ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet24e09 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 240 bits (612), Expect = 1e-63 Identities = 119/148 (80%), Positives = 125/148 (84%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 MAA+TMALSSPA +KL+ GAS V G GR+TMR PWYG DRV YLGP Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 SGEPPSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 240 bits (612), Expect = 1e-63 Identities = 119/148 (80%), Positives = 123/148 (83%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 MAA TMALSSP A+KL+ AS + G GRITMR PWYGPDRV YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 239 bits (610), Expect = 2e-63 Identities = 118/144 (81%), Positives = 121/144 (84%), Gaps = 2/144 (1%) Frame = +2 Query: 35 MAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPLSGE 208 MAA TMALSSPA+ A+ V G GRITMR PWYG DRVLYLGPLSGE Sbjct: 1 MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGE 60 Query: 209 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 388 PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 120 Query: 389 FGEAVWFKAGSQIFSEGGLDYLGN 460 FGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 FGEAVWFKAGSQIFSEGGLDYLGN 144
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 236 bits (602), Expect = 2e-62 Identities = 116/148 (78%), Positives = 122/148 (82%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 MAA TMALSSP A+KL+ A + G GR++MR PWYGPDRV YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 234 bits (596), Expect = 1e-61 Identities = 118/150 (78%), Positives = 124/150 (82%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLAG-ASYVLGGGRITMRXXXXX--XXXXXXPWYGPDRVLYL 190 MA++TMALSSP A+KL AS ++G GRITMR PWYGPDRV YL Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 150
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 233 bits (595), Expect = 1e-61 Identities = 116/150 (77%), Positives = 124/150 (82%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXX--PWYGPDRVLYL 190 MAA+TMALSSP A+KL+ +S + G G++TMR PWYGPDRV YL Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 150
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 233 bits (594), Expect = 2e-61 Identities = 117/148 (79%), Positives = 120/148 (81%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSPAMKLAG---ASYVLGGGRITMRXXXXX---XXXXXXPWYGPDRVLYLGP 196 MAA TMALSSP M A +S + G RITMR PWYG DRVLYLGP Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 232 bits (591), Expect = 4e-61 Identities = 116/149 (77%), Positives = 123/149 (82%), Gaps = 7/149 (4%) Frame = +2 Query: 35 MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 193 MAA+T ALSSP A+KL+ +S V G G++TMR PWYGPDRV YLG Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 149
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 231 bits (590), Expect = 5e-61 Identities = 116/149 (77%), Positives = 123/149 (82%), Gaps = 7/149 (4%) Frame = +2 Query: 35 MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 193 MAA+T ALSSP A+KL+ +S V G G++TMR PWYGPDRV YLG Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLG 60 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 149
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 231 bits (589), Expect = 7e-61 Identities = 115/148 (77%), Positives = 119/148 (80%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 196 MA++TMALSS A S G R+TMR PWYGPDRVLYLGP Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 230 bits (587), Expect = 1e-60 Identities = 115/150 (76%), Positives = 122/150 (81%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 190 MA +TMALSS A+KL+ +S + G GR+TMR PWYGPDRV YL Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 150
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 229 bits (585), Expect = 2e-60 Identities = 115/150 (76%), Positives = 122/150 (81%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 190 MAA TMALSS A+KL+ +S + G G++TMR PWYGPDRV YL Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 150
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 229 bits (584), Expect = 3e-60 Identities = 113/146 (77%), Positives = 121/146 (82%), Gaps = 5/146 (3%) Frame = +2 Query: 38 AATTMALSSPAMKLAGASYVLGG-----GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLS 202 AA++MALSSP+ LAG + LG GR++MR PWYGPDRV YLGP S Sbjct: 3 AASSMALSSPS--LAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFS 60 Query: 203 GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 382 GEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG Sbjct: 61 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120 Query: 383 VKFGEAVWFKAGSQIFSEGGLDYLGN 460 VKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 VKFGEAVWFKAGSQIFSEGGLDYLGN 146
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 228 bits (582), Expect = 4e-60 Identities = 115/148 (77%), Positives = 123/148 (83%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSPAM-----KLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 MAA+TMALSSPA+ K+A +S + G GR++MR PWYGPDRV YLGP Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDS-PWYGPDRVKYLGP 59 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 147
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 228 bits (582), Expect = 4e-60 Identities = 113/149 (75%), Positives = 121/149 (81%), Gaps = 7/149 (4%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 193 MAATTM+LSS A+K +S ++G R+ MR PWYG DRVLYLG Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 PLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEA WFKAGSQIFS+GGLDYLGN Sbjct: 121 RNGVKFGEAGWFKAGSQIFSDGGLDYLGN 149
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 228 bits (582), Expect = 4e-60 Identities = 114/148 (77%), Positives = 119/148 (80%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 196 MA++TMALSS A S + G R+TMR PWYGPDRVLYLGP Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 228 bits (580), Expect = 7e-60 Identities = 114/150 (76%), Positives = 121/150 (80%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 190 M A+TMALSSP A+KL+ +S + G G+ MR PWYGPDRV YL Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 150
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 228 bits (580), Expect = 7e-60 Identities = 116/149 (77%), Positives = 123/149 (82%), Gaps = 7/149 (4%) Frame = +2 Query: 35 MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 193 MAA+TMALSSPA +KL+ AS VLG GR+TMR PWYG DRV YLG Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEAVWFKAGSQIFS+GGLDYLGN Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGN 149
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 227 bits (579), Expect = 1e-59 Identities = 115/147 (78%), Positives = 120/147 (81%), Gaps = 5/147 (3%) Frame = +2 Query: 35 MAATTMALSSPAMKLAGASYVLGG---GRITMRXXXXX--XXXXXXPWYGPDRVLYLGPL 199 MAA+TMA+SS AM AG +G GRITMR PWYGPDRV YLGP Sbjct: 1 MAASTMAISSTAM--AGTPIKVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPF 58 Query: 200 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 379 SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN Sbjct: 59 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 118 Query: 380 GVKFGEAVWFKAGSQIFSEGGLDYLGN 460 GVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 119 GVKFGEAVWFKAGSQIFSEGGLDYLGN 145
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 227 bits (578), Expect = 1e-59 Identities = 112/150 (74%), Positives = 121/150 (80%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLAGASY-VLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 190 MAATTMALSS A+KL+ +S + G G++TMR PWYGPDRV YL Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNG+KFGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 121 ARNGIKFGEAVWFKAGAQIFSEGGLDYLGN 150
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 227 bits (578), Expect = 1e-59 Identities = 111/149 (74%), Positives = 118/149 (79%), Gaps = 7/149 (4%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 193 MAA TMA+SS A+ + +S + G G+ TMR PWYGPDRV YLG Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL A Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 149
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 226 bits (577), Expect = 2e-59 Identities = 114/150 (76%), Positives = 120/150 (80%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 190 MAA TMALSSP A+K + +S + G G+ TMR PWYGPDRV YL Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 150
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 226 bits (576), Expect = 2e-59 Identities = 112/150 (74%), Positives = 122/150 (81%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 190 MAA+TMALSS A+KL+ +S + G G++TMR PWYGP+RV YL Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVWFK GSQIFS+GGLDYLGN Sbjct: 121 ARNGVKFGEAVWFKGGSQIFSQGGLDYLGN 150
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 226 bits (576), Expect = 2e-59 Identities = 114/149 (76%), Positives = 119/149 (79%), Gaps = 7/149 (4%) Frame = +2 Query: 35 MAATTMALSSPAMK------LAGASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 193 MAA+TMALSSPA AS VLG GR+TMR PWYG DRV YLG Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEAVWFKAGSQIFS+GGLDYLGN Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGN 149
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 223 bits (569), Expect = 1e-58 Identities = 111/151 (73%), Positives = 118/151 (78%), Gaps = 9/151 (5%) Frame = +2 Query: 35 MAATTMALSSPAM-------KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLY 187 MAA++MALSSP + +S LGG R TMR PWYGPDRV Y Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60 Query: 188 LGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 367 LGP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL Sbjct: 61 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120 Query: 368 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 151
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 223 bits (568), Expect = 2e-58 Identities = 112/150 (74%), Positives = 118/150 (78%), Gaps = 8/150 (5%) Frame = +2 Query: 35 MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 190 MAA TMALSS +KL+ +S + G G+ TMR PWYGPDRV YL Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ARNGVKFGEAVW KAGSQIFSEGGLDYLGN Sbjct: 121 ARNGVKFGEAVWLKAGSQIFSEGGLDYLGN 150
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 223 bits (567), Expect = 2e-58 Identities = 110/150 (73%), Positives = 119/150 (79%), Gaps = 7/150 (4%) Frame = +2 Query: 32 AMAATTMALSSPAM-----KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 190 A ++++MALSSP + KL +S LG R TMR PWYGPDRV YL Sbjct: 3 ASSSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYL 62 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL Sbjct: 63 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 +RNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 152
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 221 bits (564), Expect = 5e-58 Identities = 105/136 (77%), Positives = 112/136 (82%), Gaps = 1/136 (0%) Frame = +2 Query: 56 LSSPAMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGE 232 L+ A+KL+ A + G + TMR PWYGPDRV YLGP SGEPPSYL+GE Sbjct: 3 LAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62 Query: 233 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 412 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK Sbjct: 63 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 122 Query: 413 AGSQIFSEGGLDYLGN 460 AGSQIFSEGGLDYLGN Sbjct: 123 AGSQIFSEGGLDYLGN 138
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 220 bits (561), Expect = 1e-57 Identities = 102/121 (84%), Positives = 105/121 (86%) Frame = +2 Query: 98 LGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 277 LG GR++MR PWYGPDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSAD Sbjct: 8 LGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 67 Query: 278 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 457 PETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAGSQIFSEGGLDYLG Sbjct: 68 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLG 127 Query: 458 N 460 N Sbjct: 128 N 128
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 220 bits (561), Expect = 1e-57 Identities = 109/154 (70%), Positives = 115/154 (74%), Gaps = 5/154 (3%) Frame = +2 Query: 14 CSIRQQAMAATTMALSSPAMK--LAGASYVLGGGRITMRXXXX---XXXXXXXPWYGPDR 178 C I A A ++ P L + V G R+TMR PWYGPDR Sbjct: 4 CGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDR 63 Query: 179 VLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 358 VLYLGP SGEPPSYL+GEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVF Sbjct: 64 VLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVF 123 Query: 359 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 PELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 124 PELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 157
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 219 bits (557), Expect = 3e-57 Identities = 107/149 (71%), Positives = 115/149 (77%), Gaps = 7/149 (4%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 193 MAA TMALSS A+ + +S + G++TMR PWYGPDRV YLG Sbjct: 1 MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLG 60 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P SGE PSYL+GEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL A Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFA 120 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEAVWFKAGSQIF EGGLDYLGN Sbjct: 121 RNGVKFGEAVWFKAGSQIFKEGGLDYLGN 149
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 218 bits (556), Expect = 4e-57 Identities = 110/148 (74%), Positives = 115/148 (77%), Gaps = 6/148 (4%) Frame = +2 Query: 35 MAATTMALSSPAM------KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 MAA TMALSS L+ +S V G R++MR PWYGPDRV YLGP Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKVGS-PWYGPDRVKYLGP 59 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR Sbjct: 60 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFK GSQIFSEGGL YLGN Sbjct: 120 NGVKFGEAVWFKKGSQIFSEGGLQYLGN 147
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 216 bits (549), Expect = 3e-56 Identities = 103/132 (78%), Positives = 108/132 (81%), Gaps = 3/132 (2%) Frame = +2 Query: 74 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 244 +L G G R+TMR PWYGPDRVLYLGP SGEPPSYL+GEFPGD Sbjct: 30 QLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGD 89 Query: 245 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 424 YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+Q Sbjct: 90 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ 149 Query: 425 IFSEGGLDYLGN 460 IFSEGGLDYLG+ Sbjct: 150 IFSEGGLDYLGS 161
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 215 bits (547), Expect = 5e-56 Identities = 102/132 (77%), Positives = 108/132 (81%), Gaps = 3/132 (2%) Frame = +2 Query: 74 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 244 +L G G R+TMR PWYGPDRV+YLGP SGEPPSYL+GEFPGD Sbjct: 30 QLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGD 89 Query: 245 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 424 YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+Q Sbjct: 90 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ 149 Query: 425 IFSEGGLDYLGN 460 IFSEGGLDYLG+ Sbjct: 150 IFSEGGLDYLGS 161
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 214 bits (544), Expect = 1e-55 Identities = 107/147 (72%), Positives = 113/147 (76%), Gaps = 5/147 (3%) Frame = +2 Query: 35 MAATTMALSSPAM---KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPL 199 MAA TMA++S A+ AG V G GRITMR PWYG DRVLYLGPL Sbjct: 1 MAAATMAITSRALVGKPAAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPL 60 Query: 200 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 379 SG PPSYL+GEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLARN Sbjct: 61 SGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARN 120 Query: 380 GVKFGEAVWFKAGSQIFSEGGLDYLGN 460 GVKFGE VWFKAGSQIFSEGGL + GN Sbjct: 121 GVKFGEGVWFKAGSQIFSEGGLSHPGN 147
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 209 bits (532), Expect = 3e-54 Identities = 104/149 (69%), Positives = 117/149 (78%), Gaps = 1/149 (0%) Frame = +2 Query: 17 SIRQQAMAA-TTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 193 +I+Q A A T + S+ + GA +GGGR++MR WYGPDR YLG Sbjct: 5 AIQQSAFAGQTALKQSNELVCKIGA---VGGGRVSMRRTVKSAPTSI--WYGPDRPKYLG 59 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L+ Sbjct: 60 PFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 +NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 206 bits (524), Expect = 2e-53 Identities = 103/150 (68%), Positives = 113/150 (75%), Gaps = 2/150 (1%) Frame = +2 Query: 17 SIRQQAMAATTMALSSPAM--KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYL 190 +I+Q A A T+ + K+ G GGR++MR WYGPDR YL Sbjct: 5 TIQQSAFAGQTLLKPQNELVRKVGG-----NGGRVSMRRTIKSAPESI--WYGPDRPKYL 57 Query: 191 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 370 GP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 58 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117 Query: 371 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 A+NGVKFGEAVWFKAGSQIF EGGLDYLGN Sbjct: 118 AKNGVKFGEAVWFKAGSQIFQEGGLDYLGN 147
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 204 bits (518), Expect = 1e-52 Identities = 107/147 (72%), Positives = 113/147 (76%), Gaps = 5/147 (3%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPL 199 MAA+TMALSS AMKLA ++ LG GR++MR PWYGPDRV YLGP Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPF 60 Query: 200 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 379 SGE PSYL+GEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN Sbjct: 61 SGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 112 Query: 380 GVKFGEAVWFKAGSQIFSEGGLDYLGN 460 GVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 113 GVKFGEAVWFKAGSQIFSEGGLDYLGN 139
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 203 bits (517), Expect = 1e-52 Identities = 100/149 (67%), Positives = 111/149 (74%) Frame = +2 Query: 14 CSIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 193 C+I+Q A + S ++ G GRITMR WYG DR YLG Sbjct: 4 CAIQQSAFVGQAVGKSQNEFIRKVGNF--GEGRITMRRTVKSAPQSI--WYGEDRPKYLG 59 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L+ Sbjct: 60 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 +NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 203 bits (516), Expect = 2e-52 Identities = 101/148 (68%), Positives = 111/148 (75%) Frame = +2 Query: 17 SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 +I+Q A A T S + S+ GGGR TMR WYG DR YLGP Sbjct: 5 AIQQSAFAGQTALKSQNELVRKIGSF--GGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ Sbjct: 61 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGV FGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVTFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 203 bits (516), Expect = 2e-52 Identities = 93/101 (92%), Positives = 96/101 (95%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 337 PW+GPD V YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML Sbjct: 11 PWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 70 Query: 338 GALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 GALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 71 GALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 111
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 202 bits (515), Expect = 3e-52 Identities = 101/148 (68%), Positives = 110/148 (74%) Frame = +2 Query: 17 SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 +I Q A A T S + S+ GGR TMR WYG DR YLGP Sbjct: 5 AIEQSAFAGQTALKSQNELVRKIGSF--NGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++ Sbjct: 61 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 NGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 200 bits (509), Expect = 1e-51 Identities = 94/119 (78%), Positives = 101/119 (84%) Frame = +2 Query: 104 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 283 GGRITMR WYGPDR YLGP S + PSYL+GEFPGDYGWDTAGLSADPE Sbjct: 30 GGRITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 284 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGN 146 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +2 Query: 233 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 382 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 200 bits (508), Expect = 2e-51 Identities = 92/100 (92%), Positives = 94/100 (94%) Frame = +2 Query: 161 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 340 WYG DR LYLGP SG PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG Sbjct: 49 WYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 108 Query: 341 ALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN Sbjct: 109 ALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 148
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 199 bits (507), Expect = 2e-51 Identities = 93/119 (78%), Positives = 100/119 (84%) Frame = +2 Query: 104 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 283 GGR+TMR WYG DR YLGP S + PSYL+GEFPGDYGWDTAGLSADPE Sbjct: 4 GGRVTMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61 Query: 284 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 62 TFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGN 120
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 194 bits (494), Expect = 7e-50 Identities = 92/117 (78%), Positives = 97/117 (82%) Frame = +2 Query: 110 RITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETF 289 RITMR WYGPDR YLGP S PSYL+GEFPGDYGWDTA +SADPETF Sbjct: 35 RITMRRTVRSAPESI--WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETF 92 Query: 290 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 AKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAG+QIFSEGGLDY GN Sbjct: 93 AKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGN 149
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 193 bits (491), Expect = 2e-49 Identities = 92/120 (76%), Positives = 97/120 (80%) Frame = +2 Query: 101 GGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADP 280 G R TMR WYGPDR YLGP S + PSYL+GEFPGDYGWDTAGLSADP Sbjct: 31 GQARFTMRRTVKSAPESI--WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADP 88 Query: 281 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAGSQIF+EGGLDYLGN Sbjct: 89 ETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 148
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 192 bits (489), Expect = 3e-49 Identities = 98/148 (66%), Positives = 111/148 (75%), Gaps = 5/148 (3%) Frame = +2 Query: 32 AMAATTMA---LSSPAMKLAGASYVLGG--GRITMRXXXXXXXXXXXPWYGPDRVLYLGP 196 AM +T +A L P +L+ VLG R+TMR WYG DR +LGP Sbjct: 6 AMHSTALAGQSLVKPVNELSRK--VLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGP 63 Query: 197 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 376 SGE PSYL+GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA+ Sbjct: 64 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123 Query: 377 NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 +GVKFGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 124 SGVKFGEAVWFKAGAQIFSEGGLDYLGN 151 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +2 Query: 191 GPLSGE--PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 364 GPL GE P Y G F D GL+ DP+TFA+ + E+ + R AM G Sbjct: 182 GPL-GEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQA 234 Query: 365 LLARNG 382 ++ G Sbjct: 235 IVTGKG 240
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 190 bits (482), Expect = 2e-48 Identities = 89/118 (75%), Positives = 98/118 (83%) Frame = +2 Query: 107 GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPET 286 GR +MR WYG DR +LGP S + PSYL+GEFPGDYGWDTAGLSADPET Sbjct: 32 GRFSMRRTVKAVPQSI--WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89 Query: 287 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 FAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 90 FAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGN 147
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 182 bits (462), Expect = 4e-46 Identities = 84/89 (94%), Positives = 86/89 (96%) Frame = +2 Query: 194 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 P SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 374 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN Sbjct: 61 RNGVKFGEAVWFKAGSQIFSEGGLDYLGN 89
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 180 bits (457), Expect = 1e-45 Identities = 93/137 (67%), Positives = 102/137 (74%), Gaps = 1/137 (0%) Frame = +2 Query: 53 ALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGE 232 A +SP +A A+ GRITM WYGPDRV YLGP S + PSYL+GE Sbjct: 27 ASASPLRDIAAAT----NGRITMGNDL---------WYGPDRVKYLGPFSAQTPSYLNGE 73 Query: 233 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWF 409 FPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWF Sbjct: 74 FPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWF 133 Query: 410 KAGSQIFSEGGLDYLGN 460 KAGSQIFSEGGLDYLGN Sbjct: 134 KAGSQIFSEGGLDYLGN 150 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Frame = +2 Query: 176 RVLYLGPLSGEPPSYLSGE------FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 337 +VL +G + G + L G +PG +D GL+ DP TFA+ + E+ + R AM Sbjct: 166 QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225 Query: 338 GALGCVFPELLARNG 382 G ++ G Sbjct: 226 SMFGFFVQAIVTGKG 240
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 173 bits (439), Expect = 2e-43 Identities = 81/101 (80%), Positives = 87/101 (86%), Gaps = 1/101 (0%) Frame = +2 Query: 161 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 340 WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG Sbjct: 47 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106 Query: 341 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ALGC+FPE+L + V F E VWFKAGSQIFS+GGLDYLGN Sbjct: 107 ALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGN 147 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 233 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 382 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 168 bits (425), Expect = 7e-42 Identities = 78/101 (77%), Positives = 88/101 (87%), Gaps = 1/101 (0%) Frame = +2 Query: 161 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 337 +YGP+R +LGP S P+YL+GEFPGDYGWDTAGLSADPETF + RELE+IH RWAML Sbjct: 36 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95 Query: 338 GALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 GALGC PELLA++G KFGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 96 GALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGN 136
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 166 bits (421), Expect = 2e-41 Identities = 78/101 (77%), Positives = 86/101 (85%), Gaps = 1/101 (0%) Frame = +2 Query: 161 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 340 WYGPDR +LGP S P+YL+GEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LG Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98 Query: 341 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ALG + PELL+ GVKFGE VWFKAG+QIFSEGGLDYLG+ Sbjct: 99 ALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGS 139 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +2 Query: 233 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 382 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 164 bits (414), Expect = 1e-40 Identities = 79/95 (83%), Positives = 83/95 (87%) Frame = +2 Query: 176 RVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 355 RV YLGP SGE PSYL+GEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+ Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117 Query: 356 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 FPELL+ G FGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 118 FPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGN 152
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 154 bits (389), Expect = 1e-37 Identities = 71/102 (69%), Positives = 88/102 (86%), Gaps = 2/102 (1%) Frame = +2 Query: 161 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 337 +YGPDR +LGP S + P YL+GEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 338 GALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 GALG + PELL++ GV+FGE VWFKAG+QIF++GGL+YLGN Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGN 134 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 233 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 382 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 125 bits (314), Expect = 5e-29 Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%) Frame = +2 Query: 161 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 340 +YGPD L + P +GEFPGDYGWDTAGLSADPETF + RELE+IH R +LG Sbjct: 57 FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLG 115 Query: 341 ALGCVFPELLA-RNGVKFGE-AVWFKAGSQIFSEGGLDYLGN 460 ALG V PELLA +G+KFG+ A+WFKAG+ IF +GGL+YLGN Sbjct: 116 ALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGN 157 Score = 32.3 bits (72), Expect = 0.59 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +2 Query: 233 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 382 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 102 bits (253), Expect = 6e-22 Identities = 53/103 (51%), Positives = 64/103 (62%), Gaps = 4/103 (3%) Frame = +2 Query: 161 WYGPDRVLYL--GPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 331 WYGPDR ++L G L E P YL+GE GDYG+D GL PE FAK + E+IH RWA Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121 Query: 332 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLG 457 MLGA G + PE L + G G EAVWFK G+ + L+Y G Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFG 164
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 84.7 bits (208), Expect = 1e-16 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%) Frame = +2 Query: 50 MALSSPAMKLAGA------SYVLGGGRITMRXXXXXXXXXXXPWY----GPDRVLYLGPL 199 +A SSP+ + G+ + LGG R+ + PDR L+ Sbjct: 13 VAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP-- 70 Query: 200 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 379 PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + Sbjct: 71 GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKI 130 Query: 380 GVKFGEAVWFKAGSQ 424 G+ W+ AG Q Sbjct: 131 GI-LNTPSWYTAGEQ 144
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 78.6 bits (192), Expect = 7e-15 Identities = 38/85 (44%), Positives = 49/85 (57%) Frame = +2 Query: 170 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 349 PDR L+ PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G Sbjct: 63 PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120 Query: 350 CVFPELLARNGVKFGEAVWFKAGSQ 424 PE L + GV W+ AG Q Sbjct: 121 IFIPEFLTKIGV-LNTPSWYTAGEQ 144
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 73.6 bits (179), Expect = 2e-13 Identities = 34/76 (44%), Positives = 48/76 (63%) Frame = +2 Query: 200 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 379 + EPP+ L+GE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 380 GVKFGEAVWFKAGSQI 427 G+ WF+AG + Sbjct: 250 ----GKGAWFEAGDSV 261 Score = 70.9 bits (172), Expect = 2e-12 Identities = 34/73 (46%), Positives = 45/73 (61%) Frame = +2 Query: 209 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 388 PP YL+GE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 389 FGEAVWFKAGSQI 427 G WF+ ++ Sbjct: 434 -GNGAWFQIWDKV 445 Score = 64.3 bits (155), Expect = 1e-10 Identities = 31/68 (45%), Positives = 45/68 (66%) Frame = +2 Query: 212 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 391 PS+L+GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 392 GEAVWFKA 415 G+ +W++A Sbjct: 65 GKGIWYEA 72
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 67.4 bits (163), Expect = 2e-11 Identities = 30/33 (90%), Positives = 32/33 (96%) Frame = +2 Query: 362 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 460 ELL +NGVKFGEAVWFKAG+QIFSEGGLDYLGN Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGN 33
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 67.0 bits (162), Expect = 2e-11 Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Frame = +2 Query: 197 LSGEP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 373 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL- 108 Query: 374 RNGVKFGEAVWFKAGSQIFSEGG-LDYLG 457 G W KA GG YLG Sbjct: 109 ------GLGNWVKAQEWAAIPGGQATYLG 131
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 66.2 bits (160), Expect = 4e-11 Identities = 29/74 (39%), Positives = 46/74 (62%) Frame = +2 Query: 206 EPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 385 +PP++L+GE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 386 KFGEAVWFKAGSQI 427 G+ WF+ G+ + Sbjct: 222 --GKGAWFEVGNSV 233 Score = 38.5 bits (88), Expect = 0.008 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +2 Query: 278 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 427 P + + R EV + R AML +GCV+PELL G VWF+ +++ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFEVWNKV 43
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 58.5 bits (140), Expect = 8e-09 Identities = 27/71 (38%), Positives = 40/71 (56%) Frame = +2 Query: 212 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 391 P YL+G GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 392 GEAVWFKAGSQ 424 W+ AG + Sbjct: 123 NVPEWYDAGKE 133
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 56.2 bits (134), Expect = 4e-08 Identities = 30/70 (42%), Positives = 38/70 (54%) Frame = +2 Query: 212 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 391 P +L G PGD+G+D GL DP RE E+IH RWAML LG + A G+ Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP- 129 Query: 392 GEAVWFKAGS 421 WF+AG+ Sbjct: 130 ----WFEAGA 135
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 56.2 bits (134), Expect = 4e-08 Identities = 29/70 (41%), Positives = 35/70 (50%) Frame = +2 Query: 212 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 391 P +L G PGDYG+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 392 GEAVWFKAGS 421 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 55.8 bits (133), Expect = 5e-08 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 13/141 (9%) Frame = +2 Query: 35 MAATTMALSSPAMKLAGASYVLGGGRITM---RXXXXXXXXXXXP--WYGPDRVLYLGPL 199 MA + SS A A+ + G RI+ R P G +R L+ Sbjct: 1 MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFA-- 58 Query: 200 SGEPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 361 S + SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + P Sbjct: 59 SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117 Query: 362 ELLARNGVKFGEA--VWFKAG 418 E+L + G+ E WF+ G Sbjct: 118 EILGKAGLIPQETALAWFQTG 138
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/70 (40%), Positives = 35/70 (50%) Frame = +2 Query: 212 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 391 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 392 GEAVWFKAGS 421 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 40.0 bits (92), Expect = 0.003 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +2 Query: 188 LGPLSGEPPSYL-SGEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 361 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 362 ELLARN--GVKFGEAVW 406 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 38.9 bits (89), Expect = 0.006 Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 163 MAA TMALSSP A+KL+ AS + G GRITMR PW Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPW 49
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 38.1 bits (87), Expect = 0.011 Identities = 38/126 (30%), Positives = 43/126 (34%), Gaps = 43/126 (34%) Frame = +2 Query: 209 PPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 298 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 299 -------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 439 RE E+IH RWAMLG LG + E L G+ W AG EG Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL--TGI-----AWQDAGKVELVEG 177 Query: 440 GLDYLG 457 YLG Sbjct: 178 S-SYLG 182 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +2 Query: 179 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 346 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 37.7 bits (86), Expect = 0.014 Identities = 38/125 (30%), Positives = 42/125 (33%), Gaps = 43/125 (34%) Frame = +2 Query: 212 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 298 P YL G GDYG+D GL E AKN Sbjct: 62 PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPF 121 Query: 299 ------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG 442 RE E+IH RWAML LG + E L GV W AG +G Sbjct: 122 QPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGV-----TWQDAGKVELVDGS 174 Query: 443 LDYLG 457 YLG Sbjct: 175 -SYLG 178 Score = 33.9 bits (76), Expect = 0.20 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 179 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 349 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 36.6 bits (83), Expect = 0.031 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 45/108 (41%) Frame = +2 Query: 212 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 298 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 299 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 400 RE E+IH RWAML LG + E A GV + EA Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 35.8 bits (81), Expect = 0.054 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 179 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 349 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255 Score = 35.8 bits (81), Expect = 0.054 Identities = 43/139 (30%), Positives = 49/139 (35%), Gaps = 44/139 (31%) Frame = +2 Query: 173 DRVL-YLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------ 298 DR L Y G +S P +L G GDYG+D GL E AKN Sbjct: 54 DRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVI 110 Query: 299 --------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 400 RE E+IH RWAML LG + E L GV Sbjct: 111 GTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL--TGV----- 163 Query: 401 VWFKAGSQIFSEGGLDYLG 457 W AG +G YLG Sbjct: 164 TWQDAGKVELVDGS-SYLG 181
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 34.7 bits (78), Expect = 0.12 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +2 Query: 35 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 163 MAA MALSSP A+KL+ AS G GRITMR PW Sbjct: 1 MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPW 49
>SYC_XYLFA (Q9PEN3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 467 Score = 33.1 bits (74), Expect = 0.35 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = -1 Query: 448 VEATLAEDLGAGLEPDGLAELDTVASE---QLGEDAAERAEHGPAAMDHLQLTVLGEGL 281 +EA L +DL P LAEL T+A+E QL + A AA+ L+ +LG GL Sbjct: 340 IEAALDDDLNT---PQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGL 395
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 33.1 bits (74), Expect = 0.35 Identities = 24/85 (28%), Positives = 44/85 (51%) Frame = -2 Query: 414 ALNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPG 235 +L + S +L P +SSSG + S P Q+Q ++S++ S S+ + + ++ SP Sbjct: 224 SLATSTSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPN 276 Query: 234 NSPLR*LGGSPESGPR*STRSGPYH 160 N+ R +GG+ S +T + H Sbjct: 277 NNGARSVGGAATSAATGTTAAAGSH 301
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 304 Score = 32.7 bits (73), Expect = 0.45 Identities = 22/55 (40%), Positives = 25/55 (45%) Frame = -1 Query: 415 GLEPDGLAELDTVASEQLGEDAAERAEHGPAAMDHLQLTVLGEGLRVSREPRGVP 251 GL DG+ +L V +L E AAER HG A H V G G R VP Sbjct: 66 GLIADGVCDLGIVGQNELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.0 bits (71), Expect = 0.78 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 4/131 (3%) Frame = -2 Query: 456 PR*SRPPSLKIWEPALNQTASPNLTPLRASSSGKTQPS----APSMAQRQWITSSSRFLA 289 P+ P+ K P+++ P R++ ++ P +PS R TSSS Sbjct: 634 PKQRSSPAAKRRSPSISSKHRKGSPPSRSNRETRSPPQNKRDSPSPRPRASHTSSSPPPL 693 Query: 288 KVSGSAESPAVSQP*SPGNSPLR*LGGSPESGPR*STRSGPYHGXXXXXXXXXXLRMVMR 109 + G++ SP Q SP P+R + +PE P+ + S P Sbjct: 694 R-RGASASPQRRQSPSPSTRPIRRVSRTPE--PKKTKASTPSPRSARRVSSSRSASGSPE 750 Query: 108 PPPRTYEAPAS 76 P P+ ++ P S Sbjct: 751 PAPKKHQGPPS 761
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 32.0 bits (71), Expect = 0.78 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%) Frame = -2 Query: 441 PPSLKIWEPALNQTASPNL-------------TPLRASSSGKTQPSAPSMAQR-QWITSS 304 PP+ K+ EP++ ++A +L TP+ SS +Q ++P A I+SS Sbjct: 318 PPTAKLTEPSVEKSALGSLCKTVSQIGQAQSTTPVTTPSSRPSQLASPPPASNASTISSS 377 Query: 303 SRFLAKVSGSAESPAVSQP*SPGNSPLR*LGGS 205 S A S S+ S S S +SP L G+ Sbjct: 378 SSTAASCSASSSSGCSSAASSLNSSPSSRLAGA 410
>SYC_XYLFT (Q87EL7) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 467 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = -1 Query: 448 VEATLAEDLGAGLEPDGLAELDTVASE---QLGEDAAERAEHGPAAMDHLQLTVLGEGL 281 +EA L +DL P LAEL T+A+E QL + A A+ L+ +LG GL Sbjct: 340 IEAALDDDLNT---PQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGL 395
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 31.2 bits (69), Expect = 1.3 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -2 Query: 414 ALNQTASPNLTP----LRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP 247 A++ T +P +TP + +S PSAP+M+ + +S+S + S PAVSQ Sbjct: 399 AMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ- 457 Query: 246 *SPGNSPLR*LGGSPESGPR 187 G S LG S ES R Sbjct: 458 -GFGQSTTTTLGPSFESNER 476
>FA53C_HUMAN (Q9NYF3) Protein FAM53C| Length = 392 Score = 31.2 bits (69), Expect = 1.3 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 8/93 (8%) Frame = -2 Query: 447 SRPPSLKIWEPALNQTASPNLTPLR-ASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSA 271 S P L W+P S TP++ S G P P + + + SS RFL S S+ Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRV-SSLRFLQAPSASS 180 Query: 270 ESPAVSQP*SP-------GNSPLR*LGGSPESG 193 + +P SP R SP+SG Sbjct: 181 QCAPAHRPYSPPFFSLALAQDSSRPCAASPQSG 213
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 441 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMA 328 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 441 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMA 328 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>RECA_STRVL (P48295) Protein recA (Recombinase A)| Length = 377 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = -1 Query: 460 IAEVVEATLAEDLGAGLEPDGL---AELDTVASEQLGEDAAERAEHGPAA 320 +A+ +E + E LG G+ PD A D A++ G D A ++ PA+ Sbjct: 315 LADEIERKIKEKLGVGVRPDAAKAEAATDAAAADTAGTDDAAKSVPAPAS 364
>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 454 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -3 Query: 332 WPSGNGSPPAHGSWRRSPGQQR 267 WP+ +GSP A GSW SPG++R Sbjct: 312 WPAPSGSPDA-GSWLPSPGRRR 332
>FA53C_PONPY (Q5R815) Protein FAM53C| Length = 392 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = -2 Query: 447 SRPPSLKIWEPALNQTASPNLTPLR-ASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSA 271 S P L W+P S TP++ S G P P + + + SS RFL S S+ Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRV-SSLRFLQAPSASS 180 Query: 270 ESPAVSQP*SP 238 + +P SP Sbjct: 181 QCAPAHRPYSP 191
>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid| hormone receptor-associated protein complex 240 kDa component-like) Length = 2207 Score = 30.0 bits (66), Expect = 2.9 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = -2 Query: 441 PPSLKIWEPALNQTASPNLTPLRASSS--GKTQPSAPSMAQRQWITSSSRFLAKVSGSAE 268 PP+ + P + +A+P + ASS G + SAP + Q TSSS F V G Sbjct: 1556 PPAGSAFNPTSSSSANPTTSSSSASSGPPGSSAASAPGITQMN-TTSSSGFGGGVGGQNP 1614 Query: 267 SP-AVSQP*SPGN 232 S S +PGN Sbjct: 1615 SAGGSSTDRTPGN 1627
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 6/36 (16%) Frame = +2 Query: 35 MAATTMALSSPA-----MKLA-GASYVLGGGRITMR 124 MAA+TMALSS +KLA +S + G GRITMR Sbjct: 1 MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMR 36
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.0 bits (66), Expect = 2.9 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 328 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184 Query: 329 AMLGALGC---VFP-----ELLARNGVKFGEAVW 406 A + G V P ++ G++ G+ +W Sbjct: 185 AGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Frame = -2 Query: 420 EPALNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*S 241 +P Q +P +S + + QP+ P A T++ R L + S E+ + S Sbjct: 232 KPLPQQPPAPANQDQNSSQNARLQPTPPIQAPAPKPTAAPRPLDRESPGVENKLIPPVGS 291 Query: 240 PGNS-PLR*LGGSPESGP 190 PG+S PL G P S P Sbjct: 292 PGSSTPLPPDGTGPNSTP 309
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +2 Query: 281 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG-----GL 445 ET +K R+++ I C ++ +L +F E++ NG F + +G + F+ GL Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKEFARRFALTFGL 961 Query: 446 DYL 454 D L Sbjct: 962 DQL 964
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.6 bits (65), Expect = 3.8 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 328 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184 Query: 329 A---MLGALGCVFP-----ELLARNGVKFGEAVW 406 A + G V P ++ G++ G+ +W Sbjct: 185 AGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.6 bits (65), Expect = 3.8 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 328 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184 Query: 329 A---MLGALGCVFP-----ELLARNGVKFGEAVW 406 A + G V P ++ G++ G+ +W Sbjct: 185 AGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 5.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 281 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 391 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)| (Lymphocyte antigen 64) Length = 573 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 Query: 369 SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS 229 SSSG T P +Q +S + SG A P Q SPG+S Sbjct: 27 SSSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSS 73
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed| Length = 552 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/69 (33%), Positives = 33/69 (47%) Frame = -2 Query: 411 LNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 232 + Q A+P +T SSS + S P + I+S+S +A S S+ S S S + Sbjct: 306 IGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSS-VATSSSSSSSGCSSAASSLNS 364 Query: 231 SPLR*LGGS 205 SP LG S Sbjct: 365 SPSSRLGAS 373
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 325 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 325 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 325 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 29.3 bits (64), Expect = 5.0 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = -2 Query: 417 PALNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SP 238 P QT+SP P+R +S Q RQ + S+R + +VS + E + + SP Sbjct: 707 PRAPQTSSP--PPVRRGASASPQG-------RQSPSPSTRPIRRVSRTPEPKKIKKAASP 757 Query: 237 GNSPLR*LGGSPE 199 P+R + +PE Sbjct: 758 STRPIRRVSRTPE 770
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 423 WEPALNQTASPNL--TPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQ 250 W N +A+P+L T + A SS +T P A R + SR + + + E+P Sbjct: 405 WNRLRNSSAAPSLLTTSVTADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTVS 464 Query: 249 P 247 P Sbjct: 465 P 465
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 29.3 bits (64), Expect = 5.0 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Frame = -2 Query: 411 LNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 232 L+ +P L + + SAP+ Q + S+S+ L ++ S+ SP+ +P +P Sbjct: 1325 LSSPEAPEAPSLAPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLL 1384 Query: 231 SPLR*LGG----SPES-GPR*S-TRSGPYHG 157 P LG SPE+ GPR + + +HG Sbjct: 1385 YPQMALGTSSAISPETDGPRVTEPEAASFHG 1415
>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)| Length = 335 Score = 29.3 bits (64), Expect = 5.0 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFP----------GDYGWDTAGLSADPETFAKNREL 307 P+YGP VLY G S L EFP G G + S D F+ +R Sbjct: 56 PYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRSC 110 Query: 308 EVIHCRWAMLGALGCV----FPELL 370 E +H + L L V FP++L Sbjct: 111 ERLHTTYLDLVYLHDVEFVKFPDIL 135
>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 452 Score = 29.3 bits (64), Expect = 5.0 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -3 Query: 332 WPSGNGSPPAHGSWRRSPGQQR 267 WP+ +G+P A GSW SPG++R Sbjct: 310 WPAPSGAPDA-GSWLPSPGRRR 330
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 325 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 180
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 28.9 bits (63), Expect = 6.6 Identities = 21/66 (31%), Positives = 38/66 (57%) Frame = -2 Query: 447 SRPPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAE 268 SR PS + + +++ S ++TP R +S+G+ +PS + + I S SR A + G + Sbjct: 671 SRSPSPR--RRSYSRSRSRSVTPRRTNSNGRNNARSPSRSVSRSI-SRSRSPAPIRGRSY 727 Query: 267 SPAVSQ 250 S +VS+ Sbjct: 728 SRSVSR 733
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 28.9 bits (63), Expect = 6.6 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 11/94 (11%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 328 PW+G ++ L G P + S FPG G G+ AD A R++ H C + Sbjct: 158 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 214 Query: 329 AMLGALGCVFPELLAR--------NGVKFGEAVW 406 A + G + A+ G++ G+ +W Sbjct: 215 AGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
>YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicase in ATS1-TPD3| intergenic region (EC 3.6.1.-) Length = 1131 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -2 Query: 384 TPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSP 226 +P + +SS +P++P++ + SRF K S +E S+P P SP Sbjct: 20 SPTKVASSSPLKPTSPTVPDASVASLRSRFTFKPSDPSEGAHTSKP-LPSGSP 71
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 224 SGEFPGDYGWDTAGLSADPET--FAKNRELEVIHCRWAMLGALGCVFPELL 370 SG F G WD L+A + RE E+ H R AML ALG V E L Sbjct: 67 SGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 325 PW+G ++ L G P + S FPG G G+ AD A R++ H R Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 181
>SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit (Sodium| channel protein type V alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.5) (Sodium channel protein, cardiac muscle alpha-subunit) (HH1) Length = 2016 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Frame = -1 Query: 373 SEQLGEDAAERA--EHGPAAMDHLQLTVLGEGL-RVSREPR 260 +E+ GED ++ E GP AM+HL LT GL R S +PR Sbjct: 486 TEECGEDRLPKSDSEDGPRAMNHLSLT---RGLSRTSMKPR 523
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington| disease gene regulatory region-binding protein 1) (HDBP-1) Length = 387 Score = 28.9 bits (63), Expect = 6.6 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 209 PPSYLSGEFPGDYGWDTAGLSADPET 286 P SY S GD+GWD A + P T Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170
>TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) (Lysosomal pepstatin insensitive protease) (LPIC) Length = 563 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -2 Query: 402 TASPNLTPLRA-SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAV 256 ++SP+L P ++SG+ P +++ W+ S+S + VSG++ S V Sbjct: 431 SSSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNSVPIPWVSGTSASTPV 480
>CIC_HUMAN (Q96RK0) Protein capicua homolog| Length = 1608 Score = 28.5 bits (62), Expect = 8.6 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 2/129 (1%) Frame = -2 Query: 441 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESP 262 PP + W P +SP L P + +T P ++ +SSS + G Sbjct: 1233 PPLPETWTPTAR--SSPPLPP---PAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRG 1287 Query: 261 AVSQP*SPGNSPLR*LGGSPESGPR*STRSGPYHGXXXXXXXXXXLRMVMRPPP--RTYE 88 P SP +P GGS ES + P ++ +RPPP +T++ Sbjct: 1288 EPPTPPSPAPAPAVAPGGSSESSSGRAAGDTP----ERKEAAGTGKKVKVRPPPLKKTFD 1343 Query: 87 APASFIAGE 61 + + + E Sbjct: 1344 SVDNRVLSE 1352
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)| Length = 717 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 402 TASPNLTPLRASSSGKTQPSAPSMAQRQWITSSS 301 +ASP+ +PL SS + S+ S +Q + TSSS Sbjct: 490 SASPSYSPLSVDSSNVSSSSSSSSSQSSFTTSSS 523
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +2 Query: 158 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 277 PW+G ++ L ++G P + FPG G G+ AD Sbjct: 129 PWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 28.5 bits (62), Expect = 8.6 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 2/105 (1%) Frame = -2 Query: 405 QTASPNLTPLRASSSGKTQ--PSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 232 + A+P P +++ Q P AP+ +++R A G + PA QP PG Sbjct: 103 EAAAPPAQPGGTATTPAAQATPEAPARPG----PAAARPSAPAPGQPKPPAPGQPPRPGA 158 Query: 231 SPLR*LGGSPESGPR*STRSGPYHGXXXXXXXXXXLRMVMRPPPR 97 +P G P P+ + R+ P G R + RP PR Sbjct: 159 TP----GPRPGPAPKPAART-PRVGNNPFSSAQPVDRPIPRPVPR 198
>SYFB_SYNPX (Q7U6V9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 814 Score = 28.5 bits (62), Expect = 8.6 Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = -1 Query: 427 DLGAGLEPDGLAELDTVASEQLGEDAAERAEHGPAAMDHLQLTVLGEGLRVSREPRGVPA 248 +LG E DG+AELD + E A A M L TVL + +R P G+ Sbjct: 125 ELGLATESDGIAELDALTDELPALGAP------VAPMLGLDDTVLELAITANR-PDGLSM 177 Query: 247 V-IARELAA 224 V IARE+AA Sbjct: 178 VGIAREVAA 186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,387,592 Number of Sequences: 219361 Number of extensions: 926857 Number of successful extensions: 4166 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 3902 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4103 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
