ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet25a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZRF1_HUMAN (Q99543) Zuotin-related factor 1 (M-phase phosphoprot... 33 0.31
2DNJC1_MOUSE (Q61712) DnaJ homolog subfamily C member 1 (DnaJ pro... 30 2.7
3DNJC1_HUMAN (Q96KC8) DnaJ homolog subfamily C member 1 30 3.5
4VL96_IRV1 (P22856) L96 protein 29 5.9
5ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 prot... 29 5.9

>ZRF1_HUMAN (Q99543) Zuotin-related factor 1 (M-phase phosphoprotein 11)|
          Length = 568

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 239 WTREQEKAFENALATVEEEEGEAMWDKIADAVEGKS 346
           WT E++K  E AL T      E  W+KIA+AV G++
Sbjct: 501 WTTEEQKLLEQALKTYPVNTPER-WEKIAEAVPGRT 535



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>DNJC1_MOUSE (Q61712) DnaJ homolog subfamily C member 1 (DnaJ protein homolog|
           MTJ1)
          Length = 552

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 239 WTREQEKAFENALATVEEEEGEAMWDKIADAVEGKSPE 352
           WT+ Q+K  E AL    +   +  WDKIA  V  KS E
Sbjct: 495 WTQSQQKLLELALQQYPKGASDR-WDKIAKCVPSKSKE 531



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>DNJC1_HUMAN (Q96KC8) DnaJ homolog subfamily C member 1|
          Length = 554

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 239 WTREQEKAFENALATVEEEEGEAMWDKIADAVEGKSPE 352
           WT+ Q+K  E AL        +  WDKIA  V  KS E
Sbjct: 497 WTQNQQKLLELALQQYPRGSSDR-WDKIARCVPSKSKE 533



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>VL96_IRV1 (P22856) L96 protein|
          Length = 867

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 54  SPPQSVRPTDPCRRPASPAER 116
           +PP SVRP  P  RP SP+ R
Sbjct: 471 TPPSSVRPKSPSVRPKSPSVR 491



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>ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 protein homolog)|
          Length = 867

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +3

Query: 9   PPRTPQRHQI----RLFLISPPQSVRPTDPCRRPASPAER 116
           PPRTPQ  Q+    + FL S P+   P+ P R P  PA++
Sbjct: 403 PPRTPQEPQLPAESKPFLASKPKPQTPSLP-RPPGCPAQQ 441


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,648,821
Number of Sequences: 219361
Number of extensions: 442666
Number of successful extensions: 1860
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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