ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet27c08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 Score = 295 bits (149), Expect = 6e-77 Identities = 167/173 (96%) Strand = Plus / Plus Query: 259 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaaca 318 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 74 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaaca 133 Query: 319 acaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccg 378 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 acaactacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccg 193 Query: 379 gcggcccgtccgggcgcttcaccaacggcctcaccaccgtcgacgtcatcgct 431 ||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 194 gcggcccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatcgct 246
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 291 bits (147), Expect = 9e-76 Identities = 165/171 (96%) Strand = Plus / Plus Query: 259 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaaca 318 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 30355290 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaaca 30355349 Query: 319 acaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccg 378 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30355350 acaactacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccg 30355409 Query: 379 gcggcccgtccgggcgcttcaccaacggcctcaccaccgtcgacgtcatcg 429 ||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 30355410 gcggcccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatcg 30355460 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||| Sbjct: 31324865 ccgcaggtgccgtgctacttcgtgttcggggactcgctcgtggacaacgggaacaacaac 31324924 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 |||||| ||| ||||||| ||||||||||||||||||||| |||||||| |||||||| Sbjct: 31324925 aacatcgcgtcgatggcgcgggccaactacccgccctacggcgtcgacttccccggcggc 31324984 Query: 384 ccgtccgggcgcttcaccaacggcctcaccac 415 || |||| || |||| ||||||||||||||| Sbjct: 31324985 gcgaccggccggttcagcaacggcctcaccac 31325016 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||||||||||||| ||||| ||||||| Sbjct: 26299811 cttcagcttcggcgactcgctgacggacaccggcaac 26299847 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ctgtagctactagctagctag 136 ||||||||||||||||||||| Sbjct: 22143749 ctgtagctactagctagctag 22143729 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 6277762 cttcaacttcggggactcgctggtggacgccggcaac 6277798 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||| ||| ||| ||||||| |||||| Sbjct: 42249472 ttcggcgactcgccggttgacgacggcaataacaac 42249437 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaac 317 |||| |||||||||||||||| ||||| ||||||| Sbjct: 6318573 ttcagcttcggcgactcgctgacggacaccggcaac 6318608
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 291 bits (147), Expect = 9e-76 Identities = 165/171 (96%) Strand = Plus / Plus Query: 259 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaaca 318 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 143609 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaaca 143668 Query: 319 acaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccg 378 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143669 acaactacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccg 143728 Query: 379 gcggcccgtccgggcgcttcaccaacggcctcaccaccgtcgacgtcatcg 429 ||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 143729 gcggcccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatcg 143779
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 291 bits (147), Expect = 9e-76 Identities = 165/171 (96%) Strand = Plus / Plus Query: 259 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaaca 318 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 41017 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaaca 41076 Query: 319 acaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccg 378 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41077 acaactacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccg 41136 Query: 379 gcggcccgtccgggcgcttcaccaacggcctcaccaccgtcgacgtcatcg 429 ||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 41137 gcggcccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatcg 41187
>dbj|AK070946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074K21, full insert sequence Length = 2149 Score = 291 bits (147), Expect = 9e-76 Identities = 165/171 (96%) Strand = Plus / Plus Query: 259 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaaca 318 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 170 gcgacccgcaggtgccgtgctacttcatcttcggcgactcgctcgtcgacaacggcaaca 229 Query: 319 acaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccg 378 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 acaactacatcgtttcgctggcgcgcgccaactacccgccctacggcatcgacttcgccg 289 Query: 379 gcggcccgtccgggcgcttcaccaacggcctcaccaccgtcgacgtcatcg 429 ||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 290 gcggcccgtccggccggttcaccaacggcctcaccaccgtcgacgtcatcg 340
>ref|XM_475723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 216 bits (109), Expect = 4e-53 Identities = 155/168 (92%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 82 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 141 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 201 Query: 384 -ccg--tccgggcgcttcaccaacggcctcaccaccgtcgacgtcatc 428 ||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 202 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatc 249
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 216 bits (109), Expect = 4e-53 Identities = 155/168 (92%), Gaps = 3/168 (1%) Strand = Plus / Minus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 1004 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 945 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 885 Query: 384 -ccg--tccgggcgcttcaccaacggcctcaccaccgtcgacgtcatc 428 ||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 884 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatc 837
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 216 bits (109), Expect = 4e-53 Identities = 155/168 (92%), Gaps = 3/168 (1%) Strand = Plus / Minus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 124956 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 124897 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 124896 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 124837 Query: 384 -ccg--tccgggcgcttcaccaacggcctcaccaccgtcgacgtcatc 428 ||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 124836 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatc 124789
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 216 bits (109), Expect = 4e-53 Identities = 155/168 (92%), Gaps = 3/168 (1%) Strand = Plus / Minus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 25484595 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 25484536 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 25484535 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 25484476 Query: 384 -ccg--tccgggcgcttcaccaacggcctcaccaccgtcgacgtcatc 428 ||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 25484475 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatc 25484428 Score = 79.8 bits (40), Expect = 7e-12 Identities = 100/120 (83%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| ||||| ||| ||||||||| ||||||||| |||| ||| ||||| ||| Sbjct: 20442233 ttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggccaaggcc 20442292 Query: 348 aactacccgccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggc 407 ||||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 20442293 aactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctccaacggc 20442352 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 336 ctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 |||| ||||||| || || ||||||||||| ||||||| |||||||| Sbjct: 22849083 ctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggc 22849036
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 216 bits (109), Expect = 4e-53 Identities = 155/168 (92%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 146 ccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaac 205 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 gatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggc 265 Query: 384 -ccg--tccgggcgcttcaccaacggcctcaccaccgtcgacgtcatc 428 ||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 266 gccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatc 313
>ref|NM_191210.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||| Sbjct: 76 ccgcaggtgccgtgctacttcgtgttcggggactcgctcgtggacaacgggaacaacaac 135 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 |||||| ||| ||||||| ||||||||||||||||||||| |||||||| |||||||| Sbjct: 136 aacatcgcgtcgatggcgcgggccaactacccgccctacggcgtcgacttccccggcggc 195 Query: 384 ccgtccgggcgcttcaccaacggcctcaccac 415 || |||| || |||| ||||||||||||||| Sbjct: 196 gcgaccggccggttcagcaacggcctcaccac 227
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 264 ccgcaggtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||| Sbjct: 79148 ccgcaggtgccgtgctacttcgtgttcggggactcgctcgtggacaacgggaacaacaac 79207 Query: 324 tacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 |||||| ||| ||||||| ||||||||||||||||||||| |||||||| |||||||| Sbjct: 79208 aacatcgcgtcgatggcgcgggccaactacccgccctacggcgtcgacttccccggcggc 79267 Query: 384 ccgtccgggcgcttcaccaacggcctcaccac 415 || |||| || |||| ||||||||||||||| Sbjct: 79268 gcgaccggccggttcagcaacggcctcaccac 79299
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 3e-32 Identities = 120/133 (90%), Gaps = 3/133 (2%) Strand = Plus / Minus Query: 284 catcttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcg 343 |||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 10070984 catcttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcg 10070925 Query: 344 cgccaactacccgccctacggcatcgacttcgccggcg--gc-ccgtccgggcgcttcac 400 ||||||||||| ||||||||| ||||||||| |||||| || ||| | ||||||||||| Sbjct: 10070924 cgccaactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcac 10070865 Query: 401 caacggcctcacc 413 ||||||||||||| Sbjct: 10070864 caacggcctcacc 10070852 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 288 ttcggcgactcgctggtggacaacggcaacaac 320 ||||||||||||||||||||| |||||||||| Sbjct: 23332579 ttcggcgactcgctggtggacgtcggcaacaac 23332547
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 147 bits (74), Expect = 3e-32 Identities = 120/133 (90%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 284 catcttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcg 343 |||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 172 catcttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcg 231 Query: 344 cgccaactacccgccctacggcatcgacttcgccggcg--gc-ccgtccgggcgcttcac 400 ||||||||||| ||||||||| ||||||||| |||||| || ||| | ||||||||||| Sbjct: 232 cgccaactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcac 291 Query: 401 caacggcctcacc 413 ||||||||||||| Sbjct: 292 caacggcctcacc 304
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 3e-32 Identities = 120/133 (90%), Gaps = 3/133 (2%) Strand = Plus / Minus Query: 284 catcttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcg 343 |||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 10070869 catcttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcg 10070810 Query: 344 cgccaactacccgccctacggcatcgacttcgccggcg--gc-ccgtccgggcgcttcac 400 ||||||||||| ||||||||| ||||||||| |||||| || ||| | ||||||||||| Sbjct: 10070809 cgccaactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcac 10070750 Query: 401 caacggcctcacc 413 ||||||||||||| Sbjct: 10070749 caacggcctcacc 10070737 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 288 ttcggcgactcgctggtggacaacggcaacaac 320 ||||||||||||||||||||| |||||||||| Sbjct: 23260770 ttcggcgactcgctggtggacgtcggcaacaac 23260738
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 147 bits (74), Expect = 3e-32 Identities = 120/133 (90%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 284 catcttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcg 343 |||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 91637 catcttcggcgactcgctggtggacagcggcaacaacaacaacatcctgagcctggcgcg 91696 Query: 344 cgccaactacccgccctacggcatcgacttcgccggcg--gc-ccgtccgggcgcttcac 400 ||||||||||| ||||||||| ||||||||| |||||| || ||| | ||||||||||| Sbjct: 91697 cgccaactaccagccctacgggatcgacttctccggcgcggcgccgccggggcgcttcac 91756 Query: 401 caacggcctcacc 413 ||||||||||||| Sbjct: 91757 caacggcctcacc 91769
>gb|BT018449.1| Zea mays clone EL01N0407B08.d mRNA sequence Length = 1302 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 348 aactacccgccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggc 407 |||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 117 aactacccgccctacggcatcgacttcgccggcggccccaccggccgcttctccaacggc 176 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||| ||||||||| ||||||||||||||||||| Sbjct: 57 ttcggggactcgctgacggacaacggcaacaacaac 92
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 79.8 bits (40), Expect = 7e-12 Identities = 100/120 (83%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| ||||| ||| ||||||||| ||||||||| |||| ||| ||||| ||| Sbjct: 113978 ttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggccaaggcc 114037 Query: 348 aactacccgccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggc 407 ||||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 114038 aactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctccaacggc 114097
>dbj|AK100958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K23, full insert sequence Length = 1556 Score = 79.8 bits (40), Expect = 7e-12 Identities = 100/120 (83%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| ||||| ||| ||||||||| ||||||||| |||| ||| ||||| ||| Sbjct: 224 ttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggccaaggcc 283 Query: 348 aactacccgccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggc 407 ||||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 284 aactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctccaacggc 343
>emb|AJ234640.1|HVU234640 Hordeum vulgare genomic DNA fragment; clone MWG0904.rev Length = 416 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 270 gtgccgtgctacttcatcttcggcgactcgctggtggacaacggcaacaacaactacatc 329 ||||||||||||||| | ||||| ||||||||||||||||| || ||||||||| ||||| Sbjct: 353 gtgccgtgctacttcgtgttcggggactcgctggtggacaatgggaacaacaacgacatc 412 Query: 330 g 330 | Sbjct: 413 g 413
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 126 ttcggcgactcgctggtggacaacggcaataacaactac 164
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 103347 ttcggcgactcgctggtggacaacggcaataacaactac 103309
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 16556895 ttcggcgactcgctggtggacaacggcaataacaactac 16556933 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 |||||||||||| | ||||||| ||||||||||||||| Sbjct: 2471754 ttcggcgactcgatcgtggacacgggcaacaacaactac 2471792
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 138 ttcggcgactcgctggtggacaacggcaataacaactac 176
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 16565136 ttcggcgactcgctggtggacaacggcaataacaactac 16565174 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 |||||||||||| | ||||||| ||||||||||||||| Sbjct: 2471705 ttcggcgactcgatcgtggacacgggcaacaacaactac 2471743
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 291 ggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||| |||||||||||||||| Sbjct: 231 ggcgactcgctggtggacagcggcaacaacaactac 266
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 291 ggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||| |||||||||||||||| Sbjct: 28339365 ggcgactcgctggtggacagcggcaacaacaactac 28339400 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 357 ccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggcctcaccacc 416 |||||||||||||||||||||| |||||| |||| |||||| ||||||| ||||| | Sbjct: 680191 ccctacggcatcgacttcgccgccggcccaaccggccgcttctgcaacggctacaccatc 680250 Query: 417 gtcgacg 423 ||||||| Sbjct: 680251 gtcgacg 680257 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||| | |||||||| ||||||||| Sbjct: 680122 ttcggcgactcgctgatcgacaacgggaacaacaac 680157 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tagctagctagagcctagagc 146 ||||||||||||||||||||| Sbjct: 2308833 tagctagctagagcctagagc 2308813 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gtagctactagctagctaga 137 |||||||||||||||||||| Sbjct: 19379115 gtagctactagctagctaga 19379096
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 291 ggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||| |||||||||||||||| Sbjct: 68171 ggcgactcgctggtggacagcggcaacaacaactac 68206
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 291 ggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||| |||||||||||||||| Sbjct: 131180 ggcgactcgctggtggacagcggcaacaacaactac 131215
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 291 ggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||||||| |||||||||||||||| Sbjct: 231 ggcgactcgctggtggacagcggcaacaacaactac 266
>ref|XM_507096.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.26 mRNA Length = 1449 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 357 ccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggcctcaccacc 416 |||||||||||||||||||||| |||||| |||| |||||| ||||||| ||||| | Sbjct: 244 ccctacggcatcgacttcgccgccggcccaaccggccgcttctgcaacggctacaccatc 303 Query: 417 gtcgacg 423 ||||||| Sbjct: 304 gtcgacg 310 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||| | |||||||| ||||||||| Sbjct: 175 ttcggcgactcgctgatcgacaacgggaacaacaac 210
>ref|XM_479754.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1327 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 357 ccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggcctcaccacc 416 |||||||||||||||||||||| |||||| |||| |||||| ||||||| ||||| | Sbjct: 252 ccctacggcatcgacttcgccgccggcccaaccggccgcttctgcaacggctacaccatc 311 Query: 417 gtcgacg 423 ||||||| Sbjct: 312 gtcgacg 318 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||| | |||||||| ||||||||| Sbjct: 183 ttcggcgactcgctgatcgacaacgggaacaacaac 218
>ref|XM_473111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 103 ttcggggactcgctcgtggacaacggcaacaacaactac 141
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 126347 ttcggggactcgctcgtggacaacggcaacaacaactac 126385
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 68967 ttcggggactcgctcgtggacaacggcaacaacaactac 69005
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 25342408 ttcggggactcgctcgtggacaacggcaacaacaactac 25342446
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 357 ccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggcctcaccacc 416 |||||||||||||||||||||| |||||| |||| |||||| ||||||| ||||| | Sbjct: 107569 ccctacggcatcgacttcgccgccggcccaaccggccgcttctgcaacggctacaccatc 107628 Query: 417 gtcgacg 423 ||||||| Sbjct: 107629 gtcgacg 107635 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||| | |||||||| ||||||||| Sbjct: 107500 ttcggcgactcgctgatcgacaacgggaacaacaac 107535
>dbj|AK121383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I10, full insert sequence Length = 1929 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 605 ttcggggactcgctcgtggacaacggcaacaacaactac 643
>dbj|AK105876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B10, full insert sequence Length = 1449 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 357 ccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggcctcaccacc 416 |||||||||||||||||||||| |||||| |||| |||||| ||||||| ||||| | Sbjct: 244 ccctacggcatcgacttcgccgccggcccaaccggccgcttctgcaacggctacaccatc 303 Query: 417 gtcgacg 423 ||||||| Sbjct: 304 gtcgacg 310 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||| | |||||||| ||||||||| Sbjct: 175 ttcggcgactcgctgatcgacaacgggaacaacaac 210
>dbj|AK069672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A20, full insert sequence Length = 1327 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 357 ccctacggcatcgacttcgccggcggcccgtccgggcgcttcaccaacggcctcaccacc 416 |||||||||||||||||||||| |||||| |||| |||||| ||||||| ||||| | Sbjct: 252 ccctacggcatcgacttcgccgccggcccaaccggccgcttctgcaacggctacaccatc 311 Query: 417 gtcgacg 423 ||||||| Sbjct: 312 gtcgacg 318 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||||| | |||||||| ||||||||| Sbjct: 183 ttcggcgactcgctgatcgacaacgggaacaacaac 218
>gb|AY106609.1| Zea mays PCO140750 mRNA sequence Length = 634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| ||||| || |||||||||||||||||||||||| || || || |||||| ||| Sbjct: 207 ttcggggactccctcgtggacaacggcaacaacaactacctcatgaccacggcgcgggcc 266 Query: 348 aactacccgccctacggcatcgacttc 374 || ||||||||||| ||||||||| Sbjct: 267 gacgcgccgccctacgggatcgacttc 293
>ref|XM_468393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1517 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 168 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 213
>ref|XM_507548.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.14 mRNA Length = 1525 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 168 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 213
>ref|XM_507046.2| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.14 mRNA Length = 1558 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 168 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 213
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 34987587 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 34987542 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||| || || ||||||||||||||||||||| Sbjct: 24535962 ttcggcgactccctcgtcgacaacggcaacaacaactac 24536000 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 11093132 tacggcatcgacttccccggcggc 11093155 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 11071011 tacggcatcgacttccccggcggc 11071034
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 47928 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 47883
>dbj|AK106084.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B01, full insert sequence Length = 1525 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 168 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 213
>dbj|AK099251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154O11, full insert sequence Length = 1517 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 168 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 213
>dbj|AK060243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G01, full insert sequence Length = 1558 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaacaacaactac 326 |||| ||||||||||||| || || ||||||||||||||||||||| Sbjct: 168 cttcgtcttcggcgactccctcgtcgacaacggcaacaacaactac 213
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaacaacaactacatc 329 ||||||||||| |||||||| || ||| ||||||||||||||||||| Sbjct: 28171058 ttcatcttcggggactcgctcgtcgacgccggcaacaacaactacatc 28171011 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ggaagctagctagctagccgt 180 ||||||||||||||||||||| Sbjct: 27523778 ggaagctagctagctagccgt 27523798 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 agctagctagagcctagagc 146 |||||||||||||||||||| Sbjct: 29512645 agctagctagagcctagagc 29512664 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 cgccctacggcatcgacttcgccg 378 ||||| |||||||||||||||||| Sbjct: 28170985 cgcccaacggcatcgacttcgccg 28170962
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 296 ctcgctggtggacaacggcaacaacaac 323 |||||||||||||||||||||||||||| Sbjct: 21100156 ctcgctggtggacaacggcaacaacaac 21100183 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 341 gcgcgccaactacccgccctacggcatcgacttc 374 ||||||| ||||| ||||||||||| |||||||| Sbjct: 21100207 gcgcgccgactacgcgccctacggcgtcgacttc 21100240 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctg 302 ||||||||||||||||||||| Sbjct: 6747004 ttcatcttcggcgactcgctg 6747024
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 296 ctcgctggtggacaacggcaacaacaac 323 |||||||||||||||||||||||||||| Sbjct: 97157 ctcgctggtggacaacggcaacaacaac 97184 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 341 gcgcgccaactacccgccctacggcatcgacttc 374 ||||||| ||||| ||||||||||| |||||||| Sbjct: 97208 gcgcgccgactacgcgccctacggcgtcgacttc 97241
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaacaacaactacatc 329 ||||||||||| |||||||| || ||| ||||||||||||||||||| Sbjct: 26603 ttcatcttcggggactcgctcgtcgacgccggcaacaacaactacatc 26556 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 cgccctacggcatcgacttcgccg 378 ||||| |||||||||||||||||| Sbjct: 26530 cgcccaacggcatcgacttcgccg 26507
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaacaacaactacatc 329 ||||||||||| |||||||| || ||| ||||||||||||||||||| Sbjct: 154354 ttcatcttcggggactcgctcgtcgacgccggcaacaacaactacatc 154307 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 cgccctacggcatcgacttcgccg 378 ||||| |||||||||||||||||| Sbjct: 154281 cgcccaacggcatcgacttcgccg 154258
>dbj|AK061122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G04, full insert sequence Length = 1666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaacaacaactacatc 329 ||||||||||| |||||||| || ||| ||||||||||||||||||| Sbjct: 262 ttcatcttcggggactcgctcgtcgacgccggcaacaacaactacatc 309 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cgccctacggcatcgacttcgccg 378 ||||| |||||||||||||||||| Sbjct: 335 cgcccaacggcatcgacttcgccg 358
>ref|XM_466762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1344 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||| || || ||||||||||||||||||||| Sbjct: 196 ttcggcgactccctcgtcgacaacggcaacaacaactac 234
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||| || || ||||||||||||||||||||| Sbjct: 50063 ttcggcgactccctcgtcgacaacggcaacaacaactac 50101
>dbj|AK108108.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B09, full insert sequence Length = 1344 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||| || || ||||||||||||||||||||| Sbjct: 196 ttcggcgactccctcgtcgacaacggcaacaacaactac 234
>gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence Length = 208667 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 54 cttccacttctctctcctcctcgtccatc 82 |||||||||||||||||||||| |||||| Sbjct: 131904 cttccacttctctctcctcctcctccatc 131932
>gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, complete sequence Length = 184805 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 54 cttccacttctctctcctcctcgtccatc 82 |||||||||||||||||||||| |||||| Sbjct: 153069 cttccacttctctctcctcctcctccatc 153041
>dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108M03, full insert sequence Length = 1582 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaac 320 ||||||||||||||||||||| |||||||||| Sbjct: 175 ttcggcgactcgctggtggacgtcggcaacaac 207
>dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D08, full insert sequence Length = 1741 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaac 320 ||||||||||||||||||||| |||||||||| Sbjct: 175 ttcggcgactcgctggtggacgtcggcaacaac 207
>dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G04, full insert sequence Length = 1637 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaac 320 ||||||||||||||||||||| |||||||||| Sbjct: 249 ttcggcgactcgctggtggacgtcggcaacaac 281
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 288 ttcggcgactcgctggtggacaacggcaacaac 320 ||||||||||||||||||||| |||||||||| Sbjct: 145697 ttcggcgactcgctggtggacgtcggcaacaac 145665
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 124 actagctagctagagcctagagct 147 |||||||||||||||||||||||| Sbjct: 18740 actagctagctagagcctagagct 18717
>dbj|AK063332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A03, full insert sequence Length = 1349 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 ctcgctggtggacaacggcaacaacaac 323 |||| ||||||||||||||||||||||| Sbjct: 203 ctcgttggtggacaacggcaacaacaac 230 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 341 gcgcgccaactacccgccctacggcatcgacttc 374 ||||||| ||||| ||||||||||| |||||||| Sbjct: 254 gcgcgccgactacgcgccctacggcgtcgacttc 287
>ref|NM_194799.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0029P06.17), mRNA Length = 351 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 |||||||||||| | ||||||| ||||||||||||||| Sbjct: 127 ttcggcgactcgatcgtggacacgggcaacaacaactac 165
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 |||||||||||| | ||||||| ||||||||||||||| Sbjct: 36953 ttcggcgactcgatcgtggacacgggcaacaacaactac 36991
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 |||||||||||| | ||||||| ||||||||||||||| Sbjct: 128486 ttcggcgactcgatcgtggacacgggcaacaacaactac 128524
>dbj|AK100609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L07, full insert sequence Length = 1299 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactac 326 |||||||||||| | ||||||| ||||||||||||||| Sbjct: 158 ttcggcgactcgatcgtggacacgggcaacaacaactac 196
>emb|AJ276389.1|DOR276389 Dendrobium grex Madame Thong-IN mRNA for knotted1-like homeobox protein Length = 1400 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Minus Query: 285 atcttcggcgactcgctggtggacaacggcaacaacaactac 326 ||||||||||||||| ||||||||| || ||||| |||||| Sbjct: 172 atcttcggcgactcggtggtggacacaggaaacaataactac 131
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 cggcatcgacttcgccggcggc 383 |||||||||||||||||||||| Sbjct: 2694933 cggcatcgacttcgccggcggc 2694912
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatc 329 |||||||||||| |||||||| ||||||||||||| |||| Sbjct: 2448543 ttcggcgactcgtcggtggacacgggcaacaacaacttcatc 2448584 Score = 40.1 bits (20), Expect = 5.8 Identities = 59/72 (81%) Strand = Plus / Minus Query: 312 ggcaacaacaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgac 371 ||||||||||||| |||| | || ||||| | | |||||||||||| ||||| ||| Sbjct: 3531683 ggcaacaacaacttcatccagaccatggcgaggggcaactacccgccgtacgggcgggac 3531624 Query: 372 ttcgccggcggc 383 |||||||||||| Sbjct: 3531623 ttcgccggcggc 3531612
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatc 329 |||||||||||| |||||||| ||||||||||||| |||| Sbjct: 126953 ttcggcgactcgtcggtggacacgggcaacaacaacttcatc 126994
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatc 329 |||||||||||| |||||||| ||||||||||||| |||| Sbjct: 35133 ttcggcgactcgtcggtggacacgggcaacaacaacttcatc 35174
>dbj|AK059766.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G04, full insert sequence Length = 1134 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatc 329 |||||||||||| |||||||| ||||||||||||| |||| Sbjct: 154 ttcggcgactcgtcggtggacacgggcaacaacaacttcatc 195
>dbj|AK059484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F09, full insert sequence Length = 1326 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatc 329 |||||||||||| |||||||| ||||||||||||| |||| Sbjct: 157 ttcggcgactcgtcggtggacacgggcaacaacaacttcatc 198
>gb|AY105384.1| Zea mays PCO132086 mRNA sequence Length = 1137 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ctagctgtagctactagctagc 133 |||||||||||||||||||||| Sbjct: 993 ctagctgtagctactagctagc 972
>ref|NM_125960.2| Arabidopsis thaliana metalloendopeptidase AT5G65620 mRNA, complete cds Length = 2918 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ccacttccacttctctctcctcctc 75 |||||||||| |||||||||||||| Sbjct: 179 ccacttccacctctctctcctcctc 203
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 93 cttcaacttcggggactcgctggtggacgccggcaac 129
>ref|XM_480031.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2247 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tagctagctagagcctagagc 146 ||||||||||||||||||||| Sbjct: 9 tagctagctagagcctagagc 29
>ref|NM_192375.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 984 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||||||||||||| ||||| ||||||| Sbjct: 120 cttcagcttcggcgactcgctgacggacaccggcaac 156
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 tcaccaacggcctcaccaccg 417 ||||||||||||||||||||| Sbjct: 2305069 tcaccaacggcctcaccaccg 2305049
>gb|AY142682.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA, complete cds Length = 2407 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ccacttccacttctctctcctcctc 75 |||||||||| |||||||||||||| Sbjct: 176 ccacttccacctctctctcctcctc 200
>ref|XM_781940.1| PREDICTED: Strongylocentrotus purpuratus similar to myosin light chain kinase isoform 1 (LOC581963), mRNA Length = 8112 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 tcaccaccgtcgacgtcatcg 429 ||||||||||||||||||||| Sbjct: 2860 tcaccaccgtcgacgtcatcg 2880
>gb|AY045936.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA, complete cds Length = 2510 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ccacttccacttctctctcctcctc 75 |||||||||| |||||||||||||| Sbjct: 179 ccacttccacctctctctcctcctc 203
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ggaagctagctagctagccgt 180 ||||||||||||||||||||| Sbjct: 87749 ggaagctagctagctagccgt 87769
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 139960 cttcaacttcggggactcgctggtggacgccggcaac 139996
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 48828 cttcaacttcggggactcgctggtggacgccggcaac 48864 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaac 317 |||| |||||||||||||||| ||||| ||||||| Sbjct: 89639 ttcagcttcggcgactcgctgacggacaccggcaac 89674
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||||||||||||| ||||| ||||||| Sbjct: 112492 cttcagcttcggcgactcgctgacggacaccggcaac 112528
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ctgtagctactagctagctag 136 ||||||||||||||||||||| Sbjct: 39235 ctgtagctactagctagctag 39215
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctg 302 ||||||||||||||||||||| Sbjct: 76683 ttcatcttcggcgactcgctg 76703
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tagctagctagagcctagagc 146 ||||||||||||||||||||| Sbjct: 56332 tagctagctagagcctagagc 56312
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tagctagctagagcctagagc 146 ||||||||||||||||||||| Sbjct: 106960 tagctagctagagcctagagc 106940
>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13 Length = 63921 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ccacttccacttctctctcctcctc 75 |||||||||| |||||||||||||| Sbjct: 38429 ccacttccacctctctctcctcctc 38453
>dbj|AK111325.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D09, full insert sequence Length = 1000 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||||||||||||| ||||| ||||||| Sbjct: 316 cttcagcttcggcgactcgctgacggacaccggcaac 352
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full insert sequence Length = 1356 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 152 cttcaacttcggggactcgctggtggacgccggcaac 188
>dbj|AK072710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142K02, full insert sequence Length = 2323 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tagctagctagagcctagagc 146 ||||||||||||||||||||| Sbjct: 86 tagctagctagagcctagagc 106
>dbj|AK069801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030G06, full insert sequence Length = 2935 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 243 cttcaacttcggggactcgctggtggacgccggcaac 279
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full insert sequence Length = 1583 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 245 cttcaacttcggggactcgctggtggacgccggcaac 281
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full insert sequence Length = 1356 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 281 cttcatcttcggcgactcgctggtggacaacggcaac 317 ||||| |||||| ||||||||||||||| ||||||| Sbjct: 152 cttcaacttcggggactcgctggtggacgccggcaac 188
>gb|AY103735.1| Zea mays PCO135232 mRNA sequence Length = 1159 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gctagctagagcctagagcta 148 ||||||||||||||||||||| Sbjct: 98 gctagctagagcctagagcta 78
>emb|AJ845083.2| Streptomyces tenjimariensis istamycin biosynthesis cluster, strain ATCC 31603 Length = 67904 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 cgactcgctggtggacaacggcaacaaca 321 ||||||||||||| |||||||||||||| Sbjct: 36614 cgactcgctggtgaccaacggcaacaaca 36586
>gb|J04202.1|BLYAMY46 Barley alpha-amylase type B (Amy46) gene, complete cds Length = 2159 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 agctagctagagcctagagct 147 ||||||||||||||||||||| Sbjct: 438 agctagctagagcctagagct 458
>emb|AL671275.11| Mouse DNA sequence from clone RP23-344J21 on chromosome X, complete sequence Length = 160338 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 tccacttccacttctctctcc 70 ||||||||||||||||||||| Sbjct: 104619 tccacttccacttctctctcc 104639
>ref|XM_482311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gtagctactagctagctaga 137 |||||||||||||||||||| Sbjct: 852 gtagctactagctagctaga 833
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA Length = 1125 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaac 317 |||| |||||||||||||||| ||||| ||||||| Sbjct: 121 ttcagcttcggcgactcgctgacggacaccggcaac 156
>ref|XM_475407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 336 ctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 |||| ||||||| || || ||||||||||| ||||||| |||||||| Sbjct: 184 ctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggc 231
>ref|XM_465039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 226 tacggcatcgacttccccggcggc 249
>ref|XM_465038.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1397 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 220 tacggcatcgacttccccggcggc 243
>ref|XM_450256.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1183 Score = 40.1 bits (20), Expect = 5.8 Identities = 77/96 (80%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||||||||| || ||||| ||||||||||||| |||| | || ||||| | | | Sbjct: 155 ttcggcgactccacggcggacacgggcaacaacaacttcatccagaccatggcgaggggc 214 Query: 348 aactacccgccctacggcatcgacttcgccggcggc 383 ||||||||||| ||||| ||||||||||||||| Sbjct: 215 aactacccgccgtacgggcgggacttcgccggcggc 250
>ref|XM_479623.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1191 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 agctagctagagcctagagc 146 |||||||||||||||||||| Sbjct: 1061 agctagctagagcctagagc 1042
>ref|XM_868199.1| PREDICTED: Bos taurus similar to atonal homolog 8 (LOC616225), mRNA Length = 1982 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 caactacatcgtgtccctggcgcg 343 |||||||||| ||||||||||||| Sbjct: 816 caactacatcctgtccctggcgcg 839
>ref|XM_322253.1| Neurospora crassa OR74A hypothetical protein (NCU00168.1) partial mRNA Length = 918 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 caccaacggcctcaccaccgtcgacgtc 425 ||||| |||||||||||||| ||||||| Sbjct: 735 caccaccggcctcaccaccgccgacgtc 762
>ref|XM_951588.1| Neurospora crassa OR74A hypothetical protein (NCU00168.1) partial mRNA Length = 918 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 caccaacggcctcaccaccgtcgacgtc 425 ||||| |||||||||||||| ||||||| Sbjct: 735 caccaccggcctcaccaccgccgacgtc 762
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 336 ctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 |||| ||||||| || || ||||||||||| ||||||| |||||||| Sbjct: 47787 ctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggc 47740
>gb|AY596534.1| Saccharum officinarum clone SCJLLR1104A08, complete sequence Length = 1065 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 tagctgtagctactagctag 132 |||||||||||||||||||| Sbjct: 111 tagctgtagctactagctag 130
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.8 Identities = 71/88 (80%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| |||||||| || ||| ||||||||||||||| |||| |||||| | || Sbjct: 11033265 ttcggtgactcgctcgtcgacgccggcaacaacaactatctcgtctccctgtccaaggca 11033324 Query: 348 aactacccgccctacggcatcgacttcg 375 |||||||| || ||||||||||||||| Sbjct: 11033325 aactacccaccaaacggcatcgacttcg 11033352
>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence Length = 154737 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 atccacttccacttctctct 68 |||||||||||||||||||| Sbjct: 22022 atccacttccacttctctct 22003
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 gccctacggcatcgacttcgccggcggc 383 |||| |||||| |||||||||||||||| Sbjct: 2266884 gcccaacggcagcgacttcgccggcggc 2266911
>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074L01, complete sequence Length = 115339 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gtagctactagctagctaga 137 |||||||||||||||||||| Sbjct: 90458 gtagctactagctagctaga 90477
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 40.1 bits (20), Expect = 5.8 Identities = 71/88 (80%) Strand = Plus / Minus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| |||||||| || ||| ||||||||||||||| |||| |||||| | || Sbjct: 99857 ttcggtgactcgctcgtcgacgccggcaacaacaactatctcgtctccctgtccaaggca 99798 Query: 348 aactacccgccctacggcatcgacttcg 375 |||||||| || ||||||||||||||| Sbjct: 99797 aactacccaccaaacggcatcgacttcg 99770
>emb|BX897676.1| Neurospora crassa DNA linkage group VI BAC clone B8I24 Length = 83591 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 agctagctagctagccgtgt 182 |||||||||||||||||||| Sbjct: 48563 agctagctagctagccgtgt 48582
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cttctctctcctcctcgtcc 79 |||||||||||||||||||| Sbjct: 231697 cttctctctcctcctcgtcc 231678
>emb|AJ866846.1| Hordeum vulgare subsp. vulgare transposon MITE Jura, clone SQ005T7B09 Length = 694 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gaagctagctagctagccgt 180 |||||||||||||||||||| Sbjct: 195 gaagctagctagctagccgt 214
>ref|NM_001039969.1| Gallus gallus keratin associated protein 10-9 (KRTAP10-9), mRNA Length = 622 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caacggcaacaacaactaca 327 |||||||||||||||||||| Sbjct: 102 caacggcaacaacaactaca 121
>gb|AC117398.3| Homo sapiens 3 BAC RP11-715A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109182 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 gtgactcgtgctagctcctctggt 28 ||||||||||||||||||| |||| Sbjct: 74704 gtgactcgtgctagctcctttggt 74727
>gb|AF172321.1|AF172321 Gallus gallus JAC (JAC) mRNA, complete cds Length = 622 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caacggcaacaacaactaca 327 |||||||||||||||||||| Sbjct: 102 caacggcaacaacaactaca 121
>gb|AF239161.1|AF239161 Gallus gallus JAC protein (JAC) gene, complete cds Length = 6758 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caacggcaacaacaactaca 327 |||||||||||||||||||| Sbjct: 4369 caacggcaacaacaactaca 4388
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gtagctactagctagctaga 137 |||||||||||||||||||| Sbjct: 1092176 gtagctactagctagctaga 1092195
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.8 Identities = 71/88 (80%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| |||||||| || ||| ||||||||||||||| |||| |||||| | || Sbjct: 11030028 ttcggtgactcgctcgtcgacgccggcaacaacaactatctcgtctccctgtccaaggca 11030087 Query: 348 aactacccgccctacggcatcgacttcg 375 |||||||| || ||||||||||||||| Sbjct: 11030088 aactacccaccaaacggcatcgacttcg 11030115
>gb|AC009461.5|AC009461 Drosophila melanogaster, chromosome 3R, region 90B-90C, BAC clone BACR11L13, complete sequence Length = 171612 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tccatatccacttccacttc 63 |||||||||||||||||||| Sbjct: 28152 tccatatccacttccacttc 28133
>gb|AC007804.6|AC007804 Drosophila melanogaster, chromosome 3R, region 90A-90B, BAC clone BACR29H07, complete sequence Length = 175440 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tccatatccacttccacttc 63 |||||||||||||||||||| Sbjct: 148723 tccatatccacttccacttc 148704
>gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosome 7, complete sequence Length = 186272 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atccacttccacttctctct 68 |||||||||||||||||||| Sbjct: 97054 atccacttccacttctctct 97073
>gb|AC018733.8| Homo sapiens BAC clone RP11-337H6 from 2, complete sequence Length = 163117 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cacttccacttctctctcct 71 |||||||||||||||||||| Sbjct: 20497 cacttccacttctctctcct 20516
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaac 323 ||||||||||||| ||| ||| ||||||| |||||| Sbjct: 21429 ttcggcgactcgccggttgacgacggcaataacaac 21394
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 acggcatcgacttcgccggcggcc 384 ||||||||||| |||||||||||| Sbjct: 1875686 acggcatcgacatcgccggcggcc 1875663
>dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1451_A02 Length = 135861 Score = 40.1 bits (20), Expect = 5.8 Identities = 59/72 (81%) Strand = Plus / Minus Query: 312 ggcaacaacaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgac 371 ||||||||||||| |||| | || ||||| | | |||||||||||| ||||| ||| Sbjct: 84571 ggcaacaacaacttcatccagaccatggcgaggggcaactacccgccgtacgggcgggac 84512 Query: 372 ttcgccggcggc 383 |||||||||||| Sbjct: 84511 ttcgccggcggc 84500
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 agctagctagagcctagagc 146 |||||||||||||||||||| Sbjct: 39317 agctagctagagcctagagc 39336
>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0499G10 Length = 158375 Score = 40.1 bits (20), Expect = 5.8 Identities = 59/72 (81%) Strand = Plus / Minus Query: 312 ggcaacaacaactacatcgtgtccctggcgcgcgccaactacccgccctacggcatcgac 371 ||||||||||||| |||| | || ||||| | | |||||||||||| ||||| ||| Sbjct: 17458 ggcaacaacaacttcatccagaccatggcgaggggcaactacccgccgtacgggcgggac 17399 Query: 372 ttcgccggcggc 383 |||||||||||| Sbjct: 17398 ttcgccggcggc 17387
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 75826 tacggcatcgacttccccggcggc 75849 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 53705 tacggcatcgacttccccggcggc 53728
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 12311 tacggcatcgacttccccggcggc 12334
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaac 317 |||| |||||||||||||||| ||||| ||||||| Sbjct: 184 ttcagcttcggcgactcgctgacggacaccggcaac 219
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full insert sequence Length = 1520 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaac 317 |||| |||||||||||||||| ||||| ||||||| Sbjct: 181 ttcagcttcggcgactcgctgacggacaccggcaac 216
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gtagctactagctagctaga 137 |||||||||||||||||||| Sbjct: 108558 gtagctactagctagctaga 108539
>dbj|AK107173.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G06, full insert sequence Length = 1183 Score = 40.1 bits (20), Expect = 5.8 Identities = 77/96 (80%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||||||||| || ||||| ||||||||||||| |||| | || ||||| | | | Sbjct: 155 ttcggcgactccacggcggacacgggcaacaacaacttcatccagaccatggcgaggggc 214 Query: 348 aactacccgccctacggcatcgacttcgccggcggc 383 ||||||||||| ||||| ||||||||||||||| Sbjct: 215 aactacccgccgtacgggcgggacttcgccggcggc 250
>dbj|AK101883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070K23, full insert sequence Length = 1397 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 tacggcatcgacttcgccggcggc 383 ||||||||||||||| |||||||| Sbjct: 220 tacggcatcgacttccccggcggc 243
>dbj|AK064681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A05, full insert sequence Length = 1385 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 336 ctggcgcgcgccaactacccgccctacggcatcgacttcgccggcggc 383 |||| ||||||| || || ||||||||||| ||||||| |||||||| Sbjct: 224 ctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggc 271
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full insert sequence Length = 1577 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaac 317 |||| |||||||||||||||| ||||| ||||||| Sbjct: 184 ttcagcttcggcgactcgctgacggacaccggcaac 219
>dbj|AK060667.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-E01, full insert sequence Length = 1191 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 agctagctagagcctagagc 146 |||||||||||||||||||| Sbjct: 1061 agctagctagagcctagagc 1042
>dbj|AK060625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G08, full insert sequence Length = 1443 Score = 40.1 bits (20), Expect = 5.8 Identities = 71/88 (80%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| |||||||| || ||| ||||||||||||||| |||| |||||| | || Sbjct: 289 ttcggtgactcgctcgtcgacgccggcaacaacaactatctcgtctccctgtccaaggca 348 Query: 348 aactacccgccctacggcatcgacttcg 375 |||||||| || ||||||||||||||| Sbjct: 349 aactacccaccaaacggcatcgacttcg 376
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full insert sequence Length = 1691 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 282 ttcatcttcggcgactcgctggtggacaacggcaac 317 |||| |||||||||||||||| ||||| ||||||| Sbjct: 444 ttcagcttcggcgactcgctgacggacaccggcaac 479
>gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56 of 118 of the complete sequence Length = 253101 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tccatatccacttccacttc 63 |||||||||||||||||||| Sbjct: 62809 tccatatccacttccacttc 62790
>gb|U46933.1|AAU46933 Avian adenovirus CELO, complete genome Length = 43804 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 51 ccacttccacttctctctcctcctcgtccatc 82 |||||||||||||| ||||||||| |||||| Sbjct: 23122 ccacttccacttcttcctcctcctcttccatc 23153
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 40.1 bits (20), Expect = 5.8 Identities = 71/88 (80%) Strand = Plus / Plus Query: 288 ttcggcgactcgctggtggacaacggcaacaacaactacatcgtgtccctggcgcgcgcc 347 ||||| |||||||| || ||| ||||||||||||||| |||| |||||| | || Sbjct: 76750 ttcggtgactcgctcgtcgacgccggcaacaacaactatctcgtctccctgtccaaggca 76809 Query: 348 aactacccgccctacggcatcgacttcg 375 |||||||| || ||||||||||||||| Sbjct: 76810 aactacccaccaaacggcatcgacttcg 76837
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gtagctactagctagctaga 137 |||||||||||||||||||| Sbjct: 1089897 gtagctactagctagctaga 1089916 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,358,266 Number of Sequences: 3902068 Number of extensions: 2358266 Number of successful extensions: 71517 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 68835 Number of HSP's gapped (non-prelim): 2676 length of query: 431 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 409 effective length of database: 17,147,199,772 effective search space: 7013204706748 effective search space used: 7013204706748 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
