ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet25f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular car... 32 0.87
2AFR_ARATH (Q8LAW2) Protein AFR (Protein ATTENUATED FAR-RED RESPO... 31 1.5
3KLD7B_HUMAN (Q96G42) Kelch domain-containing protein 7B 29 5.7
4DACT1_MOUSE (Q8R4A3) Dapper homolog 1 (MDpr1) (Frodo) (Thymus-ex... 28 7.4
5SYT8_HUMAN (Q8NBV8) Synaptotagmin-8 (Synaptotagmin VIII) (SytVIII) 28 7.4

>DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel|
           gene 3 protein)
          Length = 836

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 152 DPCGTRARQSTATSSGIPGMRSTWSASHPWT--RLFGFIIA 36
           D CG     +  T S +P   S WSASHP +  ++ G+I++
Sbjct: 304 DICGGSELDAVKTDSSLPSPSSLWSASHPSSSKKMDGYILS 344



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>AFR_ARATH (Q8LAW2) Protein AFR (Protein ATTENUATED FAR-RED RESPONSE)|
          Length = 372

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 91  LIPGMPDDVAVDCLARVPHGSYRSMRRVCRGW 186
           LI G+P+D+A  CL R+P+  +   R V   W
Sbjct: 28  LISGLPNDIAELCLLRLPYPYHALYRSVSSSW 59



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>KLD7B_HUMAN (Q96G42) Kelch domain-containing protein 7B|
          Length = 495

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +1

Query: 322 GVAV--YNVTTGEWHRESSAP-PVPMFAQCAAVGTRL 423
           G AV  YN  TG W R +S P P P    C  +G  +
Sbjct: 406 GAAVMRYNTVTGSWSRAASLPLPAPAPLHCTTLGNTI 442



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>DACT1_MOUSE (Q8R4A3) Dapper homolog 1 (MDpr1) (Frodo) (Thymus-expressed novel|
           gene 3 protein)
          Length = 778

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 152 DPCGTRARQSTATSSGIPGMRSTWSASHPWT--RLFGFIIA 36
           D C      +T T + +P   S WSASHP +  ++ G+I++
Sbjct: 260 DICIGSELNATKTDNSLPSPSSLWSASHPASSKKMDGYILS 300



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>SYT8_HUMAN (Q8NBV8) Synaptotagmin-8 (Synaptotagmin VIII) (SytVIII)|
          Length = 172

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
 Frame = -1

Query: 119 ATSSGIPGMRSTWSASHPWTR---LFG------FIIACDLCELCCC 9
           A ++ IPG+     A  PW R   + G       +++C LC  CCC
Sbjct: 28  AGTTAIPGLIPDLVAGTPWPRWALIAGALAAGVLLVSCLLCAACCC 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,719,859
Number of Sequences: 219361
Number of extensions: 398440
Number of successful extensions: 1588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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