ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet27b07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 844 bits (426), Expect = 0.0 Identities = 432/434 (99%) Strand = Plus / Plus Query: 20 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60 Query: 80 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 120 Query: 140 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 180 Query: 200 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 240 Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 300 Query: 320 gcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggc 379 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 301 gcctactacctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctggga 360 Query: 380 aacgtcaccggcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaa 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aacgtcaccggcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaa 420 Query: 440 cgggagcaacagtt 453 |||||||||||||| Sbjct: 421 cgggagcaacagtt 434
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 394 bits (199), Expect = e-107 Identities = 348/393 (88%), Gaps = 6/393 (1%) Strand = Plus / Plus Query: 67 catggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccct---ggc 123 |||||||||||||| || ||||||||| |||||||||| || ||||| ||| | ||| Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182 Query: 124 ggcggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcct 183 |||||||||||||||||||||||||||| | || ||||| ||||| || || |||||||| Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242 Query: 184 caacaacggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtc 243 |||||| || ||||||||||| ||||| ||||||||| |||||| |||||||||||||| Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302 Query: 244 caagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtc-cccggcaac- 301 ||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaagctcgtcgccgggcaact 362 Query: 302 tctgccggcaccgtaaccgcctactacctgtcg-tcgcaggggccgacgcacgacgagat 360 || ||||||||||| |||||||||||||||||| ||| |||| ||||||||||| |||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgttcgatgggggcgacgcacgacaagat 422 Query: 361 cgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgtt 420 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 423 cgacttcgagttcctgggcaacgtcacgggcgagccctacacgctgcacaccaacgtctt 482 Query: 421 cacgcaggggcagggccaacgggagcaacagtt 453 | | ||||||||||| | |||||||| ||||| Sbjct: 483 cgccaaggggcagggcaagcgggagcagcagtt 515
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 347 bits (175), Expect = 2e-92 Identities = 217/231 (93%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 265 ctccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 324 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 325 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 384 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 444 Query: 403 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 ||||||||||||||||||| ||||||||||||| || |||||||| ||||| Sbjct: 445 gctgcacaccaacgtgttcgcgcaggggcaggggcagcgggagcagcagtt 495
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 345 bits (174), Expect = 8e-92 Identities = 267/298 (89%) Strand = Plus / Plus Query: 141 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 316 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 375 Query: 321 cctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggca 380 |||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| | Sbjct: 376 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 435 Query: 381 acgtcaccggcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggcca 438 | || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 atgtgaccggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggcca 493
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 345 bits (174), Expect = 8e-92 Identities = 267/298 (89%) Strand = Plus / Plus Query: 141 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 306 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 Query: 321 cctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggca 380 |||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| | Sbjct: 366 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 425 Query: 381 acgtcaccggcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggcca 438 | || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 atgtgaccggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggcca 483
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 323 bits (163), Expect = 3e-85 Identities = 214/231 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| | Sbjct: 159 ctccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagat 218 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 219 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 278 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 gacggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 338 Query: 403 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 ||||||||||||||||||| || | |||||||| || |||||||| ||||| Sbjct: 339 gctgcacaccaacgtgttcgcgaaagggcaggggcagcgggagcagcagtt 389
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 299 bits (151), Expect = 4e-78 Identities = 211/231 (91%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440 Query: 403 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 ||||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 441 gctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcagtt 491
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 299 bits (151), Expect = 4e-78 Identities = 211/231 (91%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440 Query: 403 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 ||||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 441 gctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcagtt 491
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 291 bits (147), Expect = 1e-75 Identities = 210/231 (90%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 153 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 212 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||| |||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 213 caagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 272 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 273 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 332 Query: 403 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 ||||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 333 gctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcagtt 383
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 283 bits (143), Expect = 2e-73 Identities = 211/231 (91%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 309 tccggctccgggttccagtcccggcacgagtacctgttcggcaagatcgacatgcagctg 368 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 342 ||| || || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 369 cggctggtgccgggcaactccgccggcaccgtcaccgcctactacctgtcgtcgcagggc 428 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 | || ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 429 ggcg-cgcacgacgagatcgacttcgagttcctgggcaacgtgtccggcgagccctacac 487 Query: 403 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 ||||||||||||||||||||||| ||||||||| || |||||||| ||||| Sbjct: 488 gctgcacaccaacgtgttcacgcgggggcaggggcagcgggagcagcagtt 538
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 244 bits (123), Expect = 2e-61 Identities = 230/263 (87%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 194 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 253 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 254 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 312 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 |||| |||||||||||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct: 313 gcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtcgtc 372 Query: 337 gcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 396 ||||||| || |||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 373 gcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggcgagcc 432 Query: 397 ctacacgctgcacaccaacgtgt 419 |||||| ||||||||||||||| Sbjct: 433 gtacacggtgcacaccaacgtgt 455
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 228 bits (115), Expect = 1e-56 Identities = 205/231 (88%), Gaps = 3/231 (1%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || Sbjct: 292 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 351 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 342 ||||| || || |||||||| | ||||| || ||| ||| |||||||||||| ||||| Sbjct: 352 aagctggtgccaggcaactccgt-ggcacggtcaccaccttctacctgtcgtcccagggc 410 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 | || ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 411 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 469 Query: 403 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 ||||||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 470 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagtt 520
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 204 bits (103), Expect = 2e-49 Identities = 210/243 (86%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 212 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 271 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 936 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 877 Query: 272 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 331 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 876 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 817 Query: 332 tcgtcgcaggg-gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccgg 390 ||||||||||| | || ||||||||||||||||| | ||||||||||||||||| | || Sbjct: 816 tcgtcgcagggcgacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcggg 758 Query: 391 cgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaaca 450 ||||||||||||||||||||| ||||||||||||| |||| ||| || |||||||| || Sbjct: 757 cgagccctacacgctgcacacgaacgtgttcacgcgcgggcgggggcagcgggagcagca 698 Query: 451 gtt 453 ||| Sbjct: 697 gtt 695
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 204 bits (103), Expect = 2e-49 Identities = 210/243 (86%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 212 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 271 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 268 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 327 Query: 272 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 331 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 328 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 387 Query: 332 tcgtcgcaggg-gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccgg 390 ||||||||||| | || ||||||||||||||||| | ||||||||||||||||| | || Sbjct: 388 tcgtcgcagggcgacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcggg 446 Query: 391 cgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaaca 450 ||||||||||||||||||||| ||||||||||||| |||| ||| || |||||||| || Sbjct: 447 cgagccctacacgctgcacacgaacgtgttcacgcgcgggcgggggcagcgggagcagca 506 Query: 451 gtt 453 ||| Sbjct: 507 gtt 509
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 196 bits (99), Expect = 4e-47 Identities = 249/299 (83%) Strand = Plus / Plus Query: 155 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 214 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 204 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 263 Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 264 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 323 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 |||||||||||||||||||| || |||| ||||||||||| || ||| ||| || ||| Sbjct: 324 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 383 Query: 335 tcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgag 394 |||||||| || |||||||||||||||||||||||||||||| |||| | ||| ||| Sbjct: 384 tcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggggag 443 Query: 395 ccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 || |||||| ||||||| ||||||| || |||||| ||||| |||||||| ||||| Sbjct: 444 ccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagtt 502
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 196 bits (99), Expect = 4e-47 Identities = 249/299 (83%) Strand = Plus / Plus Query: 155 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 214 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 211 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 270 Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 271 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 330 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 |||||||||||||||||||| || |||| ||||||||||| || ||| ||| || ||| Sbjct: 331 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 390 Query: 335 tcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgag 394 |||||||| || |||||||||||||||||||||||||||||| |||| | ||| ||| Sbjct: 391 tcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggggag 450 Query: 395 ccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagtt 453 || |||||| ||||||| ||||||| || |||||| ||||| |||||||| ||||| Sbjct: 451 ccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagtt 509
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 190 bits (96), Expect = 3e-45 Identities = 165/188 (87%) Strand = Plus / Minus Query: 141 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 28773916 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 28773857 Query: 321 cctactac 328 |||||||| Sbjct: 28773856 cctactac 28773849 Score = 161 bits (81), Expect = 2e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 389 |||||||||||||||||||||| || ||||||||||||||||||||||| || || |||| Sbjct: 28773772 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 28773713 Query: 390 gcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggcca 438 | ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 28773712 gggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggcca 28773664 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 389 ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 28749954 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 28750013 Query: 390 gcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaac 449 ||||||| |||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 28750014 gcgagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagc 28750073 Query: 450 agtt 453 |||| Sbjct: 28750074 agtt 28750077 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 28749713 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 28749772 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 28749773 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 28761428 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 28761487 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 28761488 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 28761546 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 28761547 gcagatcaagctcgtccccggcaactccgccggcaccgt 28761585 Score = 109 bits (55), Expect = 8e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 388 ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 28761748 Query: 389 ggcgagccctacacgctgcacaccaacgtgt 419 |||||||| |||||| ||||||||||||||| Sbjct: 28761749 ggcgagccgtacacggtgcacaccaacgtgt 28761779 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 408 |||||||||| | ||||||||||||||||||||||| | ||||||||| ||| |||||| Sbjct: 28754713 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 28754772 Query: 409 caccaac 415 ||||||| Sbjct: 28754773 caccaac 28754779 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||||||||||||||||||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaac 13230434 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 cgacgagatcgacttcgagttcctgggcaac 382 ||||||| | ||||||||||||||||||||| Sbjct: 4973855 cgacgagctggacttcgagttcctgggcaac 4973825 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 cgacgagatcgacttcgagttcctgggcaac 382 ||||||| | ||||||||||||||||||||| Sbjct: 4958743 cgacgagctggacttcgagttcctgggcaac 4958713 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 296 ggcaactctgccggcaccgtaaccgcctactac 328 |||||||| ||||||||||| ||| |||||||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 190 bits (96), Expect = 3e-45 Identities = 165/188 (87%) Strand = Plus / Minus Query: 141 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 81691 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 81632 Query: 321 cctactac 328 |||||||| Sbjct: 81631 cctactac 81624 Score = 161 bits (81), Expect = 2e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 389 |||||||||||||||||||||| || ||||||||||||||||||||||| || || |||| Sbjct: 81547 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 81488 Query: 390 gcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggcca 438 | ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 81487 gggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggcca 81439 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 389 ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 57729 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 57788 Query: 390 gcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaac 449 ||||||| |||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 57789 gcgagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagc 57848 Query: 450 agtt 453 |||| Sbjct: 57849 agtt 57852 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 57488 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 57547 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 57548 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 69203 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 69262 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 69263 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 69321 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 69322 gcagatcaagctcgtccccggcaactccgccggcaccgt 69360 Score = 109 bits (55), Expect = 8e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 388 ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 69523 Query: 389 ggcgagccctacacgctgcacaccaacgtgt 419 |||||||| |||||| ||||||||||||||| Sbjct: 69524 ggcgagccgtacacggtgcacaccaacgtgt 69554 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 408 |||||||||| | ||||||||||||||||||||||| | ||||||||| ||| |||||| Sbjct: 62488 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 62547 Query: 409 caccaac 415 ||||||| Sbjct: 62548 caccaac 62554
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 188 bits (95), Expect = 1e-44 Identities = 266/323 (82%) Strand = Plus / Plus Query: 131 agcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaac 190 |||||| |||| || |||||| | ||||||||||| || || || |||||||| |||||| Sbjct: 316 agcttcaacaacgatttcgacatcacctggggtgatggccgggggaagatcctaaacaac 375 Query: 191 ggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtccaagcac 250 ||||||||||| | || |||||||| ||||||||| ||||| || || || || Sbjct: 376 ggccagctcctcagcctctccctggacaaaacctccggctcagggtttcaatctaaaaac 435 Query: 251 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggc 310 |||||||||| ||||| ||||||||||| || |||||||||||||||||||| || || Sbjct: 436 cagtacctctttggcaacatcgacatgcaactgaagctcgtccccggcaactcggctgga 495 Query: 311 accgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgag 370 || || |||||||| ||||| || || ||||| || || ||||||||||||||||| ||| Sbjct: 496 acggtcaccgcctattacctatcctcacagggccctacccacgacgagatcgactttgag 555 Query: 371 ttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcacgcagggg 430 ||||| || |||||| ||||| |||||||||| |||||||||||||| ||| | |||||| Sbjct: 556 ttcctcgggaacgtctccggccagccctacaccctgcacaccaacgttttctcccagggg 615 Query: 431 cagggccaacgggagcaacagtt 453 | ||| | ||||||||||||| Sbjct: 616 aaaggcaacagggagcaacagtt 638
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 330 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 389 ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 150520 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 150579 Query: 390 gcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaac 449 ||||||| |||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 150580 gcgagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagc 150639 Query: 450 agtt 453 |||| Sbjct: 150640 agtt 150643 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 150279 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 150338 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 150339 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 161994 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 162053 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 162054 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 162112 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 162113 gcagatcaagctcgtccccggcaactccgccggcaccgt 162151 Score = 109 bits (55), Expect = 8e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 388 ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 162314 Query: 389 ggcgagccctacacgctgcacaccaacgtgt 419 |||||||| |||||| ||||||||||||||| Sbjct: 162315 ggcgagccgtacacggtgcacaccaacgtgt 162345 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 408 |||||||||| | ||||||||||||||||||||||| | ||||||||| ||| |||||| Sbjct: 155279 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 155338 Query: 409 caccaac 415 ||||||| Sbjct: 155339 caccaac 155345
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 153 bits (77), Expect = 6e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 |||||||||||| |||||||||||| |||||||||||| ||||||| |||| |||||| | Sbjct: 322 ctccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagat 381 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||||| || ||||| ||||| ||||||||||| ||| ||| |||||| ||||| ||||| Sbjct: 382 caagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtcccaggg 441 Query: 343 gccgacgcacgacgagatcgacttcgagttcct 375 || | |||||||||||||||||||||||||| Sbjct: 442 ccccaaccacgacgagatcgacttcgagttcct 474
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 135 bits (68), Expect = 1e-28 Identities = 173/208 (83%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 210 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 269 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||| | || ||||||| || || ||| ||||||| | ||| |||| Sbjct: 270 gaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggg 329 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| Sbjct: 330 agatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgt 389 Query: 403 gctgcacaccaacgtgttcacgcagggg 430 | ||||||||||||||||| |||||||| Sbjct: 390 gatgcacaccaacgtgttcgcgcagggg 417
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 135 bits (68), Expect = 1e-28 Identities = 173/208 (83%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 278 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 337 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||| | || ||||||| || || ||| ||||||| | ||| |||| Sbjct: 338 gaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggg 397 Query: 343 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 402 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| Sbjct: 398 agatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgt 457 Query: 403 gctgcacaccaacgtgttcacgcagggg 430 | ||||||||||||||||| |||||||| Sbjct: 458 gatgcacaccaacgtgttcgcgcagggg 485
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 129 bits (65), Expect = 9e-27 Identities = 155/185 (83%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||| ||||| ||||||| || ||||| ||||||||||| || ||||||||| Sbjct: 311 atcgacatgcagatcaaggtcgtccctggtaactccgccggcaccgtcacagcctactac 370 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 388 || || || ||||| |||||||||||||||||||||| |||||||| |||||||| | Sbjct: 371 ctctcctcccagggaacgacgcacgacgagatcgactttgagttccttggcaacgtttct 430 Query: 389 ggcgagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaa 448 || || || |||||| ||||||||||| ||| || ||||| ||||| | |||||||| Sbjct: 431 ggggaaccgtacacgttgcacaccaacttgtacagccagggaaagggcaaccgggagcag 490 Query: 449 cagtt 453 ||||| Sbjct: 491 cagtt 495
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 129 bits (65), Expect = 9e-27 Identities = 137/161 (85%) Strand = Plus / Plus Query: 155 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 214 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 94 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 153 Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 154 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 213 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||||||||||||| || |||| ||||||||||| Sbjct: 214 atgcagctcaagctcgtcccgggggactccgccggcaccgt 254 Score = 83.8 bits (42), Expect = 5e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 332 tcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggc 391 ||||||||||| || |||||||||||||||||||||||||||||| |||| | ||| Sbjct: 396 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 455 Query: 392 gagccctacacgctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacag 451 ||||| |||||| ||||||| ||||||| || |||||| ||||| |||||||| ||| Sbjct: 456 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 515 Query: 452 tt 453 || Sbjct: 516 tt 517
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 107 bits (54), Expect = 3e-20 Identities = 129/154 (83%) Strand = Plus / Plus Query: 300 actctgccggcaccgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgaga 359 |||| ||||||||||| ||||| |||||| |||| ||||| |||||||| |||||||||| Sbjct: 1 actccgccggcaccgtgaccgcttactacttgtcttcgcaagggccgactcacgacgaga 60 Query: 360 tcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgt 419 | ||||||||||||||||| ||| | | |||||| || |||| || ||||||||||| | Sbjct: 61 ttgacttcgagttcctggggaacctgagcggcgacccttacatcctccacaccaacgtct 120 Query: 420 tcacgcaggggcagggccaacgggagcaacagtt 453 |||| || ||| ||||| | ||||||| ||||| Sbjct: 121 tcactcaagggaagggcaacagggagcagcagtt 154
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 275 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 334 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctggg 378 || |||||||||||||||||||||||||||||| Sbjct: 335 actcggagcacgacgagatcgacttcgagttcctggg 371
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 272 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 331 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctggg 378 || |||||||||||||||||||||||||||||| Sbjct: 332 actcggagcacgacgagatcgacttcgagttcctggg 368
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 348 cgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgc 407 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| | ||| Sbjct: 32715 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgc 32656 Query: 408 acaccaacgtgttcacgcagggg 430 |||||||||||||| |||||||| Sbjct: 32655 acaccaacgtgttcgcgcagggg 32633 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 29218 Query: 410 accaac 415 |||||| Sbjct: 29219 accaac 29224 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 32995 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 32936 Query: 283 caagctcgtccccggc 298 ||||||||||||||| Sbjct: 32935 gaagctcgtccccggc 32920
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 348 cgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgc 407 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| | ||| Sbjct: 30557007 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgc 30556948 Query: 408 acaccaacgtgttcacgcagggg 430 |||||||||||||| |||||||| Sbjct: 30556947 acaccaacgtgttcgcgcagggg 30556925 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 30553510 Query: 410 accaac 415 |||||| Sbjct: 30553511 accaac 30553516 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 32180420 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 32180467 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 30557287 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 30557228 Query: 283 caagctcgtccccggc 298 ||||||||||||||| Sbjct: 30557227 gaagctcgtccccggc 30557212 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 368 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 417 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 30517006 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 30516957 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 30508361 Query: 410 accaac 415 |||||| Sbjct: 30508360 accaac 30508355 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 30508619 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 30508572
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 99.6 bits (50), Expect = 8e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 335 tc 336 || Sbjct: 341 tc 342
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 99.6 bits (50), Expect = 8e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 335 tc 336 || Sbjct: 341 tc 342
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 99.6 bits (50), Expect = 8e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 270 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 329 Query: 335 tc 336 || Sbjct: 330 tc 331
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 99.6 bits (50), Expect = 8e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 229 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 288 Query: 335 tc 336 || Sbjct: 289 tc 290
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 384 Query: 410 accaac 415 |||||| Sbjct: 385 accaac 390
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||| Sbjct: 19039 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 19092
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||| Sbjct: 27960 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 28013
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 218 aaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 277 |||| ||| ||||| || ||| |||| | ||||||||| || || || |||||||| ||| Sbjct: 207 aaggcctcgggctcgggcttcgagtctacgcacgagtatctatttggtaagatcgatatg 266 Query: 278 cagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcg 337 ||||||||||| ||||| || || |||||||||||||| || || || || || || || Sbjct: 267 cagctcaagctggtccctggaaattctgccggcaccgttactgcttattatctttcatca 326 Query: 338 caggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccc 397 || ||||| || || || |||||||||||||||||||| || || ||| ||| || || Sbjct: 327 caagggcctacccatgatgagatcgacttcgagttcctcggaaatctcagcggagacccg 386 Query: 398 tacacgctgcacaccaacgtgttcac 423 ||||| ||||||| ||||||||||| Sbjct: 387 tacacattgcacactaacgtgttcac 412
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagggg 343 ||||||||| |||| |||| || |||||||| || |||| |||||||||||||||| Sbjct: 297 aagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgcagaac 356 Query: 344 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 403 || ||||||||||||||||| |||||||||||||||| || || ||||||||| Sbjct: 357 tcggagcacgacgagatcgactccgagttcctgggcaaccggacggggcagccctacatc 416 Query: 404 ctgcacaccaacgtgttcac 423 ||||| |||||||||||||| Sbjct: 417 ctgcagaccaacgtgttcac 436
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagggg 343 ||||||||||| |||||||| || || ||||| ||| | | |||| |||| || || ||| Sbjct: 8 aagctcgtcccgggcaactccgctggtaccgttaccacattctacttgtcttcccaaggg 67 Query: 344 ccgacgcacgacgagatcgacttcgagttcctgggcaac 382 |||| ||||||||||||||||||||||||||||||||| Sbjct: 68 ccgaatcacgacgagatcgacttcgagttcctgggcaac 106
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 277 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 251 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| |||| |||| |||||||| || ||||||| |||||||||||||||| Sbjct: 324 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 383 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctggg 378 || ||||||||||||||||||||||||| |||| Sbjct: 384 actcggagcacgacgagatcgacttcgagttcttggg 420
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 341 ||||||||||| |||| |||| ||||||||||| ||||||| |||||||||||| ||| Sbjct: 285 tcaagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctgtcgtcacaga 344 Query: 342 ggccgacgcacgacgagatcgacttcgagttcctggg 378 || ||||||||||||||||||||||||| |||| Sbjct: 345 actcggagcacgacgagatcgacttcgagttcttggg 381
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 76109 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 76156
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 331 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 378
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 335 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 382
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 31596 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 31643
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||| | ||| | |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 346 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 405 Query: 410 accaac 415 |||||| Sbjct: 406 accaac 411
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||| | ||| | |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 8379000 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 8378941 Query: 410 accaac 415 |||||| Sbjct: 8378940 accaac 8378935 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc-gcaggg 342 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| || || | | | Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 8322016 Query: 343 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 8322017 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 8322076 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 8482431 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 8482490 Query: 410 ac 411 || Sbjct: 8482491 ac 8482492
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||| | ||| | |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 119109 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 119050 Query: 410 accaac 415 |||||| Sbjct: 119049 accaac 119044 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc-gcaggg 342 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| || || | | | Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 62125 Query: 343 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 62126 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 62185
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 293 cccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggggccgacgcac 352 ||||| || ||||| || ||||| ||| ||| |||| |||||||||| ||| ||| |||| Sbjct: 4 cccgggaattctgcggggaccgtcaccaccttctacttgtcgtcgcaagggtcgatgcac 63 Query: 353 gacgagatcgacttcgagttcctgggcaac 382 ||||||||||| ||||||||||| |||||| Sbjct: 64 gacgagatcgatttcgagttcctcggcaac 93
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacacc 412 ||||| |||||||||||||||||||| |||| ||||| |||||||||| ||||||||| Sbjct: 424 gacgaaatcgacttcgagttcctggggaacgagaccggacagccctacaccctgcacacc 483 Query: 413 aacgt 417 ||||| Sbjct: 484 aacgt 488
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 408 ||||||||||||||||||||||||||||||||||| ||||| | |||||||| | || Sbjct: 10359113 gcacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatcca 10359172 Query: 409 caccaacgt 417 ||||||||| Sbjct: 10359173 caccaacgt 10359181 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 15085618 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 15085677 Query: 410 accaac 415 ||||| Sbjct: 15085678 gccaac 15085683 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 285 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggca 380 ||||||||||||| | ||||||||||||||||||| Sbjct: 28642113 gacgcacgacgagctggacttcgagttcctgggca 28642147 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||||| |||||| | ||||||| |||||| | |||||||| | ||| Sbjct: 10363968 cacgacgagatcgactttgagttcttaggcaacgagaccggccaaccctacaccatccac 10364027 Query: 410 accaac 415 |||||| Sbjct: 10364028 accaac 10364033 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaac 382 |||||||||| | ||||||||||||||||||||| Sbjct: 1445478 gcacgacgagctggacttcgagttcctgggcaac 1445511 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 agccctacacgctgcacaccaacgt 417 |||||||||||||||| |||||||| Sbjct: 35396829 agccctacacgctgcagaccaacgt 35396805
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 73.8 bits (37), Expect = 4e-10 Identities = 107/128 (83%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg-ggccgacg--ca 351 ||||||||| ||||||||||| ||| ||| ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 352 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacac 411 ||||||||||||| |||||||| |||||||| ||| |||||| |||||| | || |||| Sbjct: 356 cgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatgaacac 415 Query: 412 caacgtgt 419 |||||||| Sbjct: 416 caacgtgt 423
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 408 ||||||||||||||||||||||||||||||||||| ||||| | |||||||| | || Sbjct: 1535 gcacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatcca 1594 Query: 409 caccaacgt 417 ||||||||| Sbjct: 1595 caccaacgt 1603 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 285 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||||| |||||| | ||||||| |||||| | |||||||| | ||| Sbjct: 6390 cacgacgagatcgactttgagttcttaggcaacgagaccggccaaccctacaccatccac 6449 Query: 410 accaac 415 |||||| Sbjct: 6450 accaac 6455
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 408 ||||||||||||||||||||||||||||||||||| ||||| | |||||||| | || Sbjct: 124923 gcacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatcca 124982 Query: 409 caccaacgt 417 ||||||||| Sbjct: 124983 caccaacgt 124991 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 285 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758
>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete cds Length = 1221 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 227 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 286 ||||| || ||||| |||||| |||| ||||| || ||||| || |||||||| ||||| Sbjct: 266 ggctcgggtttccaatccaagaacgaatacctttttggcaaaattgacatgcaactcaaa 325 Query: 287 ctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 || ||||| ||||||||||| |||||||| || |||||||| Sbjct: 326 ctagtccctggcaactctgctggcaccgtcactgcctacta 366
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | ||||||||||||| | || |||||||||||||||| || || Sbjct: 361 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 420 Query: 410 accaacgt 417 |||||||| Sbjct: 421 accaacgt 428
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | ||||||||||||| | || |||||||||||||||| || || Sbjct: 17438276 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 17438335 Query: 410 accaacgt 417 |||||||| Sbjct: 17438336 accaacgt 17438343 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | ||||||||||||| | || |||||||||||||||| || || Sbjct: 106500 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 106559 Query: 410 accaacgt 417 |||||||| Sbjct: 106560 accaacgt 106567
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 71.9 bits (36), Expect = 2e-09 Identities = 160/199 (80%), Gaps = 3/199 (1%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||| ||| |||||||| | |||||||||||||| || |||| | || | Sbjct: 221 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatg 280 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc--gcagg 341 ||||||||| ||||||||| |||||||| || ||| ||| ||||||| | || || | Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacctccttctacctgacttccggcgag 340 Query: 342 ggc-cgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 || |||| ||||||||||||||| |||||||| |||||||| || |||||| |||||| Sbjct: 341 agcgcgacccacgacgagatcgacatcgagttcatgggcaactccagcggcgacccctac 400 Query: 401 acgctgcacaccaacgtgt 419 | || |||||||||||| Sbjct: 401 gtgatgaacaccaacgtgt 419
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 396 |||| ||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 390 gcacaacgagttcgacttcgagttcctgggcaacgtgaccggcgagcc 437
>ref|XM_465430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 862 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 465 Query: 410 accaac 415 ||||| Sbjct: 466 gccaac 471
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 316 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 375 Query: 410 accaac 415 |||||| Sbjct: 376 accaac 381 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 228 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 275
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 368 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 417 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 310 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 359
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 368 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 417 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 150383 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 150334 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 141738 Query: 410 accaac 415 |||||| Sbjct: 141737 accaac 141732 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 141996 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 141949
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 368 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 417 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 382 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 431
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 91399 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 91458 Query: 410 accaac 415 ||||| Sbjct: 91459 gccaac 91464
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 368 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 417 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 400 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 449
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 379 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 438 Query: 410 accaac 415 |||||| Sbjct: 439 accaac 444 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 291 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 338
>dbj|AK063216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D12, full insert sequence Length = 862 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 465 Query: 410 accaac 415 ||||| Sbjct: 466 gccaac 471
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 251 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 320 gcctactac 328 ||||||||| Sbjct: 311 gcctactac 319
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 214 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 273 Query: 320 gcctactac 328 ||||||||| Sbjct: 274 gcctactac 282
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 251 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 320 gcctactac 328 ||||||||| Sbjct: 311 gcctactac 319
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 228 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 287 Query: 320 gcctactac 328 ||||||||| Sbjct: 288 gcctactac 296
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 65.9 bits (33), Expect = 1e-07 Identities = 106/128 (82%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg-ggccgacg--ca 351 ||||||||| ||||||||||| ||| ||| ||||||| |||| || || ||||| || Sbjct: 295 cggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacggcca 354 Query: 352 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacac 411 |||||||||||| |||||||| |||||||| ||| |||||| |||||| | || |||| Sbjct: 355 tgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatgaacac 414 Query: 412 caacgtgt 419 |||||||| Sbjct: 415 caacgtgt 422
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 65.9 bits (33), Expect = 1e-07 Identities = 91/108 (84%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg-ggccgacg--ca 351 ||||||||| ||||||||||| ||| ||| ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 352 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcccta 399 ||||||||||||| |||||||| |||||||| ||| |||||| ||||| Sbjct: 356 cgacgagatcgacatcgagttcatgggcaacctcagcggcgaccccta 403
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||||||||||||||||||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaac 147622 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 296 ggcaactctgccggcaccgtaaccgcctactac 328 |||||||| ||||||||||| ||| |||||||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 37112 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 37053 Query: 320 gcctactac 328 ||||||||| Sbjct: 37052 gcctactac 37044
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 1331 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 1390 Query: 320 gcctactac 328 ||||||||| Sbjct: 1391 gcctactac 1399
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||||||||||||||||||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaac 675 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 296 ggcaactctgccggcaccgtaaccgcctactac 328 |||||||| ||||||||||| ||| |||||||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 193 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 252 Query: 320 gcctactac 328 ||||||||| Sbjct: 253 gcctactac 261
>ref|NM_113277.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT3G23730 mRNA, complete cds Length = 1074 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>gb|AY084449.1| Arabidopsis thaliana clone 10852 mRNA, complete sequence Length = 1076 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 327 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 386 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 387 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 430
>dbj|AK175805.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A12 Length = 1084 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>dbj|AK175804.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A11 Length = 1084 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 372 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 61.9 bits (31), Expect = 2e-06 Identities = 104/126 (82%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg-ggccgacg--ca 351 ||||||||| ||||||||||| ||| ||| ||||||| |||| || || ||||| || Sbjct: 307 cggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacggcca 366 Query: 352 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacac 411 |||||||||||| |||||||| |||||||| ||| |||||| |||||| | || |||| Sbjct: 367 tgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatgaacac 426 Query: 412 caacgt 417 |||||| Sbjct: 427 caacgt 432
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||||||||||||||||||||||| Sbjct: 113473 gcacgacgagatcgacttcgagttcctggg 113502 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 113311 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||||||||||||||||||||||| Sbjct: 13092 gcacgacgagatcgacttcgagttcctggg 13121 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 12930 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||||||||||||||||||||||| Sbjct: 19010275 gcacgacgagatcgacttcgagttcctggg 19010304 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19010113 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||||||||||||||||| |||||| Sbjct: 445 gcacgacgagatcgacttcgagttccttggcaac 478
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||||||||||||||||||||||||||| Sbjct: 19168924 gcacgacgagatcgacttcgagttcctggg 19168953 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19168762 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||||||||||||||||| ||||||||||||| ||||| || || || |||||| |||| Sbjct: 261 atgcagctcaagctcgttgccggcaactctgctggcactgtcactgcttactacttgtca 320 Query: 335 tcgcaggggccgacgcacgacgagatcgacttcgagtt 372 || || ||||| || || || ||||| || |||||||| Sbjct: 321 tcccaagggccaacacatgatgagattgatttcgagtt 358
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc-gcaggg 342 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| || || | | | Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 343 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc-gcaggg 342 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| || || | | | Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 343 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc-gcaggg 342 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| || || | | | Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 339 Query: 343 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 340 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 399
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc-gcaggg 342 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| || || | | | Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 343 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc-gcaggg 342 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| || || | | | Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 343 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 400 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 212 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 271 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 331 ||||||||| ||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 319 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||||||| |||||||| |||||||| | |||||| |||||| | || || Sbjct: 341 cacgacgagatcgacatcgagttcatgggcaactcgagcggcgacccctacgtgatgaac 400 Query: 410 accaacgtgt 419 |||||||||| Sbjct: 401 accaacgtgt 410
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggca 380 ||||||||||||| | ||||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctgggca 510
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggca 380 ||||||||||||| | ||||||||||||||||||| Sbjct: 478 gacgcacgacgagctggacttcgagttcctgggca 512
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 7311670 gacgcacgacgagctggacttcgagttcctggggaacgt 7311632 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||| | |||||||||||| |||||||| Sbjct: 35691476 gacgcacgacgagctggacttcgagttcttgggcaac 35691440 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagttcct 944240
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 62926 gacgcacgacgagctggacttcgagttcctggggaacgt 62888
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 358 gatcgacttcgagtt--cctgggcaacgtcaccggcga 393 ||||||||||||||| ||||||||||||||||||||| Sbjct: 19933644 gatcgacttcgagttttcctgggcaacgtcaccggcga 19933681
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 7309565 gacgcacgacgagctggacttcgagttcctggggaacgt 7309527 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||| | |||||||||||| |||||||| Sbjct: 35781549 gacgcacgacgagctggacttcgagttcttgggcaac 35781513 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagttcct 944238
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggca 380 ||||||||||||| | ||||||||||||||||||| Sbjct: 106126 gacgcacgacgagctggacttcgagttcctgggca 106160
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggca 380 ||||||||||||| | ||||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctgggca 510
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggca 380 ||||||||||||| | ||||||||||||||||||| Sbjct: 477 gacgcacgacgagctggacttcgagttcctgggca 511
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 433 gacgcacgacgagctggacttcgagttcctggggaacgt 471
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 358 gatcgacttcgagtt--cctgggcaacgtcaccggcga 393 ||||||||||||||| ||||||||||||||||||||| Sbjct: 19859858 gatcgacttcgagttttcctgggcaacgtcaccggcga 19859895
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 358 gatcgacttcgagtt--cctgggcaacgtcaccggcga 393 ||||||||||||||| ||||||||||||||||||||| Sbjct: 93616 gatcgacttcgagttttcctgggcaacgtcaccggcga 93579
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 328 cctgtc 333 | |||| Sbjct: 276 cttgtc 281
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaac 382 |||||||||| | ||||||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctgggcaac 669
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 352 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctaca 401 ||||||| | ||||||||||||||||||||| || ||| |||||||||| Sbjct: 156 cgacgagctggacttcgagttcctgggcaaccgcagcggggagccctaca 205
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 279 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 338 Query: 328 cctgtc 333 | |||| Sbjct: 339 cttgtc 344
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaac 382 |||||||||| | ||||||||||||||||||||| Sbjct: 126750 gcacgacgagctggacttcgagttcctgggcaac 126783
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaac 382 |||||||||| | ||||||||||||||||||||| Sbjct: 8899 gcacgacgagctggacttcgagttcctgggcaac 8932
>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full insert sequence Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaac 382 |||||||||| | ||||||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctgggcaac 669
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 52.0 bits (26), Expect = 0.002 Identities = 79/96 (82%), Gaps = 3/96 (3%) Strand = Plus / Plus Query: 291 tccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgc---aggggccga 347 |||| |||||||| || |||||||| ||| ||| ||||||||||||| | ||||| Sbjct: 374 tcccgggcaactccgcgggcaccgtgacctccttctacctgtcgtcgggcgacgggcccg 433 Query: 348 cgcacgacgagatcgacttcgagttcctgggcaacg 383 |||||||||||||||| | |||||| ||||||||| Sbjct: 434 ggcacgacgagatcgacatggagttcatgggcaacg 469
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 328 cctgtc 333 | |||| Sbjct: 276 cttgtc 281
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||| | |||||||||||| |||||||| Sbjct: 456 gacgcacgacgagctggacttcgagttcttgggcaac 492
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||| | |||||||||||| |||||||| Sbjct: 89254 gacgcacgacgagctggacttcgagttcttgggcaac 89218
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||| ||| | |||||| || |||||||||||||| || || | | | | | Sbjct: 229 tccggctccggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatg 288 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 ||||||||| ||||||||| ||||||||||| ||| ||| ||| ||| |||| Sbjct: 289 aagctcgtcgacggcaactccgccggcaccgtcacctccttctatctgacgtc 341
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 95873 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 95814 Query: 328 c 328 | Sbjct: 95813 c 95813
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctgggcaa 381 |||||||||||| |||||||||||||||| Sbjct: 295 gacgagatcgacctcgagttcctgggcaa 323
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 35421 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 35362 Query: 328 c 328 | Sbjct: 35361 c 35361
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||| | |||||||||||| |||||||| Sbjct: 407 gacgcacgacgagctggacttcgagttcttgggcaac 443
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 346 gacgcacgacgagatcgacttcgagttcctgggcaac 382 ||||||||||||| | |||||||||||| |||||||| Sbjct: 460 gacgcacgacgagctggacttcgagttcttgggcaac 496
>gb|DQ449625.1| Dianthus caryophyllus endo-transglycosylase (XTH2) mRNA, partial cds Length = 716 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 365 ttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgtt 420 ||||||||||| || ||||| || || || || |||||||||||||| |||||||| Sbjct: 10 ttcgagttcctaggaaacgttacgggagaaccttacacgctgcacacgaacgtgtt 65
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgt 315 |||||| ||||||||||||| ||||||||||| Sbjct: 328 aagctcatccccggcaactccgccggcaccgt 359 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacg 383 |||||||||||||||| | |||||| ||||||||| Sbjct: 396 gcacgacgagatcgacatggagttcatgggcaacg 430
>gb|AF223419.1|AF223419 Asparagus officinalis xyloglucan endotransglycosylase XET1 (AoXET1) mRNA, complete cds Length = 1128 Score = 48.1 bits (24), Expect = 0.025 Identities = 123/156 (78%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| ||||| || |||||||| ||||| || || || ||||| || ||||| || || Sbjct: 224 ttcgggaagattgatatgcagcttaagcttgtaccggggaactccgctggcactgttact 283 Query: 320 gcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggc 379 |||||||| | || || || || || || ||||| |||||||||||||| ||||| ||| Sbjct: 284 gcctactatttatcatctcaaggaccaactcacgatgagatcgacttcgaattcctcggc 343 Query: 380 aacgtcaccggcgagccctacacgctgcacaccaac 415 ||| ||| ||||| || |||| || ||||||||| Sbjct: 344 aacctcagtggcgacccatacatcctacacaccaac 379
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 24457 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 24516
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 368 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaac 415 ||||||||||||||||||||||| | || ||||| ||||| |||||| Sbjct: 231 gagttcctgggcaacgtcaccgggcaaccgtacaccctgcataccaac 184 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 323 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 276
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgt 315 |||||| ||||||||||||| ||||||||||| Sbjct: 353 aagctcatccccggcaactccgccggcaccgt 384 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaacg 383 |||||||||||||||| | |||||| ||||||||| Sbjct: 421 gcacgacgagatcgacatggagttcatgggcaacg 455
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagttcct 99437
>ref|XM_450915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1457 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||| | |||||||||||||| |||||||| Sbjct: 404 cacgacgaggtggacttcgagttcctcggcaacgt 438
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||| | |||||||||||||| |||||||| Sbjct: 13727110 cacgacgaggtggacttcgagttcctcggcaacgt 13727076
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 cgacgagatcgacttcgagttcctgggcaac 382 ||||||| | ||||||||||||||||||||| Sbjct: 15969 cgacgagctggacttcgagttcctgggcaac 15939 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 cgacgagatcgacttcgagttcctgggcaac 382 ||||||| | ||||||||||||||||||||| Sbjct: 857 cgacgagctggacttcgagttcctgggcaac 827
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 cgacgagatcgacttcgagttcctgggcaac 382 ||||||| | ||||||||||||||||||||| Sbjct: 161338 cgacgagctggacttcgagttcctgggcaac 161308 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 cgacgagatcgacttcgagttcctgggcaac 382 ||||||| | ||||||||||||||||||||| Sbjct: 146226 cgacgagctggacttcgagttcctgggcaac 146196
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||| | |||||||||||||| |||||||| Sbjct: 125224 cacgacgaggtggacttcgagttcctcggcaacgt 125190
>dbj|AK122079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N05, full insert sequence Length = 1621 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||| | |||||||||||||| |||||||| Sbjct: 596 cacgacgaggtggacttcgagttcctcggcaacgt 630
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcct 375 ||||||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagttcct 377
>dbj|AK060495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E08, full insert sequence Length = 1457 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgt 384 ||||||||| | |||||||||||||| |||||||| Sbjct: 404 cacgacgaggtggacttcgagttcctcggcaacgt 438
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 307 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 366 Query: 410 ac 411 || Sbjct: 367 ac 368
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctgggcaac 382 |||||||||||||||| | |||||| |||||||| Sbjct: 252 gcacgacgagatcgacatggagttcatgggcaac 285
>gb|DQ382358.1| Glycine max clone pSXET1a xyloglucan endotransglycosylase precursor (XET1) mRNA, partial cds Length = 681 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 251 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggc 310 |||||| | ||||| || || ||||||||||||||||| || || || |||||||| || Sbjct: 354 gagtacttgttcggaaaaattgacatgcagctcaagcttgtgcctggtaactctgctgga 413 Query: 311 accgtaaccgccta 324 || ||||| ||||| Sbjct: 414 acagtaactgccta 427
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 98148 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 98207 Query: 410 ac 411 || Sbjct: 98208 ac 98209
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 409 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 11974 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 12033 Query: 410 ac 411 || Sbjct: 12034 ac 12035
>emb|AM179464.1| Uncultured sulfate-reducing bacterium partial dsrAB gene for sulfite reductase, dissimilatory-type alpha subunit, clone 3d_20 Length = 702 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 370 gttcctgggcaacgtcaccggcgagc 395 ||||||||||| |||||||||||||| Sbjct: 129 gttcctgggcaccgtcaccggcgagc 154
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 gcacgacgagatcgacttcgagttcctggg 378 |||||| |||||||||||||||||| |||| Sbjct: 353 gcacgatgagatcgacttcgagttcttggg 382
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 agccctacacgctgcacaccaacgt 417 |||||||||||||||| |||||||| Sbjct: 422 agccctacacgctgcagaccaacgt 446
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 gctccgggttccagtccaagcacga 252 ||||||||||||||||| ||||||| Sbjct: 90144 gctccgggttccagtcccagcacga 90120
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 cggcaagatcgacatgcagctcaag 286 ||||||||||||||||||| ||||| Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 321 cctactacctgtcgtcgcaggggccgacgcacg 353 ||||||||||| |||||||||| ||||||||| Sbjct: 3516272 cctactacctgcggtcgcagggggcgacgcacg 3516304
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 |||||||||||||| ||||||||| |||| Sbjct: 370 cacgacgagatcgatttcgagttcttggg 398
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 agccctacacgctgcacaccaacgt 417 |||||||||||||||| |||||||| Sbjct: 8350 agccctacacgctgcagaccaacgt 8326
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 agccctacacgctgcacaccaacgt 417 |||||||||||||||| |||||||| Sbjct: 57377 agccctacacgctgcagaccaacgt 57353
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 cacgacgagatcgacttcgagttcctggg 378 |||||||||||||| ||||||||| |||| Sbjct: 436 cacgacgagatcgatttcgagttcttggg 464
>ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1304 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1291 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 578416 gcgcggcaagatcctcaaca 578435
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ggctccgggttccagtccaagcac 250 ||||||||||||||| |||||||| Sbjct: 108026 ggctccgggttccagcccaagcac 108003
>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227 of 256 of the complete sequence Length = 11399 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 cggcgagcttcgacaaggagttcg 149 ||||||||||||||||||| |||| Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ggctccgggttccagtccaagcac 250 ||||||||||||||| |||||||| Sbjct: 17463 ggctccgggttccagcccaagcac 17440
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 1970047 gcgcggcaagatcctcaaca 1970028
>emb|AL354743.33| Human DNA sequence from clone RP4-785P20 on chromosome 1p36.23-36.33 Contains the 3' end of the PRDM16 gene for PR domain containing 16 and two CpG islands, complete sequence Length = 140572 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ggggcagggccaacgggagcaaca 450 ||||||||||||||||||| |||| Sbjct: 38144 ggggcagggccaacgggagaaaca 38121
>emb|X66125.1|OSPER O.sativa mRNA for peroxidase Length = 1287 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gacttcgagttcctgggcaa 381 |||||||||||||||||||| Sbjct: 3333298 gacttcgagttcctgggcaa 3333279
>emb|AJ421977.1|SMA421977 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm199 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421975.1|SMA421975 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm8 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421974.1|SMA421974 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm117 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421973.1|SMA421973 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm98 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ518827.1|RET518827 Rhizobium etli partial gdhB gene for NAD-glutamate dehydrogenase Length = 537 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gggcaacgtcaccggcgagc 395 |||||||||||||||||||| Sbjct: 309 gggcaacgtcaccggcgagc 328
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 636185 gcgcggcaagatcctcaaca 636204
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 338395 gcgcggcaagatcctcaaca 338376
>gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 179 of 460 of the complete genome Length = 10028 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 1720 gcgcggcaagatcctcaaca 1701
>gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, complete sequence Length = 174906 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gcaggggcagggccaacggg 443 |||||||||||||||||||| Sbjct: 124030 gcaggggcagggccaacggg 124049
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gggcaacgtcaccggcgagc 395 |||||||||||||||||||| Sbjct: 4350898 gggcaacgtcaccggcgagc 4350917
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 cggcgagcttcgacaaggagttcg 149 ||||||||||||||||||| |||| Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 3067621 gcgcggcaagatcctcaaca 3067640
>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial cds; and TetR family bacterial regulatory protein (ameR), membrane fusion protein (ameA), multidrug efflux transporter RND family protein (ameB), and outer membrane protein (ameC) genes, complete cds Length = 7277 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 cggcgagcttcgacaaggagttcg 149 ||||||||||||||||||| |||| Sbjct: 119 cggcgagcttcgacaaggatttcg 142
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 gacgagatcgacttcgagttcctg 376 |||||||||||||||||| ||||| Sbjct: 4194088 gacgagatcgacttcgagatcctg 4194111
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full insert sequence Length = 1287 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 5273940 gcgcggcaagatcctcaaca 5273921
>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene for class III peroxidase 111 precursor, exons 1-4 Length = 1250 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 5587812 gcgcggcaagatcctcaaca 5587793
>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 205 ggctcgcatgggggcgtcgctgct 228
>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete sequence Length = 192913 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccatccagcattctcagacc 36 |||||||||||||||||||| Sbjct: 68495 ccatccagcattctcagacc 68514
>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence Length = 219361 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccatccagcattctcagacc 36 |||||||||||||||||||| Sbjct: 56171 ccatccagcattctcagacc 56190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,611,303 Number of Sequences: 3902068 Number of extensions: 2611303 Number of successful extensions: 46671 Number of sequences better than 10.0: 196 Number of HSP's better than 10.0 without gapping: 207 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45022 Number of HSP's gapped (non-prelim): 1622 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
