ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet25h11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469963.1| Oryza sativa (japonica cultivar-group), mRNA Length = 825 Score = 186 bits (94), Expect = 4e-44 Identities = 198/232 (85%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 190 gcgtcggcgcagtccgggtgcacggctgcgctggtcggcctgtacccgtgcatgaactac 249 ||||| |||||| | ||||||||||| |||||| || ||||||||||||| | |||||| Sbjct: 168 gcgtccgcgcagacggggtgcacggcggcgctgatcaacctgtacccgtgcctcaactac 227 Query: 250 atcagcggcagcgacacggcgccgaccaagtcctgctgctcgcagctcgcctccgtcgtg 309 |||||||||| ||| ||| ||||||| | | |||||||||||||||||||| |||| ||| Sbjct: 228 atcagcggcaacgagacgtcgccgacgaggacctgctgctcgcagctcgccaccgtggtg 287 Query: 310 cagtcccagccgcagtgcctctgcaccgctctcggcggtgac---tcctcgtcgctcggc 366 |||||||||||||||||||| ||| | || || |||| ||| || |||||| ||||| Sbjct: 288 cagtcccagccgcagtgcctgtgcgcggcgatcagcggcgactcgtcgtcgtcgatcggc 347 Query: 367 ggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||| ||||||||||||| |||||||| ||| | |||||||||| Sbjct: 348 ggcgtcaccatcgacaagacccgcgccctcgagctccccaaggcctgcaacg 399
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 186 bits (94), Expect = 4e-44 Identities = 198/232 (85%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 190 gcgtcggcgcagtccgggtgcacggctgcgctggtcggcctgtacccgtgcatgaactac 249 ||||| |||||| | ||||||||||| |||||| || ||||||||||||| | |||||| Sbjct: 24056 gcgtccgcgcagacggggtgcacggcggcgctgatcaacctgtacccgtgcctcaactac 24115 Query: 250 atcagcggcagcgacacggcgccgaccaagtcctgctgctcgcagctcgcctccgtcgtg 309 |||||||||| ||| ||| ||||||| | | |||||||||||||||||||| |||| ||| Sbjct: 24116 atcagcggcaacgagacgtcgccgacgaggacctgctgctcgcagctcgccaccgtggtg 24175 Query: 310 cagtcccagccgcagtgcctctgcaccgctctcggcggtgac---tcctcgtcgctcggc 366 |||||||||||||||||||| ||| | || || |||| ||| || |||||| ||||| Sbjct: 24176 cagtcccagccgcagtgcctgtgcgcggcgatcagcggcgactcgtcgtcgtcgatcggc 24235 Query: 367 ggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||| ||||||||||||| |||||||| ||| | |||||||||| Sbjct: 24236 ggcgtcaccatcgacaagacccgcgccctcgagctccccaaggcctgcaacg 24287
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 186 bits (94), Expect = 4e-44 Identities = 198/232 (85%), Gaps = 3/232 (1%) Strand = Plus / Minus Query: 190 gcgtcggcgcagtccgggtgcacggctgcgctggtcggcctgtacccgtgcatgaactac 249 ||||| |||||| | ||||||||||| |||||| || ||||||||||||| | |||||| Sbjct: 32719851 gcgtccgcgcagacggggtgcacggcggcgctgatcaacctgtacccgtgcctcaactac 32719792 Query: 250 atcagcggcagcgacacggcgccgaccaagtcctgctgctcgcagctcgcctccgtcgtg 309 |||||||||| ||| ||| ||||||| | | |||||||||||||||||||| |||| ||| Sbjct: 32719791 atcagcggcaacgagacgtcgccgacgaggacctgctgctcgcagctcgccaccgtggtg 32719732 Query: 310 cagtcccagccgcagtgcctctgcaccgctctcggcggtgac---tcctcgtcgctcggc 366 |||||||||||||||||||| ||| | || || |||| ||| || |||||| ||||| Sbjct: 32719731 cagtcccagccgcagtgcctgtgcgcggcgatcagcggcgactcgtcgtcgtcgatcggc 32719672 Query: 367 ggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||| ||||||||||||| |||||||| ||| | |||||||||| Sbjct: 32719671 ggcgtcaccatcgacaagacccgcgccctcgagctccccaaggcctgcaacg 32719620
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 186 bits (94), Expect = 4e-44 Identities = 198/232 (85%), Gaps = 3/232 (1%) Strand = Plus / Minus Query: 190 gcgtcggcgcagtccgggtgcacggctgcgctggtcggcctgtacccgtgcatgaactac 249 ||||| |||||| | ||||||||||| |||||| || ||||||||||||| | |||||| Sbjct: 32810361 gcgtccgcgcagacggggtgcacggcggcgctgatcaacctgtacccgtgcctcaactac 32810302 Query: 250 atcagcggcagcgacacggcgccgaccaagtcctgctgctcgcagctcgcctccgtcgtg 309 |||||||||| ||| ||| ||||||| | | |||||||||||||||||||| |||| ||| Sbjct: 32810301 atcagcggcaacgagacgtcgccgacgaggacctgctgctcgcagctcgccaccgtggtg 32810242 Query: 310 cagtcccagccgcagtgcctctgcaccgctctcggcggtgac---tcctcgtcgctcggc 366 |||||||||||||||||||| ||| | || || |||| ||| || |||||| ||||| Sbjct: 32810241 cagtcccagccgcagtgcctgtgcgcggcgatcagcggcgactcgtcgtcgtcgatcggc 32810182 Query: 367 ggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||| ||||||||||||| |||||||| ||| | |||||||||| Sbjct: 32810181 ggcgtcaccatcgacaagacccgcgccctcgagctccccaaggcctgcaacg 32810130
>dbj|AK061537.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F10, full insert sequence Length = 999 Score = 186 bits (94), Expect = 4e-44 Identities = 198/232 (85%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 190 gcgtcggcgcagtccgggtgcacggctgcgctggtcggcctgtacccgtgcatgaactac 249 ||||| |||||| | ||||||||||| |||||| || ||||||||||||| | |||||| Sbjct: 166 gcgtccgcgcagacggggtgcacggcggcgctgatcaacctgtacccgtgcctcaactac 225 Query: 250 atcagcggcagcgacacggcgccgaccaagtcctgctgctcgcagctcgcctccgtcgtg 309 |||||||||| ||| ||| ||||||| | | |||||||||||||||||||| |||| ||| Sbjct: 226 atcagcggcaacgagacgtcgccgacgaggacctgctgctcgcagctcgccaccgtggtg 285 Query: 310 cagtcccagccgcagtgcctctgcaccgctctcggcggtgac---tcctcgtcgctcggc 366 |||||||||||||||||||| ||| | || || |||| ||| || |||||| ||||| Sbjct: 286 cagtcccagccgcagtgcctgtgcgcggcgatcagcggcgactcgtcgtcgtcgatcggc 345 Query: 367 ggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||| ||||||||||||| |||||||| ||| | |||||||||| Sbjct: 346 ggcgtcaccatcgacaagacccgcgccctcgagctccccaaggcctgcaacg 397
>dbj|AK058812.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-E04, full insert sequence Length = 825 Score = 186 bits (94), Expect = 4e-44 Identities = 198/232 (85%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 190 gcgtcggcgcagtccgggtgcacggctgcgctggtcggcctgtacccgtgcatgaactac 249 ||||| |||||| | ||||||||||| |||||| || ||||||||||||| | |||||| Sbjct: 168 gcgtccgcgcagacggggtgcacggcggcgctgatcaacctgtacccgtgcctcaactac 227 Query: 250 atcagcggcagcgacacggcgccgaccaagtcctgctgctcgcagctcgcctccgtcgtg 309 |||||||||| ||| ||| ||||||| | | |||||||||||||||||||| |||| ||| Sbjct: 228 atcagcggcaacgagacgtcgccgacgaggacctgctgctcgcagctcgccaccgtggtg 287 Query: 310 cagtcccagccgcagtgcctctgcaccgctctcggcggtgac---tcctcgtcgctcggc 366 |||||||||||||||||||| ||| | || || |||| ||| || |||||| ||||| Sbjct: 288 cagtcccagccgcagtgcctgtgcgcggcgatcagcggcgactcgtcgtcgtcgatcggc 347 Query: 367 ggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||| ||||||||||||| |||||||| ||| | |||||||||| Sbjct: 348 ggcgtcaccatcgacaagacccgcgccctcgagctccccaaggcctgcaacg 399
>gb|AY110426.1| Zea mays CL31361_-2 mRNA sequence Length = 608 Score = 125 bits (63), Expect = 1e-25 Identities = 147/175 (84%) Strand = Plus / Minus Query: 227 gcctgtacccgtgcatgaactacatcagcggcagcgacacggcgccgaccaagtcctgct 286 |||||||||||||| | |||||||||| ||||| || |||||||| | || |||| Sbjct: 606 gcctgtacccgtgcctcaactacatcaacggcaacgtgtcggcgccgccgtcctcgtgct 547 Query: 287 gctcgcagctcgcctccgtcgtgcagtcccagccgcagtgcctctgcaccgctctcggcg 346 |||||||||||||| |||||||||| || | ||||||||||||||| |||| ||| ||| Sbjct: 546 gctcgcagctcgccagcgtcgtgcagaccaacccgcagtgcctctgcgccgcgctcagcg 487 Query: 347 gtgactcctcgtcgctcggcggcgtcaccatcaacaagacccgcgcgctcgagct 401 | ||||||||||| |||||||| |||||| || ||||||| ||||||||| |||| Sbjct: 486 gcgactcctcgtccctcggcggtgtcaccgtcgacaagacgcgcgcgctccagct 432
>ref|XM_476796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 366 cggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||||||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 270 cggcgtcaccatcaacaacacccgcgccctcgagctccccgccgcctgcaacg 322
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 366 cggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||||||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 3943082 cggcgtcaccatcaacaacacccgcgccctcgagctccccgccgcctgcaacg 3943134 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tggccgtggcggtggcggcg 174 |||||||||||||||||||| Sbjct: 22948183 tggccgtggcggtggcggcg 22948164 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 tggccgtggcggtggcggcgctgc 178 |||| ||||||||||||||||||| Sbjct: 18605971 tggcggtggcggtggcggcgctgc 18605948 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 cgtcctcctggccgtggcggtggc 170 |||||||||||||| ||||||||| Sbjct: 4465431 cgtcctcctggccgaggcggtggc 4465408 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 acccgcgcgctcgagctgcccgacgcctgcaa 416 ||||||||||||| || |||||||||||||| Sbjct: 4012733 acccgcgcgctcggcctccccgacgcctgcaa 4012764
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 366 cggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||||||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 182194 cggcgtcaccatcaacaacacccgcgccctcgagctccccgccgcctgcaacg 182246
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 366 cggcgtcaccatcaacaagacccgcgcgctcgagctgcccgacgcctgcaacg 418 |||||||||||||||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 45808 cggcgtcaccatcaacaacacccgcgccctcgagctccccgccgcctgcaacg 45860 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 acccgcgcgctcgagctgcccgacgcctgcaa 416 ||||||||||||| || |||||||||||||| Sbjct: 115459 acccgcgcgctcggcctccccgacgcctgcaa 115490
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 161 tggcggtggcggcgctgctggtgg 184 |||||||||||||||||||||||| Sbjct: 4897920 tggcggtggcggcgctgctggtgg 4897943 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 ctgctggtggcgtcggcgtcggcgcagtccggg 207 |||| ||||||| |||||||||||||| ||||| Sbjct: 4310124 ctgcgggtggcggcggcgtcggcgcagaccggg 4310092
>ref|NM_192333.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1890 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 165 ggtggcggcgctgctggtggcgtcggcgtcggcgc 199 ||||||| |||||||| ||||||||||| |||||| Sbjct: 12 ggtggcgtcgctgctgatggcgtcggcgccggcgc 46
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 161 tggcggtggcggcgctgctggtg 183 ||||||||||||||||||||||| Sbjct: 90228 tggcggtggcggcgctgctggtg 90250
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 165 ggtggcggcgctgctggtggcgtcggcgtcggcgc 199 ||||||| |||||||| ||||||||||| |||||| Sbjct: 26100951 ggtggcgtcgctgctgatggcgtcggcgccggcgc 26100985
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 165 ggtggcggcgctgctggtggcgtcggcgtcggcgc 199 ||||||| |||||||| ||||||||||| |||||| Sbjct: 6368 ggtggcgtcgctgctgatggcgtcggcgccggcgc 6402
>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0038D11 Length = 156465 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 165 ggtggcggcgctgctggtggcgtcggcgtcggcgc 199 ||||||| |||||||| ||||||||||| |||||| Sbjct: 104526 ggtggcgtcgctgctgatggcgtcggcgccggcgc 104560
>gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-D-xylosidase isoenzyme ARA-I mRNA, complete cds Length = 2647 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 152 tcctggccgtggcggtggcggcgctgctggtggcg 186 |||||||| |||| | ||||||||||||||||||| Sbjct: 69 tcctggccatggccgcggcggcgctgctggtggcg 103
>dbj|AK100691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114F24, full insert sequence Length = 2522 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 165 ggtggcggcgctgctggtggcgtcggcgtcggcgc 199 ||||||| |||||||| ||||||||||| |||||| Sbjct: 409 ggtggcgtcgctgctgatggcgtcggcgccggcgc 443
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 gtggcgtcggcgtcggcgcagtc 203 ||||||||||||||||||||||| Sbjct: 125703 gtggcgtcggcgtcggcgcagtc 125725
>ref|XM_588208.2| PREDICTED: Bos taurus similar to Selenoprotein O (LOC510966), mRNA Length = 3194 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 155 tggccgtggcggtggcggcgctgctg 180 ||||||||||||||||||||| |||| Sbjct: 840 tggccgtggcggtggcggcgcggctg 815
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 160 gtggcggtggcggcgctgctggtggcgtcggcgt 193 ||||||| | |||||||||||| ||||||||||| Sbjct: 2716884 gtggcggcgtcggcgctgctggcggcgtcggcgt 2716851 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggcggtggcggcgctgctgg 181 |||||||||||||||||||| Sbjct: 1205411 ggcggtggcggcgctgctgg 1205430
>ref|XM_818056.1| Trypanosoma brucei TREU927 G-actin binding protein (Tb10.6k15.1160) partial mRNA Length = 810 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 155 tggccgtggcggtggcggcgctgctggtggcgtcggcg 192 |||| ||||||||||||| | ||||||||||| ||||| Sbjct: 42 tggcggtggcggtggcggtggtgctggtggcggcggcg 5
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 ggcggcgctgctggtggcgtcg 189 |||||||||||||||||||||| Sbjct: 118660 ggcggcgctgctggtggcgtcg 118681
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 ggcggcgctgctggtggcgtcg 189 |||||||||||||||||||||| Sbjct: 71282 ggcggcgctgctggtggcgtcg 71303
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 ggcggcgctgctggtggcgtcg 189 |||||||||||||||||||||| Sbjct: 337431 ggcggcgctgctggtggcgtcg 337452
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ggcggtggcggcgctgctggtg 183 |||||||||||||||||||||| Sbjct: 2650535 ggcggtggcggcgctgctggtg 2650514
>gb|DQ214835.1| Taeniopygia guttata clone 0061P0010F12 membrane targeting translocation system protein like mRNA, complete sequence Length = 1231 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 gtggcggcgctgctggtggcgtcgg 190 ||||||||||||||||||| ||||| Sbjct: 178 gtggcggcgctgctggtggtgtcgg 202
>gb|DQ214834.1| Taeniopygia guttata clone 0058P0060C04 membrane targeting translocation system protein like mRNA, complete sequence Length = 921 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 gtggcggcgctgctggtggcgtcgg 190 ||||||||||||||||||| ||||| Sbjct: 178 gtggcggcgctgctggtggtgtcgg 202
>gb|DQ214833.1| Taeniopygia guttata clone 0063P0009H08 membrane targeting translocation system protein like mRNA, complete sequence Length = 1032 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 gtggcggcgctgctggtggcgtcgg 190 ||||||||||||||||||| ||||| Sbjct: 191 gtggcggcgctgctggtggtgtcgg 215
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gctgctggtggcgtcggcgtc 194 ||||||||||||||||||||| Sbjct: 669171 gctgctggtggcgtcggcgtc 669191
>ref|XM_617975.2| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 1 (LOC537791), mRNA Length = 3295 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ggccgtggcggtggcggcgctgctg 180 ||||| ||||||||||||||||||| Sbjct: 167 ggccgaggcggtggcggcgctgctg 191
>ref|XM_875665.1| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 2 (LOC537791), mRNA Length = 4617 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ggccgtggcggtggcggcgctgctg 180 ||||| ||||||||||||||||||| Sbjct: 147 ggccgaggcggtggcggcgctgctg 171
>gb|BC022220.1| Homo sapiens AE binding protein 2, mRNA (cDNA clone MGC:17922 IMAGE:3914323), complete cds Length = 3629 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ggccgtggcggtggcggcgctgctg 180 ||||| ||||||||||||||||||| Sbjct: 151 ggccgaggcggtggcggcgctgctg 175
>ref|NM_153207.3| Homo sapiens AE binding protein 2 (AEBP2), mRNA Length = 4072 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ggccgtggcggtggcggcgctgctg 180 ||||| ||||||||||||||||||| Sbjct: 151 ggccgaggcggtggcggcgctgctg 175
>ref|XM_838167.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1084) partial mRNA Length = 2043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 gctgctggtggcgtcggcgtc 194 ||||||||||||||||||||| Sbjct: 1528 gctgctggtggcgtcggcgtc 1508
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tggcggtggcggcgctgctggtggc 185 ||||||||||||| ||||||||||| Sbjct: 5467670 tggcggtggcggctctgctggtggc 5467694
>dbj|AK131361.1| Homo sapiens cDNA FLJ16400 fis, clone TUTER2000057, moderately similar to Mus musculus AE-1 binding protein AEBP2 mRNA Length = 2235 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ggccgtggcggtggcggcgctgctg 180 ||||| ||||||||||||||||||| Sbjct: 176 ggccgaggcggtggcggcgctgctg 200
>gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177115 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 156 ggccgtggcggtggcggcgctgctg 180 ||||| ||||||||||||||||||| Sbjct: 107687 ggccgaggcggtggcggcgctgctg 107663
>gb|AY074937.2| Pseudomonas fluorescens SBW25 wsp operon, complete sequence Length = 13288 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 cggtggcggcgctgctggtggcgtc 188 |||||||| |||||||||||||||| Sbjct: 8402 cggtggcgccgctgctggtggcgtc 8378
>gb|AE004453.1| Pseudomonas aeruginosa PAO1, section 14 of 529 of the complete genome Length = 14568 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ctggtcggcctgtacccgtgc 240 ||||||||||||||||||||| Sbjct: 9389 ctggtcggcctgtacccgtgc 9369
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 gtggcggtggcggcgctgctg 180 ||||||||||||||||||||| Sbjct: 181148 gtggcggtggcggcgctgctg 181168
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 ccgcgcgctcgagctgcccga 407 ||||||||||||||||||||| Sbjct: 2408026 ccgcgcgctcgagctgcccga 2408046
>ref|XM_482595.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ctcctggccgtggcggtggcggcg 174 ||||||||||||||||||| |||| Sbjct: 926 ctcctggccgtggcggtggaggcg 949
>ref|NM_197179.1| Oryza sativa (japonica cultivar-group) putative prolyl 4-hydroxylase, alpha subunit (OSJNBa0017E08.15), mRNA Length = 1032 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tggcggcgctgctggtggcgtcgg 190 |||||||||||||| ||||||||| Sbjct: 134 tggcggcgctgctgctggcgtcgg 157
>ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 tggccgtggcggtggcggcgctgc 178 |||| ||||||||||||||||||| Sbjct: 408 tggcggtggcggtggcggcgctgc 431
>ref|XM_478771.1| Oryza sativa (japonica cultivar-group), mRNA Length = 724 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tggccgtggcggtggcggcg 174 |||||||||||||||||||| Sbjct: 302 tggccgtggcggtggcggcg 321
>ref|XM_476891.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1758 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 cgtcctcctggccgtggcggtggc 170 |||||||||||||| ||||||||| Sbjct: 544 cgtcctcctggccgaggcggtggc 521
>ref|XM_476809.1| Oryza sativa (japonica cultivar-group), mRNA Length = 886 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 acccgcgcgctcgagctgcccgacgcctgcaa 416 ||||||||||||| || |||||||||||||| Sbjct: 371 acccgcgcgctcggcctccccgacgcctgcaa 402
>ref|XM_506191.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1656_E11.137 mRNA Length = 887 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 acccgcgcgctcgagctgcccgacgcctgcaa 416 ||||||||||||| || |||||||||||||| Sbjct: 373 acccgcgcgctcggcctccccgacgcctgcaa 404
>ref|XM_473111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 ggcggtggcggcgctgctggtggc 185 |||||||||||||||||| ||||| Sbjct: 36 ggcggtggcggcgctgctcgtggc 59
>ref|XM_472261.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1257 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gcgagagcgagagcggtggc 125 |||||||||||||||||||| Sbjct: 247 gcgagagcgagagcggtggc 266
>ref|NM_009451.3| Mus musculus tubulin, beta 4 (Tubb4), mRNA Length = 2246 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggtggcggcgctgctggtggcgtc 188 ||||| |||||||||||||||||| Sbjct: 269 ggtggtggcgctgctggtggcgtc 246
>gb|AC151808.1| Homo sapiens chromosome X clone RP11-1148L6 map p11.23, complete sequence Length = 37971 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aggaaaccaagggggaaaac 91 |||||||||||||||||||| Sbjct: 13895 aggaaaccaagggggaaaac 13876
>gb|AC115618.3| Homo sapiens chromosome X clone RP11-1148L6 map p11.23, complete sequence Length = 158454 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aggaaaccaagggggaaaac 91 |||||||||||||||||||| Sbjct: 24565 aggaaaccaagggggaaaac 24546
>gb|AY822041.2| Pimelobacter simplex strain 3E hypothetical threonine tRNA synthetase, hypothetical protein, hypothetical monooxygenase, hypothetical regulator Fis-type, putative regulator AraC-type (chqR), chlorohydroquinone monooxygenase (chqA), maleylacetate reductase (chqC), hydroxyquinol 1,2-dioxygenase (chqB), and hypothetical regulator LysR-type genes, complete cds Length = 11533 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tggcggtggcggcgctgctg 180 |||||||||||||||||||| Sbjct: 5187 tggcggtggcggcgctgctg 5206
>gb|AY659300.1| Synthetic construct Peudomonas aeruginosa clone FLH037301.01F PA3336 gene, partial cds Length = 1167 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gtggcggtggcggcgctgctggtg 183 |||||||||||||||||| ||||| Sbjct: 871 gtggcggtggcggcgctggtggtg 894
>gb|BC049112.1| Mus musculus tubulin, beta 4, mRNA (cDNA clone MGC:61383 IMAGE:6415577), complete cds Length = 2246 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggtggcggcgctgctggtggcgtc 188 ||||| |||||||||||||||||| Sbjct: 269 ggtggtggcgctgctggtggcgtc 246
>gb|BC054831.1| Mus musculus tubulin, beta 4, mRNA (cDNA clone MGC:62570 IMAGE:6306945), complete cds Length = 2058 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggtggcggcgctgctggtggcgtc 188 ||||| |||||||||||||||||| Sbjct: 68 ggtggtggcgctgctggtggcgtc 45
>ref|NM_153052.1| Mus musculus granzyme N (Gzmn), mRNA Length = 972 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggggaaaacgtccatcaat 101 |||||||||||||||||||| Sbjct: 542 gggggaaaacgtccatcaat 561
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 cccgcgcgctcgagctgcccgacg 409 |||||||||||||| ||||||||| Sbjct: 2956847 cccgcgcgctcgagttgcccgacg 2956870
>ref|XM_382135.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01959.1) partial mRNA Length = 1611 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtggcggcgctgctggtggc 185 |||||||||||||||||||| Sbjct: 1052 gtggcggcgctgctggtggc 1033
>ref|XM_752045.1| Ustilago maydis 521 hypothetical protein (UM00991.1) partial mRNA Length = 2313 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tggcggcgagagcgagagcg 120 |||||||||||||||||||| Sbjct: 2170 tggcggcgagagcgagagcg 2151
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tgctggtggcgtcggcgtcg 195 |||||||||||||||||||| Sbjct: 3683987 tgctggtggcgtcggcgtcg 3684006
>gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosome 7, complete sequence Length = 202404 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cacacaaggcaagcaagcac 23 |||||||||||||||||||| Sbjct: 121893 cacacaaggcaagcaagcac 121912
>emb|CR700426.2|CNS0G3EE Tetraodon nigroviridis full-length cDNA Length = 1033 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cctcctggccgtggcggtgg 169 |||||||||||||||||||| Sbjct: 787 cctcctggccgtggcggtgg 806
>emb|CR698808.2|CNS0G25G Tetraodon nigroviridis full-length cDNA Length = 1088 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cctcctggccgtggcggtgg 169 |||||||||||||||||||| Sbjct: 806 cctcctggccgtggcggtgg 825
>gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G10, complete sequence Length = 228160 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gggggaaaacgtccatcaat 101 |||||||||||||||||||| Sbjct: 106074 gggggaaaacgtccatcaat 106055
>emb|AL772262.4| Human DNA sequence from clone RP11-444C24 on chromosome X, complete sequence Length = 147079 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 aagaaatctctttcactagg 74 |||||||||||||||||||| Sbjct: 31034 aagaaatctctttcactagg 31015
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 cccgcgcgctcgagctgcccgacg 409 |||||||||||||| ||||||||| Sbjct: 1135414 cccgcgcgctcgagttgcccgacg 1135437
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggtggcggcgctgctggtgg 184 |||||||||||||||||||| Sbjct: 34260 ggtggcggcgctgctggtgg 34241
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tggccgtggcggtggcggcg 174 |||||||||||||||||||| Sbjct: 82231 tggccgtggcggtggcggcg 82250
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 ggcggtggcggcgctgctggtggc 185 |||||||||||||||||| ||||| Sbjct: 126280 ggcggtggcggcgctgctcgtggc 126303
>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21, complete sequence Length = 143093 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gcgagagcgagagcggtggc 125 |||||||||||||||||||| Sbjct: 87207 gcgagagcgagagcggtggc 87188
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 ggcggtggcggcgctgctggtggc 185 |||||||||||||||||| ||||| Sbjct: 68900 ggcggtggcggcgctgctcgtggc 68923
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tggcggcgctgctggtggcgtcgg 190 |||||||||||||| ||||||||| Sbjct: 41086 tggcggcgctgctgctggcgtcgg 41063
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cgtggcggtggcggcgctgc 178 |||||||||||||||||||| Sbjct: 3463650 cgtggcggtggcggcgctgc 3463669
>dbj|AK013717.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900057E16 product:tubulin beta-4 chain homolog [Mus musculus], full insert sequence Length = 2046 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggtggcggcgctgctggtggcgtc 188 ||||| |||||||||||||||||| Sbjct: 87 ggtggtggcgctgctggtggcgtc 64
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ggccgtggcggtggcggcgc 175 |||||||||||||||||||| Sbjct: 288544 ggccgtggcggtggcggcgc 288563
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 cgctcggcggcgtcaccatcaaca 382 |||||| ||||||||||||||||| Sbjct: 4394663 cgctcgccggcgtcaccatcaaca 4394686
>gb|AC008286.11|AC008286 Drosophila melanogaster, chromosome 3R, region 99F-99F, BAC clone BACR22M06, complete sequence Length = 154003 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcagcggcagcgacacggcg 270 |||||||||||||||||||| Sbjct: 40084 tcagcggcagcgacacggcg 40103
>gb|AF337540.1|AF337540 Myotis daubentoni alpha adrenergic receptor 2B (aar2B) gene, partial cds Length = 1179 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tggtggcgtcggcgtcggcg 198 |||||||||||||||||||| Sbjct: 1015 tggtggcgtcggcgtcggcg 1034
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 cccgcgcgctcgagctgcccgacg 409 |||||||||||||| ||||||||| Sbjct: 729956 cccgcgcgctcgagttgcccgacg 729979
>gb|AC009338.12|AC009338 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone BACR08B24, complete sequence Length = 157235 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcagcggcagcgacacggcg 270 |||||||||||||||||||| Sbjct: 124406 tcagcggcagcgacacggcg 124425
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 ggcggtggcggcgctgctggtggc 185 |||||||||||||||||| ||||| Sbjct: 25342341 ggcggtggcggcgctgctcgtggc 25342364 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gcgagagcgagagcggtggc 125 |||||||||||||||||||| Sbjct: 18871297 gcgagagcgagagcggtggc 18871278
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ctgctggtggcgtcggcgtcggcg 198 |||| ||||||||||||||||||| Sbjct: 10048458 ctgccggtggcgtcggcgtcggcg 10048435
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tggcggcgctgctggtggcgtcgg 190 |||||||||||||| ||||||||| Sbjct: 18465607 tggcggcgctgctgctggcgtcgg 18465630
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 174 gctgctggtggcgtcggcgtcggcgcag 201 ||||||||||||| ||||| |||||||| Sbjct: 22146913 gctgctggtggcgacggcggcggcgcag 22146886
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ctcctggccgtggcggtggcggcg 174 ||||||||||||||||||| |||| Sbjct: 21313857 ctcctggccgtggcggtggaggcg 21313834
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 gctgctggtggcgtcggcgtcggc 197 |||||||| ||||||||||||||| Sbjct: 1224384 gctgctggaggcgtcggcgtcggc 1224361
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ctggccgtggcggtggcggcgctg 177 |||||||||||| ||||||||||| Sbjct: 8582518 ctggccgtggcgctggcggcgctg 8582495
>gb|AE004756.1| Pseudomonas aeruginosa PAO1, section 317 of 529 of the complete genome Length = 11039 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gtggcggtggcggcgctgctggtg 183 |||||||||||||||||| ||||| Sbjct: 1804 gtggcggtggcggcgctggtggtg 1827
>gb|AE004589.1| Pseudomonas aeruginosa PAO1, section 150 of 529 of the complete genome Length = 12948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tggcggtggcggcgctgctg 180 |||||||||||||||||||| Sbjct: 12684 tggcggtggcggcgctgctg 12703
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 tggccgtggcggtggcggcgctgc 178 |||| ||||||||||||||||||| Sbjct: 31025 tggcggtggcggtggcggcgctgc 31002
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 tggccgtggcggtggcggcgctgc 178 |||| ||||||||||||||||||| Sbjct: 58513 tggcggtggcggtggcggcgctgc 58490
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 cgtcctcctggccgtggcggtggc 170 |||||||||||||| ||||||||| Sbjct: 44150 cgtcctcctggccgaggcggtggc 44127
>dbj|AB049454.2| Mus musculus GrN mRNA for granzyme N, complete cds Length = 975 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggggaaaacgtccatcaat 101 |||||||||||||||||||| Sbjct: 545 gggggaaaacgtccatcaat 564
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 174 gctgctggtggcgtcggcgtcggcgcag 201 ||||||||||||| ||||| |||||||| Sbjct: 68406 gctgctggtggcgacggcggcggcgcag 68379
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cggcggcgtcaccatcaaca 382 |||||||||||||||||||| Sbjct: 4114806 cggcggcgtcaccatcaaca 4114787
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cggcagcgacacggcgccga 274 |||||||||||||||||||| Sbjct: 3234015 cggcagcgacacggcgccga 3233996
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 gctgctggtggcgtcggcgtcggc 197 |||||||| ||||||||||||||| Sbjct: 76337 gctgctggaggcgtcggcgtcggc 76314
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 cgtcctcctggccgtggcggtggc 170 |||||||||||||| ||||||||| Sbjct: 105280 cgtcctcctggccgaggcggtggc 105257
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tggccgtggcggtggcggcg 174 |||||||||||||||||||| Sbjct: 23397 tggccgtggcggtggcggcg 23378
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 acccgcgcgctcgagctgcccgacgcctgcaa 416 ||||||||||||| || |||||||||||||| Sbjct: 5591 acccgcgcgctcggcctccccgacgcctgcaa 5622
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ctcctggccgtggcggtggcggcg 174 ||||||||||||||||||| |||| Sbjct: 140134 ctcctggccgtggcggtggaggcg 140111
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ctcctggccgtggcggtggcggcg 174 ||||||||||||||||||| |||| Sbjct: 13782 ctcctggccgtggcggtggaggcg 13759
>dbj|AK121383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I10, full insert sequence Length = 1929 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 ggcggtggcggcgctgctggtggc 185 |||||||||||||||||| ||||| Sbjct: 538 ggcggtggcggcgctgctcgtggc 561
>dbj|AK120584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136I05, full insert sequence Length = 1373 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tggcggcgctgctggtggcgtcgg 190 |||||||||||||| ||||||||| Sbjct: 227 tggcggcgctgctgctggcgtcgg 250
>dbj|AB100426.1| Mus musculus GzmN-2 mRNA for granzyme N-2, complete cds Length = 1006 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggggaaaacgtccatcaat 101 |||||||||||||||||||| Sbjct: 545 gggggaaaacgtccatcaat 564
>dbj|AK108722.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C03, full insert sequence Length = 724 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tggccgtggcggtggcggcg 174 |||||||||||||||||||| Sbjct: 302 tggccgtggcggtggcggcg 321
>dbj|AK104966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C08, full insert sequence Length = 886 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 acccgcgcgctcgagctgcccgacgcctgcaa 416 ||||||||||||| || |||||||||||||| Sbjct: 371 acccgcgcgctcggcctccccgacgcctgcaa 402
>dbj|AK073569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042C03, full insert sequence Length = 887 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 acccgcgcgctcgagctgcccgacgcctgcaa 416 ||||||||||||| || |||||||||||||| Sbjct: 372 acccgcgcgctcggcctccccgacgcctgcaa 403
>dbj|AK071152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077M16, full insert sequence Length = 1570 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ctgctggtggcgtcggcgtcggcg 198 |||| ||||||||||||||||||| Sbjct: 110 ctgccggtggcgtcggcgtcggcg 87
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ggcgctgctggtggcgtcgg 190 |||||||||||||||||||| Sbjct: 1325097 ggcgctgctggtggcgtcgg 1325078
>gb|AC154829.2| Mus musculus BAC clone RP24-550F10 from 14, complete sequence Length = 136754 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gggggaaaacgtccatcaat 101 |||||||||||||||||||| Sbjct: 25171 gggggaaaacgtccatcaat 25152
>emb|CT571247.13| Mouse DNA sequence from clone RP24-116C19 on chromosome 17, complete sequence Length = 137161 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ggtggcggcgctgctggtggcgtc 188 ||||| |||||||||||||||||| Sbjct: 105880 ggtggtggcgctgctggtggcgtc 105903
>gb|AE003773.2| Drosophila melanogaster chromosome 3R, section 111 of 118 of the complete sequence Length = 226904 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcagcggcagcgacacggcg 270 |||||||||||||||||||| Sbjct: 134145 tcagcggcagcgacacggcg 134164
>gb|DQ229199.1| Phytophthora ramorum elicitin-like protein RAL13E gene, complete cds Length = 477 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ggtggcgtcggcgtcggcgc 199 |||||||||||||||||||| Sbjct: 378 ggtggcgtcggcgtcggcgc 359
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cgcgctcgagctgcccgacg 409 |||||||||||||||||||| Sbjct: 2771140 cgcgctcgagctgcccgacg 2771159
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tggcggcgctgctggtggcgtcgg 190 |||||||||||||| ||||||||| Sbjct: 18475660 tggcggcgctgctgctggcgtcgg 18475683
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ctgctggtggcgtcggcgtcggcg 198 |||| ||||||||||||||||||| Sbjct: 10048343 ctgccggtggcgtcggcgtcggcg 10048320
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ctgctggtggcgtcggcgtcggcg 198 |||| ||||||||||||||||||| Sbjct: 114163 ctgccggtggcgtcggcgtcggcg 114186
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132906 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ctgctggtggcgtcggcgtcggcg 198 |||| ||||||||||||||||||| Sbjct: 9616 ctgccggtggcgtcggcgtcggcg 9639
>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete sequence Length = 215366 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cacacaaggcaagcaagcac 23 |||||||||||||||||||| Sbjct: 46312 cacacaaggcaagcaagcac 46331 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,105,339 Number of Sequences: 3902068 Number of extensions: 3105339 Number of successful extensions: 83816 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79252 Number of HSP's gapped (non-prelim): 4558 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
