Clone Name	baet25b04
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for ...	575	e-161
2	dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clon...	339	5e-90
3	dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clon...	339	5e-90
4	dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clon...	331	1e-87
5	gb|AY105650.1| Zea mays PCO135935 mRNA sequence	200	3e-48
6	gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein...	200	3e-48
7	gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein...	200	3e-48
8	gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome...	163	6e-37
9	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	163	6e-37
10	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	163	6e-37
11	gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence	103	5e-19
12	emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP...	76	1e-10
13	emb|X95727.1|BJMCAB1GE B.juncea mRNA for chlorophyll a/b-binding...	58	3e-05
14	gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl...	44	0.39
15	ref|NM_117102.3| Arabidopsis thaliana LHCB5 (LIGHT HARVESTING CO...	42	1.6
16	emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase...	42	1.6
17	gb|AF339718.1| Arabidopsis thaliana putative chlorophyll a/b-bin...	42	1.6
18	gb|AF326900.1| Arabidopsis thaliana putative chlorophyll a/b-bin...	42	1.6
19	gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, c...	42	1.6
20	gb|AF439282.1|AF439282 Retama raetam chl a/b-binding protein mRN...	42	1.6
21	gb|AF424597.1|AF424597 Arabidopsis thaliana AT4g10340/F24G24_140...	42	1.6
22	gb|AY054126.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, c...	42	1.6
23	gb|AF380631.1|AF380631 Arabidopsis thaliana AT4g10340/F24G24_140...	42	1.6
24	emb|BX829238.1|CNS0A4DW Arabidopsis thaliana Full-length cDNA Co...	42	1.6
25	emb|BX826540.1|CNS0A4GD Arabidopsis thaliana Full-length cDNA Co...	42	1.6
26	emb|BX826592.1|CNS0A355 Arabidopsis thaliana Full-length cDNA Co...	42	1.6
27	gb|AY087939.1| Arabidopsis thaliana clone 39765 mRNA, complete s...	42	1.6
28	gb|AF134129.1| Arabidopsis thaliana Lhcb5 protein (Lhcb5) mRNA, ...	42	1.6
29	gb|AY111693.1| Zea mays CL6746_1 mRNA sequence	42	1.6
30	gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete...	40	6.1
31	ref|XM_527798.1| PREDICTED: Pan troglodytes similar to hypotheti...	40	6.1
32	gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, com...	40	6.1
33	ref|XM_368803.1| Magnaporthe grisea 70-15 chromosome VI hypothet...	40	6.1
34	emb|CR931997.1| Corynebacterium jeikeium K411 complete genome	40	6.1
35	gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete...	40	6.1
36	gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, compl...	40	6.1
37	gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ...	40	6.1
38	emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chrom...	40	6.1
39	emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9...	40	6.1
40	gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome	40	6.1
41	emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chr...	40	6.1
42	gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, com...	40	6.1
43	gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, comp...	40	6.1
44	gb|AF159555.1| Eastern equine encephalomyelitis virus isolate TX...	40	6.1
45	dbj|AK047546.1| Mus musculus 10 days neonate cerebellum cDNA, RI...	40	6.1
46	gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, com...	40	6.1
47	gb|AC154749.2| Mus musculus BAC clone RP24-399C21 from 17, compl...	40	6.1

---

>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b
           binding (CAB) protein of photosystem II (PSII)
          Length = 2689

 Score =  575 bits (290), Expect = e-161
 Identities = 293/294 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acccatcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acccatcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttct 750

                                                                       
Query: 61  ccctcccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ccctcccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcac 810

                                                                       
Query: 121 ccggctcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ccggctcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgca 870

                                                                       
Query: 181 gaagatcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gaagatcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgc 930

                                                                 
Query: 241 gcccatggccacctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 294
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gcccgtggccacctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 984



 Score =  170 bits (86), Expect = 3e-39
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                        
Query: 293  ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 352
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 1146

                                      
Query: 353  tacctcaacggcgaggttcccggaga 378
            ||||||||||||||||||||||||||
Sbjct: 1147 tacctcaacggcgaggttcccggaga 1172



 Score =  107 bits (54), Expect = 3e-20
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                  
Query: 379  ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 1435



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 430  gtaccaggcctttgagctcatccatg 455
            ||||||||||||||||||||||||||
Sbjct: 1550 gtaccaggcctttgagctcatccatg 1575

---

>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full
           insert sequence
          Length = 1101

 Score =  339 bits (171), Expect = 5e-90
 Identities = 329/383 (85%), Gaps = 9/383 (2%)
 Strand = Plus / Plus

                                                                       
Query: 73  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 68  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 127

                                                                       
Query: 133 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 128 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 187

                                                                       
Query: 193 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccatggccac 252
           |||||         ||| ||||||||| ||||||||||| ||||||||  || |  || |
Sbjct: 188 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 238

                                                                       
Query: 253 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 312
           ||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||||||| 
Sbjct: 239 ctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatctt 298

                                                                       
Query: 313 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 372
           ||||||  | || ||||| ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 299 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 358

                                                                       
Query: 373 cggagactacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
           |||||||||||||||||| |||||||| ||  |||||||||||||||||||| |||||||
Sbjct: 359 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 418

                                  
Query: 433 ccaggcctttgagctcatccatg 455
           |||||||| |||||| |||||||
Sbjct: 419 ccaggcctatgagctgatccatg 441

---

>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full
           insert sequence
          Length = 1186

 Score =  339 bits (171), Expect = 5e-90
 Identities = 329/383 (85%), Gaps = 9/383 (2%)
 Strand = Plus / Plus

                                                                       
Query: 73  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 79  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 138

                                                                       
Query: 133 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 139 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 198

                                                                       
Query: 193 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccatggccac 252
           |||||         ||| ||||||||| ||||||||||| ||||||||  || |  || |
Sbjct: 199 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 249

                                                                       
Query: 253 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 312
           ||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||||||| 
Sbjct: 250 ctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatctt 309

                                                                       
Query: 313 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 372
           ||||||  | || ||||| ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 310 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 369

                                                                       
Query: 373 cggagactacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
           |||||||||||||||||| |||||||| ||  |||||||||||||||||||| |||||||
Sbjct: 370 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 429

                                  
Query: 433 ccaggcctttgagctcatccatg 455
           |||||||| |||||| |||||||
Sbjct: 430 ccaggcctatgagctgatccatg 452

---

>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full
           insert sequence
          Length = 1157

 Score =  331 bits (167), Expect = 1e-87
 Identities = 328/383 (85%), Gaps = 9/383 (2%)
 Strand = Plus / Plus

                                                                       
Query: 73  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 78  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 137

                                                                       
Query: 133 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 138 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 197

                                                                       
Query: 193 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccatggccac 252
           |||||         ||| ||||||||| ||||||||||| ||||||||  || |  || |
Sbjct: 198 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 248

                                                                       
Query: 253 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 312
           ||||||| ||| ||||| ||| || |||||| ||||||||||||||||||||||||||| 
Sbjct: 249 ctcgagccccgacatcggcgatgagctcgccgagtggtacggccctgacaggaggatctt 308

                                                                       
Query: 313 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 372
           ||||||  | || ||||| ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 309 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 368

                                                                       
Query: 373 cggagactacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
           |||||||||||||||||| |||||||| ||  |||||||||||||||||||| |||||||
Sbjct: 369 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 428

                                  
Query: 433 ccaggcctttgagctcatccatg 455
           |||||||| |||||| |||||||
Sbjct: 429 ccaggcctatgagctgatccatg 451

---

>gb|AY105650.1| Zea mays PCO135935 mRNA sequence
          Length = 1366

 Score =  200 bits (101), Expect = 3e-48
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                       
Query: 271 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 330
           |||||| |||||||||||||| || |||||||||||||||||| ||||  | || ||  |
Sbjct: 352 cgacgagctcgccaagtggtatggtcctgacaggaggatctacctgccggatgggctgtt 411

                                                                       
Query: 331 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 390
            |||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||
Sbjct: 412 ggaccggtcggaggtgccggagtacctcaccggagaggtccctggagactatggctacga 471

                                                                       
Query: 391 tccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcat 450
            |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||
Sbjct: 472 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 531

                
Query: 451 ccatg 455
           |||||
Sbjct: 532 ccatg 536



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 84  caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 143
           |||||||||||||||||||  ||||||| || ||||||| |||| ||||||| |||||||
Sbjct: 174 caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgcgggctcct 233

                                                               
Query: 144 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 195
           || | || ||||| || ||||| || || || || |||||||| ||||||||
Sbjct: 234 cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 285

---

>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA,
           complete cds
          Length = 1073

 Score =  200 bits (101), Expect = 3e-48
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                       
Query: 271 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 330
           |||||| ||||||||||||||||| |||||||||||||||||| ||||  | || ||  |
Sbjct: 208 cgacgagctcgccaagtggtacggtcctgacaggaggatctacctgccggatgggctgtt 267

                                                                       
Query: 331 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 390
            |||||||||||||| ||||||||||||| ||| ||||| || |||||||| ||||||||
Sbjct: 268 ggaccggtcggaggtaccggagtacctcaccggagaggtccctggagactatggctacga 327

                                                                       
Query: 391 tccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcat 450
            |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||
Sbjct: 328 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 387

                
Query: 451 ccatg 455
           |||||
Sbjct: 388 ccatg 392



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 84  caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 143
           |||||||||||||||||||  ||||||| || ||||||| |||| |||||||||||||||
Sbjct: 30  caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgccggctcct 89

                                                               
Query: 144 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 195
           || | || ||||| || ||||| || || || || |||||||| ||||||||
Sbjct: 90  cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 141

---

>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA,
           complete cds
          Length = 957

 Score =  200 bits (101), Expect = 3e-48
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                       
Query: 271 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 330
           |||||| ||||||||||||||||| |||||||||||||||||| ||||  | || ||| |
Sbjct: 210 cgacgagctcgccaagtggtacggtcctgacaggaggatctacctgccggatgggctctt 269

                                                                       
Query: 331 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 390
            ||||| |||||||| ||||||||||||| ||| ||||| || |||||||| ||||||||
Sbjct: 270 ggaccgctcggaggtaccggagtacctcaccggagaggtccctggagactatggctacga 329

                                                                       
Query: 391 tccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcat 450
            |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||
Sbjct: 330 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 389

                
Query: 451 ccatg 455
           |||||
Sbjct: 390 ccatg 394



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 86  atggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcctcc 145
           |||||||| || |||||  ||||||| || ||||||  |||| |||||||||||||||||
Sbjct: 34  atggcggctcttgctccatccaagattctgggcaccaagctcaacttcgccggctcctcc 93

                                                                 
Query: 146 aggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccctcttc 199
            | || ||||| || ||||| || || || || |||||||||||||||||||||
Sbjct: 94  cgctacgccaccgcagcgcccaccgcgggggctcagaagatcgtctccctcttc 147

---

>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0091I11, complete sequence
          Length = 135993

 Score =  163 bits (82), Expect = 6e-37
 Identities = 186/222 (83%), Gaps = 9/222 (4%)
 Strand = Plus / Plus

                                                                         
Query: 73    tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
             ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 38104 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 38163

                                                                         
Query: 133   cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
             ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 38164 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 38223

                                                                         
Query: 193   cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccatggccac 252
             |||||         ||| ||||||||| ||||||||||| ||||||||  || |  || |
Sbjct: 38224 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 38274

                                                       
Query: 253   ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 294
             ||||||| ||| ||||| ||| || |||||||||||||||||
Sbjct: 38275 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 38316



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 293   ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 352
             ||||||||||||||||||| ||||||  | || ||||| ||||| || ||||||||||| 
Sbjct: 38427 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 38486

                                       
Query: 353   tacctcaacggcgaggttcccggaga 378
             ||||||||||| ||||| ||||||||
Sbjct: 38487 tacctcaacggagaggtccccggaga 38512



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 379   ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
             |||||||||||| |||||||| ||  |||||||||||||||||||| |||||||
Sbjct: 39057 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 39110

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  163 bits (82), Expect = 6e-37
 Identities = 186/222 (83%), Gaps = 9/222 (4%)
 Strand = Plus / Plus

                                                                           
Query: 73      tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
               ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 7579018 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 7579077

                                                                           
Query: 133     cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
               ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 7579078 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 7579137

                                                                           
Query: 193     cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccatggccac 252
               |||||         ||| ||||||||| ||||||||||| ||||||||  || |  || |
Sbjct: 7579138 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 7579188

                                                         
Query: 253     ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 294
               ||||||| ||| ||||| ||| || |||||||||||||||||
Sbjct: 7579189 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 7579230



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                           
Query: 293     ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 352
               ||||||||||||||||||| ||||||  | || ||||| ||||| || ||||||||||| 
Sbjct: 7579341 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 7579400

                                         
Query: 353     tacctcaacggcgaggttcccggaga 378
               ||||||||||| ||||| ||||||||
Sbjct: 7579401 tacctcaacggagaggtccccggaga 7579426



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                     
Query: 379     ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
               |||||||||||| |||||||| ||  |||||||||||||||||||| |||||||
Sbjct: 7579971 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 7580024

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  163 bits (82), Expect = 6e-37
 Identities = 186/222 (83%), Gaps = 9/222 (4%)
 Strand = Plus / Plus

                                                                           
Query: 73      tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
               ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 7649105 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 7649164

                                                                           
Query: 133     cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
               ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 7649165 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 7649224

                                                                           
Query: 193     cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccatggccac 252
               |||||         ||| ||||||||| ||||||||||| ||||||||  || |  || |
Sbjct: 7649225 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 7649275

                                                         
Query: 253     ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 294
               ||||||| ||| ||||| ||| || |||||||||||||||||
Sbjct: 7649276 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 7649317



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                           
Query: 293     ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 352
               ||||||||||||||||||| ||||||  | || ||||| ||||| || ||||||||||| 
Sbjct: 7649428 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 7649487

                                         
Query: 353     tacctcaacggcgaggttcccggaga 378
               ||||||||||| ||||| ||||||||
Sbjct: 7649488 tacctcaacggagaggtccccggaga 7649513



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                     
Query: 379     ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
               |||||||||||| |||||||| ||  |||||||||||||||||||| |||||||
Sbjct: 7650058 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 7650111

---

>gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence
          Length = 1196

 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                       
Query: 350 gagtacctcaacggcgaggttcccggagactacggctacgatccttttggtctgggcaag 409
           |||||| | ||||| || ||||||||||||||||| ||||||||||||||| || |||||
Sbjct: 344 gagtacttgaacggagaagttcccggagactacggttacgatccttttggtttgagcaag 403

                                                       
Query: 410 aagccagaggacttcgccaagtaccaggcctttgagctcatcca 453
           |||||||| ||||||||||| || ||||| | |||||| |||||
Sbjct: 404 aagccagaagacttcgccaaatatcaggcatatgagctgatcca 447



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 269 gacgacgaactcgccaagtggtacggccctgacag 303
           ||||| || ||||||||||||||||| ||||||||
Sbjct: 263 gacgatgagctcgccaagtggtacggacctgacag 297

---

>emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide
          Length = 2327

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                  
Query: 379  ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 432
            |||||| ||||||||||||||| || ||||||||||||| ||||||||||||||
Sbjct: 1018 ctacggttacgatccttttggtttgagcaagaagccagaagacttcgccaagta 1071

---

>emb|X95727.1|BJMCAB1GE B.juncea mRNA for chlorophyll a/b-binding protein
          Length = 1033

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 270 acgacgaactcgccaagtggtacggccctgacaggaggatctacttgcc 318
           ||||||| |||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 185 acgacgagctcgccaagtggtatggtcctgacaggagaatcttcttgcc 233

---

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 223     cccgaagccgaagcccgcgccc 244
               ||||||||||||||||||||||
Sbjct: 2412357 cccgaagccgaagcccgcgccc 2412336

---

>ref|NM_117102.3| Arabidopsis thaliana LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM
           II 5); chlorophyll binding AT4G10340 (LHCB5) mRNA,
           complete cds
          Length = 1208

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 359 ctcgccaagtggtatggtcctgacaggag 387

---

>emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase operon
          Length = 11280

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 224  ccgaagccgaagcccgcgccc 244
            |||||||||||||||||||||
Sbjct: 4368 ccgaagccgaagcccgcgccc 4348

---

>gb|AF339718.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein
           (At4g10340) mRNA, complete cds
          Length = 893

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 175 ctcgccaagtggtatggtcctgacaggag 203

---

>gb|AF326900.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein
           (At4g10340) mRNA, complete cds
          Length = 998

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255

---

>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 1950

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 478 ctcgccaagtggtatggtcctgacaggag 450

---

>gb|AF439282.1|AF439282 Retama raetam chl a/b-binding protein mRNA, partial cds
          Length = 318

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 281 gccaagtggtacggccctgacaggaggat 309
           ||||||||||| || ||||||||||||||
Sbjct: 246 gccaagtggtatggtcctgacaggaggat 274

---

>gb|AF424597.1|AF424597 Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 1027

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255

---

>gb|AY054126.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 843

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 175 ctcgccaagtggtatggtcctgacaggag 203

---

>gb|AF380631.1|AF380631 Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 982

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255

---

>emb|BX829238.1|CNS0A4DW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL83ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 996

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 208 ctcgccaagtggtatggtcctgacaggag 236

---

>emb|BX826540.1|CNS0A4GD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB37ZC03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 989

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 207 ctcgccaagtggtatggtcctgacaggag 235

---

>emb|BX826592.1|CNS0A355 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB45ZA02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 972

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 214 ctcgccaagtggtatggtcctgacaggag 242

---

>gb|AY087939.1| Arabidopsis thaliana clone 39765 mRNA, complete sequence
          Length = 1036

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 269 ctcgccaagtggtatggtcctgacaggag 297

---

>gb|AF134129.1| Arabidopsis thaliana Lhcb5 protein (Lhcb5) mRNA, complete cds
          Length = 1029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 278 ctcgccaagtggtacggccctgacaggag 306
           |||||||||||||| || |||||||||||
Sbjct: 222 ctcgccaagtggtatggtcctgacaggag 250

---

>gb|AY111693.1| Zea mays CL6746_1 mRNA sequence
          Length = 1026

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 gcctgccccgaagccgaagcc 237
           |||||||||||||||||||||
Sbjct: 465 gcctgccccgaagccgaagcc 485

---

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cggctcctccaggtatgcca 155
              ||||||||||||||||||||
Sbjct: 333603 cggctcctccaggtatgcca 333622

---

>ref|XM_527798.1| PREDICTED: Pan troglodytes similar to hypothetical protein
           (LOC472424), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  gctgagctgagcacgcccctctgc 46
           ||||||||||||||| ||||||||
Sbjct: 450 gctgagctgagcacgaccctctgc 427

---

>gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, complete sequence
          Length = 164660

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      cccatcacatcctcccttcc 21
              ||||||||||||||||||||
Sbjct: 150209 cccatcacatcctcccttcc 150190

---

>ref|XM_368803.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00441.4) partial mRNA
          Length = 612

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 tggccacctcgagcgccggc 265
           ||||||||||||||||||||
Sbjct: 328 tggccacctcgagcgccggc 309

---

>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 213     agaagcctgccccgaagccg 232
               ||||||||||||||||||||
Sbjct: 1342884 agaagcctgccccgaagccg 1342865

---

>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence
          Length = 150332

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    gctgagctgagcacgcccctctgc 46
             ||||||||||||||| ||||||||
Sbjct: 62037 gctgagctgagcacgaccctctgc 62060

---

>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence
          Length = 178050

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    gctgagctgagcacgcccctctgc 46
             ||||||||||||||| ||||||||
Sbjct: 33553 gctgagctgagcacgaccctctgc 33576

---

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     ccgaagccgaagcccgcgcc 243
               ||||||||||||||||||||
Sbjct: 2226819 ccgaagccgaagcccgcgcc 2226800

---

>emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chromosome 6 Contains the 3'
             end of the gene for phenylalanine-tRNA synthetase (FARS1),
             complete sequence
          Length = 57423

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   acaagaagcctgccccgaag 229
             ||||||||||||||||||||
Sbjct: 38602 acaagaagcctgccccgaag 38583

---

>emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9 on chromosome 1p34.3-36.11
             Contains the gene for a novel protein, a ribosomal protein
             S24 (RPS24) pseudogene, the GPR3 gene for G
             protein-coupled receptor 3 and the 3' end of the WASF2
             gene for WAS protein family, member 2, complete sequence
          Length = 77322

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    ctgctgcacgccccttctcc 62
             ||||||||||||||||||||
Sbjct: 27561 ctgctgcacgccccttctcc 27542

---

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    catcgacgacgaactcgcca 284
              ||||||||||||||||||||
Sbjct: 713736 catcgacgacgaactcgcca 713717

---

>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the
             5' end of the Slc36a3 gene for solute carrier family 36
             (proton/amino acid symporter) member 3, two novel genes,
             the Tramd1 gene for tramdorin 1 (transmembrane domain rich
             protein), the Slc36a1 gene for solute carrier family 36
             (proton/amino acid symporter) member 1 and the gene for
             the ortholog of human and rat FAT tumor suppressor homolog
             2 (Drosophila) FAT2, complete sequence
          Length = 188782

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   accaggcctttgagctcatc 451
             ||||||||||||||||||||
Sbjct: 56511 accaggcctttgagctcatc 56492

---

>gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, complete sequence
          Length = 119922

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 408  agaagccagaggacttcgccaagt 431
            |||||||||| |||||||||||||
Sbjct: 8920 agaagccagacgacttcgccaagt 8943

---

>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence
          Length = 197191

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    ccccttctccctcccaaccttggg 76
             |||||||||| |||||||||||||
Sbjct: 70853 ccccttctccttcccaaccttggg 70830

---

>gb|AF159555.1| Eastern equine encephalomyelitis virus isolate TX95-PV5-2547
           structural polyprotein gene, complete cds
          Length = 4114

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 211 caagaagcctgccccgaagccgaagcccgcgc 242
           |||||||||||| || ||||| ||||||||||
Sbjct: 262 caagaagcctgcgcccaagcctaagcccgcgc 293

---

>dbj|AK047546.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930086K23 product:inferred:
           ORF2 consensus sequence encoding endonuclease and
           reverse transcriptase minus RNaseH {Rattus norvegi, full
           insert sequence
          Length = 3901

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   cccatcacatcctcccttcc 21
           ||||||||||||||||||||
Sbjct: 557 cccatcacatcctcccttcc 576

---

>gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, complete sequence
          Length = 200177

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      cccatcacatcctcccttcc 21
              ||||||||||||||||||||
Sbjct: 178280 cccatcacatcctcccttcc 178299

---

>gb|AC154749.2| Mus musculus BAC clone RP24-399C21 from 17, complete sequence
          Length = 155483

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ctcccttcctgctgagctga 32
              ||||||||||||||||||||
Sbjct: 137483 ctcccttcctgctgagctga 137502


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,075,546
Number of Sequences: 3902068
Number of extensions: 3075546
Number of successful extensions: 65277
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64900
Number of HSP's gapped (non-prelim): 369
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---