ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet25f09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 280 bits (141), Expect = 3e-72 Identities = 183/197 (92%) Strand = Plus / Plus Query: 163 tccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcg 222 ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 955 tccttcggcgagggccgcatcaccatgcgcaagaccgtgggcaagcccaaggtggcggcg 1014 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 ||| ||||||| ||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 1015 tccggcagcccctggtacggccccgaccgcgtcaagtacctcggccccttctccggcgag 1074 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1075 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 1134 Query: 343 tccgctgaccccgagac 359 ||||| ||||||||||| Sbjct: 1135 tccgccgaccccgagac 1151 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 103 accatggcgctctcctccccggcgatggccggcacccc 140 ||||||||| |||||||| ||||||||||||||||||| Sbjct: 904 accatggcgatctcctccacggcgatggccggcacccc 941
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 262 bits (132), Expect = 7e-67 Identities = 180/196 (91%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 |||||| |||| ||| |||||||||||||||| |||| |||| ||||| || | |||| Sbjct: 141 cttcggggaggcgcgcgtcaccatgcgcaagaccgcggccaaggccaagccggtgtcgtc 200 Query: 225 cagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccc 284 | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 cggcagcccgtggtacgggtccgaccgcgtgctctacctcggcccgctctccggcgaccc 260 Query: 285 cccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtc 344 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cccgagctacctcaccggcgagttccccggcgactacgggtgggacaccgcggggctgtc 320 Query: 345 cgctgaccccgagacc 360 || |||||||||||| Sbjct: 321 ggccgaccccgagacc 336
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 234 bits (118), Expect = 2e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 64 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 123 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 124 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 183 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 184 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 243 Query: 346 gctgaccccgagac 359 || ||||| ||||| Sbjct: 244 gccgacccggagac 257
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 234 bits (118), Expect = 2e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 23603607 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 23603666 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 23603667 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 23603726 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 23603727 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 23603786 Query: 346 gctgaccccgagac 359 || ||||| ||||| Sbjct: 23603787 gccgacccggagac 23603800 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 30024410 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 30024469 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 30024470 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 30024529 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 30024530 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 30024589 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 30024590 tcggccgacccggagac 30024606 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 37443416 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37443369 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ccggcgagttccccggcgactacggctgggacaccgc 335 |||| |||||||||||| |||||||||| || ||||| Sbjct: 37443372 ccggtgagttccccggctactacggctgagataccgc 37443336
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 234 bits (118), Expect = 2e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 66306 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 66365 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 66366 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 66425 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 66426 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 66485 Query: 346 gctgaccccgagac 359 || ||||| ||||| Sbjct: 66486 gccgacccggagac 66499
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 234 bits (118), Expect = 2e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 135 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 194 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 195 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 254 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 255 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 314 Query: 346 gctgaccccgagac 359 || ||||| ||||| Sbjct: 315 gccgacccggagac 328
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 234 bits (118), Expect = 2e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtcc 225 ||||||||||| |||||||||||||||||| |||||| ||||||||| || ||||| Sbjct: 134 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 193 Query: 226 agcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccc 285 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 194 gggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccg 253 Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 254 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 313 Query: 346 gctgaccccgagac 359 || ||||| ||||| Sbjct: 314 gccgacccggagac 327
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 73 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 132 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 133 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 192 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 193 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 252 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 253 tcggccgacccggagac 269
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 14601 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 14542 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 14541 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 14482 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14481 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 14422 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 14421 tcggccgacccggagac 14405
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 20400 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 20459 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20460 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 20519 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20520 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 20579 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 20580 tcggccgacccggagac 20596
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 154 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 213 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 214 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 273 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 274 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 333 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 334 tcggccgacccggagac 350
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 154 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 213 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 214 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 273 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 274 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 333 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 334 tcggccgacccggagac 350
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 156 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 215 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 216 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 275 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 276 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 335 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 336 tcggccgacccggagac 352
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 220 bits (111), Expect = 2e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 156 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 215 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 216 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 275 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 276 ccgccgtcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 335 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 336 tcggccgacccggagac 352
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 212 bits (107), Expect = 6e-52 Identities = 175/197 (88%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||||||| |||| ||||||||| |||||| |||||||||| | |||||| Sbjct: 115 ttcggcgagggccgcgtcacgatgcgcaagtcggcggccaagcccaagcccgccgcggcg 174 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 175 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgag 234 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 || ||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 235 ccgccgtcctacctcaccggcgagttctccggcgactacggctgggacaccgccgggctg 294 Query: 343 tccgctgaccccgagac 359 || || ||||| ||||| Sbjct: 295 tcggccgacccggagac 311
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 10793056 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 10793115 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 10793116 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 10793175 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 10793176 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 10793235 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 10793236 ctccgccgacccggagac 10793253 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 10792987 ggccgcggccaccatggcgctctcctccccggtgatggcc 10793026
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 16779 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 16838 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 16839 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 16898 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 16899 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 16958 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 16959 ctccgccgacccggagac 16976 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 16710 ggccgcggccaccatggcgctctcctccccggtgatggcc 16749
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 129674 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 129733 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 129734 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 129793 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 129794 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 129853 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 129854 ctccgccgacccggagac 129871 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 129605 ggccgcggccaccatggcgctctcctccccggtgatggcc 129644
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 198 bits (100), Expect = 9e-48 Identities = 176/200 (88%), Gaps = 6/200 (3%) Strand = Plus / Plus Query: 166 ttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtggcggcg 222 ||||||||||| |||||||||||||||||| |||||| ||||||||| | ||| || Sbjct: 558 ttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcg 617 Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggc--- 279 || | ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 618 tcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggccgc 677 Query: 280 gaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcgggg 339 || || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 678 gagccgccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcgggg 737 Query: 340 ctgtccgctgaccccgagac 359 || ||||| ||||| ||||| Sbjct: 738 ctctccgccgacccggagac 757
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 124 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 183 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 184 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 243 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 244 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 303 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 304 ctccgccgacccggagac 321 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 55 ggccgcggccaccatggcgctctcctccccggtgatggcc 94
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 129 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 188 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 189 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 248 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 249 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 308 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 309 ctccgccgacccggagac 326 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 60 ggccgcggccaccatggcgctctcctccccggtgatggcc 99
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 131 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 190 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 191 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 250 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 251 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 310 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 311 ctccgccgacccggagac 328 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 62 ggccgcggccaccatggcgctctcctccccggtgatggcc 101
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 129 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 188 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 189 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 248 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 249 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 308 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 309 ctccgccgacccggagac 326 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 60 ggccgcggccaccatggcgctctcctccccggtgatggcc 99
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 129 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 188 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 189 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 248 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 249 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 308 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 309 ctccgccgacccggagac 326 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 60 ggccgcggccaccatggcgctctcctccccggtgatggcc 99
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 198 bits (100), Expect = 9e-48 Identities = 174/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 110 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 169 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 | ||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 170 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcga 229 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 230 gccgccgagctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggct 289 Query: 342 gtccgctgaccccgagac 359 ||||| ||||| ||||| Sbjct: 290 ctccgccgacccggagac 307 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 41 ggccgcggccaccatggcgctctcctccccggtgatggcc 80
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 190 bits (96), Expect = 2e-45 Identities = 176/202 (87%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 161 cgtccttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaag---gtgg 217 ||||||||||||||| |||| | || |||||||||||||||| ||| ||||| | || Sbjct: 132 cgtccttcggcgaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagccagcgg 191 Query: 218 cggcgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccg 277 |||||||| | ||||||||||||||| ||||||||||||| ||||| ||||| || |||| Sbjct: 192 cggcgtccgggagcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccg 251 Query: 278 gcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcgg 337 |||| || ||||||||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct: 252 gcgagccgccgagctacctgacgggcgagttcccgggcgactacggctgggacaccgcgg 311 Query: 338 ggctgtccgctgaccccgagac 359 ||||||| || ||||| ||||| Sbjct: 312 ggctgtcggcggacccggagac 333
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 190 bits (96), Expect = 2e-45 Identities = 173/198 (87%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcg-- 222 ||||||||||| |||| | || |||||||||||||||| ||| | ||| ||||||| Sbjct: 84 cttcggcgaggcccgcgtgacgatgcgcaagacggcggcgaaggcaaagccggcggcgag 143 Query: 223 -tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcga 281 ||| ||||||||||||||||| ||||||||||||||||||| ||||| || |||||||| Sbjct: 144 ctccggcagcccgtggtacggccccgaccgcgtgctctacctgggcccactgtccggcga 203 Query: 282 ccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggct 341 |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 204 gcccccgagctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggct 263 Query: 342 gtccgctgaccccgagac 359 ||| || ||||| ||||| Sbjct: 264 gtcggcggacccggagac 281
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 182 bits (92), Expect = 5e-43 Identities = 170/196 (86%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||||||||||||||||||||||||| || | |||||||||| |||| || Sbjct: 1998 cttcggcgagggccgcatcaccatgcgcaagaccgccgccaagcccaagccggcgcgctc 2057 Query: 225 cagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccc 284 | ||||||| |||||||| |||||||||| || ||||| |||||||| |||||| || Sbjct: 2058 cggcagcccctggtacggtgccgaccgcgtcctgtacctgggcccgctgtccggctcacc 2117 Query: 285 cccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtc 344 ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 2118 tccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgaggggctgtc 2177 Query: 345 cgctgaccccgagacc 360 || ||||| |||||| Sbjct: 2178 ggcggacccggagacc 2193
>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni Length = 312 Score = 180 bits (91), Expect = 2e-42 Identities = 163/186 (87%), Gaps = 7/186 (3%) Strand = Plus / Plus Query: 175 ggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtccagcagcccg 234 ||||||||||||||||||||||| |||| |||||| || | |||||||||||| Sbjct: 132 ggccgcatcaccatgcgcaagaccgcgg------ccaaggctgccacctccagcagcccg 185 Query: 235 tggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccccccgagctac 294 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 186 tggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccgagctac 245 Query: 295 ctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgacccc 354 |||| ||||||||| || ||||| ||||||||||||||||| ||| | || |||||||| Sbjct: 246 ctcagcggcgagtt-ccgggcgattacggctgggacaccgcaggggtctctgctgacccg 304 Query: 355 gagacc 360 |||||| Sbjct: 305 gagacc 310 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 101 cgaccatggcgctctcctccccggcgatg 129 |||||||||||||||||||||| |||||| Sbjct: 70 cgaccatggcgctctcctcccccgcgatg 98
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 176 bits (89), Expect = 3e-41 Identities = 174/201 (86%), Gaps = 6/201 (2%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtc 224 ||||||||||| || ||||||||||||||||| || | ||||||||| ||||||||| Sbjct: 518 cttcggcgaggcgcggatcaccatgcgcaagaccgccgcgaagcccaagccggcggcgtc 577 Query: 225 ca---gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggc-- 279 | ||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 578 gtcggggagcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcgggccg 637 Query: 280 -gaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggg 338 || || |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 638 cgagccgccgagctacctcaccggcgagttccccggcgactacgggtgggacaccgcggg 697 Query: 339 gctgtccgctgaccccgagac 359 ||| ||||| ||||| ||||| Sbjct: 698 gctctccgccgacccggagac 718 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 93 ggccgcggcgaccatggcgctctcctccccggcgatggcc 132 ||||||||| |||||||||||||||||||||| ||||||| Sbjct: 449 ggccgcggccaccatggcgctctcctccccggtgatggcc 488
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 170 bits (86), Expect = 2e-39 Identities = 154/176 (87%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 187 atgcgcaagacggcgggcaagcccaag---gtggcggcgtccagcagcccgtggtacggc 243 |||||||||||||||| ||| ||||| | |||||||||| | ||||||||||||||| Sbjct: 1106 atgcgcaagacggcggcgaaggccaagccagcggcggcgtccgggagcccgtggtacggc 1165 Query: 244 tccgaccgcgtgctctacctcggcccgctctccggcgaccccccgagctacctcaccggc 303 ||||||||||||| ||||| ||||| || |||||||| || ||||||||||| || ||| Sbjct: 1166 cccgaccgcgtgctgtacctgggcccactgtccggcgagccgccgagctacctgacgggc 1225 Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1226 gagttcccgggcgactacggctgggacaccgcggggctgtcggcggacccggagac 1281
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 170 bits (86), Expect = 2e-39 Identities = 154/176 (87%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 187 atgcgcaagacggcgggcaagcccaag---gtggcggcgtccagcagcccgtggtacggc 243 |||||||||||||||| ||| ||||| | |||||||||| | ||||||||||||||| Sbjct: 1106 atgcgcaagacggcggcgaaggccaagccagcggcggcgtccgggagcccgtggtacggc 1165 Query: 244 tccgaccgcgtgctctacctcggcccgctctccggcgaccccccgagctacctcaccggc 303 ||||||||||||| ||||| ||||| || |||||||| || ||||||||||| || ||| Sbjct: 1166 cccgaccgcgtgctgtacctgggcccactgtccggcgagccgccgagctacctgacgggc 1225 Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1226 gagttcccgggcgactacggctgggacaccgcggggctgtcggcggacccggagac 1281
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 143 bits (72), Expect = 4e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 221 cgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcg 280 |||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 334 cgtcgagcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttccggcg 393 Query: 281 accccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggc 340 | ||||| |||||| | || || ||||||||||| ||||| || ||||||||||| |||| Sbjct: 394 agccccccagctacttgactggtgagttccccggtgactatgggtgggacaccgccgggc 453 Query: 341 tgtccgctgaccccgagacc 360 | || |||||||| |||||| Sbjct: 454 tctcggctgaccctgagacc 473
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 221 cgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcg 280 |||| |||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||| Sbjct: 129 cgtcgagcagcccgtggtacggctctgaccgtgtgctctacctcggctcgctttccggcg 188 Query: 281 accccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggc 340 | ||||| |||||| | || || ||||||||||| ||||| || ||||||||||| |||| Sbjct: 189 aaccccccagctacttgactggtgagttccccggtgactatgggtgggacaccgccgggc 248 Query: 341 tgtccgctgaccccgagacc 360 | || |||||||| |||||| Sbjct: 249 tctcggctgaccctgagacc 268
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 129 bits (65), Expect = 7e-27 Identities = 161/193 (83%) Strand = Plus / Plus Query: 168 cggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtccag 227 |||||| || ||| |||| ||||||||||| || | |||||||||| || ||||| | Sbjct: 135 cggcgacggacgcttcacgatgcgcaagaccgccgccaagcccaagacggtctcgtccgg 194 Query: 228 cagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccccc 287 |||||||||||||||| | ||||| || |||||||||||| |||||||||| |||| Sbjct: 195 cagcccgtggtacggcccggaccgtgtcaagtacctcggcccgttctccggcgaggcccc 254 Query: 288 gagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgc 347 |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 255 atcatacctcaccggcgaattccccggcgactacgggtgggacaccgccgggctctccgc 314 Query: 348 tgaccccgagacc 360 |||||||||||| Sbjct: 315 cgaccccgagacc 327
>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein (CAB) mRNA, partial cds Length = 720 Score = 119 bits (60), Expect = 6e-24 Identities = 159/192 (82%) Strand = Plus / Plus Query: 168 cggcgagggccgcatcaccatgcgcaagacggcgggcaagcccaaggtggcggcgtccag 227 |||||| || ||| |||| ||||||||||| || |||||||||||| || ||||| | Sbjct: 119 cggcgacggacgcttcacgatgcgcaagacagccggcaagcccaagacggtctcgtccgg 178 Query: 228 cagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgacccccc 287 |||||||||||||||| |||| || || |||||||||||| ||||||| || | || Sbjct: 179 cagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgaggcacc 238 Query: 288 gagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgc 347 ||||||||||| |||||||||||||||||||||||||||||||| ||||| || || Sbjct: 239 atcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggctctcagc 298 Query: 348 tgaccccgagac 359 ||||||||||| Sbjct: 299 ggaccccgagac 310
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 ||||||||||| |||||||| | || || ||||||||||||||||| ||||| |||| Sbjct: 154 tccagcagcccatggtacggagctgatcgtgtgctctacctcggcccactctctcgcgag 213 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 ||||| |||||||||||||| || |||||||| |||||||| |||||||| || || || Sbjct: 214 cccccaagctacctcaccggtgatttccccggtgactacgggtgggacacggctggactc 273 Query: 343 tccgctgaccccgagacc 360 || ||||||||||||||| Sbjct: 274 tctgctgaccccgagacc 291
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcg 336 ||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 183 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 242 Query: 337 gggctgtccgctgaccccgagacc 360 || |||||||||||||| |||||| Sbjct: 243 ggtctgtccgctgacccggagacc 266
>emb|AJ000765.1|CRAJ765 Chlamydomonas reinhardtii mRNA for calreticulin Length = 2336 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcg 336 ||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 239 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 180 Query: 337 gggctgtccgctgaccccgagacc 360 || |||||||||||||| |||||| Sbjct: 179 ggcctgtccgctgacccggagacc 156
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcg 336 ||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 181 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 240 Query: 337 gggctgtccgctgaccccgagacc 360 || |||||||||||||| |||||| Sbjct: 241 ggtctgtccgctgacccggagacc 264
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcg 336 ||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 167 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 226 Query: 337 gggctgtccgctgaccccgagacc 360 || |||||||||||||| |||||| Sbjct: 227 ggtctgtccgctgacccggagacc 250
>gb|DQ355993.1| Brassica napus chlorophyll a/b binding protein (LHB1B2) mRNA, partial cds Length = 226 Score = 109 bits (55), Expect = 6e-21 Identities = 79/87 (90%) Strand = Plus / Plus Query: 274 tccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggacacc 333 ||||| || |||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1 tccggagagcccccgagctacctcaccggagagttccccggagactacggatgggacacc 60 Query: 334 gcggggctgtccgctgaccccgagacc 360 || || || |||||||||||||||||| Sbjct: 61 gccggtctctccgctgaccccgagacc 87
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 107 bits (54), Expect = 2e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 259 tacctcggcccgctctccggcgaccccccgagctacctcaccggcgagttccccggcgac 318 ||||||||||| |||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 80 tacctcggccccttctccggcgaggccccctcatacctcaccggcgagttcgccggcgac 139 Query: 319 tacggctgggacaccgcggggctgtccgctgaccccgagacc 360 ||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 140 tacggctgggacaccgccgggctctccgccgaccccgagacc 181
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 107 bits (54), Expect = 2e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccccc 286 ||||||| |||||||| | ||||| ||||||||||||||||| |||||||| || || | Sbjct: 149 gcagcccatggtacggtgctgaccgtgtgctctacctcggcccactctccggtgagcctc 208 Query: 287 cgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccg 346 |||||||||| ||||| |||||||| |||||||| || |||||||| || || || || | Sbjct: 209 cgagctacctgaccggtgagttccctggcgactatgggtgggacactgctggactttcgg 268 Query: 347 ctgaccccgagacc 360 ||||||| |||||| Sbjct: 269 ctgacccggagacc 282
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 107 bits (54), Expect = 2e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgaccccc 286 ||||||| |||||||| |||||||||| ||||| |||||| |||||||||| | | Sbjct: 534 gcagcccctggtacgggcccgaccgcgtcaagtacctaggcccgttctccggcgaggcgc 593 Query: 287 cgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccg 346 || |||||| |||||||||||| ||||||||||||||||||||||||| ||||| || | Sbjct: 594 cgtcctacctgaccggcgagttcgccggcgactacggctgggacaccgccgggctctcgg 653 Query: 347 ctgaccccgagacc 360 | |||||||||||| Sbjct: 654 ccgaccccgagacc 667
>gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 (LHCP) mRNA, partial cds Length = 712 Score = 103 bits (52), Expect = 4e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 163 tacctcaccggtgagttccccggcgactacggctgggacaccgccgggctctccgcggac 222 Query: 352 cccgagac 359 |||||||| Sbjct: 223 cccgagac 230
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 221 cgtccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcg 280 ||||| ||||||||||||||||| |||| || || |||||||||||| ||||||| | Sbjct: 7 cgtccggcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtg 66 Query: 281 accccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggc 340 | | || ||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 67 aggcaccatcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggc 126 Query: 341 tgtccgctgaccccgagac 359 | || || ||||||||||| Sbjct: 127 tctcagcggaccccgagac 145
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 99.6 bits (50), Expect = 6e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||||||||||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 203 ctacctgaccggcgagttccccggtgactacggctgggacactgctggtctgtccgctga 262 Query: 351 ccccgagacc 360 |||||||||| Sbjct: 263 ccccgagacc 272
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 99.6 bits (50), Expect = 6e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 ||||||||| |||||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 1146 ctacctcactggcgagttccccggtgactacggctgggacaccgccggcctgtccgccga 1205 Query: 351 ccccgagacc 360 |||||||||| Sbjct: 1206 ccccgagacc 1215
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 3065 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 3006 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 3005 ccgctggtctatccgccgacccagagacc 2977
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.2 mRNA, complete cds Length = 3338 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 3104 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 3045 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 3044 ccgctggtctatccgccgacccagagacc 3016
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2) transcript variant AT2G34420.1 mRNA, complete cds Length = 1354 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 294 ccgctggtctatccgccgacccagagacc 322
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant AT2G34420.2 mRNA, complete cds Length = 1312 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 294 ccgctggtctatccgccgacccagagacc 322
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 829 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 239 ccgctggtctatccgccgacccagagacc 267
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 1015 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 294 ccgctggtctatccgccgacccagagacc 322
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 97.6 bits (49), Expect = 2e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 205 tacctgactggcgagttccccggcgactacggctgggacaccgccggcctgtccgctgac 264 Query: 352 cccgagacc 360 || |||||| Sbjct: 265 ccggagacc 273
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 93822 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 93763 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 93762 ccgctggtctatccgccgacccagagacc 93734 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 95486 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 95545 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 95546 ctgccggtctatccgccgatcccgagacc 95574
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 80380 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 80439 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 80440 ccgctggtctatccgccgacccagagacc 80468 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 78716 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 78657 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 78656 ctgccggtctatccgccgatcccgagacc 78628
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 883 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 239 ccgctggtctatccgccgacccagagacc 267
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 239 ccgctggtctatccgccgacccagagacc 267
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 239 ccgctggtctatccgccgacccagagacc 267
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || ||||| ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 224 tctccggagagcccccaagctacctcacaggagagttccccggtgactacggatgggaca 283 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || |||||||||||||||||| Sbjct: 284 ccgccggtctttccgctgaccccgagacc 312
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420; T31E10.24) mRNA, complete cds Length = 969 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 290 ccgctggtctatccgccgacccagagacc 318
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 290 ccgctggtctatccgccgacccagagacc 318
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 290 ccgctggtctatccgccgacccagagacc 318
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 1024 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 290 ccgctggtctatccgccgacccagagacc 318
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 995 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 290 ccgctggtctatccgccgacccagagacc 318
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 290 ccgctggtctatccgccgacccagagacc 318
>emb|BX814757.1|CNS0AEAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 409 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 239 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 180 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 179 ccgctggtctatccgccgacccagagacc 151
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 903 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 211 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 270 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 271 ccgctggtctatccgccgacccagagacc 299
>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 273 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 274 ccgctggtctatccgccgacccagagacc 302
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 705 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 646 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 645 ccgctggtctatccgccgacccagagacc 617
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||| ||||||||||||||||||||| || |||||||| ||||||| Sbjct: 234 tctccggcgagcccccgtcctacctcaccggcgagttcccaggtgactacggttgggaca 293 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || ||||| ||||||||||| |||||| Sbjct: 294 ctgctgggctttccgctgacccagagacc 322
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding protein Length = 1405 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 479 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 538 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || ||||| ||||| |||||| Sbjct: 539 ccgctggtctatccgccgacccagagacc 567
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 97.6 bits (49), Expect = 2e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 980 tacctgactggcgagttccccggcgactacggctgggacaccgccggcctgtccgctgac 1039 Query: 352 cccgagacc 360 || |||||| Sbjct: 1040 ccggagacc 1048
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 95.6 bits (48), Expect = 9e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| || |||||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 13 tctccggcgagccaccgagctacctcacaggagagttccccggagactacggatgggaca 72 Query: 332 ccgcggggctgtccgctgaccccgagac 359 | || || || ||||||||||||||||| Sbjct: 73 cagctggcctatccgctgaccccgagac 100
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 93.7 bits (47), Expect = 4e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgag 357 ||||||||||||||||| |||||||||||||| ||||| || |||||||||||||||||| Sbjct: 399 accggcgagttccccggtgactacggctgggataccgctggcctgtccgctgaccccgag 458 Query: 358 acc 360 ||| Sbjct: 459 acc 461
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || |||||||||||||||||||||||||||||| |||| || ||||| ||||| Sbjct: 246 ctacctgactggcgagttccccggcgactacggctgggactccgccggtctgtcggctga 305 Query: 351 ccccgagacc 360 |||||||||| Sbjct: 306 ccccgagacc 315
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||||||||||||||| |||||||||||||||||||| || ||||| ||||| Sbjct: 189 ctacctgaccggcgagttccccggtgactacggctgggacaccgccggcctgtcggctga 248 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 249 cccggagacc 258
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 959 Score = 91.7 bits (46), Expect = 1e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 221 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 280 Query: 332 ccgcggggctgtccgctgaccc 353 |||| || || ||||| ||||| Sbjct: 281 ccgctggtctatccgccgaccc 302
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 91.7 bits (46), Expect = 1e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 273 Query: 332 ccgcggggctgtccgctgaccc 353 |||| || || ||||| ||||| Sbjct: 274 ccgctggtctatccgccgaccc 295
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || ||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 177 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 236 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 237 cccggagacc 246
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || ||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 193 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 252 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 253 cccggagacc 262
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || ||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 223 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 282 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 283 cccggagacc 292
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || ||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 641 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 700 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 701 cccggagacc 710
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || ||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 851 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 910 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 911 cccggagacc 920
>emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 89.7 bits (45), Expect = 6e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 209 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 268 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| | || ||||| ||||| |||||| Sbjct: 269 ccgcttgtctatccgccgacccagagacc 297
>emb|X69434.1|CSCAB1 C.stellata cab1 mRNA for chlorophyll a/b binding protein Length = 1067 Score = 89.7 bits (45), Expect = 6e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 300 cggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 ||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 187 cggcgagttccccggtgactacggctgggacaccgccggcctgtccgccgaccccgagac 246 Query: 360 c 360 | Sbjct: 247 c 247
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds Length = 1044 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 325 gctgaccccgagac 338
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At1g29930) mRNA, complete cds Length = 835 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 199 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 258 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 259 gctgaccccgagac 272
>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At1g29930) mRNA, complete cds Length = 1014 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 325 gctgaccccgagac 338
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 196 ctacctgactggcgagttccccggcgactacggctgggacactgccggtctgtcggctga 255 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 256 cccggagacc 265
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 83.8 bits (42), Expect = 4e-13 Identities = 114/138 (82%) Strand = Plus / Plus Query: 223 tccagcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccggcgac 282 ||||||||||||||||||||| | |||||||| ||| | || || ||||||| || Sbjct: 25 tccagcagcccgtggtacggccctgaccgcgttaagtacttggggccattctccggtgag 84 Query: 283 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctg 342 ||||||||||| | ||||| ||||||||||| ||||||||||||||||| || || || Sbjct: 85 tccccgagctacttgaccggtgagttccccggtgactacggctgggacactgctggactc 144 Query: 343 tccgctgaccccgagacc 360 || |||||||| |||||| Sbjct: 145 tcagctgacccagagacc 162
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1019 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 325 gctgaccccgagac 338
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1045 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 325 gctgaccccgagac 338
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 999 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 325 gctgaccccgagac 338
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 234 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 293 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 294 gctgaccccgagac 307
>emb|BX817619.1|CNS0AAVV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 249 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 308 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 309 gctgaccccgagac 322
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 145 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 204 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 205 gctgaccccgagac 218
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 16716 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 16657 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 16656 gctgaccccgagac 16643 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 21937 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 21996 Query: 346 gctgaccccgagac 359 ||||| |||||||| Sbjct: 21997 gctgatcccgagac 22010 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 19294 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 19353 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 19354 gaccccgagac 19364
>emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein Length = 1109 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 416 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 475 Query: 346 gctgaccccgagac 359 |||||||||||||| Sbjct: 476 gctgaccccgagac 489
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| || |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 201 ctacctgactggcgagttccccggcgactacggctgggacactgccggtctgtcggctga 260 Query: 351 ccccgagacc 360 ||| |||||| Sbjct: 261 cccggagacc 270
>gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence Length = 775 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| || ||||||||||| ||||| ||||||||||| ||||| || ||||||| Sbjct: 13 tctccggcgagccaccgagctaccttaccggagagttccccggtgactatggatgggaca 72 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 |||| || || |||||||| || |||||| Sbjct: 73 ccgccggtctatccgctgatccagagacc 101
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 |||||||| |||||||||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct: 202 tacctcactggcgagttccccggtgactacggctgggataccgccggtctgtctgctgac 261 Query: 352 cccgagacc 360 ||| ||||| Sbjct: 262 ccccagacc 270
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| ||||| |||||||| || || ||||||||||| ||||| || ||||||| Sbjct: 1757 tctccggcgagcccccaagctaccttactggagagttccccggagactatggatgggaca 1816 Query: 332 ccgcggggctgtccgctgaccccgagac 359 |||| || || || |||||||||||||| Sbjct: 1817 ccgctggtctatcagctgaccccgagac 1844
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 79.8 bits (40), Expect = 6e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 305 agttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagacc 360 ||||||||||||||||||||||||||||||| || ||||| |||||||| |||||| Sbjct: 205 agttccccggcgactacggctgggacaccgccggtctgtcggctgacccggagacc 260
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| ||||| |||||||| || || ||||||||||| ||||| || ||||||| Sbjct: 1758 tctccggcgagcccccaagctaccttactggagagttccccggagactatggatgggaca 1817 Query: 332 ccgcggggctgtccgctgaccccgagac 359 |||| || || || |||||||||||||| Sbjct: 1818 ccgctggtctatcagctgaccccgagac 1845
>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007, complete sequence Length = 92741 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || |||||| |||| | ||||| ||||||||||| |||||||||||||||| Sbjct: 66175 tctccggtgagcccccgtcctacttgaccggtgagttccccggtgactacggctgggaca 66116 Query: 332 ccgcggggctgtccgctgaccccgagac 359 | || ||||| || |||||||||||||| Sbjct: 66115 ctgctgggctttctgctgaccccgagac 66088
>ref|NM_102731.2| Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding AT1G29910 (CAB3) mRNA, complete cds Length = 1020 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 252 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 311 Query: 346 gctgaccccgagac 359 ||||| |||||||| Sbjct: 312 gctgatcccgagac 325
>gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence Length = 762 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 157 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 216 Query: 346 gctgaccccgagac 359 ||||| |||||||| Sbjct: 217 gctgatcccgagac 230
>gb|AY114594.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910) mRNA, complete cds Length = 870 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 199 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 258 Query: 346 gctgaccccgagac 359 ||||| |||||||| Sbjct: 259 gctgatcccgagac 272
>gb|AY065165.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910; F1N18.5) mRNA, complete cds Length = 1019 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 252 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 311 Query: 346 gctgaccccgagac 359 ||||| |||||||| Sbjct: 312 gctgatcccgagac 325
>emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 Score = 75.8 bits (38), Expect = 9e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 300 cggcgagttccccggcgactacggctgggacaccgcggggct 341 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 243 cggcgagttccccggcgactacggctgggacaccgccgggct 284
>emb|X03908.1|ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophyll a/b binding protein Length = 1060 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtcc 345 ||||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || Sbjct: 405 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 464 Query: 346 gctgaccccgagac 359 ||||| |||||||| Sbjct: 465 gctgatcccgagac 478
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 75.8 bits (38), Expect = 9e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||| ||||| |||||| |||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 426 tctctggcgagcccccgtcctacctaaccggtgagttcccaggcgactacggctgggaca 485 Query: 332 ccgcggggctgtccgctgaccc 353 | || ||||| ||||| ||||| Sbjct: 486 ctgctgggctttccgcagaccc 507
>dbj|AU066540.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M26 Length = 476 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacac 332 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 253 tacctgaccggcgagttccccggcgactacggctgggacac 293
>gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1042 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||||||||| || ||||||||||| ||||| |||||||||| |||||||| ||||||| Sbjct: 257 tctccggcgagccaccgagctaccttaccggacagttccccggagactacggatgggaca 316 Query: 332 ccgc 335 |||| Sbjct: 317 ccgc 320
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||| ||||| |||||||||||||||||||| |||||||| || |||||||| || ||| Sbjct: 253 tacctgaccggagagttccccggcgactacggatgggacactgctgggctgtcggcggac 312 Query: 352 cccgagac 359 || ||||| Sbjct: 313 ccagagac 320
>ref|NM_102732.2| Arabidopsis thaliana CAB2; chlorophyll binding AT1G29920 (CAB2) mRNA, complete cds Length = 1176 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 269 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 328 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 329 gaccccgagac 339
>gb|BT000726.1| Arabidopsis thaliana clone RAFL06-67-G16 (R11472) putative photosystem II type I chlorophyll a /b binding protein (At1g29920) mRNA, complete cds Length = 1044 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 255 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 314 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 315 gaccccgagac 325
>gb|AY128345.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein, putative (At1g29920) mRNA, complete cds Length = 994 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 255 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 314 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 315 gaccccgagac 325
>gb|AY081572.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920) mRNA, complete cds Length = 898 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 202 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 261 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 262 gaccccgagac 272
>gb|AY062814.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920; F1N18.4) mRNA, complete cds Length = 1007 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 254 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 313 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 314 gaccccgagac 324
>gb|AY060500.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 804 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 202 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 261 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 262 gaccccgagac 272
>gb|AY054198.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 248 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 307 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 308 gaccccgagac 318
>gb|AY052237.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 254 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 313 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 314 gaccccgagac 324
>emb|BX815776.1|CNS0AE4K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 240 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 299 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 300 gaccccgagac 310
>gb|AY086905.1| Arabidopsis thaliana clone 29298 mRNA, complete sequence Length = 1041 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 269 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 328 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 329 gaccccgagac 339
>emb|X03907.1|ATLHCP1 A.thaliana gene (LHCP AB 165) for chlorophyll a/b binding protein Length = 999 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 289 agctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgct 348 |||||||| ||||| |||||||| || |||||||| |||||||| || || || |||||| Sbjct: 347 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 406 Query: 349 gaccccgagac 359 ||||||||||| Sbjct: 407 gaccccgagac 417
>gb|AY198376.1| Citrus limon chlorophyll a/b-binding protein precursor, gene, partial cds; nuclear gene for chloroplast product Length = 647 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||| ||||| ||||| |||||| | ||||| |||||||| ||||||||||| ||||||| Sbjct: 179 tctctggcgagcccccaagctacttgaccggtgagttccctggcgactacggttgggaca 238 Query: 332 ccgcggggctgtccgctgaccc 353 | || ||||| || |||||||| Sbjct: 239 cagccgggctttcagctgaccc 260
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 295 ctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgacccc 354 ||||||||||| || |||||||||||||| ||||||||||| ||||| || || ||||| Sbjct: 282 ctcaccggcgaatttcccggcgactacgggtgggacaccgccgggctctctgccgaccct 341 Query: 355 gagacc 360 |||||| Sbjct: 342 gagacc 347
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||||||||||||||| |||||||| |||||||| || ||||| ||| || Sbjct: 378 ctacctgaccggcgagttccccggagactacgggtgggacacggccgggctcagcgccga 437 Query: 351 ccccgagacc 360 |||||||||| Sbjct: 438 ccccgagacc 447
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 |||| ||||| |||||| ||||||||| ||||||||||| || |||||||||||||||| Sbjct: 207 tctctggcgagcccccgtcctacctcactggcgagttcccaggtgactacggctgggaca 266 Query: 332 ccgcggggct 341 | || ||||| Sbjct: 267 ctgctgggct 276
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1) mRNA, complete cds Length = 1008 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 304 ctgccggtctatccgccgatcccgagacc 332
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 242 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 294
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 318
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 318
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 268 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 320
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 323
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 323
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 273 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 325
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 306 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 358
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 241 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 242 ctgccggtctatccgccgatcccgagacc 270
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 304 ctgccggtctatccgccgatcccgagacc 332
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 65.9 bits (33), Expect = 8e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 316 gactacggctgggacaccgcggggctgtccgctgaccccgagacc 360 |||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 782 gactacggctgggacaccgccggtctgtccgctgacccggagacc 826 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccgg 314 ||||| |||||||||||||| || |||||||||||||| Sbjct: 490 ggcgagcccccgagctacctgactggcgagttccccgg 527
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 304 ctgccggtctatccgccgatcccgagacc 332
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 304 ctgccggtctatccgccgatcccgagacc 332
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 22434279 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 22434331 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 agcgagcgatggcggccgcggcg 102 ||||||||||||||||||||||| Sbjct: 25864797 agcgagcgatggcggccgcggcg 25864819
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 304 ctgccggtctatccgccgatcccgagacc 332
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 95346 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 95398
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 323
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 323
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 323
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 482 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 541 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 542 ctgccggtctatccgccgatcccgagacc 570
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 242 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 294
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 323
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 318
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 266 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 318
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 323
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 267 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 319
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || || |||||||||||||| || ||||||||||| || ||||| ||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 241 Query: 332 ccgcggggctgtccgctgaccccgagacc 360 | || || || ||||| || ||||||||| Sbjct: 242 ctgccggtctatccgccgatcccgagacc 270
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 273 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 325
>gb|AF022738.1|AF022738 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1105 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 247 ggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggaccc 299
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||| || ||||||||||||||||||||||| |||||||| || || || ||||| ||| Sbjct: 938 tacctgacgggcgagttccccggcgactacgggtgggacacggccggcctctccgccgac 997 Query: 352 cccgagacc 360 || |||||| Sbjct: 998 ccggagacc 1006
>dbj|AU066541.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M27 Length = 687 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||| ||||||||||| || |||||||||||||||||||| || || ||||| || ||| Sbjct: 173 tacctgaccggcgagtttccgggcgactacggctgggacactgctggcctgtcggccgac 232 Query: 352 cccgagacc 360 || |||||| Sbjct: 233 ccggagacc 241
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 65.9 bits (33), Expect = 8e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 316 gactacggctgggacaccgcggggctgtccgctgaccccgagacc 360 |||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 695 gactacggctgggacaccgccggtctgtccgctgacccggagacc 739 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 277 ggcgaccccccgagctacctcaccggcgagttccccgg 314 ||||| |||||||||||||| || |||||||||||||| Sbjct: 403 ggcgagcccccgagctacctgactggcgagttccccgg 440
>ref|XM_483142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 350 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 401 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 398 ccggtgagttccccggctactacggctg 425
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 24462467 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 24462518 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 24462515 ccggtgagttccccggctactacggctg 24462542
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 37953 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37906 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ccggcgagttccccggcgactacggctgggacaccgc 335 |||| |||||||||||| |||||||||| || ||||| Sbjct: 37909 ccggtgagttccccggctactacggctgagataccgc 37873
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 78183 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 78234 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 78231 ccggtgagttccccggctactacggctg 78258
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgc 335 ||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 232 tacctgaccggcgagttccccggcgactacgggtgggagaccgc 275
>ref|NM_190738.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccg 277 ||||||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 483 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccg 529
>emb|BX841915.1|CNS09Y31 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 907 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 286 ccgagctacctcaccggcgagttccccggcgactacggctgggacac 332 ||||||||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 677 ccgagctaccttaccggagagttccccggagactacggatgggacac 631
>gb|AF133340.1|AF133340 Phalaenopsis sp. 'KCbutterfly' putative chlorophyll a/b-binding protein mRNA, complete cds Length = 1118 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 ||||||||| |||||||||||||| || |||||||||||||| Sbjct: 290 ctacctcactggcgagttccccggtgattacggctgggacac 331 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 169 ggcgagggccgcatcaccatgc 190 |||||||||||||||||||||| Sbjct: 144 ggcgagggccgcatcaccatgc 165
>gb|DQ275468.1| Arachis hypogaea clone PNDI 2 unknown mRNA Length = 454 Score = 60.0 bits (30), Expect = 5e-06 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || |||||| ||||||||| || |||||||| || ||||||| |||||||| Sbjct: 272 tctccggtgagcccccgtcctacctcactggtgagttcccaggtgactacg-ctgggaca 330 Query: 332 ccgcggggctgtccgctgaccc 353 | || ||||| ||||||||||| Sbjct: 331 ctgctgggctttccgctgaccc 352
>emb|X14341.1|SOCABP S.oleracea chloroplast mRNA for chlorophyll a/b binding protein Length = 980 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||||||||| |||||||| || |||||||| |||||||| || ||||| || |||||| Sbjct: 257 tacctcaccggtgagttccctggtgactacggttgggacactgctgggctttcagctgac 316 Query: 352 cc 353 || Sbjct: 317 cc 318
>ref|NM_126540.2| Arabidopsis thaliana LHCB2.1; chlorophyll binding AT2G05100 (LHCB2.1) mRNA, complete cds Length = 1068 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 262 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 321 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 322 cccggagac 330
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgc 335 |||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct: 4429 ctacctgaccggtgagctgcccggcgactacggctgggacaccgc 4473 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 310 cccggcgactacggctgggacaccgc 335 |||||||||||||||||||||||||| Sbjct: 5744 cccggcgactacggctgggacaccgc 5769 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacac 332 |||||| ||||| ||| | ||||||||||||||||||||||| Sbjct: 986 ctacctgaccggtgagctgcccggcgactacggctgggacac 1027
>gb|AY045787.1| Arabidopsis thaliana At2g05100 mRNA sequence Length = 1047 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 347 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 406 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 407 cccggagac 415
>gb|AC007443.5| Arabidopsis thaliana chromosome 2 clone F15L11 map ve013, complete sequence Length = 13145 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 5600 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 5541 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 5540 cccggagac 5532
>gb|AY052348.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 1001 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 260 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 319 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 320 cccggagac 328
>gb|AY052275.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 943 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 255 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 314 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 315 cccggagac 323
>emb|BX819843.1|CNS0A9GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 980 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 240 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 299 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 300 cccggagac 308
>emb|BX819702.1|CNS0A9H1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZH11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 223 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 282 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 283 cccggagac 291
>emb|BX821844.1|CNS0A936 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 859 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 238 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 297 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 298 cccggagac 306
>emb|BX821132.1|CNS0A9BI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 941 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 238 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 297 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 298 cccggagac 306
>emb|BX819861.1|CNS0A9DS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZD09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 964 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 252 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 311 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 312 cccggagac 320
>emb|BX819688.1|CNS0A9G4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 914 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 221 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 280 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 281 cccggagac 289
>emb|BX819687.1|CNS0A9G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 917 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 223 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 282 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 283 cccggagac 291
>emb|BX819683.1|CNS0A80L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 223 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 282 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 283 cccggagac 291
>emb|BX842010.1|CNS09YA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 934 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 243 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 302 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 303 cccggagac 311
>gb|AF134124.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.3) mRNA, complete cds Length = 967 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 250 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 309 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 310 cccggagac 318
>gb|AF134122.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.1) mRNA, complete cds Length = 974 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 259 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 318 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 319 cccggagac 327
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtc 344 ||||| ||||| || |||||||| |||||||| |||||||| ||||||||||| Sbjct: 296 tacctgaccggtgaattccccggtgactacgggtgggacacggcggggctgtc 348
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 ||||||||||| |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 271 ggcgagttcccgggcgactatgggtgggacacggcggggctctccgcggaccc 323
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 311 ccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 ||||||||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 1 ccggcgactacgggtgggacacggcggggctgtcggcggacccggagac 49
>gb|BT001933.1| Arabidopsis thaliana clone C105385 putative chlorophyll a/b binding protein (At2g05100) mRNA, complete cds Length = 829 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || | |||||| |||||||||||||||||||| || || || ||||| Sbjct: 201 ctacctaaccggagaataccccggagactacggctgggacaccgctggactctcggctga 260 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 261 cccggagac 269
>gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 291 ctacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctga 350 |||||| ||||| || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 219 ctaccttaccggtgaatttcccggtgactacggctgggacactgctgggctttcggctga 278 Query: 351 ccccgagac 359 ||| ||||| Sbjct: 279 ccctgagac 287
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 62463 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 62510 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 62507 ccggtgagttccccggctactacggctg 62534
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 298 accggtgagttccccggtgactacgggtgggacacggcggggct 341
>gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacacggcggggct 271
>gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacacggcggggct 271
>gb|AY617084.1| Pinus contorta chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacacggcggggct 271
>gb|AY617083.1| Pinus radiata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacacggcggggct 271
>gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacacggcggggct 271
>gb|AY617081.1| Pinus echinata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 762 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 228 accggtgagttccccggtgactacgggtgggacacggcggggct 271
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 274 accggtgagttccccggtgactacgggtgggacacggcggggct 317
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 231 cccgtggtacggctccgaccgcgtgctctacctcggcccgctctccgg 278 ||||| ||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 17802509 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 17802556 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gctagctagctagcacgcag 81 |||||||||||||||||||| Sbjct: 24615004 gctagctagctagcacgcag 24615023 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ccggcgagttccccggcgactacggctg 326 |||| |||||||||||| |||||||||| Sbjct: 17802553 ccggtgagttccccggctactacggctg 17802580
>emb|X61608.1|BNLHCB3A B.napus gene for LHCII Type III chlorophyll a/b-binding protein, partial Length = 2036 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgc 335 ||||||||||| ||||| ||||||||||| || ||||||||||| Sbjct: 1568 tacctcaccggagagtttcccggcgactatggttgggacaccgc 1611
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 1376 accggtgagttccccggtgactacgggtgggacacggcggggct 1419
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 298 accggcgagttccccggcgactacggctgggacaccgcggggct 341 ||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 283 accggtgagttccccggtgactacgggtgggacacggcggggct 326
>gb|M23532.1|PCPCBP P.patens major chlorophyll binding protein gene, complete cds Length = 2544 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 301 ggcgagttccccggcgactacggctgggacaccgcggggctgtc 344 ||||||||| ||||||||||||| ||||||||||| || ||||| Sbjct: 1856 ggcgagttcgccggcgactacggatgggacaccgctggactgtc 1899
>ref|NM_126537.2| Arabidopsis thaliana LHCB2.2; chlorophyll binding AT2G05070 (LHCB2.2) mRNA, complete cds Length = 1060 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 279 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 329
>ref|NM_001036246.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G05060 transcript variant AT2G05060.2 mRNA, complete cds Length = 2130 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 1861 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 1811
>gb|AY093372.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070) mRNA, complete cds Length = 881 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 219 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 269
>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence, complete sequence Length = 103889 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 81584 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 81534
>gb|AY066036.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 798 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 219 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 269
>gb|AY062563.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070; F1O13.20) mRNA, complete cds Length = 958 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 279 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 329
>gb|AY054218.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 929 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 277 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 327
>emb|BX819347.1|CNS0A9RX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 260 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 310
>emb|BX819270.1|CNS0A9RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 937 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 250 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 300
>emb|BX820206.1|CNS0A9D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 906 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 268 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 318
>emb|BX820202.1|CNS0A9FS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 262 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 312
>emb|BX819668.1|CNS0A9CZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 267 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 317
>emb|BX819509.1|CNS0A82Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 926 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 255 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 305
>gb|AF134123.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.2) mRNA, complete cds Length = 943 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 309 ccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 269 ccccggagactacggctgggacaccgctggactctcggctgacccggagac 319
>emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding protein type I Length = 684 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 310 cccggcgactacggctgggacaccgcggggctgtccgctgaccccgagacc 360 ||||| |||||||| ||||||||||| ||||| || || |||||||||||| Sbjct: 12 cccggagactacgggtgggacaccgccgggctctcggccgaccccgagacc 62
>gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding protein precursor, mRNA, complete cds Length = 927 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Plus Query: 272 tctccggcgaccccccgagctacctcaccggcgagttccccggcgactacggctgggaca 331 ||||||| || ||||| |||||| | ||||| || |||||||| ||||| |||||||||| Sbjct: 191 tctccggtgagcccccaagctacttgaccggtgaattccccggtgactatggctgggaca 250 Query: 332 ccgcggggctgtccgctgaccc 353 | || || || || |||||||| Sbjct: 251 ctgccggactctcagctgaccc 272
>emb|X76632.1|PPCAB P.patens (Hedw.) B.S.G. partial mRNA for chlorophyll-a, b-binding protein Length = 116 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 311 ccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 ||||||||||||| ||||||||||| || |||||| | ||||| ||||| Sbjct: 5 ccggcgactacggatgggacaccgctggactgtcctcagacccggagac 53
>emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1078 Score = 50.1 bits (25), Expect = 0.005 Identities = 46/53 (86%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtc 344 ||||| ||||| || ||||| || |||||||| |||||||| ||||||||||| Sbjct: 242 tacctaaccggtgaattcccgggtgactacgggtgggacacggcggggctgtc 294
>gb|AY845253.1| Pisum sativum light-harvesting chlorophyll-a/b binding protein Lhcb1 mRNA, complete cds Length = 801 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 ||||||||||| |||||||| |||||||| || || || || |||||||| ||||| Sbjct: 217 gagttccccggtgactacggttgggacactgccggactctctgctgacccagagac 272
>gb|DQ226734.1| Boechera divaricarpa isolate SLW-A-E08 mRNA sequence Length = 399 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Minus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgc 335 ||||||||||| || || ||||||||||| || ||||||||||| Sbjct: 367 tacctcaccggagaatttcccggcgactatggttgggacaccgc 324
>gb|AY219853.1| Nicotiana tabacum chlorophyll a/b binding protein mRNA, complete cds Length = 946 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 ||||||||||| |||||||| || ||||| || |||||||| || || || || |||||| Sbjct: 261 tacctcaccggtgagttcccaggtgactatggttgggacactgctggactctcagctgac 320 Query: 352 cccgagac 359 || ||||| Sbjct: 321 ccagagac 328
>emb|X56538.1|PSCABIIC P.sativum Cab-8 gene for photosystemm II chlorophyll a/b binding protein Length = 2236 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 ||||||||||| |||||||| |||||||| || || || || |||||||| ||||| Sbjct: 1533 gagttccccggtgactacggttgggacactgccggactctctgctgacccagagac 1588
>gb|AF003129.1|AF003129 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1011 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgcggggctgtccgctgac 351 |||||||| || || ||||| || ||||| || |||||||| || ||||| || |||||| Sbjct: 264 tacctcactggtgaattccctggtgactatggttgggacactgctgggctctcagctgac 323 Query: 352 cccgagac 359 |||||||| Sbjct: 324 cccgagac 331
>gb|M64619.1|PEACAB66 Pea cab gene, complete cds Length = 1666 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 ||||||||||| |||||||| |||||||| || || || || |||||||| ||||| Sbjct: 935 gagttccccggtgactacggttgggacactgccggactctctgctgacccagagac 990
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 316 gactacggctgggacaccgcggggctgtccgctgaccccgagac 359 |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 299 gactacgggtgggacacggcggggctgtcggcggacccggagac 342
>gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major light-harvesting chlorophyll a/b-binding protein (polypeptide 15) complex precursor, complete coding sequence Length = 1993 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccccgagac 359 ||||||||||| |||||||| |||||||| || || || || |||||||| ||||| Sbjct: 1236 gagttccccggtgactacggttgggacactgccggactctctgctgacccagagac 1291
>dbj|D14002.1|LAUCAB Lettuce mRNA for light-harvesting chlorophyll a/b-binding protein (LHCP), complete cds Length = 905 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 292 tacctcaccggcgagttccccggcgactacggctgggacaccgc 335 ||||| ||||| || ||||| || |||||||||||||||||||| Sbjct: 249 tacctgaccggtgaattcccaggtgactacggctgggacaccgc 292
>ref|NM_197383.1| Oryza sativa (japonica cultivar-group) putaive mitochondrial inner membrane protein (OSJNBb0018B10.5), mRNA Length = 588 Score = 46.1 bits (23), Expect = 0.078 Identities = 29/31 (93%) Strand = Plus / Minus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 414 cgcggcgaccatggcgctctccatcccggcg 384
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 46.1 bits (23), Expect = 0.078 Identities = 29/31 (93%) Strand = Plus / Plus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 34037 cgcggcgaccatggcgctctccatcccggcg 34067
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.078 Identities = 29/31 (93%) Strand = Plus / Plus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 19576846 cgcggcgaccatggcgctctccatcccggcg 19576876 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgt 254 |||||||||||||||| |||||||||| Sbjct: 18136656 gcagcccgtggtacggacccgaccgcgt 18136683
>dbj|AK107812.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-F03, full insert sequence Length = 944 Score = 46.1 bits (23), Expect = 0.078 Identities = 29/31 (93%) Strand = Plus / Minus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 519 cgcggcgaccatggcgctctccatcccggcg 489
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 agcgagcgatggcggccgcggcg 102 ||||||||||||||||||||||| Sbjct: 35245 agcgagcgatggcggccgcggcg 35267
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.078 Identities = 29/31 (93%) Strand = Plus / Plus Query: 96 cgcggcgaccatggcgctctcctccccggcg 126 |||||||||||||||||||||| ||||||| Sbjct: 19588122 cgcggcgaccatggcgctctccatcccggcg 19588152 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 gcagcccgtggtacggctccgaccgcgt 254 |||||||||||||||| |||||||||| Sbjct: 18145909 gcagcccgtggtacggacccgaccgcgt 18145936
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 44.1 bits (22), Expect = 0.31 Identities = 43/50 (86%) Strand = Plus / Minus Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 |||||||||||| |||||||||| || ||||| | ||| ||||| ||||| Sbjct: 94124 gagttccccggctactacggctgagataccgccgagctctccgccgaccc 94075
>ref|XM_609577.2| PREDICTED: Bos taurus similar to matrix metalloproteinase 25 preproprotein (LOC531092), mRNA Length = 2217 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 catggcgctctcctccccggcg 126 |||||||||||||||||||||| Sbjct: 504 catggcgctctcctccccggcg 483
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.31 Identities = 43/50 (86%) Strand = Plus / Minus Query: 304 gagttccccggcgactacggctgggacaccgcggggctgtccgctgaccc 353 |||||||||||| |||||||||| || ||||| | ||| ||||| ||||| Sbjct: 18189139 gagttccccggctactacggctgagataccgccgagctctccgccgaccc 18189090 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 cttcggcgagggccgcatcaccat 188 ||||||||||| |||||||||||| Sbjct: 3503743 cttcggcgaggcccgcatcaccat 3503766
>emb|X61915.1|PTCABP P.thunbergii cab gene Length = 5419 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 295 ctcaccggcgagttccccggcgactacggctgggacac 332 |||||||| || || |||||||||||||| |||||||| Sbjct: 2476 ctcaccggagaatttcccggcgactacgggtgggacac 2513
>gb|BC029947.1| Homo sapiens, clone IMAGE:5196281, mRNA Length = 114 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 103 accatggcgctctcctccccggcgat 128 |||||||||||||||||||| ||||| Sbjct: 46 accatggcgctctcctcccccgcgat 71 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,130,475 Number of Sequences: 3902068 Number of extensions: 2130475 Number of successful extensions: 51309 Number of sequences better than 10.0: 317 Number of HSP's better than 10.0 without gapping: 323 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 48705 Number of HSP's gapped (non-prelim): 2585 length of query: 360 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 338 effective length of database: 17,147,199,772 effective search space: 5795753522936 effective search space used: 5795753522936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
