| Clone Name | baet25b05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ001341.1|HVACYLCOA Hordeum vulgare mRNA for putative acyl-CoA oxidase Length = 2273 Score = 797 bits (402), Expect = 0.0 Identities = 433/438 (98%), Gaps = 4/438 (0%) Strand = Plus / Plus Query: 1 tgtcccgtgctgtttgcattgctgtaaggtatagtgctatccggaagcagtttggttccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 tgtcccgtgctgtttgcattgctgtaaggtatagtgctatccggaagcagtttggttccc 946 Query: 61 aggctggtggccctgagactcaggtcatcaattacaagactcaacagagcaggctcttcc 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 947 aggctggtggccctgagactcaggtcatcaattacaagactcaacagcgcaggctcttcc 1006 Query: 121 ctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaagtggctataca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 ctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaagtggctataca 1066 Query: 181 cggatgtcacacagaagctggaagctaaggattactcaacactgccagaggc-tcatgcc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1067 cggatgtcacacagaagctggaagctaaggattactcaacactgccagaggcttcatgcc 1126 Query: 240 tgtactgctgggctcaagtctgtgacaacatctgccacagctgacgcgattgaagagtgc 299 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1127 tgtactgctgggctcaagtctgtgacaacatctgccaca-ctgacgcgattgaagagtgc 1185 Query: 300 cgaaagctctgcggtggacatggttacctgaacagcagtgggctccctgaactgtttgcg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1186 cgaaagctctgcggtggacatggttacctgaacagcagtgggctccctgaactgtttgcg 1245 Query: 360 gtctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgca 419 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1246 gtctatgttcctgcctgcacctatgaaggag-caatg-cgttttgctgttgcaggttgca 1303 Query: 420 aggtttttgatgaagacc 437 |||||||||||||||||| Sbjct: 1304 aggtttttgatgaagacc 1321
>ref|XM_476282.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 450 bits (227), Expect = e-123 Identities = 374/423 (88%) Strand = Plus / Plus Query: 14 ttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggccc 73 ||||||||||||||| || || ||||| || ||||||||||| | || |||||||||| Sbjct: 915 ttgcattgctgtaagatacagcgctattcgaaagcagtttggccctcaaactggtggccc 974 Query: 74 tgagactcaggtcatcaattacaagactcaacagagcaggctcttccctttgctggcttc 133 ||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 975 tgagactcaggtcctcaattacaagactcagcaaagcagactctttcctttgctggcttc 1034 Query: 134 agcttatgcatacagatttgtgggccagtggctgaagtggctatacacggatgtcacaca 193 ||||||||||| || |||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 1035 agcttatgcatttaggtttgtgggtgagtggctgaagtggctgtacacggatgtcacaca 1094 Query: 194 gaagctggaagctaaggattactcaacactgccagaggctcatgcctgtactgctgggct 253 || |||||||| ||||||| ||||||||| | |||||| |||||||||||||||||| | Sbjct: 1095 taaactggaagccaaggatttctcaacacttcaagaggcccatgcctgtactgctgggtt 1154 Query: 254 caagtctgtgacaacatctgccacagctgacgcgattgaagagtgccgaaagctctgcgg 313 ||| |||||||||||||||| |||||||| | |||||||| |||||||| ||||| || Sbjct: 1155 gaaggctgtgacaacatctgcgacagctgatggaattgaagaatgccgaaaactctgtgg 1214 Query: 314 tggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcctgc 373 |||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||| Sbjct: 1215 tggacatggttacctgaacagcagcgggcttcctgaattgtttgctatctatgttcctgc 1274 Query: 374 ctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaaggtttttgatgaa 433 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| | ||||| Sbjct: 1275 ttgcacttatgaaggagacaatgttgttttgctattgcaggttgcaaggtttctaatgaa 1334 Query: 434 gac 436 ||| Sbjct: 1335 gac 1337
>dbj|AK100758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119B01, full insert sequence Length = 2636 Score = 450 bits (227), Expect = e-123 Identities = 374/423 (88%) Strand = Plus / Plus Query: 14 ttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggccc 73 ||||||||||||||| || || ||||| || ||||||||||| | || |||||||||| Sbjct: 1079 ttgcattgctgtaagatacagcgctattcgaaagcagtttggccctcaaactggtggccc 1138 Query: 74 tgagactcaggtcatcaattacaagactcaacagagcaggctcttccctttgctggcttc 133 ||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 1139 tgagactcaggtcctcaattacaagactcagcaaagcagactctttcctttgctggcttc 1198 Query: 134 agcttatgcatacagatttgtgggccagtggctgaagtggctatacacggatgtcacaca 193 ||||||||||| || |||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 1199 agcttatgcatttaggtttgtgggtgagtggctgaagtggctgtacacggatgtcacaca 1258 Query: 194 gaagctggaagctaaggattactcaacactgccagaggctcatgcctgtactgctgggct 253 || |||||||| ||||||| ||||||||| | |||||| |||||||||||||||||| | Sbjct: 1259 taaactggaagccaaggatttctcaacacttcaagaggcccatgcctgtactgctgggtt 1318 Query: 254 caagtctgtgacaacatctgccacagctgacgcgattgaagagtgccgaaagctctgcgg 313 ||| |||||||||||||||| |||||||| | |||||||| |||||||| ||||| || Sbjct: 1319 gaaggctgtgacaacatctgcgacagctgatggaattgaagaatgccgaaaactctgtgg 1378 Query: 314 tggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcctgc 373 |||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||| Sbjct: 1379 tggacatggttacctgaacagcagcgggcttcctgaattgtttgctatctatgttcctgc 1438 Query: 374 ctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaaggtttttgatgaa 433 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| | ||||| Sbjct: 1439 ttgcacttatgaaggagacaatgttgttttgctattgcaggttgcaaggtttctaatgaa 1498 Query: 434 gac 436 ||| Sbjct: 1499 gac 1501
>dbj|AK098983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M04, full insert sequence Length = 2385 Score = 450 bits (227), Expect = e-123 Identities = 374/423 (88%) Strand = Plus / Plus Query: 14 ttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggccc 73 ||||||||||||||| || || ||||| || ||||||||||| | || |||||||||| Sbjct: 1022 ttgcattgctgtaagatacagcgctattcgaaagcagtttggccctcaaactggtggccc 1081 Query: 74 tgagactcaggtcatcaattacaagactcaacagagcaggctcttccctttgctggcttc 133 ||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 1082 tgagactcaggtcctcaattacaagactcagcaaagcagactctttcctttgctggcttc 1141 Query: 134 agcttatgcatacagatttgtgggccagtggctgaagtggctatacacggatgtcacaca 193 ||||||||||| || |||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 1142 agcttatgcatttaggtttgtgggtgagtggctgaagtggctgtacacggatgtcacaca 1201 Query: 194 gaagctggaagctaaggattactcaacactgccagaggctcatgcctgtactgctgggct 253 || |||||||| ||||||| ||||||||| | |||||| |||||||||||||||||| | Sbjct: 1202 taaactggaagccaaggatttctcaacacttcaagaggcccatgcctgtactgctgggtt 1261 Query: 254 caagtctgtgacaacatctgccacagctgacgcgattgaagagtgccgaaagctctgcgg 313 ||| |||||||||||||||| |||||||| | |||||||| |||||||| ||||| || Sbjct: 1262 gaaggctgtgacaacatctgcgacagctgatggaattgaagaatgccgaaaactctgtgg 1321 Query: 314 tggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcctgc 373 |||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||| Sbjct: 1322 tggacatggttacctgaacagcagcgggcttcctgaattgtttgctatctatgttcctgc 1381 Query: 374 ctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaaggtttttgatgaa 433 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| | ||||| Sbjct: 1382 ttgcacttatgaaggagacaatgttgttttgctattgcaggttgcaaggtttctaatgaa 1441 Query: 434 gac 436 ||| Sbjct: 1442 gac 1444
>dbj|AK060849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E06, full insert sequence Length = 2445 Score = 434 bits (219), Expect = e-118 Identities = 372/423 (87%) Strand = Plus / Plus Query: 14 ttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggccc 73 ||||||||||||||| || || ||||| || ||||||||||| | || |||||||||| Sbjct: 1082 ttgcattgctgtaagatacagcgctattcgaaagcagtttggccctcaaactggtggccc 1141 Query: 74 tgagactcaggtcatcaattacaagactcaacagagcaggctcttccctttgctggcttc 133 ||||||||||||| |||||||||||||||| || ||||| | ||| |||||||||||||| Sbjct: 1142 tgagactcaggtcctcaattacaagactcagcaaagcagaccctttcctttgctggcttc 1201 Query: 134 agcttatgcatacagatttgtgggccagtggctgaagtggctatacacggatgtcacaca 193 ||||||||||| || |||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 1202 agcttatgcatttaggtttgtgggtgagtggctgaagtggctgtacacggatgtcacaca 1261 Query: 194 gaagctggaagctaaggattactcaacactgccagaggctcatgcctgtactgctgggct 253 || |||||||| ||||||| ||||||||| | |||||| |||||||||||||||||| | Sbjct: 1262 taaactggaagccaaggatttctcaacacttcaagaggcccatgcctgtactgctgggtt 1321 Query: 254 caagtctgtgacaacatctgccacagctgacgcgattgaagagtgccgaaagctctgcgg 313 ||| |||||||||||||||| |||||||| | |||||||| |||||||| ||||| || Sbjct: 1322 gaaggctgtgacaacatctgcgacagctgatggaattgaagaatgccgaaaactctgtgg 1381 Query: 314 tggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcctgc 373 |||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||| Sbjct: 1382 tggacatggttacctgaacagcagcgggcttcctgaattgtttgctatctatgttcctgc 1441 Query: 374 ctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaaggtttttgatgaa 433 ||||| ||||||||||||||||| ||||| || |||||||||||||||||| | ||||| Sbjct: 1442 ttgcacttatgaaggagacaatgttgttttactattgcaggttgcaaggtttctaatgaa 1501 Query: 434 gac 436 ||| Sbjct: 1502 gac 1504
>gb|AY104290.1| Zea mays PCO085555 mRNA sequence Length = 2558 Score = 422 bits (213), Expect = e-115 Identities = 381/437 (87%) Strand = Plus / Plus Query: 1 tgtcccgtgctgtttgcattgctgtaaggtatagtgctatccggaagcagtttggttccc 60 |||||||||||||||||||||||||| | || || || ||||| ||||||||||| || | Sbjct: 1060 tgtcccgtgctgtttgcattgctgtacgatacagcgccatccgaaagcagtttggctctc 1119 Query: 61 aggctggtggccctgagactcaggtcatcaattacaagactcaacagagcaggctcttcc 120 | | |||||||||||||||| ||||| | |||||||||||||||| ||||| ||||| | Sbjct: 1120 aagatggtggccctgagactaaggtccttgattacaagactcaacaaagcagactctttc 1179 Query: 121 ctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaagtggctataca 180 | |||||||||||||| ||||||| ||||||||||| | ||||||||||||||||||| Sbjct: 1180 cgttgctggcttcagcatatgcatttagatttgtgggtgactggctgaagtggctataca 1239 Query: 181 cggatgtcacacagaagctggaagctaaggattactcaacactgccagaggctcatgcct 240 ||||||||| ||||| ||||||||||| || ||||||||||||| ||| || ||||||| Sbjct: 1240 tggatgtcactcagaaactggaagctaaagactactcaacactgcaagaagcccatgcct 1299 Query: 241 gtactgctgggctcaagtctgtgacaacatctgccacagctgacgcgattgaagagtgcc 300 |||||||||| | ||| |||||||||||||||| |||||||| || |||||||| || Sbjct: 1300 gtactgctggtttgaaggctgtgacaacatctgcaacagctgatgccattgaagaatgta 1359 Query: 301 gaaagctctgcggtggacatggttacctgaacagcagtgggctccctgaactgtttgcgg 360 |||||||||| || ||||||||||||||||||||||||||||| |||||| ||||||| | Sbjct: 1360 gaaagctctgtggcggacatggttacctgaacagcagtgggcttcctgaattgtttgctg 1419 Query: 361 tctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaa 420 ||||||||||||| ||||| ||||||||||||||| | ||| |||| ||||||||||||| Sbjct: 1420 tctatgttcctgcttgcacttatgaaggagacaatattgttctgcttttgcaggttgcaa 1479 Query: 421 ggtttttgatgaagacc 437 || || | ||||||||| Sbjct: 1480 ggattctaatgaagacc 1496
>gb|BT009170.1| Triticum aestivum clone wl1n.pk0102.e8:fis, full insert mRNA sequence Length = 2379 Score = 414 bits (209), Expect = e-112 Identities = 380/437 (86%) Strand = Plus / Plus Query: 1 tgtcccgtgctgtttgcattgctgtaaggtatagtgctatccggaagcagtttggttccc 60 |||||||||||||||||||||||||| | || || || ||||| ||||||||||| || | Sbjct: 994 tgtcccgtgctgtttgcattgctgtacgatacagcgccatccgaaagcagtttggctctc 1053 Query: 61 aggctggtggccctgagactcaggtcatcaattacaagactcaacagagcaggctcttcc 120 | | |||||| ||||||||| ||||| | |||||||||||||||| ||||| ||||| | Sbjct: 1054 aagatggtggacctgagactaaggtccttgattacaagactcaacaaagcagactctttc 1113 Query: 121 ctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaagtggctataca 180 | |||||||||||||| ||||||| ||||||||||| | ||||||||||||||||||| Sbjct: 1114 cgttgctggcttcagcatatgcatttagatttgtgggtgactggctgaagtggctataca 1173 Query: 181 cggatgtcacacagaagctggaagctaaggattactcaacactgccagaggctcatgcct 240 ||||||||| ||||| ||||||||||| || ||||||||||||| ||| || ||||||| Sbjct: 1174 tggatgtcactcagaaactggaagctaaagactactcaacactgcaagaagcccatgcct 1233 Query: 241 gtactgctgggctcaagtctgtgacaacatctgccacagctgacgcgattgaagagtgcc 300 |||||||||| | ||| |||||||||||||||| |||||||| || |||||||| || Sbjct: 1234 gtactgctggtttgaaggctgtgacaacatctgcaacagctgatgccattgaagaatgta 1293 Query: 301 gaaagctctgcggtggacatggttacctgaacagcagtgggctccctgaactgtttgcgg 360 |||||||||| || ||||||||||||||||||||||||||||| |||||| ||||||| | Sbjct: 1294 gaaagctctgtggcggacatggttacctgaacagcagtgggcttcctgaattgtttgctg 1353 Query: 361 tctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaa 420 ||||||||||||| ||||| ||||||||||||||| | ||| |||| ||||||||||||| Sbjct: 1354 tctatgttcctgcttgcacttatgaaggagacaatattgttctgcttttgcaggttgcaa 1413 Query: 421 ggtttttgatgaagacc 437 || || | ||||||||| Sbjct: 1414 ggattctaatgaagacc 1430
>gb|AY105897.1| Zea mays PCO085554 mRNA sequence Length = 2366 Score = 353 bits (178), Expect = 3e-94 Identities = 361/422 (85%) Strand = Plus / Plus Query: 1 tgtcccgtgctgtttgcattgctgtaaggtatagtgctatccggaagcagtttggttccc 60 |||||||||||||||||||||||||| | || || || || | ||||||||||| || | Sbjct: 992 tgtcccgtgctgtttgcattgctgtacgatacagcgcagtcagaaagcagtttggctctc 1051 Query: 61 aggctggtggccctgagactcaggtcatcaattacaagactcaacagagcaggctcttcc 120 | | |||||||||||||||||||||| | ||||||||||||||||||||||| ||||| | Sbjct: 1052 aagatggtggccctgagactcaggtccttaattacaagactcaacagagcagactctttc 1111 Query: 121 ctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaagtggctataca 180 | |||||||||||||| ||||||| ||||||||||| | ||||| || |||||||| | Sbjct: 1112 cattgctggcttcagcatatgcatttagatttgtgggtgattggctcaactggctatata 1171 Query: 181 cggatgtcacacagaagctggaagctaaggattactcaacactgccagaggctcatgcct 240 ||||||| || ||||| |||||||| ||||| | ||| || |||| || |||||||| | Sbjct: 1172 cggatgtaactcagaaactggaagccaaggacttctcgaccctgcaggaagctcatgcat 1231 Query: 241 gtactgctgggctcaagtctgtgacaacatctgccacagctgacgcgattgaagagtgcc 300 | |||||||| | || ||||||||||||| | |||||||| || |||||||| |||| Sbjct: 1232 gcactgctggtttgaaagctgtgacaacatcagtaacagctgatgcaattgaagaatgcc 1291 Query: 301 gaaagctctgcggtggacatggttacctgaacagcagtgggctccctgaactgtttgcgg 360 |||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 1292 gaaagctctgtggtggacatggttacttgaacagcagtgggcttcctgagttgtttgcgg 1351 Query: 361 tctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaa 420 |||||||||| || ||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 1352 tctatgttcccgcttgcacttacgaaggagacaacgtcgttttgcttttgcaggttgcaa 1411 Query: 421 gg 422 || Sbjct: 1412 gg 1413
>emb|X84055.1|HVCDR29 H.vulgare cdr29 gene Length = 1180 Score = 293 bits (148), Expect = 2e-76 Identities = 154/156 (98%) Strand = Plus / Plus Query: 282 gacgcgattgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtggg 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 gacgcgattgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtggg 137 Query: 342 ctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaatgtcgtt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaatgtcgtt 197 Query: 402 ttgctgttgcaggttgcaaggtttttgatgaagacc 437 ||| ||||||| |||||||||||||||||||||||| Sbjct: 198 ttgatgttgcatgttgcaaggtttttgatgaagacc 233
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 226 bits (114), Expect = 5e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 81 caggtcatcaattacaagactcaacagagcaggctcttccctttgctggcttcagcttat 140 |||||| |||||||||||||||| || ||||| ||||| ||||||||||||||||||||| Sbjct: 229453 caggtcctcaattacaagactcagcaaagcagactctttcctttgctggcttcagcttat 229512 Query: 141 gcatacagatttgtgggccagtggctgaagtggctatacacggatgtcacacagaagctg 200 |||| || |||||||| |||||||||||||||| ||||||||||||||||| || ||| Sbjct: 229513 gcatttaggtttgtgggtgagtggctgaagtggctgtacacggatgtcacacataaactg 229572 Query: 201 gaagctaaggattactcaacactgccagaggctcatgcctgtactgctgggctcaagtct 260 ||||| ||||||| ||||||||| | |||||| |||||||||||||||||| | ||| || Sbjct: 229573 gaagccaaggatttctcaacacttcaagaggcccatgcctgtactgctgggttgaaggct 229632 Query: 261 gtgacaacatctgccacagctg 282 |||||||||||||| ||||||| Sbjct: 229633 gtgacaacatctgcgacagctg 229654 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Plus Query: 288 attgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtgggctccct 347 |||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 229893 attgaagaatgccgaaaactctgtggtggacatggttacctgaacagcagcgggcttcct 229952 Query: 348 gaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctg 407 ||| ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 229953 gaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttgcta 230012 Query: 408 ttgcaggtt 416 ||||||||| Sbjct: 230013 ttgcaggtt 230021 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 14 ttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggccc 73 ||||||||||||||| || || ||||| || ||||||||||| | || |||||||||| Sbjct: 229166 ttgcattgctgtaagatacagcgctattcgaaagcagtttggccctcaaactggtggccc 229225 Query: 74 tgagactcaggt 85 |||||||||||| Sbjct: 229226 tgagactcaggt 229237 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 409 tgcaggttgcaaggtttttgatgaagac 436 ||||||||||||||||| | |||||||| Sbjct: 230177 tgcaggttgcaaggtttctaatgaagac 230204
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 226 bits (114), Expect = 5e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 81 caggtcatcaattacaagactcaacagagcaggctcttccctttgctggcttcagcttat 140 |||||| |||||||||||||||| || ||||| ||||| ||||||||||||||||||||| Sbjct: 94349 caggtcctcaattacaagactcagcaaagcagactctttcctttgctggcttcagcttat 94408 Query: 141 gcatacagatttgtgggccagtggctgaagtggctatacacggatgtcacacagaagctg 200 |||| || |||||||| |||||||||||||||| ||||||||||||||||| || ||| Sbjct: 94409 gcatttaggtttgtgggtgagtggctgaagtggctgtacacggatgtcacacataaactg 94468 Query: 201 gaagctaaggattactcaacactgccagaggctcatgcctgtactgctgggctcaagtct 260 ||||| ||||||| ||||||||| | |||||| |||||||||||||||||| | ||| || Sbjct: 94469 gaagccaaggatttctcaacacttcaagaggcccatgcctgtactgctgggttgaaggct 94528 Query: 261 gtgacaacatctgccacagctg 282 |||||||||||||| ||||||| Sbjct: 94529 gtgacaacatctgcgacagctg 94550 Score = 161 bits (81), Expect = 2e-36 Identities = 117/129 (90%) Strand = Plus / Plus Query: 288 attgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtgggctccct 347 |||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 94789 attgaagaatgccgaaaactctgtggtggacatggttacctgaacagcagcgggcttcct 94848 Query: 348 gaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctg 407 ||| ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 94849 gaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttgcta 94908 Query: 408 ttgcaggtt 416 ||||||||| Sbjct: 94909 ttgcaggtt 94917 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 14 ttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggccc 73 ||||||||||||||| || || ||||| || ||||||||||| | || |||||||||| Sbjct: 94062 ttgcattgctgtaagatacagcgctattcgaaagcagtttggccctcaaactggtggccc 94121 Query: 74 tgagactcaggt 85 |||||||||||| Sbjct: 94122 tgagactcaggt 94133 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 409 tgcaggttgcaaggtttttgatgaagac 436 ||||||||||||||||| | |||||||| Sbjct: 95073 tgcaggttgcaaggtttctaatgaagac 95100
>gb|AF404403.1|AF404403 Glycine max acyl-CoA oxidase (ACX1;1) mRNA, complete cds Length = 2263 Score = 119 bits (60), Expect = 8e-24 Identities = 249/312 (79%) Strand = Plus / Plus Query: 111 aggctcttccctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaag 170 ||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||| Sbjct: 1136 aggctcttccctttgctggcttctgcttatgctttcagatttgtgggtgggtggctgaaa 1195 Query: 171 tggctatacacggatgtcacacagaagctggaagctaaggattactcaacactgccagag 230 ||||| || | |||||| || | | || ||||||| |||| |||||| |||| ||| Sbjct: 1196 tggctttatatggatgtgacggaaagattgcaagctaatgatttttcaacattgcctgag 1255 Query: 231 gctcatgcctgtactgctgggctcaagtctgtgacaacatctgccacagctgacgcgatt 290 |||||||| || |||||||| | || || |||| || | || || ||||| | ||| Sbjct: 1256 gctcatgcatgcactgctggattgaaatccttgactactacagcaactgctgatggaatt 1315 Query: 291 gaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtgggctccctgaa 350 ||||| ||||| || || || ||||| ||||||||||| |||||||| |||||||| Sbjct: 1316 gaagaatgccgtaaactatgtggtggtcatggttacctttgtagcagtggtctccctgag 1375 Query: 351 ctgtttgcggtctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctgttg 410 | ||||| || ||||||||||||||||| ||||||||||||||||| || | ||||| Sbjct: 1376 ttatttgctgtttatgttcctgcctgcacgtatgaaggagacaatgttgtgcttctgtta 1435 Query: 411 caggttgcaagg 422 ||||| |||||| Sbjct: 1436 caggtggcaagg 1447
>dbj|AK104349.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F12, full insert sequence Length = 1045 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 361 tctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaa 420 ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 6 tctatgttcctgcttgcacttatgaaggagacaatgttgttttgctattgcaggttgcaa 65 Query: 421 ggtttttgatgaagac 436 ||||| | |||||||| Sbjct: 66 ggtttctaatgaagac 81
>dbj|AK059993.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D08, full insert sequence Length = 1045 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 361 tctatgttcctgcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaa 420 ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 6 tctatgttcctgcttgcacttatgaaggagacaatgttgttttgctattgcaggttgcaa 65 Query: 421 ggtttttgatgaagac 436 ||||| | |||||||| Sbjct: 66 ggtttctaatgaagac 81
>ref|NM_129124.3| Arabidopsis thaliana ACX5 (ACYL-COA OXIDASE 5); acyl-CoA oxidase/ oxidoreductase AT2G35690 (ACX5) mRNA, complete cds Length = 2377 Score = 97.6 bits (49), Expect = 3e-17 Identities = 331/425 (77%) Strand = Plus / Plus Query: 12 gtttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggc 71 |||||||||||| ||||| |||||| | || | ||||||||| || || | ||||||| Sbjct: 1106 gtttgcattgctactaggtacagtgctgttcgaaggcagtttggctcacatgatggtggc 1165 Query: 72 cctgagactcaggtcatcaattacaagactcaacagagcaggctcttccctttgctggct 131 |||||| ||||| || ||||| || ||||| |||| |||| | || ||| ||||||| Sbjct: 1166 attgagacacaggtgattaattataaaactcagcagaacaggttgtttcctctgctggca 1225 Query: 132 tcagcttatgcatacagatttgtgggccagtggctgaagtggctatacacggatgtcaca 191 || || ||||||| | ||||| || | |||||||||||||| ||||| ||||| ||| Sbjct: 1226 tctgcatatgcatttcggtttgtaggggaatggctgaagtggctctacactgatgtaaca 1285 Query: 192 cagaagctggaagctaaggattactcaacactgccagaggctcatgcctgtactgctggg 251 | | || || || | |||| | ||||| |||| || |||||||| || |||||||| Sbjct: 1286 aaaagactagaggccagtgatttcgcaacattgcctgaagctcatgcatgcactgctgga 1345 Query: 252 ctcaagtctgtgacaacatctgccacagctgacgcgattgaagagtgccgaaagctctgc 311 | |||||| |||| || || ||||| |||| | ||||||||| || || ||| | || Sbjct: 1346 ttgaagtctatgactacctcagccacctctgatgggattgaagaatgtcgtaagttatgt 1405 Query: 312 ggtggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcct 371 ||||||||||| ||| || | |||||||| |||||| ||||||| || ||||||||| Sbjct: 1406 ggtggacatggatacttgtggtgtagtgggcttcctgaattgtttgctgtatatgttcct 1465 Query: 372 gcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaaggtttttgatg 431 || ||||| || || ||||||||||| || |||| ||| |||||||| || ||| ||||| Sbjct: 1466 gcttgcacatacgagggagacaatgttgtgttgcagttacaggttgctagatttctgatg 1525 Query: 432 aagac 436 ||||| Sbjct: 1526 aagac 1530
>gb|AY096691.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA, complete cds Length = 2026 Score = 97.6 bits (49), Expect = 3e-17 Identities = 331/425 (77%) Strand = Plus / Plus Query: 12 gtttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggc 71 |||||||||||| ||||| |||||| | || | ||||||||| || || | ||||||| Sbjct: 898 gtttgcattgctactaggtacagtgctgttcgaaggcagtttggctcacatgatggtggc 957 Query: 72 cctgagactcaggtcatcaattacaagactcaacagagcaggctcttccctttgctggct 131 |||||| ||||| || ||||| || ||||| |||| |||| | || ||| ||||||| Sbjct: 958 attgagacacaggtgattaattataaaactcagcagaacaggttgtttcctctgctggca 1017 Query: 132 tcagcttatgcatacagatttgtgggccagtggctgaagtggctatacacggatgtcaca 191 || || ||||||| | ||||| || | |||||||||||||| ||||| ||||| ||| Sbjct: 1018 tctgcatatgcatttcggtttgtaggggaatggctgaagtggctctacactgatgtaaca 1077 Query: 192 cagaagctggaagctaaggattactcaacactgccagaggctcatgcctgtactgctggg 251 | | || || || | |||| | ||||| |||| || |||||||| || |||||||| Sbjct: 1078 aaaagactagaggccagtgatttcgcaacattgcctgaagctcatgcatgcactgctgga 1137 Query: 252 ctcaagtctgtgacaacatctgccacagctgacgcgattgaagagtgccgaaagctctgc 311 | |||||| |||| || || ||||| |||| | ||||||||| || || ||| | || Sbjct: 1138 ttgaagtctatgactacctcagccacctctgatgggattgaagaatgtcgtaagttatgt 1197 Query: 312 ggtggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcct 371 ||||||||||| ||| || | |||||||| |||||| ||||||| || ||||||||| Sbjct: 1198 ggtggacatggatacttgtggtgtagtgggcttcctgaattgtttgctgtatatgttcct 1257 Query: 372 gcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaaggtttttgatg 431 || ||||| || || ||||||||||| || |||| ||| |||||||| || ||| ||||| Sbjct: 1258 gcttgcacatacgagggagacaatgttgtgttgcagttacaggttgctagatttctgatg 1317 Query: 432 aagac 436 ||||| Sbjct: 1318 aagac 1322
>gb|AY074357.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA, complete cds Length = 2393 Score = 97.6 bits (49), Expect = 3e-17 Identities = 331/425 (77%) Strand = Plus / Plus Query: 12 gtttgcattgctgtaaggtatagtgctatccggaagcagtttggttcccaggctggtggc 71 |||||||||||| ||||| |||||| | || | ||||||||| || || | ||||||| Sbjct: 1106 gtttgcattgctactaggtacagtgctgttcgaaggcagtttggctcacatgatggtggc 1165 Query: 72 cctgagactcaggtcatcaattacaagactcaacagagcaggctcttccctttgctggct 131 |||||| ||||| || ||||| || ||||| |||| |||| | || ||| ||||||| Sbjct: 1166 attgagacacaggtgattaattataaaactcagcagaacaggttgtttcctctgctggca 1225 Query: 132 tcagcttatgcatacagatttgtgggccagtggctgaagtggctatacacggatgtcaca 191 || || ||||||| | ||||| || | |||||||||||||| ||||| ||||| ||| Sbjct: 1226 tctgcatatgcatttcggtttgtaggggaatggctgaagtggctctacactgatgtaaca 1285 Query: 192 cagaagctggaagctaaggattactcaacactgccagaggctcatgcctgtactgctggg 251 | | || || || | |||| | ||||| |||| || |||||||| || |||||||| Sbjct: 1286 aaaagactagaggccagtgatttcgcaacattgcctgaagctcatgcatgcactgctgga 1345 Query: 252 ctcaagtctgtgacaacatctgccacagctgacgcgattgaagagtgccgaaagctctgc 311 | |||||| |||| || || ||||| |||| | ||||||||| || || ||| | || Sbjct: 1346 ttgaagtctatgactacctcagccacctctgatgggattgaagaatgtcgtaagttatgt 1405 Query: 312 ggtggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcct 371 ||||||||||| ||| || | |||||||| |||||| ||||||| || ||||||||| Sbjct: 1406 ggtggacatggatacttgtggtgtagtgggcttcctgaattgtttgctgtatatgttcct 1465 Query: 372 gcctgcacctatgaaggagacaatgtcgttttgctgttgcaggttgcaaggtttttgatg 431 || ||||| || || ||||||||||| || |||| ||| |||||||| || ||| ||||| Sbjct: 1466 gcttgcacatacgagggagacaatgttgtgttgcagttacaggttgctagatttctgatg 1525 Query: 432 aagac 436 ||||| Sbjct: 1526 aagac 1530
>gb|AY817109.1| Lycopersicon esculentum peroxisomal acyl-CoA oxidase 1A (Acx1A) mRNA, complete cds; nuclear gene for peroxisomal protein Length = 2248 Score = 97.6 bits (49), Expect = 3e-17 Identities = 271/345 (78%) Strand = Plus / Plus Query: 93 tacaagactcaacagagcaggctcttccctttgctggcttcagcttatgcatacagattt 152 ||||| ||||| || | |||||||||||| ||| ||||||| || ||||| | ||||||| Sbjct: 1086 tacaaaactcagcaaaacaggctcttccccttgttggcttctgcatatgccttcagattt 1145 Query: 153 gtgggccagtggctgaagtggctatacacggatgtcacacagaagctggaagctaaggat 212 || || |||||||||| ||| | ||||| ||||| || || | || | ||| || ||| Sbjct: 1146 gttggtgagtggctgaaatggttgtacactgatgttacccaaagacttgcagcaaatgat 1205 Query: 213 tactcaacactgccagaggctcatgcctgtactgctgggctcaagtctgtgacaacatct 272 | ||||||| |||| ||||| ||||| ||||| || || | |||||| |||| || | Sbjct: 1206 ttctcaacattgcctgaggcacatgcatgtaccgcaggattgaagtctttgaccaccagt 1265 Query: 273 gccacagctgacgcgattgaagagtgccgaaagctctgcggtggacatggttacctgaac 332 ||||| ||||| | |||||||| ||||||||| | ||||| || |||||||| || Sbjct: 1266 gccactgctgatggaattgaagaatgccgaaagttatgcggaggtcatggttatctttgt 1325 Query: 333 agcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagac 392 ||||||||||| || ||| | ||||| || ||||| |||||||| || || |||||||| Sbjct: 1326 agcagtgggcttccagaattatttgccgtttatgtccctgcctgtacttacgaaggagat 1385 Query: 393 aatgtcgttttgctgttgcaggttgcaaggtttttgatgaagacc 437 |||||||| | | | | ||||||||||||||| | ||||||||| Sbjct: 1386 aatgtcgtgctacagctacaggttgcaaggtttcttatgaagacc 1430
>ref|NM_117778.3| Arabidopsis thaliana ACX1 (ACYL-COA OXIDASE 1) AT4G16760 (ACX1) mRNA, complete cds Length = 2456 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||||| Sbjct: 1385 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaca 1444 Query: 394 atgt 397 |||| Sbjct: 1445 atgt 1448
>gb|BT001067.1| Arabidopsis thaliana At4g16760/dl4405c mRNA, complete cds Length = 1995 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||||| Sbjct: 1220 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaca 1279 Query: 394 atgt 397 |||| Sbjct: 1280 atgt 1283
>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6 Length = 213788 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||||| Sbjct: 190939 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaca 190880 Query: 394 atgt 397 |||| Sbjct: 190879 atgt 190876
>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44 Length = 198735 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||||| Sbjct: 168867 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaca 168808 Query: 394 atgt 397 |||| Sbjct: 168807 atgt 168804
>gb|AY058849.1| Arabidopsis thaliana AT4g16760/dl4405c mRNA, complete cds Length = 2341 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||||| Sbjct: 1353 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaca 1412 Query: 394 atgt 397 |||| Sbjct: 1413 atgt 1416
>dbj|AK221943.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-46-G04 Length = 1482 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||||| Sbjct: 487 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaca 546 Query: 394 atgt 397 |||| Sbjct: 547 atgt 550
>gb|AF057044.1|AF057044 Arabidopsis thaliana acyl-CoA oxidase (ACX1) mRNA, complete cds Length = 2300 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||||| Sbjct: 1296 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaca 1355 Query: 394 atgt 397 |||| Sbjct: 1356 atgt 1359
>gb|AC119408.23| Medicago truncatula clone mth2-5f18, complete sequence Length = 120127 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 288 attgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtgggctccct 347 |||||||| ||||| || || || ||||||||||||||||| |||||||| ||||| Sbjct: 6722 attgaagaatgccgcaaactatgtggtggacatggttacctttgtagcagtggtctcccc 6781 Query: 348 gaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaa 394 || | ||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 6782 gagttatttgcagtctatgttcctacctgcacatatgaaggagacaa 6828 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 111 aggctcttccctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaag 170 ||||||||||||||||| || || |||||||| | ||||||||| || ||||| |||| Sbjct: 5833 aggctcttccctttgctagcctctgcttatgctttcagatttgttggggagtggttgaaa 5892 Query: 171 tggctatacacggatgt 187 ||||| ||||||||||| Sbjct: 5893 tggctttacacggatgt 5909
>gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete sequence Length = 121295 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 288 attgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtgggctccct 347 |||||||| ||||| || || || ||||||||||||||||| |||||||| ||||| Sbjct: 93557 attgaagaatgccgcaaactatgtggtggacatggttacctttgtagcagtggtctcccc 93616 Query: 348 gaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaa 394 || | ||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 93617 gagttatttgcagtctatgttcctacctgcacatatgaaggagacaa 93663 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 111 aggctcttccctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaag 170 ||||||||||||||||| || || |||||||| | ||||||||| || ||||| |||| Sbjct: 92668 aggctcttccctttgctagcctctgcttatgctttcagatttgttggggagtggttgaaa 92727 Query: 171 tggctatacacggatgt 187 ||||| ||||||||||| Sbjct: 92728 tggctttacacggatgt 92744
>emb|BX829266.1|CNS0A3HA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 965 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 334 gcagtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagaca 393 ||||||||||||| || |||||||| || ||||||||||||||||| || |||||||| | Sbjct: 45 gcagtgggctccccgagctgtttgctgtatatgttcctgcctgcacatacgaaggagaga 104 Query: 394 atgt 397 |||| Sbjct: 105 atgt 108
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 336 agtgggctccctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaat 395 |||||||| |||||| ||||||| || ||||||||||| ||||| || || ||||||||| Sbjct: 42305 agtgggcttcctgaattgtttgctgtatatgttcctgcttgcacatacgagggagacaat 42246 Query: 396 gtcgttttgctgttgcaggt 415 || || |||| ||| ||||| Sbjct: 42245 gttgtgttgcagttacaggt 42226
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 288 attgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtgggctccct 347 |||||||| ||||| || || || ||||| |||||||| || |||||||| || ||| Sbjct: 15609 attgaagaatgccgtaaactatgtggtggtcatggttatctttgtagcagtggtctacct 15668 Query: 348 gaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaat 395 || | ||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 15669 gagttatttgcagtttatgttcctgcctgcacatatgaaggagacaat 15716 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 114 ctcttccctttgctggcttcagcttatgcatacagatttgtgggccagtggctgaagtgg 173 |||||||| ||||| ||||| || ||||| | ||||||||| | |||||||||| ||| Sbjct: 14806 ctcttcccattgctagcttctgcatatgctttcagatttgttagtgagtggctgaaatgg 14865 Query: 174 ctatacacggatgt 187 || ||||||||||| Sbjct: 14866 ctttacacggatgt 14879
>gb|AY817111.1| Lycopersicon cheesmaniae peroxisomal acyl-CoA oxidase 1A (Acx1A) gene, complete cds Length = 30000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 93 tacaagactcaacagagcaggctcttccctttgctggcttcagcttatgcatacagattt 152 ||||| ||||| || | |||||||||||| ||| ||||||| || ||||| | ||||||| Sbjct: 17789 tacaaaactcagcaaaacaggctcttccccttgttggcttctgcatatgccttcagattt 17848 Query: 153 gtgggccagtggctgaagtggctatacacggatgtcacacagaagctggaagctaaggat 212 || || |||||||||| ||| | ||||| ||||| || || | || | ||| || ||| Sbjct: 17849 gttggtgagtggctgaaatggttgtacactgatgttacccaaagacttgcagcaaatgat 17908 Query: 213 tactcaacactgccagaggctcatgcctgtac 244 | ||||||| |||| ||||| ||||| ||||| Sbjct: 17909 ttctcaacattgcctgaggcacatgcatgtac 17940 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 108 agcaggctcttccctttgctggcttcagcttatgcatacagatttgtgggccagtggctg 167 |||||||||||||| ||| | |||||||| ||||| | ||||||||| || |||||||| Sbjct: 24124 agcaggctcttccccttgttagcttcagcatatgccttcagatttgttggtgagtggctg 24183 Query: 168 aa 169 || Sbjct: 24184 aa 24185 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 288 attgaagagtgccgaaagctctgcggtggacatggttacctgaacagcagtgggctccct 347 |||||||| ||||||||| | || || || |||||||| || ||||||||||| || Sbjct: 18547 attgaagaatgccgaaagttatgtggaggtcatggttatctttgtagcagtgggcttcca 18606 Query: 348 gaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaatgtcgt 400 ||| | ||||| || ||||| |||||||| || || |||||||| |||||||| Sbjct: 18607 gaattatttgccgtttatgtccctgcctgtacttacgaaggagataatgtcgt 18659
>gb|AF404404.1|AF404404 Glycine max acyl-CoA oxidase (ACX1;2) mRNA, complete cds Length = 2254 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 312 ggtggacatggttacctgaacagcagtgggctccctgaactgtttgcggtctatgttcct 371 ||||| ||||||||||| ||||||||| |||||||| | ||||| ||||| ||||| Sbjct: 1319 ggtggccatggttacctttgcagcagtggtctccctgagttatttgcagtctacattcct 1378 Query: 372 gcctgcacctatgaaggagacaa 394 ||||||| || ||||||||||| Sbjct: 1379 acctgcacatacgaaggagacaa 1401 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 111 aggctcttccctttgctggcttcagcttatgcatacagatttgt 154 ||||||||||||||| | ||||| || ||||| | ||||||||| Sbjct: 1118 aggctcttccctttgttagcttctgcctatgccttcagatttgt 1161
>gb|AY817110.1| Lycopersicon esculentum peroxisomal acyl-CoA oxidase 1B (Acx1B) mRNA, complete cds; nuclear gene for peroxisomal protein Length = 2010 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 108 agcaggctcttccctttgctggcttcagcttatgcatacagatttgtgggccagtggctg 167 |||||||||||||| ||| | |||||||| ||||| | ||||||||| || |||||||| Sbjct: 1027 agcaggctcttccccttgttagcttcagcatatgccttcagatttgttggtgagtggctg 1086 Query: 168 aa 169 || Sbjct: 1087 aa 1088
>gb|AC164096.3| Mus musculus BAC clone RP23-356H17 from chromosome 8, complete sequence Length = 229851 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 agaagctggaagctaaggatt 213 ||||||||||||||||||||| Sbjct: 102885 agaagctggaagctaaggatt 102905
>gb|AC092835.4| Homo sapiens BAC clone RP11-11P22 from 2, complete sequence Length = 158404 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 taaggattactcaacactgcc 226 ||||||||||||||||||||| Sbjct: 45581 taaggattactcaacactgcc 45561
>gb|AC012297.12| Mus musculus chromosome 7, clone RP23-78H9, complete sequence Length = 180139 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 caggctggtggccctgagactcag 83 |||||||||||||||||| ||||| Sbjct: 28039 caggctggtggccctgaggctcag 28062
>gb|AY600371.1| Homo sapiens replication factor C (activator 1) 1, 145kDa (RFC1) gene, complete cds Length = 82933 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gccagaggctcatgcctgta 243 |||||||||||||||||||| Sbjct: 23890 gccagaggctcatgcctgta 23871
>ref|XM_841395.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4540) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atccggaagcagtttggttc 58 |||||||||||||||||||| Sbjct: 102 atccggaagcagtttggttc 121
>ref|XM_841397.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4560) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atccggaagcagtttggttc 58 |||||||||||||||||||| Sbjct: 102 atccggaagcagtttggttc 121
>ref|XM_841399.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4580) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atccggaagcagtttggttc 58 |||||||||||||||||||| Sbjct: 102 atccggaagcagtttggttc 121
>ref|XM_841401.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4600) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atccggaagcagtttggttc 58 |||||||||||||||||||| Sbjct: 102 atccggaagcagtttggttc 121
>ref|XM_841404.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4630) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atccggaagcagtttggttc 58 |||||||||||||||||||| Sbjct: 102 atccggaagcagtttggttc 121
>emb|AL683813.10| Human DNA sequence from clone RP11-1114A5 on chromosome X Contains the 5' end of the ARHGEF6 gene for Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6, a ribosomal protein L7 (RPL7) pseudogene, a RAN member RAS oncogene family pseudogene, a novel gene, the RNMX gene for RNA binding motif protein (X chromosome), the 5' end of a novel gene and two CpG islands, complete sequence Length = 148654 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cagaggctcatgcctgtact 245 |||||||||||||||||||| Sbjct: 61905 cagaggctcatgcctgtact 61924
>emb|AL450484.1| Human DNA sequence from clone RP5-1056D13 on chromosome Xq27.1-28, complete sequence Length = 22253 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aacagagcaggctcttccct 122 |||||||||||||||||||| Sbjct: 6534 aacagagcaggctcttccct 6553
>ref|XM_505667.1| Yarrowia lipolytica CLIB122, YALI0F20526g predicted mRNA Length = 5820 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cagaagctggaagctaagga 211 |||||||||||||||||||| Sbjct: 1744 cagaagctggaagctaagga 1763
>emb|AL021938.1|HS232K4 Human DNA sequence from clone RP1-232K4 on chromosome 6p22.3 Contains the 3'end of the JMJ gene for jumonji protein and 2 CpG islands, complete sequence Length = 198161 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ttgctgttgcaggttgcaag 421 |||||||||||||||||||| Sbjct: 194125 ttgctgttgcaggttgcaag 194106
>gb|AC130893.3| Homo sapiens X BAC RP13-926M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 attactcaacactgccagag 230 |||||||||||||||||||| Sbjct: 100301 attactcaacactgccagag 100320
>gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, complete sequence Length = 133544 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ctggtggccctgagactcag 83 |||||||||||||||||||| Sbjct: 101205 ctggtggccctgagactcag 101186
>gb|AC103967.4| Homo sapiens chromosome 15, clone CTD-3221M10, complete sequence Length = 201545 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctgtttgcattgctgtaagg 29 |||||||||||||||||||| Sbjct: 4733 ctgtttgcattgctgtaagg 4714
>gb|AC016180.14| Homo sapiens chromosome , clone RP11-553E24, complete sequence Length = 184735 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gccagaggctcatgcctgta 243 |||||||||||||||||||| Sbjct: 154745 gccagaggctcatgcctgta 154764
>gb|AC019270.12| Homo sapiens chromosome 8, clone RP11-10C8, complete sequence Length = 154957 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 atacagatttgtgggccagt 162 |||||||||||||||||||| Sbjct: 92448 atacagatttgtgggccagt 92467
>gb|AC023135.6| Homo sapiens BAC clone RP11-488J13 from 4, complete sequence Length = 108885 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gccagaggctcatgcctgta 243 |||||||||||||||||||| Sbjct: 17189 gccagaggctcatgcctgta 17208
>gb|AC013526.7| Homo sapiens, clone RP11-114I24, complete sequence Length = 156895 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctgtttgcattgctgtaagg 29 |||||||||||||||||||| Sbjct: 89570 ctgtttgcattgctgtaagg 89551
>gb|AC022844.8| Homo sapiens chromosome 8, clone RP11-250P18, complete sequence Length = 171732 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 atacagatttgtgggccagt 162 |||||||||||||||||||| Sbjct: 147773 atacagatttgtgggccagt 147754
>gb|AC022692.11| Homo sapiens chromosome 15, clone RP11-530L17, complete sequence Length = 173604 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctgtttgcattgctgtaagg 29 |||||||||||||||||||| Sbjct: 32014 ctgtttgcattgctgtaagg 32033
>gb|AC108439.22| Mus musculus chromosome 8, clone RP23-214F1, complete sequence Length = 205732 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gctggtggccctgagactcaggtc 86 |||||||||||||||||| ||||| Sbjct: 23377 gctggtggccctgagactgaggtc 23354
>gb|AC005015.2|AC005015 Homo sapiens BAC clone GS1-166C5 from 7q11.23-q21.1, complete sequence Length = 219935 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gccagaggctcatgcctgta 243 |||||||||||||||||||| Sbjct: 35926 gccagaggctcatgcctgta 35907
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cagaagctggaagctaagga 211 |||||||||||||||||||| Sbjct: 2731601 cagaagctggaagctaagga 2731620 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,486,337 Number of Sequences: 3902068 Number of extensions: 4486337 Number of successful extensions: 311890 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 311539 Number of HSP's gapped (non-prelim): 329 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)