||||||||||| ||||| ||||||||| | |||||||| | Sbjct: 636 gagtgccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaag 695 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||||||| || ||||| |||||||| || || ||||| |||||||| |||||||| Sbjct: 696 gtaccgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctctttatcaacga 755 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 ||| |||||||| || ||| | ||||| |||||||| || ||||| || |||||||| || Sbjct: 756 tctcgacgctggagccggtcgtatgggaggaaccacacaatacacagtgaacaaccaaat 815 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||||||||| || ||||||||||| ||| |||||||||||| |||||||| || || Sbjct: 816 ggtgaacgccacactcatgaacatcgctgataaccccaccaacgttcagctccccggtat 875 Query: 361 gtacaacaaggaggagaacccccgtgt 387 |||||||||||| |||||||| ||||| Sbjct: 876 gtacaacaaggaagagaaccctcgtgt 902
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 345 bits (174), Expect = 7e-92 Identities = 258/286 (90%) Strand = Plus / Minus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 109038 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 108979 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 108978 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgca 108919 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||||||||||||| ||||||||||| |||||| Sbjct: 108918 gctccccgggatgtacaacaaggaggacaacccccgtgtccccatc 108873 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 109351 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 109292 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaa 108 |||||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 109291 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaa 109244 Score = 109 bits (55), Expect = 7e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 265 gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 324 |||||| || ||||||||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620 Query: 325 cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 367 ||| || ||||||||||||||||||||| || ||||||||| Sbjct: 112619 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 152 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 211 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719 Query: 212 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 249 || ||||||||| || ||||||||||| || ||||| Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 71 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 108 ||||||||||| || || |||||||||||||| ||||| Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 345 bits (174), Expect = 7e-92 Identities = 258/286 (90%) Strand = Plus / Minus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 30915 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 30856 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 30855 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgca 30796 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||||||||||||| ||||||||||| |||||| Sbjct: 30795 gctccccgggatgtacaacaaggaggacaacccccgtgtccccatc 30750 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 31228 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 31169 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaa 108 |||||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 31168 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaa 31121 Score = 109 bits (55), Expect = 7e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 265 gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 324 |||||| || ||||||||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497 Query: 325 cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 367 ||| || ||||||||||||||||||||| || ||||||||| Sbjct: 34496 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 152 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 211 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596 Query: 212 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 249 || ||||||||| || ||||||||||| || ||||| Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 71 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 108 ||||||||||| || || |||||||||||||| ||||| Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 345 bits (174), Expect = 7e-92 Identities = 258/286 (90%) Strand = Plus / Minus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 28304177 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 28304118 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 28304117 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgca 28304058 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||||||||||||| ||||||||||| |||||| Sbjct: 28304057 gctccccgggatgtacaacaaggaggacaacccccgtgtccccatc 28304012 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 28304490 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 28304431 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaa 108 |||||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 28304430 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaa 28304383 Score = 109 bits (55), Expect = 7e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 265 gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 324 |||||| || ||||||||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759 Query: 325 cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 367 ||| || ||||||||||||||||||||| || ||||||||| Sbjct: 28307758 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 152 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 211 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858 Query: 212 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 249 || ||||||||| || ||||||||||| || ||||| Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 71 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 108 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 345 bits (174), Expect = 7e-92 Identities = 258/286 (90%) Strand = Plus / Minus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28286627 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 28286626 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 28286567 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 28286566 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgca 28286507 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||||||||||||| ||||||||||| |||||| Sbjct: 28286506 gctccccgggatgtacaacaaggaggacaacccccgtgtccccatc 28286461 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 28286939 catgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtca 28286880 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaa 108 |||||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 28286879 gggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaa 28286832 Score = 109 bits (55), Expect = 7e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 265 gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 324 |||||| || ||||||||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28290208 Query: 325 cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 367 ||| || ||||||||||||||||||||| || ||||||||| Sbjct: 28290207 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 152 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 211 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307 Query: 212 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 249 || ||||||||| || ||||||||||| || ||||| Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 71 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 108 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 341 bits (172), Expect = 1e-90 Identities = 337/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 623 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 682 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 683 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 742 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 743 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 802 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 803 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 862 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 863 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 922 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 923 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 982 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 983 acaacaaggaagagaacgcacgtgtccccatc 1014
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 341 bits (172), Expect = 1e-90 Identities = 337/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 623 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 682 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 683 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 742 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 743 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 802 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 803 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 862 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 863 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 922 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 923 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 982 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 983 acaacaaggaagagaacgcacgtgtccccatc 1014
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 341 bits (172), Expect = 1e-90 Identities = 337/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 652 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 711 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 712 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 771 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 772 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 831 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 832 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 891 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 892 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 951 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 952 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 1011 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 1012 acaacaaggaagagaacgcacgtgtccccatc 1043
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 341 bits (172), Expect = 1e-90 Identities = 337/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 534 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 593 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 594 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 653 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 654 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 713 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 714 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 773 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 774 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 833 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 834 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 893 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 894 acaacaaggaagagaacgcacgtgtccccatc 925
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 341 bits (172), Expect = 1e-90 Identities = 337/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 537 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 596 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 597 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 656 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 657 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 716 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 717 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 776 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 777 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 836 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 837 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 896 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 897 acaacaaggaagagaacgcacgtgtccccatc 928
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 341 bits (172), Expect = 1e-90 Identities = 337/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 534 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 593 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 594 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 653 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 654 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 713 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 714 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 773 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 774 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 833 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 834 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 893 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 894 acaacaaggaagagaacgcacgtgtccccatc 925
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 341 bits (172), Expect = 1e-90 Identities = 337/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 537 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 596 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 597 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 656 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 657 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 716 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 717 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 776 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 777 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 836 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 837 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 896 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 897 acaacaaggaagagaacgcacgtgtccccatc 928
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 339 bits (171), Expect = 4e-90 Identities = 312/359 (86%) Strand = Plus / Plus Query: 36 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 95 ||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||| |||| Sbjct: 366 tgggtatttggggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgcca 425 Query: 96 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 155 ||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || | Sbjct: 426 agatgggtatcaaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtg 485 Query: 156 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 215 | ||||||||| | |||||||| |||||||||| || || ||||| ||||| ||||| | Sbjct: 486 aaccagccaagttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggca 545 Query: 216 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 275 | |||||| | | ||||| || ||||| || |||||||| ||| | ||||| ||||||| Sbjct: 546 aaatgtgcgccttgttcattaatgatctcgatgctggtgccggtcgtatgggaggaacca 605 Query: 276 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 335 | || ||||||||||||||||||||||| ||||| ||||| ||||||||||||||| || Sbjct: 606 cccaatacaccgtcaacaaccagatggttaacgctaccctcatgaacatcgccgataacc 665 Query: 336 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 666 ccaccaacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtccccatc 724
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 333 bits (168), Expect = 3e-88 Identities = 336/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 449 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 508 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 509 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 568 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 569 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 628 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || ||| |||||||||||| Sbjct: 629 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatcaacgatc 688 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 689 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 748 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 749 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 808 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 809 acaacaaggaagagaacgcacgtgtccccatc 840
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 333 bits (168), Expect = 3e-88 Identities = 336/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 526 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 585 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 586 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 645 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 646 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 705 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 706 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 765 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct: 766 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatgg 825 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| ||||| || || |||| Sbjct: 826 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagcttccaggaatgt 885 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 886 acaacaaggaagagaacgcacgtgtccccatc 917
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 333 bits (168), Expect = 3e-88 Identities = 336/392 (85%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| ||||||| Sbjct: 652 tgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaag 711 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 | ||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||| Sbjct: 712 gtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatga 771 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||| Sbjct: 772 gtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggt 831 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 |||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||||| Sbjct: 832 accgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatc 891 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 ||||||||||||||||| | ||||| || || || |||||||| |||||||| ||||||| Sbjct: 892 ttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaatcagatgg 951 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | ||||| || || |||||||| || ||| ||| |||||||| |||||||| || |||| Sbjct: 952 ttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgt 1011 Query: 363 acaacaaggaggagaacccccgtgtgcccatc 394 |||||||||| |||||| | ||||| |||||| Sbjct: 1012 acaacaaggaagagaacgcacgtgtccccatc 1043
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 291 bits (147), Expect = 9e-76 Identities = 302/351 (86%), Gaps = 2/351 (0%) Strand = Plus / Plus Query: 45 ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 104 |||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||||| | Sbjct: 560 ggggaggcaaaggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggta 619 Query: 105 tcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga-gccagcc 163 ||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| | | || Sbjct: 620 tcaacccaatcatgatgagtgctggagagcttgagagtggaaacgcaggagaagtccgc- 678 Query: 164 aagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgc 223 ||||| ||| | ||| ||||||||||||| || ||| ||||||||||||| |||||||| Sbjct: 679 aagcttatccgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgt 738 Query: 224 tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 283 || ||||||||||||||||||||||||||||||||| | ||||| || || || |||||| Sbjct: 739 tgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtac 798 Query: 284 accgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaac 343 || ||||||||||||||||| ||||| || || |||||||| || ||| ||| |||||| Sbjct: 799 actgtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaac 858 Query: 344 gtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 || |||||||| || |||||||||||||| |||||| | ||||| |||||| Sbjct: 859 gtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatc 909
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 289 bits (146), Expect = 3e-75 Identities = 328/386 (84%), Gaps = 2/386 (0%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||| ||||||||| | || || ||||||||||| ||||||||||| |||||||| |||| Sbjct: 579 tgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaaggtaaat 638 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 639 ccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgagtgcgg 698 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 |||| |||| ||||| ||||| ||||||||||| ||| | |||||||| ||||||||| Sbjct: 699 gagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggtaccgtg 758 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgac 247 |||| |||||||| || ||||| |||||||| ||| || |||||||||||||| ||| Sbjct: 759 aggcagcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatctcgac 817 Query: 248 gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 307 || ||||| || | ||||| || ||||| || |||||||| |||||||||||||| ||| Sbjct: 818 gcgggtgctggacgtatgggaggcaccacacaatacaccgtgaacaaccagatggttaac 877 Query: 308 gccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 367 |||||||| |||||||| || || ||||||||| || || |||||||| ||||||||| Sbjct: 878 gccaccctcatgaacattgctgacaaccccaccaatgtccaactccctggtatgtacaac 937 Query: 368 aaggaggagaacccccgtgtgcccat 393 ||| | |||||| ||||||| ||||| Sbjct: 938 aagcaagagaacgcccgtgttcccat 963
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 287 bits (145), Expect = 1e-74 Identities = 322/381 (84%) Strand = Plus / Plus Query: 14 aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 73 ||||||||||| || || ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 529 aacatcaagattcctctgatcttgggtatctggggaggcaaaggtcaaggaaaatctttc 588 Query: 74 cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 133 || ||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 589 caatgtgaacttgtttttgccaagatgggaatcaaccccatcatgatgagtgctggagag 648 Query: 134 ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 193 ||||| ||||| || || |||||||| || ||||| |||||||| |||| ||||| || Sbjct: 649 ctggaaagtggaaatgcaggagagcccgcaaagctgatcaggcaaaggtatcgtgaagca 708 Query: 194 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 253 || || || ||||||||||| || ||||||||||| || ||||||||||| || || || Sbjct: 709 gctgatatcatcaagaagggaaaaatgtgctgcctgtttatcaacgatctcgatgccgga 768 Query: 254 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 313 || ||| | ||||| ||||| || || ||||| || ||||| ||||||||||| |||||| Sbjct: 769 gctggtcgtatgggtggaacaactcaatacactgttaacaatcagatggtgaatgccacc 828 Query: 314 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 373 || |||||||| || || ||| || || || ||||| |||||||||||||||||||| Sbjct: 829 ctcatgaacatagctgacaacccaacaaatgtccagcttcctggcatgtacaacaaggaa 888 Query: 374 gagaacccccgtgtgcccatc 394 |||||||| ||||| |||||| Sbjct: 889 gagaaccctcgtgttcccatc 909
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 268 bits (135), Expect = 1e-68 Identities = 332/395 (84%), Gaps = 2/395 (0%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||| |||||||||||||| | || ||||| | |||||||||||||||||||| || Sbjct: 525 catgaccttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggaca 584 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 |||||| || ||||| ||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 585 aggaaagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgat 644 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||| |||||| |||| ||||| || || ||||||||||| || | ||||||||| | Sbjct: 645 gagtgctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagag 704 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacg 239 |||||||| |||||||| ||||| ||||| |||||||| ||| || |||||||||| Sbjct: 705 ataccgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacg 763 Query: 240 atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 299 ||||||| || || || ||| | | || |||||||| || ||||| || |||||||||| Sbjct: 764 atcttgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtgaacaaccaga 823 Query: 300 tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 359 ||||||| ||||| || |||||||| || ||| ||| || || |||||||| ||||| | Sbjct: 824 tggtgaatgccactctcatgaacattgctgataaccctacaaatgtgcagcttcctggta 883 Query: 360 tgtacaacaaggaggagaacccccgtgtgcccatc 394 ||||||||||||| |||||| |||||||||||||| Sbjct: 884 tgtacaacaaggaagagaacgcccgtgtgcccatc 918
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 266 bits (134), Expect = 5e-68 Identities = 293/342 (85%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 53 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 112 ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||| || Sbjct: 1 aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60 Query: 113 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 172 |||||||||||||||||||| | || ||||| ||||||| ||||||||| ||||||||| Sbjct: 61 atcatgatgagtgccggagaattagaaagtgg-aacgctg-agagccagctaagctcatc 118 Query: 173 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 232 || ||||| ||||||||||| || || || |||||||||||||| ||||||||| | ||| Sbjct: 119 agacagcg-taccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttc 177 Query: 233 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 292 |||||||||||||| |||||||| ||||| ||||| ||||| || || ||||| |||||| Sbjct: 178 atcaacgatcttgatgctggtgcaggtagaatgggaggaactacacaatacacagtcaac 237 Query: 293 aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 352 || |||||||| || || || || |||||||| || ||| ||| ||||| || || ||| Sbjct: 238 aatcagatggttaatgctacactcatgaacattgctgataacccaaccaatgtccaactc 297 Query: 353 cctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 298 cctggaatgtacgacaaggaggagaacccccgtgtgcccatc 339
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 262 bits (132), Expect = 8e-67 Identities = 326/388 (84%), Gaps = 2/388 (0%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||||| || ||||| ||| | || |||||||||||||| ||||||||||| ||||| Sbjct: 532 catgacccttcctaacatgaaggttcctctcatcttgggtatttggggaggcaaaggtca 591 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 || || || |||||||| |||||||| || ||||||||| | |||| ||| |||||||| Sbjct: 592 gggcaagtctttccagtgcgagcttgtctttgccaagatgagaatcagccctatcatgat 651 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||||||||| |||| ||||| ||||| ||||| || || ||||| |||||||| | Sbjct: 652 gagtgccggagaattggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaag 711 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacg 239 ||||||||| || || ||||| |||| ||||||||| ||||| ||| ||||||||||||| Sbjct: 712 gtaccgtgaagcagccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacg 770 Query: 240 atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 299 ||||||| || || || ||| || | || |||||||| || ||||| ||||||||||| | Sbjct: 771 atcttgatgcaggagctggtcggcttggtggaaccacccaatacactgtcaacaaccaaa 830 Query: 300 tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 359 ||||||| |||||||| |||||||| || ||| ||| || ||||| ||||| || || | Sbjct: 831 tggtgaatgccaccctcatgaacattgctgataacccgacaaacgtccagcttccaggta 890 Query: 360 tgtacaacaaggaggagaacccccgtgt 387 |||||||||||||||||||||||||||| Sbjct: 891 tgtacaacaaggaggagaacccccgtgt 918
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 260 bits (131), Expect = 3e-66 Identities = 325/387 (83%), Gaps = 2/387 (0%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 693 tgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggtaaat 752 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||| ||||||||||||||||||||| | || || |||||||||||||||||||||| Sbjct: 753 ccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtgccg 812 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 |||| |||| ||||| || || ||||||||||| ||| | |||||||| ||||||||| Sbjct: 813 gagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtaccgtg 872 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgac 247 |||| |||||| |||| |||||||||||||| ||| || |||||||||||||| || Sbjct: 873 aggcagcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatctggaa 931 Query: 248 gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 307 | ||||| || | ||||| || ||||| || |||||||| |||||||||||||| ||| Sbjct: 932 cccggtgctggacgtatgggaggcaccacccaatacaccgtaaacaaccagatggttaac 991 Query: 308 gccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 367 ||||| || ||||||| || || ||| ||||| || || |||||||| ||||||||| Sbjct: 992 gccacactcctgaacattgctgacaacccaaccaatgtccaactccctggtatgtacaac 1051 Query: 368 aaggaggagaacccccgtgtgcccatc 394 ||| |||| || ||||||| |||||| Sbjct: 1052 aagcaggacaatgcccgtgtccccatc 1078
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 258 bits (130), Expect = 1e-65 Identities = 328/394 (83%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 ||||||| |||||||||||||| | || ||||| | ||| |||||||||||||||| || Sbjct: 521 catgaccttgcccaacatcaaggttcctctcattcttggtgtctggggaggcaagggaca 580 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 ||||||||| ||||| ||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 581 aggaaaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgat 640 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||| |||||| |||| ||||| || || ||||||||||| || | || |||||| | Sbjct: 641 gagtgctggagagttggaaagtggaaatgccggagagccagcaaaattgattaggcagag 700 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 |||||||| || ||||| | ||||||||||| |||||||| || |||||||| || Sbjct: 701 ataccgtgaagcctcagacttaatcaagaagggaaagatgtgtgttctgttcatcaatga 760 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 |||||| || || || ||| | | || |||||||| || ||||| || ||||||||||| Sbjct: 761 tcttgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtgaacaaccagat 820 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||| ||||| || |||||||| || ||| |||||| || |||||||| ||||| || Sbjct: 821 ggtgaatgccactctcatgaacattgctgataaccccacaaatgtgcagcttcctggtat 880 Query: 361 gtacaacaaggaggagaacccccgtgtgcccatc 394 |||||||||||| || ||| |||||||||||||| Sbjct: 881 gtacaacaaggaagataacgcccgtgtgcccatc 914
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 252 bits (127), Expect = 7e-64 Identities = 322/387 (83%) Strand = Plus / Plus Query: 1 catgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtca 60 |||||| || |||||||| ||| | || ||||| ||||||||||||||||| || ||||| Sbjct: 532 catgactctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtca 591 Query: 61 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 120 ||| ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 592 aggtaaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgat 651 Query: 121 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 180 |||||||||||| ||||||| || ||||| |||||||| || ||| | |||||||| || Sbjct: 652 gagtgccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacg 711 Query: 181 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 240 || |||||||| || ||||| ||||||||||| ||||||| ||||| || ||||| || Sbjct: 712 gtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcctatttatcaatga 771 Query: 241 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 300 |||||| || ||||| |||||| | || || || || || ||||| || |||||||| || Sbjct: 772 tcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgtgaacaaccaaat 831 Query: 301 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 360 |||||| || ||||| |||||||| || || || ||||| || |||||||| || || Sbjct: 832 ggtgaatgctaccctcatgaacattgctgacaatccaaccaatgttcagctcccgggtat 891 Query: 361 gtacaacaaggaggagaacccccgtgt 387 |||||||||||| ||||| || ||||| Sbjct: 892 gtacaacaaggaagagaatccacgtgt 918
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 242 bits (122), Expect = 7e-61 Identities = 242/282 (85%) Strand = Plus / Minus Query: 113 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 172 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496 Query: 173 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 232 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436 Query: 233 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 292 ||||||||||||||||||||||||||| | ||||| || || || |||||||| |||||| Sbjct: 14435 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 14376 Query: 293 aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 352 ||||||||||| ||||| || || |||||||| || ||| ||| |||||||| |||||| Sbjct: 14375 aaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctc 14316 Query: 353 cctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 || || |||||||||||||| |||||| | ||||| |||||| Sbjct: 14315 ccaggaatgtacaacaaggaagagaacgcacgtgtccccatc 14274 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 26 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 85 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674 Query: 86 gtgttcgccaagatgggcatcaa 108 || | ||||||||||| ||||| Sbjct: 14673 gtcatggccaagatgggtatcaa 14651
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 242 bits (122), Expect = 7e-61 Identities = 242/282 (85%) Strand = Plus / Plus Query: 113 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 172 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787 Query: 173 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 232 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847 Query: 233 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 292 ||||||||||||||||||||||||||| | ||||| || || || |||||||| |||||| Sbjct: 2848 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 2907 Query: 293 aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 352 ||||||||||| ||||| || || |||||||| || ||| ||| |||||||| |||||| Sbjct: 2908 aaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctc 2967 Query: 353 cctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 || || |||||||||||||| |||||| | ||||| |||||| Sbjct: 2968 ccaggaatgtacaacaaggaagagaacgcacgtgtccccatc 3009 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 26 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 85 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609 Query: 86 gtgttcgccaagatgggcatcaa 108 || | ||||||||||| ||||| Sbjct: 2610 gtcatggccaagatgggtatcaa 2632
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 240 bits (121), Expect = 3e-60 Identities = 247/289 (85%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 229 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 288 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 289 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 348 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 397 |||||| || ||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 349 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtc 397
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 240 bits (121), Expect = 3e-60 Identities = 247/289 (85%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 237 gttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacacggt 296 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 297 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 356 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 397 |||||| || ||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 357 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtc 405
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 234 bits (118), Expect = 2e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 520 tgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggcaaat 579 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 ||||||||||||| ||||| ||| |||||||| ||||||||||| ||||||||||| | Sbjct: 580 cattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagtgctg 639 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 |||| |||| ||||| || || ||||||||||||||| | || ||||| ||||| | | Sbjct: 640 gagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtacagag 699 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 | || ||||| || |||| ||||| || ||||| |||||||||||||||||||| || | Sbjct: 700 aagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatctcgatg 759 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | || || ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| | Sbjct: 760 caggagctggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatg 819 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 |||| || |||||||| || || ||| || || || |||||||| || |||||||||| Sbjct: 820 ccactctcatgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaaca 879 Query: 369 ag 370 || Sbjct: 880 ag 881
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 228 bits (115), Expect = 1e-56 Identities = 307/371 (82%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| |||| Sbjct: 490 tgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggtaaat 549 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||||||||||||||| ||| |||||||| |||||||| || ||||||||||||| Sbjct: 550 ctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagtgccg 609 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 |||| |||| ||||| || || |||||||| || || | || ||||| ||||| | | Sbjct: 610 gagaattggaaagtggaaatgcaggagagcctgcaaaattgattaggcaaaggtacagag 669 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 |||| ||||| || |||| ||| || || || || |||||||||||||||||||| || | Sbjct: 670 aggcagcagaaatcatcaggaaaggaaacatctgttgcctcttcatcaacgatctcgatg 729 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | || || ||||| ||||| ||||| || || ||||| |||||||||||||||||||| | Sbjct: 730 caggagctggtagaatgggtggaactacccaatacactgtcaacaaccagatggtgaatg 789 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 |||| || |||||||| || ||| ||| || ||||| |||||||| || |||||||||| Sbjct: 790 ccactctcatgaacattgctgataacccgacaaacgtccagctccccggtatgtacaaca 849 Query: 369 aggaggagaac 379 || | |||||| Sbjct: 850 agcaagagaac 860
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 228 bits (115), Expect = 1e-56 Identities = 307/371 (82%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||| | ||||||||||||||| | ||||||||||| |||||||| |||| Sbjct: 501 tgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaaggtaaat 560 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 ||||||| ||||||||||| ||| |||||||| ||||||||||| ||||||||||| | Sbjct: 561 cattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatgagtgctg 620 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 |||| |||| ||||| || || ||||||||||| || | || ||||| ||||| | | Sbjct: 621 gagaattggaaagtggaaatgcaggagagccagctaaattgattaggcaaaggtacagag 680 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 |||| || || || |||| ||| || || ||||| || ||||||||||||||||| || | Sbjct: 681 aggcagctgaaatcatcaggaaaggaaacatgtgttgtctcttcatcaacgatctcgatg 740 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | || || ||||| ||||| ||||| || || |||||||||||||||||||||||||| | Sbjct: 741 caggagctggtagaatgggtggaactacccaatacaccgtcaacaaccagatggtgaatg 800 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 ||||||| |||||||| || || ||| || || || |||||||| || |||||||||| Sbjct: 801 ccaccctcatgaacattgctgacaacccaacaaatgtccagctccccggtatgtacaaca 860 Query: 369 aggaggagaac 379 || | |||||| Sbjct: 861 agcaagagaac 871
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 307 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 366 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 367 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 412
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 303 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 362 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 363 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 408
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 365 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 410
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 365 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 410
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 309 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 368 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 369 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 414
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 303 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 362 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 363 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 408
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 365 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 410
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 303 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 362 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 363 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 408
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 365 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 410
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 365 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 410
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 365 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 410
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 307 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 366 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 367 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 412
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 364 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 365 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 410
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 226 bits (114), Expect = 4e-56 Identities = 243/286 (84%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| || Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 309 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 368 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 369 gctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatc 414
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 200 bits (101), Expect = 2e-48 Identities = 281/341 (82%) Strand = Plus / Plus Query: 54 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 113 |||| ||||||||||| ||||| ||||||||| || ||||||||||| |||||||||| Sbjct: 7 agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66 Query: 114 tcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatca 173 ||||||||||||| |||||||| || ||||| || || ||||||||||| || | |||| Sbjct: 67 tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagcaaaattgatca 126 Query: 174 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 233 | ||| | |||||||| || | ||||| |||| ||| || |||||||| || || |||| Sbjct: 127 gacagagataccgtgaagcctctgacattatcaggaaaggaaagatgtgttgtctgttca 186 Query: 234 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 293 |||||||||| || || || || ||| | ||||| |||||||| || ||||| ||||||| Sbjct: 187 tcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacactgtcaaca 246 Query: 294 accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 353 |||| |||||||| ||||| || |||||||| || ||| ||||||||| || || |||| Sbjct: 247 accaaatggtgaatgccacactcatgaacattgctgataaccccaccaatgtccaactcc 306 Query: 354 ctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 |||| |||||||||||||| || || | |||||||||||| Sbjct: 307 ctggtatgtacaacaaggaagacaatgctcgtgtgcccatc 347
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 186 bits (94), Expect = 4e-44 Identities = 295/362 (81%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| |||| Sbjct: 537 tgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggtaaat 596 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 ||||||| ||||||||||| ||| |||||||| |||||||| || ||||||||||| | Sbjct: 597 cattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagtgctg 656 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 |||| | || ||||| || || ||||||||||| || | |||||||| ||||| | | Sbjct: 657 gagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggtacagag 716 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 |||| || || || |||| |||||| || ||||| ||||||||||||||||||||||| | Sbjct: 717 aggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacgatcttgatg 776 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | || || ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| | Sbjct: 777 caggagccggtagaatgggtggaactacacaatacactgtcaacaaccaaatggtgaatg 836 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 | || || |||||||| || ||| ||| || || || || ||||| || |||||||||| Sbjct: 837 ctacactcatgaacattgctgataacccgacgaatgtccaactccccggtatgtacaaca 896 Query: 369 ag 370 || Sbjct: 897 ag 898
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 167 bits (84), Expect = 3e-38 Identities = 222/268 (82%) Strand = Plus / Plus Query: 99 tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 158 ||||||||| ||||||| | ||| |||||| ||||||||| ||| ||||| || |||| Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502 Query: 159 cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 218 | |||||||||||| | ||||| ||||| |||||| | |||| | |||||||| |||| Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562 Query: 219 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 278 |||||| |||||||||||||||||| ||||||||||| || | |||||| ||| | Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgctggccgcatgggcatgggcaccc 1622 Query: 279 agtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca 338 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| ||| ||| | Sbjct: 1623 agtacactgtcaacaaccagatggtcaacgctaccctcatgaacatcgctgataacccta 1682 Query: 339 ccaacgtgcagctccctggcatgtacaa 366 ||||||||||||| || ||| ||||||| Sbjct: 1683 ccaacgtgcagctgcccggcgtgtacaa 1710 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 7 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 66 ||||||||| |||||| | || |||||| ||||||||||||| |||||||| || ||||| Sbjct: 1193 cctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaagggccagggaaa 1252
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 149 bits (75), Expect = 8e-33 Identities = 236/287 (82%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 |||||||||||||||||||||||| |||| ||||| || || ||||||||||| ||| | Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-c 227 |||||||| ||||||||||||| |||||| |||| |||||||||||||| ||| | Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctc 2539 Query: 228 tcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccg 287 | |||||||||||||| || | ||||| || | ||||| || ||||| || ||||||| Sbjct: 2540 tattcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccg 2599 Query: 288 tcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgc 347 | |||||||||||||| |||||||| || |||||||| || || ||| ||||| || | Sbjct: 2600 taaacaaccagatggttaacgccacactcatgaacattgctgacaacccaaccaatgtcc 2659 Query: 348 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 394 | |||||||| |||||||||||| |||| || ||||||| |||||| Sbjct: 2660 aactccctggtatgtacaacaagcaggacaatgcccgtgtccccatc 2706 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 21 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 80 |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| |||| Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297 Query: 81 agcttgtgttcgccaag 97 ||||||||||||||||| Sbjct: 2298 agcttgtgttcgccaag 2314
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 149 bits (75), Expect = 8e-33 Identities = 228/279 (81%) Strand = Plus / Plus Query: 109 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 168 |||||||||||||||||||||||| ||||||| || ||||| |||||||| || ||| | Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526 Query: 169 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 228 |||||||| |||| |||||||| || ||||| ||||||||||| ||||||| ||||| Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcct 586 Query: 229 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 288 || ||||| |||||||| || ||||| |||||| | || || || || || ||||| || Sbjct: 587 atttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgt 646 Query: 289 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 348 |||||||| |||||||| || ||||| |||||||| || || || ||||| || || Sbjct: 647 gaacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaaccaatgttca 706 Query: 349 gctccctggcatgtacaacaaggaggagaacccccgtgt 387 |||||| || |||||||||||||| ||||| || ||||| Sbjct: 707 gctcccgggtatgtacaacaaggaagagaatccacgtgt 745 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 29 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 88 ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245 Query: 89 ttcgccaagatgggcatcaa 108 || ||||||||||| ||||| Sbjct: 246 tttgccaagatgggaatcaa 265
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 137 bits (69), Expect = 3e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 197 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 256 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671 Query: 257 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 316 || | ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 731 Query: 317 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 376 |||||||||||||| ||| |||||||| ||||| || || ||||||| || |||||| Sbjct: 732 atgaacatcgccgacaacccgaccaacgtccagctgcccggtgtgtacaagaacgaggag 791 Query: 377 aacccccgtgtgcccat 393 | ||| || |||||||| Sbjct: 792 atccctcgcgtgcccat 808 Score = 46.1 bits (23), Expect = 0.086 Identities = 44/51 (86%) Strand = Plus / Plus Query: 7 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 57 ||||||||| |||||| | || ||||| ||||||||||||| |||||||| Sbjct: 422 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 472
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 135 bits (68), Expect = 1e-28 Identities = 290/364 (79%) Strand = Plus / Plus Query: 9 tgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaat 68 |||| ||||||||| | || ||||| | ||||| ||||||||||||||||||||||| | Sbjct: 218 tgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaagt 277 Query: 69 cattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccg 128 | ||||| ||||||||||| || || || |||| |||||||| || ||||||||||||| Sbjct: 278 ccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgccg 337 Query: 129 gagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtg 188 | || ||||||||||| | || |||||||| || || | ||||| |||| ||||||| Sbjct: 338 gtgaactggagagtggagatgcaggagagcccgcaaaattgatcagaaagcgataccgtg 397 Query: 189 aggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacg 248 | || || ||||| ||||||| || |||||||| |||||||| || ||||| || | Sbjct: 398 aagcggccgacattgtcaagaaaggaaagatgtgtgtgctcttcattaatgatctggatg 457 Query: 249 ctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacg 308 | || || || || ||||| | || || |||||||| || |||||||||||||| || | Sbjct: 458 caggagctggaagaatgggtagcacaactcagtacactgtgaacaaccagatggtcaatg 517 Query: 309 ccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaaca 368 ||||||| |||||||| || ||| ||| || || || ||| | ||||| |||||||||| Sbjct: 518 ccaccctcatgaacattgctgataacccaacgaatgttcagttgcctggaatgtacaaca 577 Query: 369 agga 372 |||| Sbjct: 578 agga 581
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 123 bits (62), Expect = 5e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 197 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 256 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883 Query: 257 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 316 || | ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 1943 Query: 317 atgaacatcgccga 330 |||||||||||||| Sbjct: 1944 atgaacatcgccga 1957 Score = 46.1 bits (23), Expect = 0.086 Identities = 44/51 (86%) Strand = Plus / Plus Query: 7 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 57 ||||||||| |||||| | || ||||| ||||||||||||| |||||||| Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 123 bits (62), Expect = 5e-25 Identities = 293/370 (79%) Strand = Plus / Plus Query: 3 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 62 ||||||| || ||||| ||| | || ||||| ||||| | |||||||| || ||||||| Sbjct: 529 tgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaaggtcaag 588 Query: 63 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 122 |||| || ||||||||||| ||||| || || |||||||| |||||||| || ||||||| Sbjct: 589 gaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctattatgatga 648 Query: 123 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 182 |||| || || | || |||||||| || ||||||||||| || | |||||||| | | Sbjct: 649 gtgctggggaattagaaagtgggaatgcaggagagccagcaaaattgatcaggcaaagat 708 Query: 183 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 242 || | ||||| || || || |||||||| || || ||||| || || || |||||||||| Sbjct: 709 acagagaggcagctgatatcatcaagaaagggaaaatgtgttgtctatttatcaacgatc 768 Query: 243 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 302 |||| ||||| || || ||| | || || || || |||||||| || || |||||||||| Sbjct: 769 ttgatgctggagctggaaggcttggtgggactacccagtacacagtgaataaccagatgg 828 Query: 303 tgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgt 362 | || || || || |||||||| || || ||| ||||| |||||||| || ||||||| Sbjct: 829 taaatgctactcttatgaacattgctgacaacccaaccaatgtgcagctaccaggcatgt 888 Query: 363 acaacaagga 372 | |||||||| Sbjct: 889 ataacaagga 898
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 302 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 361 ||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||| Sbjct: 1 gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60 Query: 362 tacaacaaggaggagaacccccgtgtgcccatc 394 |||||||||||||| ||||||||||| |||||| Sbjct: 61 tacaacaaggaggacaacccccgtgtccccatc 93
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 115 bits (58), Expect = 1e-22 Identities = 136/162 (83%) Strand = Plus / Plus Query: 218 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 277 ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || Sbjct: 55 atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114 Query: 278 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 337 || ||||| |||||||||||||||||||| ||||| || ||||||||||| ||| ||| Sbjct: 115 caatacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccg 174 Query: 338 accaacgtgcagctccctggcatgtacaacaaggaggagaac 379 || || || |||||||| || |||||||||||| | |||||| Sbjct: 175 acaaatgtccagctccccggtatgtacaacaagcaagagaac 216
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 113 bits (57), Expect = 4e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 116 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 175 ||||||||||||||||| |||| ||||| || || |||||||| || ||| | || ||| Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203 Query: 176 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 235 || ||||||||||||| | ||||| |||| || || ||||||||||| ||||||||| Sbjct: 7202 caaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatc 7143 Query: 236 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 295 || |||||||| || || || ||||| ||||| || || || || ||||| ||||||||| Sbjct: 7142 aatgatcttgatgcaggagctggtagaatgggtggcactactcaatacacagtcaacaac 7083 Query: 296 cagatggtgaacgccaccctgatgaacat 324 |||||||| || || ||||| |||||||| Sbjct: 7082 cagatggtaaatgcaaccctcatgaacat 7054 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 20 aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 79 ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || ||| Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482 Query: 80 gagcttgtgttcgccaagatgggcatca 107 |||||||| || ||||||||||| |||| Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 278 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 337 |||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||| Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661 Query: 338 accaacgtgcagct 351 |||||||||||||| Sbjct: 445660 accaacgtgcagct 445647
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 282 acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacca 341 |||| ||||||||||||||||| ||||||||||| |||||||| || || ||| |||| Sbjct: 1 acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60 Query: 342 acgtgcagctccctggcatgtacaacaaggagga 375 | || ||||||||||| |||||||||||| |||| Sbjct: 61 atgtccagctccctggtatgtacaacaagcagga 94
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 38 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 97 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874 Query: 98 atgggcatcaa 108 ||||||||||| Sbjct: 104873 atgggcatcaa 104863 Score = 46.1 bits (23), Expect = 0.086 Identities = 86/107 (80%) Strand = Plus / Minus Query: 218 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 277 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019 Query: 278 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 324 |||||||| || ||||| || ||||| || || || || |||||||| Sbjct: 104018 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacat 103972 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/50 (86%) Strand = Plus / Minus Query: 113 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 162 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 38 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 97 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899 Query: 98 atgggcatcaa 108 ||||||||||| Sbjct: 83898 atgggcatcaa 83888 Score = 46.1 bits (23), Expect = 0.086 Identities = 86/107 (80%) Strand = Plus / Minus Query: 218 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 277 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044 Query: 278 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 324 |||||||| || ||||| || ||||| || || || || |||||||| Sbjct: 83043 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacat 82997 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/50 (86%) Strand = Plus / Minus Query: 113 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 162 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159
>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence Length = 262 Score = 67.9 bits (34), Expect = 2e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 209 aagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggc 268 ||||| |||||||| |||||||||||| |||||||| || || || ||||| | || Sbjct: 19 aaggggaagatgtgtgtcctcttcatcaatgatcttgatgcaggggctggtagacttggt 78 Query: 269 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 328 ||||| || || || || ||||| |||||||||||||| || ||||| |||||||| || Sbjct: 79 ggaactacacaatatacagtcaataaccagatggtgaatgcaacccttatgaacattgct 138 Query: 329 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 378 ||| || || || || ||||||||||| ||||||||||| ||||||| Sbjct: 139 gataatccaactaatgttcagctccctggtatgtacaacaaacaggagaa 188
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 60.0 bits (30), Expect = 6e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 257 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 316 ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| || Sbjct: 8 ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67 Query: 317 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 370 |||||||| || || ||| || || || |||||||| || |||||||||||| Sbjct: 68 atgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaag 121
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 361 gtacaacaaggaggagaacccccgtgtgccc 391 ||||||||| || |||||||||||||||||| Sbjct: 1 gtacaacaaagaagagaacccccgtgtgccc 31
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ccctgcccaacatcaagatc 25 |||||||||||||||||||| Sbjct: 1130357 ccctgcccaacatcaagatc 1130376
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 gagaacccccgtgtgcccatcgtc 397 |||||||| ||||||||||||||| Sbjct: 1 gagaacccacgtgtgcccatcgtc 24
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttccagtgtgagcttgtgtt 90 |||||||||||||||||||| Sbjct: 97287 ttccagtgtgagcttgtgtt 97268
>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1) (apl-1) mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 tgatgaacatcgccgatgcc 334 |||||||||||||||||||| Sbjct: 1896 tgatgaacatcgccgatgcc 1877
>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1) (apl-1) mRNA, complete cds Length = 2742 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 tgatgaacatcgccgatgcc 334 |||||||||||||||||||| Sbjct: 1897 tgatgaacatcgccgatgcc 1878
>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence Length = 42802 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tgatgaacatcgccgatgcc 334 |||||||||||||||||||| Sbjct: 34318 tgatgaacatcgccgatgcc 34337
>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the complete sequence Length = 10900 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ccctgcccaacatcaagatc 25 |||||||||||||||||||| Sbjct: 7760 ccctgcccaacatcaagatc 7741
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ccctgcccaacatcaagatc 25 |||||||||||||||||||| Sbjct: 1147720 ccctgcccaacatcaagatc 1147739
>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 (ENSANGG00000011813), partial mRNA Length = 1773 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tcgccaagatgggcatcaac 109 |||||||||||||||||||| Sbjct: 641 tcgccaagatgggcatcaac 660
>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA complete cds Length = 2742 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 tgatgaacatcgccgatgcc 334 |||||||||||||||||||| Sbjct: 1882 tgatgaacatcgccgatgcc 1863
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ccctgcccaacatcaagatc 25 |||||||||||||||||||| Sbjct: 1144872 ccctgcccaacatcaagatc 1144891
>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1 outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ), and LpxA (lpxA) genes, complete cds Length = 8895 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ccctgcccaacatcaagatc 25 |||||||||||||||||||| Sbjct: 8238 ccctgcccaacatcaagatc 8219
>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tggagagtgggaacgctgga 154 |||||||||||||||||||| Sbjct: 90247 tggagagtgggaacgctgga 90228 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,125,978 Number of Sequences: 3902068 Number of extensions: 3125978 Number of successful extensions: 63106 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62847 Number of HSP's gapped (non-prelim): 228 length of query: 397 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 375 effective length of database: 17,147,199,772 effective search space: 6430199914500 effective search space used: 6430199914500 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
