ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet27c03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 204 bits (103), Expect = 2e-49 Identities = 190/219 (86%) Strand = Plus / Minus Query: 190 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcacggcgaca 249 ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||| Sbjct: 6192145 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 6192086 Query: 250 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 309 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 6192085 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 6192026 Query: 310 acttcctcctctccctctccgccgcgccgcgcgcgtccccggcgccgtccgtgtcccagt 369 ||||| ||||||| ||| |||| ||| || ||| | ||||||||||| ||||| |||| Sbjct: 6192025 acttcgtcctctcgctcgccgcgccgctgcaggcggcgccggcgccgtcggtgtcgcagt 6191966 Query: 370 ggtggagcagcatccaccagctgtacctctccaaggcgg 408 ||||| | || || |||| |||||||||||||||||||| Sbjct: 6191965 ggtggggtagtattcaccggctgtacctctccaaggcgg 6191927 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 227 cggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgcttcacggc 286 |||||||||||| ||||||||| |||||| || || | |||||||| |||| | | Sbjct: 6210475 cggcgccgtgctcggcggcgacattcccgtcaccctcgtgtggtacgggaagttcaagcc 6210534 Query: 287 ggcgcagaaggccatcgtctccgacttcctcctctccctc 326 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 6210535 ggcgcagaaggccatcgtcgtcgacttcctcctctccctc 6210574
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 204 bits (103), Expect = 2e-49 Identities = 190/219 (86%) Strand = Plus / Minus Query: 190 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcacggcgaca 249 ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||| Sbjct: 105964 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 105905 Query: 250 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 309 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 105904 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 105845 Query: 310 acttcctcctctccctctccgccgcgccgcgcgcgtccccggcgccgtccgtgtcccagt 369 ||||| ||||||| ||| |||| ||| || ||| | ||||||||||| ||||| |||| Sbjct: 105844 acttcgtcctctcgctcgccgcgccgctgcaggcggcgccggcgccgtcggtgtcgcagt 105785 Query: 370 ggtggagcagcatccaccagctgtacctctccaaggcgg 408 ||||| | || || |||| |||||||||||||||||||| Sbjct: 105784 ggtggggtagtattcaccggctgtacctctccaaggcgg 105746 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 227 cggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgcttcacggc 286 |||||||||||| ||||||||| |||||| || || | |||||||| |||| | | Sbjct: 124294 cggcgccgtgctcggcggcgacattcccgtcaccctcgtgtggtacgggaagttcaagcc 124353 Query: 287 ggcgcagaaggccatcgtctccgacttcctcctctccctc 326 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 124354 ggcgcagaaggccatcgtcgtcgacttcctcctctccctc 124393
>gb|AY570727.1| Oryza sativa (japonica cultivar-group) putative phi-1-like phosphate-induced protein mRNA, partial cds Length = 874 Score = 204 bits (103), Expect = 2e-49 Identities = 190/219 (86%) Strand = Plus / Plus Query: 190 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcacggcgaca 249 ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||| Sbjct: 154 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 213 Query: 250 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 309 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 214 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 273 Query: 310 acttcctcctctccctctccgccgcgccgcgcgcgtccccggcgccgtccgtgtcccagt 369 ||||| ||||||| ||| |||| ||| || ||| | ||||||||||| ||||| |||| Sbjct: 274 acttcgtcctctcgctcgccgcgccgctgcaggcggcgccggcgccgtcggtgtcgcagt 333 Query: 370 ggtggagcagcatccaccagctgtacctctccaaggcgg 408 ||||| | || || |||| |||||||||||||||||||| Sbjct: 334 ggtggggtagtattcaccggctgtacctctccaaggcgg 372
>ref|XM_467877.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1222 Score = 180 bits (91), Expect = 2e-42 Identities = 174/201 (86%), Gaps = 3/201 (1%) Strand = Plus / Plus Query: 210 caactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctgg 269 ||||||||||||||||||||| ||||| ||| |||||||||||||| || ||| ||||| Sbjct: 219 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 278 Query: 270 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 329 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 279 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 338 Query: 330 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 389 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 339 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 395 Query: 390 ctgtacctctccaaggcggcg 410 |||||||| |||||||||||| Sbjct: 396 ctgtacctgtccaaggcggcg 416
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 180 bits (91), Expect = 2e-42 Identities = 174/201 (86%), Gaps = 3/201 (1%) Strand = Plus / Minus Query: 210 caactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctgg 269 ||||||||||||||||||||| ||||| ||| |||||||||||||| || ||| ||||| Sbjct: 31860043 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 31859984 Query: 270 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 329 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 31859983 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 31859924 Query: 330 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 389 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 31859923 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 31859867 Query: 390 ctgtacctctccaaggcggcg 410 |||||||| |||||||||||| Sbjct: 31859866 ctgtacctgtccaaggcggcg 31859846 Score = 63.9 bits (32), Expect = 4e-07 Identities = 151/190 (79%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 219 taccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgc 278 ||||||| |||||||||||| || ||| ||||||| || ||| || |||||||||| Sbjct: 31854610 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 31854551 Query: 279 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 338 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 31854550 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 31854491 Query: 339 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 398 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 31854490 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 31854434 Query: 399 tccaaggcgg 408 |||||||||| Sbjct: 31854433 tccaaggcgg 31854424 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Minus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 31843545 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 31843486 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 31843485 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 31843426 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 31843425 ccggcgcgccg 31843415 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 315 ctcctctccctctccgccgcgccgcgcgc 343 |||||||||||| |||||||||||||||| Sbjct: 11756274 ctcctctccctcgccgccgcgccgcgcgc 11756302
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 180 bits (91), Expect = 2e-42 Identities = 174/201 (86%), Gaps = 3/201 (1%) Strand = Plus / Minus Query: 210 caactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctgg 269 ||||||||||||||||||||| ||||| ||| |||||||||||||| || ||| ||||| Sbjct: 21044 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 20985 Query: 270 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 329 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 20984 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 20925 Query: 330 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 389 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 20924 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 20868 Query: 390 ctgtacctctccaaggcggcg 410 |||||||| |||||||||||| Sbjct: 20867 ctgtacctgtccaaggcggcg 20847 Score = 63.9 bits (32), Expect = 4e-07 Identities = 151/190 (79%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 219 taccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgc 278 ||||||| |||||||||||| || ||| ||||||| || ||| || |||||||||| Sbjct: 15611 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 15552 Query: 279 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 338 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 15551 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 15492 Query: 339 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 398 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 15491 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 15435 Query: 399 tccaaggcgg 408 |||||||||| Sbjct: 15434 tccaaggcgg 15425 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Minus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 4546 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 4487 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 4486 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 4427 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 4426 ccggcgcgccg 4416
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 180 bits (91), Expect = 2e-42 Identities = 174/201 (86%), Gaps = 3/201 (1%) Strand = Plus / Minus Query: 210 caactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctgg 269 ||||||||||||||||||||| ||||| ||| |||||||||||||| || ||| ||||| Sbjct: 155841 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 155782 Query: 270 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 329 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 155781 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 155722 Query: 330 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 389 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 155721 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 155665 Query: 390 ctgtacctctccaaggcggcg 410 |||||||| |||||||||||| Sbjct: 155664 ctgtacctgtccaaggcggcg 155644 Score = 63.9 bits (32), Expect = 4e-07 Identities = 151/190 (79%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 219 taccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgc 278 ||||||| |||||||||||| || ||| ||||||| || ||| || |||||||||| Sbjct: 150408 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 150349 Query: 279 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 338 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 150348 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 150289 Query: 339 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 398 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 150288 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 150232 Query: 399 tccaaggcgg 408 |||||||||| Sbjct: 150231 tccaaggcgg 150222 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Minus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 139343 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 139284 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 139283 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 139224 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 139223 ccggcgcgccg 139213
>dbj|AK063605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C09, full insert sequence Length = 1222 Score = 180 bits (91), Expect = 2e-42 Identities = 174/201 (86%), Gaps = 3/201 (1%) Strand = Plus / Plus Query: 210 caactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctgg 269 ||||||||||||||||||||| ||||| ||| |||||||||||||| || ||| ||||| Sbjct: 219 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 278 Query: 270 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 329 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 279 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 338 Query: 330 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 389 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 339 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 395 Query: 390 ctgtacctctccaaggcggcg 410 |||||||| |||||||||||| Sbjct: 396 ctgtacctgtccaaggcggcg 416
>dbj|AK099621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053E02, full insert sequence Length = 837 Score = 161 bits (81), Expect = 2e-36 Identities = 120/133 (90%) Strand = Plus / Minus Query: 190 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcacggcgaca 249 ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||| Sbjct: 568 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 509 Query: 250 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 309 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 508 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 449 Query: 310 acttcctcctctc 322 ||||| ||||||| Sbjct: 448 acttcgtcctctc 436
>dbj|AK061401.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G10, full insert sequence Length = 962 Score = 157 bits (79), Expect = 3e-35 Identities = 160/187 (85%) Strand = Plus / Plus Query: 222 cacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgcttc 281 ||||| |||||||||||| ||||||||||||||| || |||||||||||||||| ||| Sbjct: 1 cacaatggcgccgtgctgagcggcgacatccccgtgtcgatcctctggtacggccggttc 60 Query: 282 acggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgcgc 341 ||| |||||||||||||| ||||| |||||||| ||||||| ||| |||| ||| || Sbjct: 61 acgccggcgcagaaggccgtcgtcaccgacttcgtcctctcgctcgccgcgccgctgcag 120 Query: 342 gcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctctcc 401 ||| | ||||||||||| ||||| ||||||||| | || || |||| ||||||||||||| Sbjct: 121 gcggcgccggcgccgtcggtgtcgcagtggtggggtagtattcaccggctgtacctctcc 180 Query: 402 aaggcgg 408 ||||||| Sbjct: 181 aaggcgg 187
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 227 cggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgcttcacggc 286 |||||||||||| ||||||||| |||||| || || | |||||||| |||| | | Sbjct: 4551 cggcgccgtgctcggcggcgacattcccgtcaccctcgtgtggtacgggaagttcaagcc 4610 Query: 287 ggcgcagaaggccatcgtctccgacttcctcctctccctc 326 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 4611 ggcgcagaaggccatcgtcgtcgacttcctcctctccctc 4650
>ref|XM_467876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1193 Score = 63.9 bits (32), Expect = 4e-07 Identities = 151/190 (79%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 219 taccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgc 278 ||||||| |||||||||||| || ||| ||||||| || ||| || |||||||||| Sbjct: 237 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 296 Query: 279 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 338 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 297 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 356 Query: 339 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 398 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 357 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 413 Query: 399 tccaaggcgg 408 |||||||||| Sbjct: 414 tccaaggcgg 423
>dbj|AK062900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F03, full insert sequence Length = 1193 Score = 63.9 bits (32), Expect = 4e-07 Identities = 151/190 (79%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 219 taccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctctggtacggccgc 278 ||||||| |||||||||||| || ||| ||||||| || ||| || |||||||||| Sbjct: 237 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 296 Query: 279 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 338 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 297 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 356 Query: 339 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 398 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 357 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 413 Query: 399 tccaaggcgg 408 |||||||||| Sbjct: 414 tccaaggcgg 423
>ref|XM_506983.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.37-2 mRNA Length = 1129 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 211 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 270 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 271 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 330 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 331 ccggcgcgccg 341
>ref|XM_467873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1127 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 209 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 268 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 269 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 328 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 329 ccggcgcgccg 339
>ref|XM_467872.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 210 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 269 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 270 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 329 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 330 ccggcgcgccg 340
>dbj|AK119695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C06, full insert sequence Length = 1110 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 210 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 269 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 270 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 329 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 330 ccggcgcgccg 340
>dbj|AK101655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057F02, full insert sequence Length = 1128 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 211 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 270 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 271 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 330 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 331 ccggcgcgccg 341
>dbj|AK063454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G05, full insert sequence Length = 1127 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 208 accaactcacgtaccacaacggcgccgtgctgcacggcgacatccccgtctccgtcctct 267 |||| |||||||||||| ||||| |||||| ||||||||||| || ||| |||||| Sbjct: 209 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 268 Query: 268 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 327 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 269 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 328 Query: 328 ccgccgcgccg 338 ||| ||||||| Sbjct: 329 ccggcgcgccg 339
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 ggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgc 339 ||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 17962 ggcgcagaaggccatcgtcgttaacttcctcctctccctcacggccacgccgc 18014
>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11, complete sequence Length = 98103 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 ggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgc 339 ||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 54889 ggcgcagaaggccatcgtcgttaacttcctcctctccctcacggccacgccgc 54941
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 ggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgc 339 ||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 19689888 ggcgcagaaggccatcgtcgttaacttcctcctctccctcacggccacgccgc 19689940
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 315 ctcctctccctctccgccgcgccgcgcgc 343 |||||||||||| |||||||||||||||| Sbjct: 64164 ctcctctccctcgccgccgcgccgcgcgc 64192
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 334 cgccgcgcgcgtccccggcgccg 356 ||||||||||||||||||||||| Sbjct: 86700 cgccgcgcgcgtccccggcgccg 86678
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 334 cgccgcgcgcgtccccggcgccg 356 ||||||||||||||||||||||| Sbjct: 24609798 cgccgcgcgcgtccccggcgccg 24609776 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 13024258 ctccctctccgccgcgccgc 13024277
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 gccgtgctgcacggcgacatccc 253 ||||||||||||||||||||||| Sbjct: 254540 gccgtgctgcacggcgacatccc 254518 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 acggcgccgtgctgcacggc 245 |||||||||||||||||||| Sbjct: 2929636 acggcgccgtgctgcacggc 2929617
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 334 cgccgcgcgcgtccccggcgccg 356 ||||||||||||||||||||||| Sbjct: 24921468 cgccgcgcgcgtccccggcgccg 24921446 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 13104437 ctccctctccgccgcgccgc 13104456
>ref|XM_483034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 264 ctctggtacggccgcttcacggcggcgcag 293 |||||||||||||||||||| |||||||| Sbjct: 205 ctctggtacggccgcttcaccccggcgcag 234
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tcctcctctccctctccgccgcgccg 338 |||||||||||| ||||||||||||| Sbjct: 7860525 tcctcctctccccctccgccgcgccg 7860550 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 328 ccgccgcgccgcgcgcgtccccggcgccg 356 |||||||||||| |||||||||||||||| Sbjct: 7084609 ccgccgcgccgc-cgcgtccccggcgccg 7084582
>emb|AL080251.23|HSDJ93P18 Human DNA sequence from clone RP1-93P18 on chromosome 1p35.2-36.23 Contains the 5' end of the ALDH4A1 gene for aldehyde dehydrogenase 4 family, member A1, a novel gene and a CpG island, complete sequence Length = 103216 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 tgttcctggtccagccccagcc 205 |||||||||||||||||||||| Sbjct: 90519 tgttcctggtccagccccagcc 90540
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 264 ctctggtacggccgcttcacggcggcgcag 293 |||||||||||||||||||| |||||||| Sbjct: 23963195 ctctggtacggccgcttcaccccggcgcag 23963166 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 22765819 acttcctcctctccctctcc 22765838
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tcctcctctccctctccgccgcgccg 338 |||||||||||| ||||||||||||| Sbjct: 7858360 tcctcctctccccctccgccgcgccg 7858385 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 328 ccgccgcgccgcgcgcgtccccggcgccg 356 |||||||||||| |||||||||||||||| Sbjct: 7082504 ccgccgcgccgc-cgcgtccccggcgccg 7082477 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 24737596 ctccctctccgccgcgccgc 24737615
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tcctcctctccctctccgccgcgccg 338 |||||||||||| ||||||||||||| Sbjct: 46123 tcctcctctccccctccgccgcgccg 46148
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 264 ctctggtacggccgcttcacggcggcgcag 293 |||||||||||||||||||| |||||||| Sbjct: 96346 ctctggtacggccgcttcaccccggcgcag 96317
>dbj|AK121154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O05, full insert sequence Length = 1956 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tcctcctctccctctccgccgcgccg 338 |||||||||||| ||||||||||||| Sbjct: 254 tcctcctctccccctccgccgcgccg 279
>dbj|AK073011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I01, full insert sequence Length = 922 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 264 ctctggtacggccgcttcacggcggcgcag 293 |||||||||||||||||||| |||||||| Sbjct: 205 ctctggtacggccgcttcaccccggcgcag 234
>gb|DQ333338.1| Oryza sativa (japonica cultivar-group) UDP-glucuronic acid 4-epimerase isoform 1 mRNA, complete cds Length = 1455 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tcctcctctccctctccgccgcgccg 338 |||||||||||| ||||||||||||| Sbjct: 191 tcctcctctccccctccgccgcgccg 216
>gb|BC025264.1| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone IMAGE:5087992), partial cds Length = 1763 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1473 cctcctcctcctcctggcgct 1453
>gb|BC016920.2| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone IMAGE:3853372), partial cds Length = 2683 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1353 cctcctcctcctcctggcgct 1333
>gb|BC003681.1| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone IMAGE:3453235), partial cds Length = 2952 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1610 cctcctcctcctcctggcgct 1590
>ref|XM_525419.1| PREDICTED: Pan troglodytes YTH domain family 1 (LOC470035), mRNA Length = 3021 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1540 cctcctcctcctcctggcgct 1520
>ref|NM_193227.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1089 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cctctccgccgcgccgcgcgc 343 ||||||||||||||||||||| Sbjct: 318 cctctccgccgcgccgcgcgc 298
>gb|AC133946.3| Mus musculus BAC clone RP24-188D7 from chromosome 17, complete sequence Length = 170090 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 agaagcctcctcctcctcctg 119 ||||||||||||||||||||| Sbjct: 118686 agaagcctcctcctcctcctg 118666
>ref|XM_543093.2| PREDICTED: Canis familiaris similar to YTH domain protein 1 (Dermatomyositis associated with cancer putative autoantigen-1 homolog) (DACA-1 homolog) (LOC485968), mRNA Length = 3041 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 2401 cctcctcctcctcctggcgct 2381
>ref|XM_805419.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508811.55) partial mRNA Length = 918 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcctcctcctcctcctggcgc 123 ||||||||||||||||||||| Sbjct: 449 gcctcctcctcctcctggcgc 429
>gb|AC122053.3| Mus musculus BAC clone RP24-463C3 from 3, complete sequence Length = 151640 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaagcctcctcctcctcctgg 120 ||||||||||||||||||||| Sbjct: 57812 gaagcctcctcctcctcctgg 57792
>emb|AL583863.16| Human DNA sequence from clone RP11-118G19 on chromosome 1, complete sequence Length = 113372 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 gagaagcctcctcctcctcct 118 ||||||||||||||||||||| Sbjct: 13800 gagaagcctcctcctcctcct 13820
>emb|AL096828.29|HSJ963E22 Human DNA sequence from clone RP5-963E22 on chromosome 20 Contains the C20orf21 gene for a novel protein similar to high-gluose-regulated protein 8 (HGRG8) and five CpG islands, complete sequence Length = 140152 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 111852 cctcctcctcctcctggcgct 111872
>gb|BC050284.1| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone MGC:41808 IMAGE:5298438), complete cds Length = 3265 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1936 cctcctcctcctcctggcgct 1916
>gb|AC163106.4| Mus musculus BAC clone RP23-278O13 from chromosome 3, complete sequence Length = 200512 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaagcctcctcctcctcctgg 120 ||||||||||||||||||||| Sbjct: 9177 gaagcctcctcctcctcctgg 9157
>dbj|AK095795.1| Homo sapiens cDNA FLJ38476 fis, clone FEBRA2022504, moderately similar to High-glucose-regulated protein 8 Length = 2967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1654 cctcctcctcctcctggcgct 1634
>gb|AC107222.6| Homo sapiens BAC clone RP11-616K6 from 4, complete sequence Length = 111550 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 98537 cctcctcctcctcctggcgct 98517
>gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, complete sequence Length = 183890 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gacttcctcctctccctctcc 329 ||||||||||||||||||||| Sbjct: 67361 gacttcctcctctccctctcc 67341
>gb|AC019292.10| Homo sapiens, clone RP11-23J14, complete sequence Length = 187375 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 acccttcttcctcccctcccc 87 ||||||||||||||||||||| Sbjct: 167721 acccttcttcctcccctcccc 167741
>gb|AC018437.10| Homo sapiens chromosome 8, clone RP11-77B22, complete sequence Length = 192586 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 acccttcttcctcccctcccc 87 ||||||||||||||||||||| Sbjct: 10531 acccttcttcctcccctcccc 10551
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 315 ctcctctccctctccgccgcgccgcgcgc 343 |||||||||||| ||||| |||||||||| Sbjct: 9444674 ctcctctccctcaccgccacgccgcgcgc 9444702 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 14576114 cccttcttcctcccctcccc 14576095
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cctctccgccgcgccgcgcgc 343 ||||||||||||||||||||| Sbjct: 19372333 cctctccgccgcgccgcgcgc 19372313
>gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-138H8, complete sequence Length = 172850 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gacttcctcctctccctctcc 329 ||||||||||||||||||||| Sbjct: 10974 gacttcctcctctccctctcc 10954
>dbj|AB164646.1| Oryza sativa (japonica cultivar-group) OsYSL2 mRNA for hypothetical protein, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gcctcctcctcctcctggcgc 123 ||||||||||||||||||||| Sbjct: 292 gcctcctcctcctcctggcgc 312
>gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, complete sequence Length = 204674 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 tcatgttcctggtccagccccagcc 205 ||||||||||||| ||||||||||| Sbjct: 98998 tcatgttcctggtgcagccccagcc 99022
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cctctccgccgcgccgcgcgc 343 ||||||||||||||||||||| Sbjct: 100338 cctctccgccgcgccgcgcgc 100318
>ref|NM_017798.2| Homo sapiens YTH domain family, member 1 (YTHDF1), mRNA Length = 3265 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1936 cctcctcctcctcctggcgct 1916
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 328 ccgccgcgccgcgcgcgtccccggcgccg 356 |||||||||||| |||||||||||||||| Sbjct: 109729 ccgccgcgccgc-cgcgtccccggcgccg 109756
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 315 ctcctctccctctccgccgcgccgcgcgc 343 |||||||||||| ||||| |||||||||| Sbjct: 115542 ctcctctccctcaccgccacgccgcgcgc 115570
>dbj|AB126253.1| Oryza sativa (japonica cultivar-group) OsYSL2 mRNA for YS1-like metal-nicotianamine transporter, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gcctcctcctcctcctggcgc 123 ||||||||||||||||||||| Sbjct: 292 gcctcctcctcctcctggcgc 312
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 315 ctcctctccctctccgccgcgccgcgcgc 343 |||||||||||| ||||| |||||||||| Sbjct: 26660 ctcctctccctcaccgccacgccgcgcgc 26688
>dbj|AK000398.1| Homo sapiens cDNA FLJ20391 fis, clone KAIA4640 Length = 2429 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1097 cctcctcctcctcctggcgct 1077
>emb|AL834366.1|HSM805436 Homo sapiens mRNA; cDNA DKFZp762G1112 (from clone DKFZp762G1112) Length = 2391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1057 cctcctcctcctcctggcgct 1037
>dbj|AB055518.1| Homo sapiens DACA-1 mRNA for dermatomyositis associated with cancer putative autoantigen-1, partial cds Length = 2615 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgct 124 ||||||||||||||||||||| Sbjct: 1277 cctcctcctcctcctggcgct 1257
>ref|NM_106348.3| Arabidopsis thaliana protein transporter AT1G76970 mRNA, complete cds Length = 1761 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 1258 agaagcctcctcctcctcct 1277
>gb|AC170187.2| Mus musculus BAC clone RP23-320B10 from chromosome 19, complete sequence Length = 192550 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 29457 cccttcttcctcccctcccc 29438
>gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180936 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 120975 agaagcctcctcctcctcct 120994
>ref|XM_482822.1| Oryza sativa (japonica cultivar-group), mRNA Length = 785 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 86 acttcctcctctccctctcc 105
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gctgcacggcgacatccccg 255 |||||||||||||||||||| Sbjct: 825395 gctgcacggcgacatccccg 825376
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgagcacgaggaagctcatg 185 |||||||||||||||||||| Sbjct: 684304 cgagcacgaggaagctcatg 684323
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07 map S790A, complete sequence Length = 178523 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 159822 ctccctctccgccgcgccgc 159803
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 96155 ctccctctccgccgcgccgc 96174
>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence Length = 166093 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 aacccttcttcctcccctccccaa 89 ||||||| |||||||||||||||| Sbjct: 119193 aaccctttttcctcccctccccaa 119216
>ref|XM_580915.2| PREDICTED: Bos taurus similar to YTH domain family 1 (LOC538525), mRNA Length = 3464 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cctcctcctcctcctggcgc 123 |||||||||||||||||||| Sbjct: 2098 cctcctcctcctcctggcgc 2079
>ref|XM_594476.2| PREDICTED: Bos taurus similar to CG5359-PA (LOC516323), mRNA Length = 660 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcctcctcctcctcctggcg 122 |||||||||||||||||||| Sbjct: 47 gcctcctcctcctcctggcg 28
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cccggcgccgtccgtgtccc 366 |||||||||||||||||||| Sbjct: 84616 cccggcgccgtccgtgtccc 84597
>ref|XM_843823.1| PREDICTED: Canis familiaris similar to Ig heavy chain V-III region VH26 precursor (LOC490891), mRNA Length = 747 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tccaccagctgtacctctcc 401 |||||||||||||||||||| Sbjct: 74 tccaccagctgtacctctcc 55
>ref|XM_843752.1| PREDICTED: Canis familiaris similar to Ig heavy chain V-III region VH26 precursor (LOC607155), mRNA Length = 480 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tccaccagctgtacctctcc 401 |||||||||||||||||||| Sbjct: 152 tccaccagctgtacctctcc 133
>ref|XM_843734.1| PREDICTED: Canis familiaris similar to Ig heavy chain V-III region VH26 precursor (LOC607133), mRNA Length = 657 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tccaccagctgtacctctcc 401 |||||||||||||||||||| Sbjct: 221 tccaccagctgtacctctcc 202
>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete sequence Length = 205369 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agcctcctcctcctcctggc 121 |||||||||||||||||||| Sbjct: 49227 agcctcctcctcctcctggc 49208
>gb|AC131792.4| Mus musculus BAC clone RP24-468O15 from chromosome 19, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 53803 cccttcttcctcccctcccc 53822
>gb|AC002291.1| Arabidopsis thaliana chromosome I BAC F22K20 genomic sequence, complete sequence Length = 96642 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 42120 agaagcctcctcctcctcct 42101
>gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 5235 agaagcctcctcctcctcct 5216
>emb|CR714669.2|CNS0GEE1 Tetraodon nigroviridis full-length cDNA Length = 1356 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cgacttcctcctctccctct 327 |||||||||||||||||||| Sbjct: 987 cgacttcctcctctccctct 968
>emb|CR697998.2|CNS0G1IY Tetraodon nigroviridis full-length cDNA Length = 1785 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cgacttcctcctctccctct 327 |||||||||||||||||||| Sbjct: 1408 cgacttcctcctctccctct 1389
>gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 aacccttcttcctcccctccccaa 89 ||||||| |||||||||||||||| Sbjct: 47316 aaccctttttcctcccctccccaa 47339
>gb|BT010453.1| Arabidopsis thaliana At1g76970 mRNA, complete cds Length = 1341 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 1013 agaagcctcctcctcctcct 1032
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 agagaagcctcctcctcctcctgg 120 |||||||| ||||||||||||||| Sbjct: 2019019 agagaagcgtcctcctcctcctgg 2018996
>emb|X58339.1| H.vulgare CHS gene for chalcone synthase Length = 5230 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggcggcgcagaaggccatc 302 |||||||||||||||||||| Sbjct: 3627 cggcggcgcagaaggccatc 3646
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 agagaagcctcctcctcctcctgg 120 |||||||| ||||||||||||||| Sbjct: 109748 agagaagcgtcctcctcctcctgg 109725
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 6678 ctccctctccgccgcgccgc 6659
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 cggcgccgtgctgcacggcgacat 250 |||||||| ||||||||||||||| Sbjct: 82046 cggcgccgcgctgcacggcgacat 82069
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggcgccgtgctgcacggcga 247 |||||||||||||||||||| Sbjct: 110264 ggcgccgtgctgcacggcga 110245
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 cggcgccgtgctgcacggcgacat 250 |||||||| ||||||||||||||| Sbjct: 5091 cggcgccgcgctgcacggcgacat 5114
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggcgccgtgctgcacggcga 247 |||||||||||||||||||| Sbjct: 223257 ggcgccgtgctgcacggcga 223238
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 cggcgccgtgctgcacggcgacat 250 |||||||| ||||||||||||||| Sbjct: 312733 cggcgccgcgctgcacggcgacat 312710
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggcgccgtgctgcacggcga 247 |||||||||||||||||||| Sbjct: 206509 ggcgccgtgctgcacggcga 206490
>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5' end of the Slc36a3 gene for solute carrier family 36 (proton/amino acid symporter) member 3, two novel genes, the Tramd1 gene for tramdorin 1 (transmembrane domain rich protein), the Slc36a1 gene for solute carrier family 36 (proton/amino acid symporter) member 1 and the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, complete sequence Length = 188782 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 134527 acttcctcctctccctctcc 134546
>emb|AJ245997.1|XCA245997 Xanthomonas campestris rpfD, ORF1, ORF2, ORF3, ORF4, recJ, rpfE and greA genes Length = 8165 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ctcctggcgctaatggcgct 133 |||||||||||||||||||| Sbjct: 2909 ctcctggcgctaatggcgct 2928
>gb|AC022825.9| Homo sapiens chromosome 8, clone RP11-88J22, complete sequence Length = 191772 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 70188 acttcctcctctccctctcc 70207
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cggcgccgtgctgcacggcg 246 |||||||||||||||||||| Sbjct: 3753677 cggcgccgtgctgcacggcg 3753696
>gb|AC107018.3| Homo sapiens 12 BAC RP11-225C14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105375 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 8229 cccttcttcctcccctcccc 8210
>gb|AE012287.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 195 of 460 of the complete genome Length = 12903 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ctcctggcgctaatggcgct 133 |||||||||||||||||||| Sbjct: 1975 ctcctggcgctaatggcgct 1956
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 116285 ctccctctccgccgcgccgc 116304
>gb|AC098487.1| Homo sapiens BAC clone RP11-499E18 from 4, complete sequence Length = 163914 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 119566 acttcctcctctccctctcc 119585
>gb|AC098864.3| Homo sapiens BAC clone RP11-359L10 from 4, complete sequence Length = 216280 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 aaacccttcttcctcccctcccca 88 |||||||| ||||||||||||||| Sbjct: 36529 aaacccttgttcctcccctcccca 36506
>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC Library) complete sequence Length = 148984 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaagcctcctcctcctcctg 119 |||||||||||||||||||| Sbjct: 76647 gaagcctcctcctcctcctg 76666
>gb|AC151895.4| Mus musculus BAC clone RP24-323A22 from chromosome 10, complete sequence Length = 224442 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 caaatggccaagagaagcctcctc 110 |||||||||||||||||| ||||| Sbjct: 146666 caaatggccaagagaagcttcctc 146689
>dbj|AK221351.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-27-C03 Length = 1605 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 1130 agaagcctcctcctcctcct 1149
>dbj|AK046893.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930001F21 product:unclassifiable, full insert sequence Length = 2944 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 agagaagcctcctcctcctcctgg 120 |||| ||||||||||||||||||| Sbjct: 870 agagcagcctcctcctcctcctgg 893
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ctcctggcgctaatggcgct 133 |||||||||||||||||||| Sbjct: 2830548 ctcctggcgctaatggcgct 2830567
>dbj|AK018569.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030623N16 product:hypothetical protein, full insert sequence Length = 1594 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ccaaatggccaagagaagcc 105 |||||||||||||||||||| Sbjct: 1359 ccaaatggccaagagaagcc 1340
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ctccctctccgccgcgccgc 339 |||||||||||||||||||| Sbjct: 6678 ctccctctccgccgcgccgc 6659
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ctcctctccctctccgccgc 334 |||||||||||||||||||| Sbjct: 25305133 ctcctctccctctccgccgc 25305152
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 agagaagcctcctcctcctcctgg 120 |||||||| ||||||||||||||| Sbjct: 2019019 agagaagcgtcctcctcctcctgg 2018996
>emb|BX816654.1|CNS0ADCS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 529 agaagcctcctcctcctcct 548
>emb|BX815173.1|CNS0ACTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1497 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 1062 agaagcctcctcctcctcct 1081
>gb|AC026342.34| Homo sapiens 3 BAC RP11-559L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109490 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 109076 cccttcttcctcccctcccc 109057
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 agagaagcctcctcctcctcctgg 120 |||| ||||||||||||||||||| Sbjct: 89960 agagcagcctcctcctcctcctgg 89937
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gttcctggtccagccccagc 204 |||||||||||||||||||| Sbjct: 6750090 gttcctggtccagccccagc 6750071
>gb|AC012493.9| Homo sapiens BAC clone RP11-292K15 from 2, complete sequence Length = 170404 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 ccgcgcgcgtccccggcgccgtcc 359 ||||||||||||||| |||||||| Sbjct: 126758 ccgcgcgcgtccccgccgccgtcc 126781
>gb|AC027242.16| Homo sapiens chromosome 8, clone RP11-678P19, complete sequence Length = 101400 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 100521 acttcctcctctccctctcc 100540
>gb|AC073610.17| Homo sapiens 12 BAC RP11-302B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104593 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 92127 agaagcctcctcctcctcct 92146
>ref|XM_578691.1| PREDICTED: Rattus norvegicus similar to Peptidylprolyl isomerase A, isoform 1 (LOC503167), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ggccatcgtctccgacttcc 315 |||||||||||||||||||| Sbjct: 540 ggccatcgtctccgacttcc 521
>gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166071 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 164475 cccttcttcctcccctcccc 164494
>dbj|AP005783.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0095H08 Length = 140777 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 89379 cccttcttcctcccctcccc 89360
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 92461 acttcctcctctccctctcc 92480
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 134613 acttcctcctctccctctcc 134632
>dbj|AK120178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033H06, full insert sequence Length = 785 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acttcctcctctccctctcc 329 |||||||||||||||||||| Sbjct: 86 acttcctcctctccctctcc 105
>dbj|AK110125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-B11, full insert sequence Length = 3706 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcctcctcctcctcctggcg 122 |||||||||||||||||||| Sbjct: 1460 gcctcctcctcctcctggcg 1441
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ccgccgcgccgcgcgcgtcc 347 |||||||||||||||||||| Sbjct: 621788 ccgccgcgccgcgcgcgtcc 621807
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 caaatggccaagagaagcctcctc 110 |||||||||||||||||| ||||| Sbjct: 197614 caaatggccaagagaagcttcctc 197591
>emb|BX936328.7| Zebrafish DNA sequence from clone CH211-11F20 in linkage group 18, complete sequence Length = 113038 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cttcctcctctccctctccg 330 |||||||||||||||||||| Sbjct: 5334 cttcctcctctccctctccg 5315
>gb|AY108210.1| Zea mays PCO096605 mRNA sequence Length = 1795 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgtccccggcgccgtccgtg 362 |||||||||||||||||||| Sbjct: 610 cgtccccggcgccgtccgtg 629
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 acggcgccgtgctgcacggc 245 |||||||||||||||||||| Sbjct: 3719988 acggcgccgtgctgcacggc 3720007
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 agagaagcctcctcctcctcctgg 120 |||||||| ||||||||||||||| Sbjct: 2018970 agagaagcgtcctcctcctcctgg 2018947
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ctcctctccctctccgccgc 334 |||||||||||||||||||| Sbjct: 25233309 ctcctctccctctccgccgc 25233328
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccaaatggccaagagaagcc 105 |||||||||||||||||||| Sbjct: 181354 ccaaatggccaagagaagcc 181373
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ctcctctccctctccgccgc 334 |||||||||||||||||||| Sbjct: 32057 ctcctctccctctccgccgc 32038
>gb|AC153418.1| Mus musculus BAC clone RP23-437E18 from 17, complete sequence Length = 211386 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 140709 cccttcttcctcccctcccc 140728
>gb|AC144858.3| Mus musculus BAC clone RP24-144F3 from 8, complete sequence Length = 185158 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 135850 agaagcctcctcctcctcct 135831
>gb|AC134327.2| Mus musculus BAC clone RP24-270O22 from 1, complete sequence Length = 152697 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 133159 agaagcctcctcctcctcct 133140
>gb|AC132365.4| Mus musculus BAC clone RP23-459M5 from 6, complete sequence Length = 162524 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 100573 cccttcttcctcccctcccc 100592
>gb|AC148014.3| Mus musculus BAC clone RP23-118N15 from 19, complete sequence Length = 222061 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 201622 cccttcttcctcccctcccc 201603
>ref|NM_025777.1| Mus musculus RIKEN cDNA 9030623N16 gene (9030623N16Rik), mRNA Length = 1594 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ccaaatggccaagagaagcc 105 |||||||||||||||||||| Sbjct: 1359 ccaaatggccaagagaagcc 1340
>gb|AC161488.7| Mus musculus chromosome 7, clone RP24-300N16, complete sequence Length = 183220 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 109168 cccttcttcctcccctcccc 109149
>gb|AC163341.5| Mus musculus BAC clone RP24-138G13 from chromosome 6, complete sequence Length = 179417 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cccttcttcctcccctcccc 87 |||||||||||||||||||| Sbjct: 288 cccttcttcctcccctcccc 307
>gb|AC025256.33| Homo sapiens 12 BAC RP11-437F8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 53829 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agaagcctcctcctcctcct 118 |||||||||||||||||||| Sbjct: 12453 agaagcctcctcctcctcct 12434
>dbj|AP003159.1| Homo sapiens genomic DNA, chromosome 1p36 clone:1024F16, complete sequence Length = 113733 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tgttcctggtccagccccag 203 |||||||||||||||||||| Sbjct: 91644 tgttcctggtccagccccag 91663 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,025,719 Number of Sequences: 3902068 Number of extensions: 5025719 Number of successful extensions: 488751 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 483182 Number of HSP's gapped (non-prelim): 5555 length of query: 410 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 388 effective length of database: 17,147,199,772 effective search space: 6653113511536 effective search space used: 6653113511536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
