ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet26g06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 551 bits (278), Expect = e-154 Identities = 335/353 (94%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 100 gagcacgaaacgcatggctcgcatgggggcgtcggtgctggtgatcctgctcgcctcttg 159 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 36 gagcacgcaacgcatggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttg 95 Query: 160 tgccctggcggcggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcgg 219 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 cgccctggcggcggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcgg 155 Query: 220 caagatcctcaacaatggccagctgctgatgctggggctggacaaggtctccggctccgg 279 ||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 156 caagatcctcaacaacggccagctcctgacgctgggactggacaaggtctccggctccgg 215 Query: 280 gttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctcaagctcgtccc 339 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 gttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccc 275 Query: 340 cggcaactccgccggcaccgtcaccgc--attacctgtcgtcgcagggtccgacgcacga 397 ||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct: 276 cggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagggtccgacgcacga 335 Query: 398 cgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgctgc 450 |||||||||||||||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 336 cgagatcgacttcgagttcctgggaaacgtcaccggcgagccctacacgctgc 388
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 345 bits (174), Expect = 8e-92 Identities = 308/347 (88%), Gaps = 8/347 (2%) Strand = Plus / Plus Query: 112 catggctcgcatgggggcgtcggtgctggtgatcctgctcgcctcttgtgccct---ggc 168 |||||||||||||| || ||||||||||| ||||||||| || ||||||||| | ||| Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182 Query: 169 ggcggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcct 228 |||||||||||||||||||||||||||| | || ||||| ||||| || || |||||||| Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242 Query: 229 caacaatggccagctgctgatgctggggctggacaaggtctccggctccgggttccagtc 288 ||||||||| ||||| |||| ||||||||||||||| |||||| |||||||||||||| Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302 Query: 289 caagcgcgagtacctcttcggcaagatcgacatgcagctcaagctcgtc-cccggcaac- 346 |||||||||||||||||||||||||||||||||||| |||||||||||| || |||||| Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaagctcgtcgccgggcaact 362 Query: 347 tccgccggcaccgtcaccgc--attacctgtcg-tcgcagggtccgacgcacgacgagat 403 |||||||||||||||||||| | ||||||||| ||| ||| ||||||||||| |||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgttcgatgggggcgacgcacgacaagat 422 Query: 404 cgacttcgagttcctgggcaacgtcacccgcgagccatacacgctgc 450 ||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 423 cgacttcgagttcctgggcaacgtcacgggcgagccctacacgctgc 469
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 266 bits (134), Expect = 6e-68 Identities = 173/185 (93%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 265 ctccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 324 Query: 328 caagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcaggg 385 ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 325 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 384 Query: 386 tccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 385 gacggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 444 Query: 446 gctgc 450 ||||| Sbjct: 445 gctgc 449
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 262 bits (132), Expect = 9e-67 Identities = 234/267 (87%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 186 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaatggccagctgc 245 ||||||||||| | |||||||| || || || |||||||||||| | |||||||||||| Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255 Query: 246 tgatgctggggctggacaaggtctccggctccgggttccagtccaagcgcgagtacctct 305 ||| ||| |||||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315 Query: 306 tcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 375 Query: 366 c--attacctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggca 423 | | ||| ||||||||||||| |||||||| || ||||||||||||||||||||||| | Sbjct: 376 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 435 Query: 424 acgtcacccgcgagccatacacgctgc 450 | || ||| | ||||| |||||||||| Sbjct: 436 atgtgaccggggagccgtacacgctgc 462
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 262 bits (132), Expect = 9e-67 Identities = 234/267 (87%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 186 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaatggccagctgc 245 ||||||||||| | |||||||| || || || |||||||||||| | |||||||||||| Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245 Query: 246 tgatgctggggctggacaaggtctccggctccgggttccagtccaagcgcgagtacctct 305 ||| ||| |||||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305 Query: 306 tcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 Query: 366 c--attacctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggca 423 | | ||| ||||||||||||| |||||||| || ||||||||||||||||||||||| | Sbjct: 366 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 425 Query: 424 acgtcacccgcgagccatacacgctgc 450 | || ||| | ||||| |||||||||| Sbjct: 426 atgtgaccggggagccgtacacgctgc 452
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 250 bits (126), Expect = 3e-63 Identities = 171/185 (92%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| | Sbjct: 159 ctccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagat 218 Query: 328 caagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcaggg 385 ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 219 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 278 Query: 386 tccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 279 gacggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 338 Query: 446 gctgc 450 ||||| Sbjct: 339 gctgc 343
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 242 bits (122), Expect = 8e-61 Identities = 170/185 (91%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 328 caagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcaggg 385 ||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 386 tccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 | |||| ||||| ||||||||||||||||||||||| ||||| ||| ||||||| ||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440 Query: 446 gctgc 450 ||||| Sbjct: 441 gctgc 445
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 242 bits (122), Expect = 8e-61 Identities = 170/185 (91%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 328 caagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcaggg 385 ||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 386 tccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 | |||| ||||| ||||||||||||||||||||||| ||||| ||| ||||||| ||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440 Query: 446 gctgc 450 ||||| Sbjct: 441 gctgc 445
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 234 bits (118), Expect = 2e-58 Identities = 169/185 (91%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 153 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 212 Query: 328 caagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcaggg 385 |||| |||||||||||||||||||||||||||||||| | | ||| ||||||||||||| Sbjct: 213 caagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 272 Query: 386 tccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 | |||| ||||| ||||||||||||||||||||||| ||||| ||| ||||||| ||||| Sbjct: 273 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 332 Query: 446 gctgc 450 ||||| Sbjct: 333 gctgc 337
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 200 bits (101), Expect = 3e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 186 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaatggccagctgc 245 ||||||||||| | |||||||| || || || |||||||||||| | |||||||||||| Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977 Query: 246 tgatgctggggctggacaaggtctccggctccgggttccagtccaagcgcgagtacctct 305 ||| ||| |||||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917 Query: 306 tcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28773916 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 28773857 Query: 366 c 366 | Sbjct: 28773856 c 28773856 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 28749713 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 28749772 Query: 328 caagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||||||||||||||| Sbjct: 28749773 caagctcgtccccggcaactccgccggcaccgtcacc 28749809 Score = 127 bits (64), Expect = 3e-26 Identities = 138/160 (86%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 203 tggggtgacgggcgcggcaagatcctcaacaatggccagctgctgatgctggggctggac 262 ||||| ||||| ||||||||||||||| ||| |||||||| |||| |||| ||||||| Sbjct: 28761428 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 28761487 Query: 263 aaggtc-tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacat 321 | |||| ||||||||||| |||||||||||| | ||||||| | |||| ||||||| Sbjct: 28761488 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 28761546 Query: 322 gcagctcaagctcgtccccggcaactccgccggcaccgtc 361 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 28761547 gcagatcaagctcgtccccggcaactccgccggcaccgtc 28761586 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 373 tgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccc 432 |||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 28749954 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 28750013 Query: 433 gcgagccatacacgctgc 450 ||||||| |||||||||| Sbjct: 28750014 gcgagccgtacacgctgc 28750031 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 373 tgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccc 432 ||||||||||||| |||||||| || ||||||||||||||||||||||| || || ||| Sbjct: 28773772 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 28773713 Query: 433 gcgagccatacacgctgc 450 | ||||| |||||||||| Sbjct: 28773712 gggagccgtacacgctgc 28773695 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 372 ctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacg 426 |||||||||||||| || |||||||||||||||||||||||||||||| |||| Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacg 28761743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||||||||||||||||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaac 13230434 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgt 427 |||||||||| | ||||||||||||||||||||||| Sbjct: 28754713 gcacgacgaggtggacttcgagttcctgggcaacgt 28754748 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 395 cgacgagatcgacttcgagttcctgggcaac 425 ||||||| | ||||||||||||||||||||| Sbjct: 4973855 cgacgagctggacttcgagttcctgggcaac 4973825 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 395 cgacgagatcgacttcgagttcctgggcaac 425 ||||||| | ||||||||||||||||||||| Sbjct: 4958743 cgacgagctggacttcgagttcctgggcaac 4958713 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ggcaactccgccggcaccgtcacc 364 |||||||| ||||||||||||||| Sbjct: 13230243 ggcaactcggccggcaccgtcacc 13230266
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 200 bits (101), Expect = 3e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 186 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaatggccagctgc 245 ||||||||||| | |||||||| || || || |||||||||||| | |||||||||||| Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752 Query: 246 tgatgctggggctggacaaggtctccggctccgggttccagtccaagcgcgagtacctct 305 ||| ||| |||||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692 Query: 306 tcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81691 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 81632 Query: 366 c 366 | Sbjct: 81631 c 81631 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 57488 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 57547 Query: 328 caagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||||||||||||||| Sbjct: 57548 caagctcgtccccggcaactccgccggcaccgtcacc 57584 Score = 127 bits (64), Expect = 3e-26 Identities = 138/160 (86%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 203 tggggtgacgggcgcggcaagatcctcaacaatggccagctgctgatgctggggctggac 262 ||||| ||||| ||||||||||||||| ||| |||||||| |||| |||| ||||||| Sbjct: 69203 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 69262 Query: 263 aaggtc-tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacat 321 | |||| ||||||||||| |||||||||||| | ||||||| | |||| ||||||| Sbjct: 69263 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 69321 Query: 322 gcagctcaagctcgtccccggcaactccgccggcaccgtc 361 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 69322 gcagatcaagctcgtccccggcaactccgccggcaccgtc 69361 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 373 tgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccc 432 |||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 57729 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 57788 Query: 433 gcgagccatacacgctgc 450 ||||||| |||||||||| Sbjct: 57789 gcgagccgtacacgctgc 57806 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 373 tgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccc 432 ||||||||||||| |||||||| || ||||||||||||||||||||||| || || ||| Sbjct: 81547 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 81488 Query: 433 gcgagccatacacgctgc 450 | ||||| |||||||||| Sbjct: 81487 gggagccgtacacgctgc 81470 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 372 ctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacg 426 |||||||||||||| || |||||||||||||||||||||||||||||| |||| Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacg 69518 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgt 427 |||||||||| | ||||||||||||||||||||||| Sbjct: 62488 gcacgacgaggtggacttcgagttcctgggcaacgt 62523
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 184 bits (93), Expect = 2e-43 Identities = 162/184 (88%), Gaps = 2/184 (1%) Strand = Plus / Plus Query: 269 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 328 ||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||| Sbjct: 309 tccggctccgggttccagtcccggcacgagtacctgttcggcaagatcgacatgcagctg 368 Query: 329 aagctcgtccccggcaactccgccggcaccgtcaccgc--attacctgtcgtcgcagggt 386 ||| || || |||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 369 cggctggtgccgggcaactccgccggcaccgtcaccgcctactacctgtcgtcgcagggc 428 Query: 387 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacg 446 ||||||||||||||||||||||||||||||||||||| || ||||||| |||||| Sbjct: 429 ggcgcgcacgacgagatcgacttcgagttcctgggcaacgtgtccggcgagccctacacg 488 Query: 447 ctgc 450 |||| Sbjct: 489 ctgc 492
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 174 bits (88), Expect = 2e-40 Identities = 195/227 (85%), Gaps = 4/227 (1%) Strand = Plus / Plus Query: 203 tggggtgacgggcgcggcaagatcctcaacaatggccagctgctgatgctggggctggac 262 ||||| ||||| ||||||||||||||| ||| |||||||| |||| |||| ||||||| Sbjct: 194 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 253 Query: 263 aaggtc-tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacat 321 | |||| ||||||||||| |||||||||||| | ||||||| | |||| ||||||| Sbjct: 254 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 312 Query: 322 gcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtc 379 |||| ||||||||||||||||||||||||||||||||||| || | | ||||||||||| Sbjct: 313 gcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtcgtc 372 Query: 380 gcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacg 426 |||||| || |||||||||||||||||||||||||||||| |||| Sbjct: 373 gcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacg 419
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 150279 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 150338 Query: 328 caagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||||||||||||||| Sbjct: 150339 caagctcgtccccggcaactccgccggcaccgtcacc 150375 Score = 127 bits (64), Expect = 3e-26 Identities = 138/160 (86%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 203 tggggtgacgggcgcggcaagatcctcaacaatggccagctgctgatgctggggctggac 262 ||||| ||||| ||||||||||||||| ||| |||||||| |||| |||| ||||||| Sbjct: 161994 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 162053 Query: 263 aaggtc-tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacat 321 | |||| ||||||||||| |||||||||||| | ||||||| | |||| ||||||| Sbjct: 162054 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 162112 Query: 322 gcagctcaagctcgtccccggcaactccgccggcaccgtc 361 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 162113 gcagatcaagctcgtccccggcaactccgccggcaccgtc 162152 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 373 tgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccc 432 |||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 150520 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 150579 Query: 433 gcgagccatacacgctgc 450 ||||||| |||||||||| Sbjct: 150580 gcgagccgtacacgctgc 150597 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 372 ctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacg 426 |||||||||||||| || |||||||||||||||||||||||||||||| |||| Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacg 162309 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgt 427 |||||||||| | ||||||||||||||||||||||| Sbjct: 155279 gcacgacgaggtggacttcgagttcctgggcaacgt 155314
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 161 bits (81), Expect = 2e-36 Identities = 160/184 (86%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 269 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 328 |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || Sbjct: 292 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 351 Query: 329 aagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcagggt 386 ||||| || || |||||||||| ||||| |||||| | | ||||||||||| ||||| Sbjct: 352 aagctggtgccaggcaactccg-tggcacggtcaccaccttctacctgtcgtcccagggc 410 Query: 387 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacg 446 ||||||||||||||||||||||||||||||||||||| | | | ||||| |||||| Sbjct: 411 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 470 Query: 447 ctgc 450 |||| Sbjct: 471 ctgc 474
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 155 bits (78), Expect = 1e-34 Identities = 192/229 (83%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 200 acctggggtgacgggcgcggcaagatcctcaacaatggccagctgctgatgctggggctg 259 |||||||| ||||| ||||||||||||||| |||| |||||||| |||| |||| || Sbjct: 204 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 263 Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 264 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 323 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcg 377 |||||||||||||||||||| || ||||||||||||||||| || | | || || ||| Sbjct: 324 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 383 Query: 378 tcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacg 426 ||||||||| || |||||||||||||||||||||||||||||| |||| Sbjct: 384 tcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacg 432
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 155 bits (78), Expect = 1e-34 Identities = 192/229 (83%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 200 acctggggtgacgggcgcggcaagatcctcaacaatggccagctgctgatgctggggctg 259 |||||||| ||||| ||||||||||||||| |||| |||||||| |||| |||| || Sbjct: 211 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 270 Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 271 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 330 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcg 377 |||||||||||||||||||| || ||||||||||||||||| || | | || || ||| Sbjct: 331 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 390 Query: 378 tcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacg 426 ||||||||| || |||||||||||||||||||||||||||||| |||| Sbjct: 391 tcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacg 439
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 131 bits (66), Expect = 2e-27 Identities = 132/153 (86%), Gaps = 2/153 (1%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 |||||||||||| |||||||||||| ||||||||||| ||||||| |||| |||||| | Sbjct: 322 ctccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagat 381 Query: 328 caagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcaggg 385 |||||| || ||||| ||||| ||||||||||||||| | | ||||| ||||| ||||| Sbjct: 382 caagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtcccaggg 441 Query: 386 tccgacgcacgacgagatcgacttcgagttcct 418 || | |||||||||||||||||||||||||| Sbjct: 442 ccccaaccacgacgagatcgacttcgagttcct 474
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 129 bits (65), Expect = 8e-27 Identities = 164/196 (83%), Gaps = 2/196 (1%) Strand = Plus / Minus Query: 257 ctggacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatc 316 ||||||| || |||||| |||||||||||||||||| ||||||||| |||||||||||| Sbjct: 936 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 877 Query: 317 gacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctg 374 || |||||| | ||||| || || |||||||| || |||||||| || | | |||||| Sbjct: 876 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 817 Query: 375 tcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgc 434 ||||||||||| ||||||||||||||||| | ||||||||||||||||| | || Sbjct: 816 tcgtcgcagggcgacgcgcacgacgagatcgacctggagttcctgggcaacgtgtcgggc 757 Query: 435 gagccatacacgctgc 450 ||||| |||||||||| Sbjct: 756 gagccctacacgctgc 741
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 129 bits (65), Expect = 8e-27 Identities = 164/196 (83%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 257 ctggacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatc 316 ||||||| || |||||| |||||||||||||||||| ||||||||| |||||||||||| Sbjct: 268 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 327 Query: 317 gacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctg 374 || |||||| | ||||| || || |||||||| || |||||||| || | | |||||| Sbjct: 328 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 387 Query: 375 tcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacccgc 434 ||||||||||| ||||||||||||||||| | ||||||||||||||||| | || Sbjct: 388 tcgtcgcagggcgacgcgcacgacgagatcgacctggagttcctgggcaacgtgtcgggc 447 Query: 435 gagccatacacgctgc 450 ||||| |||||||||| Sbjct: 448 gagccctacacgctgc 463
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 115 bits (58), Expect = 1e-22 Identities = 223/277 (80%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 176 agcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaat 235 |||||| |||| || |||||| | ||||||||||| || || || |||||||| ||||| Sbjct: 316 agcttcaacaacgatttcgacatcacctggggtgatggccgggggaagatcctaaacaac 375 Query: 236 ggccagctgctgatgctggggctggacaaggtctccggctccgggttccagtccaagcgc 295 |||||||| || | || |||||||| ||||||||| ||||| || || || | Sbjct: 376 ggccagctcctcagcctctccctggacaaaacctccggctcagggtttcaatctaaaaac 435 Query: 296 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggc 355 |||||||||| ||||| ||||||||||| || |||||||||||||||||||| || || Sbjct: 436 cagtacctctttggcaacatcgacatgcaactgaagctcgtccccggcaactcggctgga 495 Query: 356 accgtcaccgc--attacctgtcgtcgcagggtccgacgcacgacgagatcgacttcgag 413 || |||||||| ||||||| || || ||||| || || ||||||||||||||||| ||| Sbjct: 496 acggtcaccgcctattacctatcctcacagggccctacccacgacgagatcgactttgag 555 Query: 414 ttcctgggcaacgtcacccgcgagccatacacgctgc 450 ||||| || |||||| || || |||| ||||| |||| Sbjct: 556 ttcctcgggaacgtctccggccagccctacaccctgc 592
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 115 bits (58), Expect = 1e-22 Identities = 136/162 (83%) Strand = Plus / Plus Query: 200 acctggggtgacgggcgcggcaagatcctcaacaatggccagctgctgatgctggggctg 259 |||||||| ||||| ||||||||||||||| |||| |||||||| |||| |||| || Sbjct: 94 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 153 Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 154 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 213 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtc 361 |||||||||||||||||||| || ||||||||||||||||| Sbjct: 214 atgcagctcaagctcgtcccgggggactccgccggcaccgtc 255 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 375 tcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacg 426 |||||||||||| || |||||||||||||||||||||||||||||| |||| Sbjct: 396 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacg 447
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 105 bits (53), Expect = 1e-19 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc--attac 371 |||||||||||| ||||| ||||||| || |||||||||||||||||||| || | ||| Sbjct: 311 atcgacatgcagatcaaggtcgtccctggtaactccgccggcaccgtcacagcctactac 370 Query: 372 ctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaacgt 427 || || || ||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 371 ctctcctcccagggaacgacgcacgacgagatcgactttgagttccttggcaacgt 426
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 99.6 bits (50), Expect = 8e-18 Identities = 86/97 (88%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcagg 384 ||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 275 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 334 Query: 385 gtccgacgcacgacgagatcgacttcgagttcctggg 421 || |||||||||||||||||||||||||||||| Sbjct: 335 actcggagcacgacgagatcgacttcgagttcctggg 371
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 99.6 bits (50), Expect = 8e-18 Identities = 86/97 (88%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcagg 384 ||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 272 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 331 Query: 385 gtccgacgcacgacgagatcgacttcgagttcctggg 421 || |||||||||||||||||||||||||||||| Sbjct: 332 actcggagcacgacgagatcgacttcgagttcctggg 368
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatg 322 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 251 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgct 448 ||||||||||||||| | |||||||| |||||||||||| |||||||||||||||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgct 380
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgct 448 ||||||||||||||| | |||||||| |||||||||||| |||||||||||||||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgct 29214 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 391 cgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||||||||||||||||||||| ||||| Sbjct: 32715 cgcacgacgagatcgacttcgagttcctggggaacgt 32679 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||||||||||||||||||| | ||| |||||||||| || || |||| || | Sbjct: 32995 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 32936 Query: 328 caagctcgtccccggc 343 ||||||||||||||| Sbjct: 32935 gaagctcgtccccggc 32920
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgct 448 ||||||||||||||| | |||||||| |||||||||||| |||||||||||||||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgct 30553506 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagcc 439 |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 32180420 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 32180467 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 391 cgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||||||||||||||||||||| ||||| Sbjct: 30557007 cgcacgacgagatcgacttcgagttcctggggaacgt 30556971 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||||||||||||||||||| | ||| |||||||||| || || |||| || | Sbjct: 30557287 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 30557228 Query: 328 caagctcgtccccggc 343 ||||||||||||||| Sbjct: 30557227 gaagctcgtccccggc 30557212 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacc 431 ||||||||||||||| | ||||||||||||||||||||| Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaacgtcacc 30508382 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 |||||||||| | ||||||||||| ||| | |||||||||||||||||||| Sbjct: 30508619 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 315 tcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| ||||| ||||||||||| || ||||||||||||||| |||||| Sbjct: 30517206 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 30517157 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 411 gagttcctgggcaacgtcacccgcgagccatacacgctgc 450 |||||||| |||||||||||| | |||| |||||||||| Sbjct: 30517006 gagttcctcggcaacgtcaccgggcagccgtacacgctgc 30516967
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/99 (85%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcaccgcatt--acctgtcgtcgcagggt 386 ||||||||||| ||||||||||| || ||||| ||| |||| || |||| || || || Sbjct: 8 aagctcgtcccgggcaactccgctggtaccgttaccacattctacttgtcttcccaaggg 67 Query: 387 ccgacgcacgacgagatcgacttcgagttcctgggcaac 425 |||| ||||||||||||||||||||||||||||||||| Sbjct: 68 ccgaatcacgacgagatcgacttcgagttcctgggcaac 106
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcagg 384 ||||||||||| |||| ||||||||||||| |||||||| | ||||||||||||||| Sbjct: 324 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 383 Query: 385 gtccgacgcacgacgagatcgacttcgagttcctggg 421 || ||||||||||||||||||||||||| |||| Sbjct: 384 actcggagcacgacgagatcgacttcgagttcttggg 420
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgcat--tacctgtcgtcgcagg 384 ||||||||||| |||| |||||||||||||||||||||| | ||||||||||| ||| Sbjct: 285 tcaagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctgtcgtcacaga 344 Query: 385 gtccgacgcacgacgagatcgacttcgagttcctggg 421 || ||||||||||||||||||||||||| |||| Sbjct: 345 actcggagcacgacgagatcgacttcgagttcttggg 381
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagcc 439 |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 76109 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 76156
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/79 (87%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 345 actccgccggcaccgtcaccgcat--tacctgtcgtcgcagggtccgacgcacgacgaga 402 |||||||||||||||| ||||| | ||| |||| ||||| || ||||| |||||||||| Sbjct: 1 actccgccggcaccgtgaccgcttactacttgtcttcgcaagggccgactcacgacgaga 60 Query: 403 tcgacttcgagttcctggg 421 | ||||||||||||||||| Sbjct: 61 ttgacttcgagttcctggg 79
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagcc 439 |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 331 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 378
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagcc 439 |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 335 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 382
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/99 (84%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcaccgcatt--acctgtcgtcgcagggt 386 ||||||||| |||| ||||||| ||||||||||| || || |||||||||||||| Sbjct: 297 aagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgcagaac 356 Query: 387 ccgacgcacgacgagatcgacttcgagttcctgggcaac 425 || ||||||||||||||||| |||||||||||||||| Sbjct: 357 tcggagcacgacgagatcgactccgagttcctgggcaac 395
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagcc 439 |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 31596 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 31643
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 ||||||||||||||||| || || || |||||| |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||| |||||||||| ||| | || ||||| || |||||||||||||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgc 327
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 251 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcac 309
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 214 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcac 272
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 ||||||||||||||||| || || || |||||| |||||| | || || ||||||||| Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||| |||||||||| ||| | || ||||| || |||||||||||||| Sbjct: 19039 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgc 19085 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| || |||||||||||| |||| ||||| |||| |||||||| || || |||||| Sbjct: 17357 ttcggtaaaatcgacatgcagatcaaactcgttgccggaaactccgctggaactgtcacc 17416 Query: 365 gc 366 || Sbjct: 17417 gc 17418
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 ||||||||||||||||| || || || |||||| |||||| | || || ||||||||| Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||| |||||||||| ||| | || ||||| || |||||||||||||| Sbjct: 27960 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgc 28006 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| || |||||||||||| |||| ||||| |||| |||||||| || || |||||| Sbjct: 26278 ttcggtaaaatcgacatgcagatcaaactcgttgccggaaactccgctggaactgtcacc 26337 Query: 365 gc 366 || Sbjct: 26338 gc 26339
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 251 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcac 309
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 ||||||||||||||||| || || || |||||| |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||| |||||||||| ||| | || ||||| || |||||||||||||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgc 327
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 ||||||||||||||||| || || || |||||| |||||| | || || ||||||||| Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||| |||||||||| ||| | || ||||| || |||||||||||||| Sbjct: 270 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgc 316
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacg 426 ||||||||||||||||||||||||||||||||||| Sbjct: 10359113 gcacgacgagatcgacttcgagttcctgggcaacg 10359147 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 330 agctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||||||||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcacc 10358939 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgct 448 ||||||||||||| | | |||||||| |||||||||||| || ||||||||||||| Sbjct: 15085618 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgct 15085673 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggca 423 ||||||||||||| | ||||||||||||||||||| Sbjct: 28642113 gacgcacgacgagctggacttcgagttcctgggca 28642147 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||| | ||||||||||||||||||||| Sbjct: 1445478 gcacgacgagctggacttcgagttcctgggcaac 1445511 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacg 426 ||||||||||||||||| |||||| | ||||||| Sbjct: 10363968 cacgacgagatcgactttgagttcttaggcaacg 10364001 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 gtccccggcaactccgccggcaccgtcacc 364 ||||||||||| || ||||||||||||||| Sbjct: 10363481 gtccccggcaattcggccggcaccgtcacc 10363510
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 228 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcac 286
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 260 gacaaggtctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgac 319 ||||||||||||||||| || || || |||||| |||||| | || || ||||||||| Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228 Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||| |||||||||| ||| | || ||||| || |||||||||||||| Sbjct: 229 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgc 275
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacg 426 ||||||||||||||||||||||||||||||||||| Sbjct: 1535 gcacgacgagatcgacttcgagttcctgggcaacg 1569 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 330 agctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||||||||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcacc 1361 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacg 426 ||||||||||||||||| |||||| | ||||||| Sbjct: 6390 cacgacgagatcgactttgagttcttaggcaacg 6423 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 gtccccggcaactccgccggcaccgtcacc 364 ||||||||||| || ||||||||||||||| Sbjct: 5903 gtccccggcaattcggccggcaccgtcacc 5932
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacg 426 ||||||||||||||||||||||||||||||||||| Sbjct: 124923 gcacgacgagatcgacttcgagttcctgggcaacg 124957 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 330 agctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||||||||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcacc 124749
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 37112 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcac 37054
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1331 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcac 1389
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 193 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcac 251
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 391 cgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||||||||||||||||||||| ||||| Sbjct: 335 cgcacgacgagatcgacttcgagttcctggggaacgt 371 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||||||||||||||||||| | ||| |||||||||| || || |||| || | Sbjct: 210 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 269 Query: 328 caagctcgtccccggc 343 ||||||||||||||| Sbjct: 270 gaagctcgtccccggc 285
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||||||||||||||||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaac 147622 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ggcaactccgccggcaccgtcacc 364 |||||||| ||||||||||||||| Sbjct: 147431 ggcaactcggccggcaccgtcacc 147454
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||||||||||||||||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaac 675 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ggcaactccgccggcaccgtcacc 364 |||||||| ||||||||||||||| Sbjct: 589 ggcaactcggccggcaccgtcacc 612
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 391 cgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||||||||||||||||||||| ||||| Sbjct: 403 cgcacgacgagatcgacttcgagttcctggggaacgt 439 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 268 ctccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagct 327 ||||||||||||||||||||||||| | ||| |||||||||| || || |||| || | Sbjct: 278 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 337 Query: 328 caagctcgtccccggc 343 ||||||||||||||| Sbjct: 338 gaagctcgtccccggc 353
>ref|XM_465430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 862 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgct 448 ||||||||||||| | | |||||||| |||||||||||| || ||||||||||||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgct 461
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||||||||||| ||||| |||||||||||||||||||||| Sbjct: 113311 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 113350 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctggg 421 |||||||||||||||||||||||||||||| Sbjct: 113473 gcacgacgagatcgacttcgagttcctggg 113502
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||||||||||| ||||| |||||||||||||||||||||| Sbjct: 12930 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 12969 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctggg 421 |||||||||||||||||||||||||||||| Sbjct: 13092 gcacgacgagatcgacttcgagttcctggg 13121
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 63.9 bits (32), Expect = 4e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 269 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 328 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 212 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 271 Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacc 307 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 341 cacgacgagatcgacatcgagttcatgggcaac 373
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||||||||||| ||||| |||||||||||||||||||||| Sbjct: 19010113 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 19010152 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctggg 421 |||||||||||||||||||||||||||||| Sbjct: 19010275 gcacgacgagatcgacttcgagttcctggg 19010304
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgct 448 ||||||||||||| | | |||||||| |||||||||||| || ||||||||||||| Sbjct: 91399 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgct 91454
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 63.9 bits (32), Expect = 4e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 269 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 328 ||||||||||| ||| |||||||| | |||||||||||||| || |||| | || | Sbjct: 221 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatg 280 Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| |||||||||||||||||| |||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacc 316 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 388 cgacgcacgacgagatcgacttcgagttcctgggcaac 425 |||| ||||||||||||||| |||||||| |||||||| Sbjct: 345 cgacccacgacgagatcgacatcgagttcatgggcaac 382
>dbj|AK063216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D12, full insert sequence Length = 862 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacacgct 448 ||||||||||||| | | |||||||| |||||||||||| || ||||||||||||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgct 461
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagcc 439 |||| ||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct: 390 gcacaacgagttcgacttcgagttcctgggcaacgtgaccggcgagcc 437
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgc 366 ||||||||||| ||||| |||||||||||||||||||||| Sbjct: 19168762 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 19168801 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctggg 421 |||||||||||||||||||||||||||||| Sbjct: 19168924 gcacgacgagatcgacttcgagttcctggg 19168953
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacc 431 ||||||||||||||| | ||||||||||||||||||||| Sbjct: 316 cacgacgagatcgacctggagttcctgggcaacgtcacc 354 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 |||||||||| | ||||||||||| ||| | |||||||||||||||||||| Sbjct: 228 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 279
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacc 431 ||||||||||||||| | ||||||||||||||||||||| Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaacgtcacc 141759 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 |||||||||| | ||||||||||| ||| | |||||||||||||||||||| Sbjct: 141996 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 315 tcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| ||||| ||||||||||| || ||||||||||||||| |||||| Sbjct: 150583 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 150534 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 411 gagttcctgggcaacgtcacccgcgagccatacacgctgc 450 |||||||| |||||||||||| | |||| |||||||||| Sbjct: 150383 gagttcctcggcaacgtcaccgggcagccgtacacgctgc 150344
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacc 431 ||||||||||||||| | ||||||||||||||||||||| Sbjct: 379 cacgacgagatcgacctggagttcctgggcaacgtcacc 417 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 |||||||||| | ||||||||||| ||| | |||||||||||||||||||| Sbjct: 291 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 342
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||||||||||||||| |||||| Sbjct: 445 gcacgacgagatcgacttcgagttccttggcaac 478
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtc 361 |||||| |||||||||||||||||||||||||| Sbjct: 328 aagctcatccccggcaactccgccggcaccgtc 360 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacg 426 |||||||||||||||| | |||||| ||||||||| Sbjct: 396 gcacgacgagatcgacatggagttcatgggcaacg 430
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtc 361 |||||| |||||||||||||||||||||||||| Sbjct: 353 aagctcatccccggcaactccgccggcaccgtc 385 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacg 426 |||||||||||||||| | |||||| ||||||||| Sbjct: 421 gcacgacgagatcgacatggagttcatgggcaacg 455
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 373 tgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||| || ||| ||||||||||||||| ||||||||||| |||||| Sbjct: 41 tgtcgtcgcaagggtcgatgcacgacgagatcgatttcgagttcctcggcaac 93
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacc 319 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 353 cacgacgagatcgacatcgagttcatgggcaac 385
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacc 324 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 358 cacgacgagatcgacatcgagttcatgggcaac 390
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 289 aagctcgtcgacggcaactccgccggcaccgtcacc 324
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacc 8321992 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 8322026 cacgacgagatcgacatcgagttcatgggcaac 8322058 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 caactccgccggcaccgtcacc 364 |||||||||||||||||||||| Sbjct: 8379172 caactccgccggcaccgtcacc 8379151
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacc 315 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 349 cacgacgagatcgacatcgagttcatgggcaac 381
>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete cds Length = 1221 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 272 ggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctcaag 331 ||||| || ||||| |||||| ||| ||||| || ||||| || |||||||| ||||| Sbjct: 266 ggctcgggtttccaatccaagaacgaatacctttttggcaaaattgacatgcaactcaaa 325 Query: 332 ctcgtccccggcaactccgccggcaccgtcac 363 || ||||| |||||||| || ||||||||||| Sbjct: 326 ctagtccctggcaactctgctggcaccgtcac 357
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacc 62101 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 62135 cacgacgagatcgacatcgagttcatgggcaac 62167 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 caactccgccggcaccgtcacc 364 |||||||||||||||||||||| Sbjct: 119281 caactccgccggcaccgtcacc 119260
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacc 324 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 358 cacgacgagatcgacatcgagttcatgggcaac 390
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 |||||||||| | ||||||||||| ||| | |||||||||||||||||||| Sbjct: 323 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 272 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 411 gagttcctgggcaacgtcacc 431 ||||||||||||||||||||| Sbjct: 231 gagttcctgggcaacgtcacc 211
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 aagctcgtccccggcaactccgccggcaccgtcacc 364 ||||||||| ||||||||||||||||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacc 319 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||||| |||||||| |||||||| Sbjct: 353 cacgacgagatcgacatcgagttcatgggcaac 385
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 266
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 351
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggca 423 ||||||||||||| | ||||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctgggca 510
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggca 423 ||||||||||||| | ||||||||||||||||||| Sbjct: 478 gacgcacgacgagctggacttcgagttcctgggca 512
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 7311670 gacgcacgacgagctggacttcgagttcctggggaacgt 7311632 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||| | |||||||||||| |||||||| Sbjct: 35691476 gacgcacgacgagctggacttcgagttcttgggcaac 35691440 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcct 418 ||||||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagttcct 944240
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 95873 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 95823
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 351
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 35421 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 35371
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 62926 gacgcacgacgagctggacttcgagttcctggggaacgt 62888
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/110 (81%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 311 aagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgc--at 368 |||||||| |||||||||||||| ||||| || || || ||||||||||| || || || Sbjct: 255 aagatcgatatgcagctcaagctggtccctggaaattctgccggcaccgttactgcttat 314 Query: 369 tacctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagttcct 418 || || || || || || || || || || |||||||||||||||||||| Sbjct: 315 tatctttcatcacaagggcctacccatgatgagatcgacttcgagttcct 364
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 7309565 gacgcacgacgagctggacttcgagttcctggggaacgt 7309527 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||| | |||||||||||| |||||||| Sbjct: 35781549 gacgcacgacgagctggacttcgagttcttgggcaac 35781513 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcct 418 ||||||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagttcct 944238
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 279 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 329
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 351
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggca 423 ||||||||||||| | ||||||||||||||||||| Sbjct: 106126 gacgcacgacgagctggacttcgagttcctgggca 106160
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggca 423 ||||||||||||| | ||||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctgggca 510
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggca 423 ||||||||||||| | ||||||||||||||||||| Sbjct: 477 gacgcacgacgagctggacttcgagttcctgggca 511
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 433 gacgcacgacgagctggacttcgagttcctggggaacgt 471
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 313 gatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcac 266
>ref|NM_113277.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT3G23730 mRNA, complete cds Length = 1074 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||||||||||| || |||||| |||| |||||||| || |||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcac 375
>ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||| | ||||||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctgggcaac 669
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 315 tcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| ||||| ||||||||||| || ||||||||||||||| |||||| Sbjct: 206 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 255 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 411 gagttcctgggcaacgtcacccgcgagccatacacgctgc 450 |||||||| |||||||||||| | |||| |||||||||| Sbjct: 310 gagttcctcggcaacgtcaccgggcagccgtacacgctgc 349
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 315 tcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| ||||| ||||||||||| || ||||||||||||||| |||||| Sbjct: 278 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 327 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 411 gagttcctgggcaacgtcacccgcgagccatacacgctgc 450 |||||||| |||||||||||| | |||| |||||||||| Sbjct: 382 gagttcctcggcaacgtcaccgggcagccgtacacgctgc 421
>gb|AY084449.1| Arabidopsis thaliana clone 10852 mRNA, complete sequence Length = 1076 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||||||||||| || |||||| |||| |||||||| || |||||||| Sbjct: 327 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcac 376
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||| | ||||||||||||||||||||| Sbjct: 126750 gcacgacgagctggacttcgagttcctgggcaac 126783
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||||||||| |||||||| |||||||| Sbjct: 353 gcacgacgagatcgacatcgagttcatgggcaac 386 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 340 cggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||| Sbjct: 296 cggcaactccgccggcaccgtcacc 320
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||||||||| |||||||| |||||||| Sbjct: 353 gcacgacgagatcgacatcgagttcatgggcaac 386 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 340 cggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||| Sbjct: 296 cggcaactccgccggcaccgtcacc 320
>dbj|AK175805.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A12 Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||||||||||| || |||||| |||| |||||||| || |||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcac 375
>dbj|AK175804.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A11 Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||||||||||| || |||||| |||| |||||||| || |||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcac 375
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 |||||||||||||| || |||||| |||| |||||||| || |||||||| Sbjct: 24457 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcac 24506
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||| | ||||||||||||||||||||| Sbjct: 8899 gcacgacgagctggacttcgagttcctgggcaac 8932
>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full insert sequence Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||| | ||||||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctgggcaac 669
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 315 tcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| ||||| ||||||||||| || ||||||||||||||| |||||| Sbjct: 296 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 345 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 411 gagttcctgggcaacgtcacccgcgagccatacacgctgc 450 |||||||| |||||||||||| | |||| |||||||||| Sbjct: 400 gagttcctcggcaacgtcaccgggcagccgtacacgctgc 439
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||| | |||||||||||| |||||||| Sbjct: 456 gacgcacgacgagctggacttcgagttcttgggcaac 492
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 ||||||||||||||| | ||||||||||||| | || || ||||||| ||||| Sbjct: 361 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacac 413
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||| | |||||||||||| |||||||| Sbjct: 89254 gacgcacgacgagctggacttcgagttcttgggcaac 89218
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 340 cggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||| Sbjct: 307 cggcaactccgccggcaccgtcacc 331 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcctgggcaac 425 |||||||||||| |||||||| |||||||| Sbjct: 368 gacgagatcgacatcgagttcatgggcaac 397
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcctgggcaa 424 |||||||||||| |||||||||||||||| Sbjct: 295 gacgagatcgacctcgagttcctgggcaa 323
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 ||||||||||||||| | ||||||||||||| | || || ||||||| ||||| Sbjct: 17438276 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacac 17438328 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgtcacccgcgagccatacac 445 ||||||||||||||| | ||||||||||||| | || || ||||||| ||||| Sbjct: 106500 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacac 106552
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 340 cggcaactccgccggcaccgtcacc 364 ||||||||||||||||||||||||| Sbjct: 295 cggcaactccgccggcaccgtcacc 319 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcctgggcaac 425 |||||||||||| |||||||| |||||||| Sbjct: 356 gacgagatcgacatcgagttcatgggcaac 385
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||| | |||||||||||| |||||||| Sbjct: 407 gacgcacgacgagctggacttcgagttcttgggcaac 443
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 389 gacgcacgacgagatcgacttcgagttcctgggcaac 425 ||||||||||||| | |||||||||||| |||||||| Sbjct: 460 gacgcacgacgagctggacttcgagttcttgggcaac 496
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 320 atgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||||||||||||||| |||||||||| || ||||| ||||| Sbjct: 261 atgcagctcaagctcgttgccggcaactctgctggcactgtcac 304
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcct 418 ||||||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagttcct 99437
>ref|XM_450915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1457 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||| | |||||||||||||| |||||||| Sbjct: 404 cacgacgaggtggacttcgagttcctcggcaacgt 438
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 395 cgacgagatcgacttcgagttcctgggcaac 425 ||||||| | ||||||||||||||||||||| Sbjct: 156 cgacgagctggacttcgagttcctgggcaac 186
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcctgggcaacg 426 ||||| |||||||||||||||||||| |||| Sbjct: 424 gacgaaatcgacttcgagttcctggggaacg 454
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/38 (92%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 401 gatcgacttcgagtt--cctgggcaacgtcacccgcga 436 ||||||||||||||| |||||||||||||||| |||| Sbjct: 19933644 gatcgacttcgagttttcctgggcaacgtcaccggcga 19933681
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||| | |||||||||||||| |||||||| Sbjct: 13727110 cacgacgaggtggacttcgagttcctcggcaacgt 13727076
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 395 cgacgagatcgacttcgagttcctgggcaac 425 ||||||| | ||||||||||||||||||||| Sbjct: 15969 cgacgagctggacttcgagttcctgggcaac 15939 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 395 cgacgagatcgacttcgagttcctgggcaac 425 ||||||| | ||||||||||||||||||||| Sbjct: 857 cgacgagctggacttcgagttcctgggcaac 827
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 395 cgacgagatcgacttcgagttcctgggcaac 425 ||||||| | ||||||||||||||||||||| Sbjct: 161338 cgacgagctggacttcgagttcctgggcaac 161308 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 395 cgacgagatcgacttcgagttcctgggcaac 425 ||||||| | ||||||||||||||||||||| Sbjct: 146226 cgacgagctggacttcgagttcctgggcaac 146196
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||| | |||||||||||||| |||||||| Sbjct: 125224 cacgacgaggtggacttcgagttcctcggcaacgt 125190
>dbj|AK122079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N05, full insert sequence Length = 1621 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||| | |||||||||||||| |||||||| Sbjct: 596 cacgacgaggtggacttcgagttcctcggcaacgt 630
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcct 418 ||||||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagttcct 377
>dbj|AK060495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E08, full insert sequence Length = 1457 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaacgt 427 ||||||||| | |||||||||||||| |||||||| Sbjct: 404 cacgacgaggtggacttcgagttcctcggcaacgt 438
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaacg 426 |||||||||||||||| | |||||| ||||||||| Sbjct: 435 gcacgacgagatcgacatggagttcatgggcaacg 469
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/38 (92%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 401 gatcgacttcgagtt--cctgggcaacgtcacccgcga 436 ||||||||||||||| |||||||||||||||| |||| Sbjct: 19859858 gatcgacttcgagttttcctgggcaacgtcaccggcga 19859895
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/38 (92%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 401 gatcgacttcgagtt--cctgggcaacgtcacccgcga 436 ||||||||||||||| |||||||||||||||| |||| Sbjct: 93616 gatcgacttcgagttttcctgggcaacgtcaccggcga 93579
>ref|NM_118713.2| Arabidopsis thaliana XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25810 (XTR6) mRNA, complete cds Length = 1078 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| || |||||||||||| |||| ||||| |||| |||||||| || || |||||| Sbjct: 250 ttcggtaaaatcgacatgcagatcaaactcgttgccggaaactccgctggaactgtcacc 309 Query: 365 gc 366 || Sbjct: 310 gc 311
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 caactccgccggcaccgtcacc 364 |||||||||||||||||||||| Sbjct: 285 caactccgccggcaccgtcacc 306
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctgggcaac 425 |||||||||||||||| | |||||| |||||||| Sbjct: 252 gcacgacgagatcgacatggagttcatgggcaac 285
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 caactccgccggcaccgtcacc 364 |||||||||||||||||||||| Sbjct: 169 caactccgccggcaccgtcacc 148
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 gctgctgatgctggggctggac 262 |||||||||||||||||||||| Sbjct: 2138594 gctgctgatgctggggctggac 2138573
>emb|AJ555155.1|CSA555155 Cucumis sativus XTH3 gene for putative xyloglucan endotransglycosylase, exons 1-3, clone 4 Length = 3074 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| ||||| |||||||||| || ||||| ||||||||||| ||||| Sbjct: 1859 atcgatatgcaaatcaagctcgttcctggcaattccgccggcactgtcac 1908
>emb|AJ555126.1|CSA555126 Cucumis sativus mRNA for putative xyloglucan endotransglycosylase (xth3 gene) Length = 1038 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcac 363 ||||| ||||| |||||||||| || ||||| ||||||||||| ||||| Sbjct: 241 atcgatatgcaaatcaagctcgttcctggcaattccgccggcactgtcac 290
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 tgctgatgctggggctggacaa 264 |||||||||||||||||||||| Sbjct: 8958151 tgctgatgctggggctggacaa 8958130
>gb|U43488.1|ATU43488 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR6) mRNA, complete cds Length = 885 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 305 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcacc 364 ||||| || |||||||||||| |||| ||||| |||| |||||||| || || |||||| Sbjct: 202 ttcggtaaaatcgacatgcagatcaaactcgttgccggaaactccgctggaactgtcacc 261 Query: 365 gc 366 || Sbjct: 262 gc 263
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 392 gcacgacgagatcgacttcgagttcctggg 421 |||||| |||||||||||||||||| |||| Sbjct: 353 gcacgatgagatcgacttcgagttcttggg 382
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 cggcaagatcgacatgcagctcaag 331 ||||||||||||||||||| ||||| Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctggg 421 |||||||||||||| ||||||||| |||| Sbjct: 370 cacgacgagatcgatttcgagttcttggg 398
>gb|AF223419.1|AF223419 Asparagus officinalis xyloglucan endotransglycosylase XET1 (AoXET1) mRNA, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctgggcaac 425 ||||| |||||||||||||| ||||| |||||| Sbjct: 314 cacgatgagatcgacttcgaattcctcggcaac 346
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ggtgctggtgatcctgctcgc 153 ||||||||||||||||||||| Sbjct: 4161945 ggtgctggtgatcctgctcgc 4161925
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 393 cacgacgagatcgacttcgagttcctggg 421 |||||||||||||| ||||||||| |||| Sbjct: 436 cacgacgagatcgatttcgagttcttggg 464
>ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1304 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1291 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 578416 gcgcggcaagatcctcaaca 578435
>ref|XM_597941.2| PREDICTED: Bos taurus similar to C-C chemokine receptor type 6 (C-C CKR-6) (CC-CKR-6) (CCR-6) (LARC receptor) (GPR-CY4) (GPRCY4) (Chemokine receptor-like 3) (CKR-L3) (DRY6) (LOC519716), mRNA Length = 1113 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agctgctgatgctggggctg 259 |||||||||||||||||||| Sbjct: 617 agctgctgatgctggggctg 636
>ref|XM_428511.1| PREDICTED: Gallus gallus similar to spore coat protein sp45 (LOC430961), partial mRNA Length = 965 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ctccgccggcaccgtcaccg 365 |||||||||||||||||||| Sbjct: 907 ctccgccggcaccgtcaccg 888
>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227 of 256 of the complete sequence Length = 11399 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcgagcttcgacaaggagttcg 194 ||||||||||||||||||| |||| Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
>gb|AC146078.3| Pan troglodytes BAC clone RP43-45C11 from 7, complete sequence Length = 53091 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cctttctccccatcttcatc 43 |||||||||||||||||||| Sbjct: 30047 cctttctccccatcttcatc 30028
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 1970047 gcgcggcaagatcctcaaca 1970028
>ref|XM_541197.2| PREDICTED: Canis familiaris similar to C-C chemokine receptor type 6 (C-C CKR-6) (CC-CKR-6) (CCR-6) (LARC receptor) (GPR-CY4) (GPRCY4) (Chemokine receptor-like 3) (CKR-L3) (DRY6), transcript variant 1 (LOC484080), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agctgctgatgctggggctg 259 |||||||||||||||||||| Sbjct: 905 agctgctgatgctggggctg 924
>ref|XM_846017.1| PREDICTED: Canis familiaris similar to C-C chemokine receptor type 6 (C-C CKR-6) (CC-CKR-6) (CCR-6) (LARC receptor) (GPR-CY4) (GPRCY4) (Chemokine receptor-like 3) (CKR-L3) (DRY6), transcript variant 2 (LOC484080), mRNA Length = 1549 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agctgctgatgctggggctg 259 |||||||||||||||||||| Sbjct: 1053 agctgctgatgctggggctg 1072
>emb|X74473.1|HPV27 Human papillomavirus type 27 genomic DNA Length = 7823 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gctgctgatgctggggctgg 260 |||||||||||||||||||| Sbjct: 3389 gctgctgatgctggggctgg 3370
>emb|X66125.1|OSPER O.sativa mRNA for peroxidase Length = 1287 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 gacttcgagttcctgggcaa 424 |||||||||||||||||||| Sbjct: 3333298 gacttcgagttcctgggcaa 3333279
>emb|AJ421977.1|SMA421977 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm199 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421975.1|SMA421975 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm8 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421974.1|SMA421974 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm117 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421973.1|SMA421973 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm98 Length = 480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AL669858.8| Mouse DNA sequence from clone RP23-51G7 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene, the Otx1 gene for orthodenticle homolog 1, the 3' end of a novel gene and two CpG islands, complete sequence Length = 240514 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agctgctgatgctggggctg 259 |||||||||||||||||||| Sbjct: 96275 agctgctgatgctggggctg 96294
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 636185 gcgcggcaagatcctcaaca 636204
>gb|AC080038.5| Homo sapiens chromosome 17, clone CTD-3035K23, complete sequence Length = 219122 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cctttctccccatcttcatc 43 |||||||||||||||||||| Sbjct: 193599 cctttctccccatcttcatc 193580
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 338395 gcgcggcaagatcctcaaca 338376
>gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 179 of 460 of the complete genome Length = 10028 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 1720 gcgcggcaagatcctcaaca 1701
>gb|AC093183.3| Homo sapiens chromosome 7 clone RP11-786I1, complete sequence Length = 174133 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cctttctccccatcttcatc 43 |||||||||||||||||||| Sbjct: 27147 cctttctccccatcttcatc 27166
>gb|AC090114.5| Homo sapiens BAC clone RP11-212P7 from 7, complete sequence Length = 91722 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cctttctccccatcttcatc 43 |||||||||||||||||||| Sbjct: 86052 cctttctccccatcttcatc 86071
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcgagcttcgacaaggagttcg 194 ||||||||||||||||||| |||| Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
>gb|AC113295.5| Mus musculus chromosome 5, clone RP23-424M12, complete sequence Length = 239105 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttctccccatcttcatcttc 46 |||||||||||||||||||| Sbjct: 19724 ttctccccatcttcatcttc 19705 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttctccccatcttcatcttc 46 |||||||||||||||||||| Sbjct: 6021 ttctccccatcttcatcttc 6040
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 3067621 gcgcggcaagatcctcaaca 3067640
>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial cds; and TetR family bacterial regulatory protein (ameR), membrane fusion protein (ameA), multidrug efflux transporter RND family protein (ameB), and outer membrane protein (ameC) genes, complete cds Length = 7277 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcgagcttcgacaaggagttcg 194 ||||||||||||||||||| |||| Sbjct: 119 cggcgagcttcgacaaggatttcg 142
>gb|AC110556.15| Mus musculus chromosome 5, clone RP23-250G21, complete sequence Length = 214445 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttctccccatcttcatcttc 46 |||||||||||||||||||| Sbjct: 118640 ttctccccatcttcatcttc 118621 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttctccccatcttcatcttc 46 |||||||||||||||||||| Sbjct: 104937 ttctccccatcttcatcttc 104956
>gb|AC018636.4|AC018636 Homo sapiens chromosome 7 clone RP11-20F2, complete sequence Length = 167592 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cctttctccccatcttcatc 43 |||||||||||||||||||| Sbjct: 127933 cctttctccccatcttcatc 127952
>dbj|AB211993.1| Human papillomavirus type 27b DNA, complete genome Length = 7831 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gctgctgatgctggggctgg 260 |||||||||||||||||||| Sbjct: 3389 gctgctgatgctggggctgg 3370
>gb|AC008026.7| Homo sapiens chromosome 17, clone RP11-464D20, complete sequence Length = 220184 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cctttctccccatcttcatc 43 |||||||||||||||||||| Sbjct: 30083 cctttctccccatcttcatc 30064
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 gacgagatcgacttcgagttcctg 419 |||||||||||||||||| ||||| Sbjct: 4194088 gacgagatcgacttcgagatcctg 4194111
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full insert sequence Length = 1287 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 5273940 gcgcggcaagatcctcaaca 5273921
>gb|AF088856.1|AF088856 Vogesella indigofera indigoidine biosynthesis locus, complete sequence Length = 10249 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ggctggacaaggtctccggc 274 |||||||||||||||||||| Sbjct: 6383 ggctggacaaggtctccggc 6402
>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene for class III peroxidase 111 precursor, exons 1-4 Length = 1250 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
>emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-66N24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196311 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 acctttctccccatcttcatcttc 46 ||||||||| |||||||||||||| Sbjct: 36476 acctttctctccatcttcatcttc 36453
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcaagatcctcaaca 233 |||||||||||||||||||| Sbjct: 5587812 gcgcggcaagatcctcaaca 5587793
>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggctcgcatgggggcgtcggtgct 138 ||||||||||||||||||| |||| Sbjct: 205 ggctcgcatgggggcgtcgctgct 228 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,288,366 Number of Sequences: 3902068 Number of extensions: 3288366 Number of successful extensions: 70724 Number of sequences better than 10.0: 202 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 68633 Number of HSP's gapped (non-prelim): 2049 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
