ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet24e12 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 208 bits (529), Expect = 6e-54 Identities = 103/132 (78%), Positives = 109/132 (82%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 MAA+TMALSSPA +KL+ GAS V G GR+TMR PWYG DRV YLGP Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 SGEPPSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 121 NGVKFGEAVWFK 132
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 208 bits (529), Expect = 6e-54 Identities = 103/132 (78%), Positives = 107/132 (81%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 MAA TMALSSP A+KL+ AS + G GRITMR PWYGPDRV YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 121 NGVKFGEAVWFK 132
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 207 bits (527), Expect = 1e-53 Identities = 102/128 (79%), Positives = 105/128 (82%), Gaps = 2/128 (1%) Frame = +3 Query: 72 MAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPLSGE 245 MAA TMALSSPA+ A+ V G GRITMR PWYG DRVLYLGPLSGE Sbjct: 1 MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGE 60 Query: 246 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425 PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 120 Query: 426 FGEAVWFK 449 FGEAVWFK Sbjct: 121 FGEAVWFK 128
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 204 bits (519), Expect = 8e-53 Identities = 100/132 (75%), Positives = 106/132 (80%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 MAA TMALSSP A+KL+ A + G GR++MR PWYGPDRV YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 121 NGVKFGEAVWFK 132
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 202 bits (513), Expect = 4e-52 Identities = 102/134 (76%), Positives = 108/134 (80%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLAG-ASYVLGGGRITMRXXXXX--XXXXXXPWYGPDRVLYL 227 MA++TMALSSP A+KL AS ++G GRITMR PWYGPDRV YL Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVWFK Sbjct: 121 ARNGVKFGEAVWFK 134
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 201 bits (512), Expect = 5e-52 Identities = 100/134 (74%), Positives = 108/134 (80%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXX--PWYGPDRVLYL 227 MAA+TMALSSP A+KL+ +S + G G++TMR PWYGPDRV YL Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVWFK Sbjct: 121 ARNGVKFGEAVWFK 134
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 201 bits (511), Expect = 7e-52 Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSPAMKLAG---ASYVLGGGRITMRXXXXX---XXXXXXPWYGPDRVLYLGP 233 MAA TMALSSP M A +S + G RITMR PWYG DRVLYLGP Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 121 NGVKFGEAVWFK 132
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 200 bits (508), Expect = 2e-51 Identities = 100/133 (75%), Positives = 107/133 (80%), Gaps = 7/133 (5%) Frame = +3 Query: 72 MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230 MAA+T ALSSP A+KL+ +S V G G++TMR PWYGPDRV YLG Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEAVWFK Sbjct: 121 RNGVKFGEAVWFK 133
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 199 bits (507), Expect = 2e-51 Identities = 100/133 (75%), Positives = 107/133 (80%), Gaps = 7/133 (5%) Frame = +3 Query: 72 MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230 MAA+T ALSSP A+KL+ +S V G G++TMR PWYGPDRV YLG Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLG 60 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEAVWFK Sbjct: 121 RNGVKFGEAVWFK 133
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 199 bits (506), Expect = 3e-51 Identities = 99/132 (75%), Positives = 103/132 (78%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 233 MA++TMALSS A S G R+TMR PWYGPDRVLYLGP Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 121 NGVKFGEAVWFK 132
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 198 bits (504), Expect = 5e-51 Identities = 99/134 (73%), Positives = 106/134 (79%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227 MA +TMALSS A+KL+ +S + G GR+TMR PWYGPDRV YL Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVWFK Sbjct: 121 ARNGVKFGEAVWFK 134
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 197 bits (502), Expect = 8e-51 Identities = 98/133 (73%), Positives = 105/133 (78%), Gaps = 7/133 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230 MAATTM+LSS A+K +S ++G R+ MR PWYG DRVLYLG Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 PLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEA WFK Sbjct: 121 RNGVKFGEAGWFK 133
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 197 bits (502), Expect = 8e-51 Identities = 99/134 (73%), Positives = 106/134 (79%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227 MAA TMALSS A+KL+ +S + G G++TMR PWYGPDRV YL Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVWFK Sbjct: 121 ARNGVKFGEAVWFK 134
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 197 bits (501), Expect = 1e-50 Identities = 97/130 (74%), Positives = 105/130 (80%), Gaps = 5/130 (3%) Frame = +3 Query: 75 AATTMALSSPAMKLAGASYVLGG-----GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLS 239 AA++MALSSP+ LAG + LG GR++MR PWYGPDRV YLGP S Sbjct: 3 AASSMALSSPS--LAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFS 60 Query: 240 GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419 GEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG Sbjct: 61 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120 Query: 420 VKFGEAVWFK 449 VKFGEAVWFK Sbjct: 121 VKFGEAVWFK 130
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 197 bits (500), Expect = 1e-50 Identities = 98/134 (73%), Positives = 107/134 (79%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227 MAA+TMALSS A+KL+ +S + G G++TMR PWYGP+RV YL Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVWFK Sbjct: 121 ARNGVKFGEAVWFK 134
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 197 bits (500), Expect = 1e-50 Identities = 101/133 (75%), Positives = 107/133 (80%), Gaps = 7/133 (5%) Frame = +3 Query: 72 MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 230 MAA+TMALSSPA +KL+ AS VLG GR+TMR PWYG DRV YLG Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEAVWFK Sbjct: 121 RNGVKFGEAVWFK 133
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 196 bits (499), Expect = 2e-50 Identities = 99/132 (75%), Positives = 107/132 (81%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSPAM-----KLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 MAA+TMALSSPA+ K+A +S + G GR++MR PWYGPDRV YLGP Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDS-PWYGPDRVKYLGP 59 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 120 NGVKFGEAVWFK 131
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 196 bits (499), Expect = 2e-50 Identities = 98/132 (74%), Positives = 103/132 (78%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 233 MA++TMALSS A S + G R+TMR PWYGPDRVLYLGP Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 121 NGVKFGEAVWFK 132
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 196 bits (498), Expect = 2e-50 Identities = 97/134 (72%), Positives = 105/134 (78%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLAGASY-VLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227 MAATTMALSS A+KL+ +S + G G++TMR PWYGPDRV YL Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 408 ARNGVKFGEAVWFK 449 ARNG+KFGEAVWFK Sbjct: 121 ARNGIKFGEAVWFK 134
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 196 bits (497), Expect = 3e-50 Identities = 98/134 (73%), Positives = 105/134 (78%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227 M A+TMALSSP A+KL+ +S + G G+ MR PWYGPDRV YL Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVWFK Sbjct: 121 ARNGVKFGEAVWFK 134
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 195 bits (496), Expect = 4e-50 Identities = 99/133 (74%), Positives = 103/133 (77%), Gaps = 7/133 (5%) Frame = +3 Query: 72 MAATTMALSSPAMK------LAGASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 230 MAA+TMALSSPA AS VLG GR+TMR PWYG DRV YLG Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEAVWFK Sbjct: 121 RNGVKFGEAVWFK 133
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 195 bits (496), Expect = 4e-50 Identities = 99/131 (75%), Positives = 104/131 (79%), Gaps = 5/131 (3%) Frame = +3 Query: 72 MAATTMALSSPAMKLAGASYVLGG---GRITMRXXXXX--XXXXXXPWYGPDRVLYLGPL 236 MAA+TMA+SS AM AG +G GRITMR PWYGPDRV YLGP Sbjct: 1 MAASTMAISSTAM--AGTPIKVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPF 58 Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416 SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN Sbjct: 59 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 118 Query: 417 GVKFGEAVWFK 449 GVKFGEAVWFK Sbjct: 119 GVKFGEAVWFK 129
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 195 bits (495), Expect = 5e-50 Identities = 95/133 (71%), Positives = 102/133 (76%), Gaps = 7/133 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230 MAA TMA+SS A+ + +S + G G+ TMR PWYGPDRV YLG Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL A Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEAVWFK Sbjct: 121 RNGVKFGEAVWFK 133
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 194 bits (494), Expect = 7e-50 Identities = 98/134 (73%), Positives = 104/134 (77%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227 MAA TMALSSP A+K + +S + G G+ TMR PWYGPDRV YL Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVWFK Sbjct: 121 ARNGVKFGEAVWFK 134
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 191 bits (486), Expect = 6e-49 Identities = 95/135 (70%), Positives = 102/135 (75%), Gaps = 9/135 (6%) Frame = +3 Query: 72 MAATTMALSSPAM-------KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLY 224 MAA++MALSSP + +S LGG R TMR PWYGPDRV Y Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60 Query: 225 LGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 404 LGP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL Sbjct: 61 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120 Query: 405 LARNGVKFGEAVWFK 449 L+RNGVKFGEAVWFK Sbjct: 121 LSRNGVKFGEAVWFK 135
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 191 bits (485), Expect = 7e-49 Identities = 96/134 (71%), Positives = 102/134 (76%), Gaps = 8/134 (5%) Frame = +3 Query: 72 MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227 MAA TMALSS +KL+ +S + G G+ TMR PWYGPDRV YL Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 408 ARNGVKFGEAVWFK 449 ARNGVKFGEAVW K Sbjct: 121 ARNGVKFGEAVWLK 134
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 191 bits (484), Expect = 9e-49 Identities = 96/132 (72%), Positives = 101/132 (76%), Gaps = 6/132 (4%) Frame = +3 Query: 72 MAATTMALSSPAM------KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 MAA TMALSS L+ +S V G R++MR PWYGPDRV YLGP Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKVGS-PWYGPDRVKYLGP 59 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 60 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 120 NGVKFGEAVWFK 131
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 191 bits (484), Expect = 9e-49 Identities = 94/134 (70%), Positives = 103/134 (76%), Gaps = 7/134 (5%) Frame = +3 Query: 69 AMAATTMALSSPAM-----KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227 A ++++MALSSP + KL +S LG R TMR PWYGPDRV YL Sbjct: 3 ASSSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYL 62 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL Sbjct: 63 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122 Query: 408 ARNGVKFGEAVWFK 449 +RNGVKFGEAVWFK Sbjct: 123 SRNGVKFGEAVWFK 136
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 189 bits (481), Expect = 2e-48 Identities = 94/138 (68%), Positives = 99/138 (71%), Gaps = 5/138 (3%) Frame = +3 Query: 51 CSIRQQAMAATTMALSSPAMK--LAGASYVLGGGRITMRXXXX---XXXXXXXPWYGPDR 215 C I A A ++ P L + V G R+TMR PWYGPDR Sbjct: 4 CGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDR 63 Query: 216 VLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 395 VLYLGP SGEPPSYL+GEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVF Sbjct: 64 VLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVF 123 Query: 396 PELLARNGVKFGEAVWFK 449 PELLARNGVKFGEAVWFK Sbjct: 124 PELLARNGVKFGEAVWFK 141
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 189 bits (481), Expect = 2e-48 Identities = 89/120 (74%), Positives = 96/120 (80%), Gaps = 1/120 (0%) Frame = +3 Query: 93 LSSPAMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGE 269 L+ A+KL+ A + G + TMR PWYGPDRV YLGP SGEPPSYL+GE Sbjct: 3 LAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62 Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK Sbjct: 63 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 122
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 189 bits (479), Expect = 4e-48 Identities = 94/131 (71%), Positives = 99/131 (75%), Gaps = 5/131 (3%) Frame = +3 Query: 72 MAATTMALSSPAM---KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPL 236 MAA TMA++S A+ AG V G GRITMR PWYG DRVLYLGPL Sbjct: 1 MAAATMAITSRALVGKPAAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPL 60 Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416 SG PPSYL+GEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLARN Sbjct: 61 SGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARN 120 Query: 417 GVKFGEAVWFK 449 GVKFGE VWFK Sbjct: 121 GVKFGEGVWFK 131
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 188 bits (478), Expect = 5e-48 Identities = 92/133 (69%), Positives = 100/133 (75%), Gaps = 7/133 (5%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230 MAA TMALSS A+ + +S + G++TMR PWYGPDRV YLG Sbjct: 1 MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLG 60 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P SGE PSYL+GEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL A Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFA 120 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEAVWFK Sbjct: 121 RNGVKFGEAVWFK 133
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 188 bits (478), Expect = 5e-48 Identities = 86/105 (81%), Positives = 89/105 (84%) Frame = +3 Query: 135 LGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 314 LG GR++MR PWYGPDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSAD Sbjct: 8 LGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 67 Query: 315 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 PETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFK Sbjct: 68 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFK 112
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 187 bits (474), Expect = 1e-47 Identities = 89/116 (76%), Positives = 92/116 (79%), Gaps = 3/116 (2%) Frame = +3 Query: 111 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 281 +L G G R+TMR PWYGPDRVLYLGP SGEPPSYL+GEFPGD Sbjct: 30 QLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGD 89 Query: 282 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 90 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 145
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 186 bits (472), Expect = 2e-47 Identities = 88/116 (75%), Positives = 92/116 (79%), Gaps = 3/116 (2%) Frame = +3 Query: 111 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 281 +L G G R+TMR PWYGPDRV+YLGP SGEPPSYL+GEFPGD Sbjct: 30 QLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGD 89 Query: 282 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 90 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 145
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 177 bits (449), Expect = 1e-44 Identities = 88/133 (66%), Positives = 101/133 (75%), Gaps = 1/133 (0%) Frame = +3 Query: 54 SIRQQAMAA-TTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 230 +I+Q A A T + S+ + GA +GGGR++MR WYGPDR YLG Sbjct: 5 AIQQSAFAGQTALKQSNELVCKIGA---VGGGRVSMRRTVKSAPTSI--WYGPDRPKYLG 59 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L+ Sbjct: 60 PFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119 Query: 411 RNGVKFGEAVWFK 449 +NGVKFGEAVWFK Sbjct: 120 KNGVKFGEAVWFK 132
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 176 bits (445), Expect = 3e-44 Identities = 88/134 (65%), Positives = 98/134 (73%), Gaps = 2/134 (1%) Frame = +3 Query: 54 SIRQQAMAATTMALSSPAM--KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYL 227 +I+Q A A T+ + K+ G GGR++MR WYGPDR YL Sbjct: 5 TIQQSAFAGQTLLKPQNELVRKVGG-----NGGRVSMRRTIKSAPESI--WYGPDRPKYL 57 Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 GP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 58 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117 Query: 408 ARNGVKFGEAVWFK 449 A+NGVKFGEAVWFK Sbjct: 118 AKNGVKFGEAVWFK 131
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 172 bits (435), Expect = 5e-43 Identities = 91/131 (69%), Positives = 97/131 (74%), Gaps = 5/131 (3%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPL 236 MAA+TMALSS AMKLA ++ LG GR++MR PWYGPDRV YLGP Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPF 60 Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416 SGE PSYL+GEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN Sbjct: 61 SGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 112 Query: 417 GVKFGEAVWFK 449 GVKFGEAVWFK Sbjct: 113 GVKFGEAVWFK 123
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 171 bits (434), Expect = 6e-43 Identities = 84/133 (63%), Positives = 95/133 (71%) Frame = +3 Query: 51 CSIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 230 C+I+Q A + S ++ G GRITMR WYG DR YLG Sbjct: 4 CAIQQSAFVGQAVGKSQNEFIRKVGNF--GEGRITMRRTVKSAPQSI--WYGEDRPKYLG 59 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L+ Sbjct: 60 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119 Query: 411 RNGVKFGEAVWFK 449 +NGVKFGEAVWFK Sbjct: 120 KNGVKFGEAVWFK 132
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 171 bits (433), Expect = 8e-43 Identities = 77/85 (90%), Positives = 80/85 (94%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374 PW+GPD V YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML Sbjct: 11 PWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 70 Query: 375 GALGCVFPELLARNGVKFGEAVWFK 449 GALGCVFPELL+RNGVKFGEAVWFK Sbjct: 71 GALGCVFPELLSRNGVKFGEAVWFK 95
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 171 bits (433), Expect = 8e-43 Identities = 85/132 (64%), Positives = 95/132 (71%) Frame = +3 Query: 54 SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 +I+Q A A T S + S+ GGGR TMR WYG DR YLGP Sbjct: 5 AIQQSAFAGQTALKSQNELVRKIGSF--GGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ Sbjct: 61 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120 Query: 414 NGVKFGEAVWFK 449 NGV FGEAVWFK Sbjct: 121 NGVTFGEAVWFK 132
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 171 bits (432), Expect = 1e-42 Identities = 85/132 (64%), Positives = 94/132 (71%) Frame = +3 Query: 54 SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 +I Q A A T S + S+ GGR TMR WYG DR YLGP Sbjct: 5 AIEQSAFAGQTALKSQNELVRKIGSF--NGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ Sbjct: 61 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120 Query: 414 NGVKFGEAVWFK 449 NGVKFGEAVWFK Sbjct: 121 NGVKFGEAVWFK 132
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 169 bits (429), Expect = 2e-42 Identities = 79/103 (76%), Positives = 85/103 (82%) Frame = +3 Query: 141 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 320 GGRITMR WYGPDR YLGP S + PSYL+GEFPGDYGWDTAGLSADPE Sbjct: 30 GGRITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 321 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFK Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFK 130 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 169 bits (428), Expect = 3e-42 Identities = 77/84 (91%), Positives = 78/84 (92%) Frame = +3 Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377 WYG DR LYLGP SG PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG Sbjct: 49 WYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 108 Query: 378 ALGCVFPELLARNGVKFGEAVWFK 449 ALGCV PELLA+NGVKFGEAVWFK Sbjct: 109 ALGCVTPELLAKNGVKFGEAVWFK 132
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 167 bits (424), Expect = 9e-42 Identities = 77/103 (74%), Positives = 84/103 (81%) Frame = +3 Query: 141 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 320 GGR+TMR WYG DR YLGP S + PSYL+GEFPGDYGWDTAGLSADPE Sbjct: 4 GGRVTMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61 Query: 321 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFK Sbjct: 62 TFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFK 104
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 166 bits (419), Expect = 3e-41 Identities = 78/101 (77%), Positives = 82/101 (81%) Frame = +3 Query: 147 RITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETF 326 RITMR WYGPDR YLGP S PSYL+GEFPGDYGWDTA +SADPETF Sbjct: 35 RITMRRTVRSAPESI--WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETF 92 Query: 327 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 AKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFK Sbjct: 93 AKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFK 133
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 162 bits (411), Expect = 3e-40 Identities = 77/104 (74%), Positives = 81/104 (77%) Frame = +3 Query: 138 GGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADP 317 G R TMR WYGPDR YLGP S + PSYL+GEFPGDYGWDTAGLSADP Sbjct: 31 GQARFTMRRTVKSAPESI--WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADP 88 Query: 318 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 ETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFK Sbjct: 89 ETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFK 132
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 162 bits (409), Expect = 5e-40 Identities = 83/132 (62%), Positives = 95/132 (71%), Gaps = 5/132 (3%) Frame = +3 Query: 69 AMAATTMA---LSSPAMKLAGASYVLGG--GRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233 AM +T +A L P +L+ VLG R+TMR WYG DR +LGP Sbjct: 6 AMHSTALAGQSLVKPVNELSRK--VLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGP 63 Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413 SGE PSYL+GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA+ Sbjct: 64 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123 Query: 414 NGVKFGEAVWFK 449 +GVKFGEAVWFK Sbjct: 124 SGVKFGEAVWFK 135 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query: 228 GPLSGE--PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 401 GPL GE P Y G F D GL+ DP+TFA+ + E+ + R AM G Sbjct: 182 GPL-GEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQA 234 Query: 402 LLARNG 419 ++ G Sbjct: 235 IVTGKG 240
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 159 bits (402), Expect = 3e-39 Identities = 74/102 (72%), Positives = 82/102 (80%) Frame = +3 Query: 144 GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPET 323 GR +MR WYG DR +LGP S + PSYL+GEFPGDYGWDTAGLSADPET Sbjct: 32 GRFSMRRTVKAVPQSI--WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89 Query: 324 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 FAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFK Sbjct: 90 FAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFK 131
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 150 bits (379), Expect = 1e-36 Identities = 68/73 (93%), Positives = 70/73 (95%) Frame = +3 Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410 P SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 411 RNGVKFGEAVWFK 449 RNGVKFGEAVWFK Sbjct: 61 RNGVKFGEAVWFK 73
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 149 bits (375), Expect = 4e-36 Identities = 82/147 (55%), Positives = 96/147 (65%), Gaps = 9/147 (6%) Frame = +3 Query: 36 ISSLLCSIRQQAMAATTMALS--------SPAMKLAGASYVLGGGRITMRXXXXXXXXXX 191 ++S + + +A+ A T LS SP +A A+ GRITM Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAAT----NGRITMGNDL------- 49 Query: 192 XPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 371 WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAM Sbjct: 50 --WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAM 107 Query: 372 LGALGCVFPELLAR-NGVKFGEAVWFK 449 LGALGCVFPE+L + GV+F E VWFK Sbjct: 108 LGALGCVFPEVLQKWVGVEFKEPVWFK 134 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Frame = +3 Query: 213 RVLYLGPLSGEPPSYLSGE------FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374 +VL +G + G + L G +PG +D GL+ DP TFA+ + E+ + R AM Sbjct: 166 QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225 Query: 375 GALGCVFPELLARNG 419 G ++ G Sbjct: 226 SMFGFFVQAIVTGKG 240
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 142 bits (359), Expect = 3e-34 Identities = 66/85 (77%), Positives = 71/85 (83%), Gaps = 1/85 (1%) Frame = +3 Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377 WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG Sbjct: 47 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106 Query: 378 ALGCVFPELLAR-NGVKFGEAVWFK 449 ALGC+FPE+L + V F E VWFK Sbjct: 107 ALGCIFPEVLEKWVKVDFKEPVWFK 131 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 137 bits (346), Expect = 9e-33 Identities = 64/85 (75%), Positives = 70/85 (82%), Gaps = 1/85 (1%) Frame = +3 Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377 WYGPDR +LGP S P+YL+GEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LG Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98 Query: 378 ALGCVFPELLAR-NGVKFGEAVWFK 449 ALG + PELL+ GVKFGE VWFK Sbjct: 99 ALGILTPELLSTYAGVKFGEPVWFK 123 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 137 bits (345), Expect = 1e-32 Identities = 63/85 (74%), Positives = 72/85 (84%), Gaps = 1/85 (1%) Frame = +3 Query: 198 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374 +YGP+R +LGP S P+YL+GEFPGDYGWDTAGLSADPETF + RELE+IH RWAML Sbjct: 36 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95 Query: 375 GALGCVFPELLARNGVKFGEAVWFK 449 GALGC PELLA++G KFGEAVWFK Sbjct: 96 GALGCQTPELLAKSGTKFGEAVWFK 120
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 133 bits (334), Expect = 2e-31 Identities = 64/79 (81%), Positives = 67/79 (84%) Frame = +3 Query: 213 RVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 392 RV YLGP SGE PSYL+GEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+ Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117 Query: 393 FPELLARNGVKFGEAVWFK 449 FPELL+ G FGEAVWFK Sbjct: 118 FPELLSVMGQGFGEAVWFK 136
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 127 bits (320), Expect = 1e-29 Identities = 59/86 (68%), Positives = 72/86 (83%), Gaps = 2/86 (2%) Frame = +3 Query: 198 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374 +YGPDR +LGP S + P YL+GEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 375 GALGCVFPELLAR-NGVKFGEAVWFK 449 GALG + PELL++ GV+FGE VWFK Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFK 118 Score = 30.4 bits (67), Expect = 2.1 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 101 bits (252), Expect = 7e-22 Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 2/86 (2%) Frame = +3 Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377 +YGPD L + P +GEFPGDYGWDTAGLSADPETF + RELE+IH R +LG Sbjct: 57 FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLG 115 Query: 378 ALGCVFPELLA-RNGVKFGE-AVWFK 449 ALG V PELLA +G+KFG+ A+WFK Sbjct: 116 ALGMVTPELLADEDGIKFGDAAIWFK 141 Score = 32.3 bits (72), Expect = 0.56 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +3 Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 94.0 bits (232), Expect = 2e-19 Identities = 49/88 (55%), Positives = 57/88 (64%), Gaps = 4/88 (4%) Frame = +3 Query: 198 WYGPDRVLYL--GPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 368 WYGPDR ++L G L E P YL+GE GDYG+D GL PE FAK + E+IH RWA Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121 Query: 369 MLGALGCVFPELLARNGVKFG-EAVWFK 449 MLGA G + PE L + G G EAVWFK Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFK 149
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 80.1 bits (196), Expect = 2e-15 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%) Frame = +3 Query: 87 MALSSPAMKLAGA------SYVLGGGRITMRXXXXXXXXXXXPWY----GPDRVLYLGPL 236 +A SSP+ + G+ + LGG R+ + PDR L+ Sbjct: 13 VAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP-- 70 Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416 PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + Sbjct: 71 GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKI 130 Query: 417 GV 422 G+ Sbjct: 131 GI 132
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 73.9 bits (180), Expect = 2e-13 Identities = 34/72 (47%), Positives = 44/72 (61%) Frame = +3 Query: 207 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386 PDR L+ PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G Sbjct: 63 PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120 Query: 387 CVFPELLARNGV 422 PE L + GV Sbjct: 121 IFIPEFLTKIGV 132
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 70.5 bits (171), Expect = 2e-12 Identities = 34/68 (50%), Positives = 43/68 (63%) Frame = +3 Query: 246 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425 PP YL+GE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 426 FGEAVWFK 449 G WF+ Sbjct: 434 -GNGAWFQ 440 Score = 68.6 bits (166), Expect = 7e-12 Identities = 32/71 (45%), Positives = 45/71 (63%) Frame = +3 Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416 + EPP+ L+GE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 417 GVKFGEAVWFK 449 G+ WF+ Sbjct: 250 ----GKGAWFE 256 Score = 62.8 bits (151), Expect = 4e-10 Identities = 30/67 (44%), Positives = 44/67 (65%) Frame = +3 Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428 PS+L+GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 429 GEAVWFK 449 G+ +W++ Sbjct: 65 GKGIWYE 71
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 64.7 bits (156), Expect = 1e-10 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +3 Query: 234 LSGEP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 62.4 bits (150), Expect = 5e-10 Identities = 28/69 (40%), Positives = 43/69 (62%) Frame = +3 Query: 243 EPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 422 +PP++L+GE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 423 KFGEAVWFK 449 G+ WF+ Sbjct: 222 --GKGAWFE 228 Score = 37.4 bits (85), Expect = 0.017 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = +3 Query: 315 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 449 P + + R EV + R AML +GCV+PELL G VWF+ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFE 38
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 55.5 bits (132), Expect = 6e-08 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +3 Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 422 P YL+G GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 121
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 53.9 bits (128), Expect = 2e-07 Identities = 28/63 (44%), Positives = 35/63 (55%) Frame = +3 Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428 P +L G PGDYG+D GL DP RE E+IH RWAM LG + A +G+ + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ--AWSGIPW 125 Query: 429 GEA 437 EA Sbjct: 126 FEA 128
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 53.9 bits (128), Expect = 2e-07 Identities = 24/46 (52%), Positives = 28/46 (60%) Frame = +3 Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386 P +L G PGD+G+D GL DP RE E+IH RWAML LG Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 53.5 bits (127), Expect = 2e-07 Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 13/139 (9%) Frame = +3 Query: 72 MAATTMALSSPAMKLAGASYVLGGGRITM---RXXXXXXXXXXXP--WYGPDRVLYLGPL 236 MA + SS A A+ + G RI+ R P G +R L+ Sbjct: 1 MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFA-- 58 Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 398 S + SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + P Sbjct: 59 SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117 Query: 399 ELLARNGVKFGEA--VWFK 449 E+L + G+ E WF+ Sbjct: 118 EILGKAGLIPQETALAWFQ 136
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/63 (42%), Positives = 35/63 (55%) Frame = +3 Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428 P +L G PGD+G+D GL DP RE E+IH RWAM LG + A +G+ + Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ--AWSGIPW 125 Query: 429 GEA 437 EA Sbjct: 126 FEA 128
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 40.0 bits (92), Expect = 0.003 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +3 Query: 225 LGPLSGEPPSYL-SGEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 398 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 399 ELLARN--GVKFGEAVW 443 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 38.9 bits (89), Expect = 0.006 Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 200 MAA TMALSSP A+KL+ AS + G GRITMR PW Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPW 49
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 36.6 bits (83), Expect = 0.030 Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 43/106 (40%) Frame = +3 Query: 249 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 335 P YL G GDYG+D GL E AKN Sbjct: 62 PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPF 121 Query: 336 ------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 437 RE E+IH RWAML LG + E L GV + +A Sbjct: 122 QPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGVTWQDA 165 Score = 33.9 bits (76), Expect = 0.19 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +3 Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 36.6 bits (83), Expect = 0.030 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 45/108 (41%) Frame = +3 Query: 249 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 335 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 336 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 437 RE E+IH RWAML LG + E A GV + EA Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 36.6 bits (83), Expect = 0.030 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3 Query: 399 ELLARNGVKFGEAVWFK 449 ELL +NGVKFGEAVWFK Sbjct: 1 ELLVKNGVKFGEAVWFK 17
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 35.8 bits (81), Expect = 0.050 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +3 Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255 Score = 34.7 bits (78), Expect = 0.11 Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 44/120 (36%) Frame = +3 Query: 210 DRVL-YLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------ 335 DR L Y G +S P +L G GDYG+D GL E AKN Sbjct: 54 DRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVI 110 Query: 336 --------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 437 RE E+IH RWAML LG + E L GV + +A Sbjct: 111 GTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL--TGVTWQDA 168
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 35.8 bits (81), Expect = 0.050 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 43/97 (44%) Frame = +3 Query: 246 PPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 335 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 336 -------------RELEVIHCRWAMLGALGCVFPELL 407 RE E+IH RWAMLG LG + E L Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +3 Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 383 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 34.7 bits (78), Expect = 0.11 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +3 Query: 72 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 200 MAA MALSSP A+KL+ AS G GRITMR PW Sbjct: 1 MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPW 49
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 32.7 bits (73), Expect = 0.43 Identities = 24/84 (28%), Positives = 43/84 (51%) Frame = -3 Query: 448 LNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 269 L + S +L P +SSSG + S P Q+Q ++S++ S S+ + + ++ SP N Sbjct: 225 LATSTSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPNN 277 Query: 268 SPLR*LGGSPESGPR*STRSGPYH 197 + R +GG+ S +T + H Sbjct: 278 NGARSVGGAATSAATGTTAAAGSH 301
>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 454 Score = 30.4 bits (67), Expect = 2.1 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -1 Query: 369 WPSGNGSPPAHGSWRRSPGQQR 304 WP+ +GSP A GSW SPG++R Sbjct: 312 WPAPSGSPDA-GSWLPSPGRRR 332
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 304 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = -2 Query: 440 DGLAELDTVASEQLGEDAAERAEHGPAAMDHLQLTVLGEGLRVSREPRGVP 288 DG+ +L V +L E AAER HG A H V G G R VP Sbjct: 70 DGVCDLGIVGQNELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 6/36 (16%) Frame = +3 Query: 72 MAATTMALSSPA-----MKLA-GASYVLGGGRITMR 161 MAA+TMALSS +KLA +S + G GRITMR Sbjct: 1 MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMR 36
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.0 bits (66), Expect = 2.8 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 365 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184 Query: 366 AMLGALGC---VFP-----ELLARNGVKFGEAVW 443 A + G V P ++ G++ G+ +W Sbjct: 185 AGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 29.6 bits (65), Expect = 3.6 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Frame = -3 Query: 448 LNQTASPNLTP----LRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP* 281 ++ T +P +TP + +S PSAP+M+ + +S+S + S PAVSQ Sbjct: 400 MSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ-- 457 Query: 280 SPGNSPLR*LGGSPESGPR 224 G S LG S ES R Sbjct: 458 GFGQSTTTTLGPSFESNER 476
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.6 bits (65), Expect = 3.6 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 365 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184 Query: 366 A---MLGALGCVFP-----ELLARNGVKFGEAVW 443 A + G V P ++ G++ G+ +W Sbjct: 185 AGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.6 bits (65), Expect = 3.6 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 365 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184 Query: 366 A---MLGALGCVFP-----ELLARNGVKFGEAVW 443 A + G V P ++ G++ G+ +W Sbjct: 185 AGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 29.3 bits (64), Expect = 4.7 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Frame = -3 Query: 448 LNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 269 L+ +P L + + SAP+ Q + S+S+ L ++ S+ SP+ +P +P Sbjct: 1325 LSSPEAPEAPSLAPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLL 1384 Query: 268 SPLR*LGG----SPES-GPR*S-TRSGPYHG 194 P LG SPE+ GPR + + +HG Sbjct: 1385 YPQMALGTSSAISPETDGPRVTEPEAASFHG 1415
>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 452 Score = 29.3 bits (64), Expect = 4.7 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1 Query: 369 WPSGNGSPPAHGSWRRSPGQQR 304 WP+ +G+P A GSW SPG++R Sbjct: 310 WPAPSGAPDA-GSWLPSPGRRR 330
>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)| Length = 335 Score = 29.3 bits (64), Expect = 4.7 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFP----------GDYGWDTAGLSADPETFAKNREL 344 P+YGP VLY G S L EFP G G + S D F+ +R Sbjct: 56 PYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRSC 110 Query: 345 EVIHCRWAMLGALGCV----FPELL 407 E +H + L L V FP++L Sbjct: 111 ERLHTTYLDLVYLHDVEFVKFPDIL 135
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 4.7 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +3 Query: 318 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 4.7 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +3 Query: 318 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)| (Lymphocyte antigen 64) Length = 573 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -3 Query: 406 SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS 266 SSSG T P +Q +S + SG A P Q SPG+S Sbjct: 27 SSSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSS 73
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed| Length = 552 Score = 29.3 bits (64), Expect = 4.7 Identities = 23/69 (33%), Positives = 33/69 (47%) Frame = -3 Query: 448 LNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 269 + Q A+P +T SSS + S P + I+S+S +A S S+ S S S + Sbjct: 306 IGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSS-VATSSSSSSSGCSSAASSLNS 364 Query: 268 SPLR*LGGS 242 SP LG S Sbjct: 365 SPSSRLGAS 373
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.3 bits (64), Expect = 4.7 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.3 bits (64), Expect = 4.7 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.3 bits (64), Expect = 4.7 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180
>SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit (Sodium| channel protein type V alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.5) (Sodium channel protein, cardiac muscle alpha-subunit) (HH1) Length = 2016 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Frame = -2 Query: 410 SEQLGEDAAERA--EHGPAAMDHLQLTVLGEGL-RVSREPR 297 +E+ GED ++ E GP AM+HL LT GL R S +PR Sbjct: 486 TEECGEDRLPKSDSEDGPRAMNHLSLT---RGLSRTSMKPR 523
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington| disease gene regulatory region-binding protein 1) (HDBP-1) Length = 387 Score = 28.9 bits (63), Expect = 6.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +3 Query: 246 PPSYLSGEFPGDYGWDTAGLSADPET 323 P SY S GD+GWD A + P T Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 180
>YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicase in ATS1-TPD3| intergenic region (EC 3.6.1.-) Length = 1131 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -3 Query: 421 TPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSP 263 +P + +SS +P++P++ + SRF K S +E S+P P SP Sbjct: 20 SPTKVASSSPLKPTSPTVPDASVASLRSRFTFKPSDPSEGAHTSKP-LPSGSP 71
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 28.9 bits (63), Expect = 6.2 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +3 Query: 261 SGEFPGDYGWDTAGLSADPET--FAKNRELEVIHCRWAMLGALGCVFPELL 407 SG F G WD L+A + RE E+ H R AML ALG V E L Sbjct: 67 SGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 28.9 bits (63), Expect = 6.2 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 11/94 (11%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 365 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 158 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 214 Query: 366 AMLGALGCVFPELLAR--------NGVKFGEAVW 443 A + G + A+ G++ G+ +W Sbjct: 215 AGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 181
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 28.5 bits (62), Expect = 8.1 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = -3 Query: 442 QTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS- 266 Q +P +S + + QP+ P A T++ R L + S E+ + SPG+S Sbjct: 237 QPPAPANQDQNSSQNARLQPTPPIQAPAPKPTAAPRPLDRESPGVENKLIPPVGSPGSST 296 Query: 265 PLR*LGGSPESGP 227 PL G P S P Sbjct: 297 PLPPDGTGPNSTP 309
>TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) (Lysosomal pepstatin insensitive protease) (LPIC) Length = 563 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -3 Query: 439 TASPNLTPLRA-SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAV 293 ++SP+L P ++SG+ P +++ W+ S+S + VSG++ S V Sbjct: 431 SSSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNSVPIPWVSGTSASTPV 480
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)| Length = 717 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -3 Query: 439 TASPNLTPLRASSSGKTQPSAPSMAQRQWITSSS 338 +ASP+ +PL SS + S+ S +Q + TSSS Sbjct: 490 SASPSYSPLSVDSSNVSSSSSSSSSQSSFTTSSS 523
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 28.5 bits (62), Expect = 8.1 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 2/105 (1%) Frame = -3 Query: 442 QTASPNLTPLRASSSGKTQ--PSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 269 + A+P P +++ Q P AP+ +++R A G + PA QP PG Sbjct: 103 EAAAPPAQPGGTATTPAAQATPEAPARPG----PAAARPSAPAPGQPKPPAPGQPPRPGA 158 Query: 268 SPLR*LGGSPESGPR*STRSGPYHGXXXXXXXXXXLRMVMRPPPR 134 +P G P P+ + R+ P G R + RP PR Sbjct: 159 TP----GPRPGPAPKPAART-PRVGNNPFSSAQPVDRPIPRPVPR 198
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 314 PW+G ++ L ++G P + FPG G G+ AD Sbjct: 129 PWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,263,617 Number of Sequences: 219361 Number of extensions: 855512 Number of successful extensions: 3502 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 3303 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3450 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
