ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet24e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY442329.1| Triticum aestivum phytochelatin synthetase mRNA, ... 343 2e-91
2gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 p... 311 7e-82
3gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like pro... 54 3e-04
4emb|AJ011617.1|ZMA011617 Zea mays mRNA for SBP-domain protein 4 50 0.004
5ref|NM_197178.1| Oryza sativa (japonica cultivar-group) putative... 46 0.067
6gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.067
7emb|AL136234.12| Human DNA sequence from clone RP5-933B4 on chro... 46 0.067
8gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 gen... 46 0.067
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
11dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene f... 46 0.067
12dbj|AK102632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.067
13dbj|AK071225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.067
14dbj|AK070472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.067
15dbj|AK060897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.067
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.067
17ref|NM_194842.1| Oryza sativa (japonica cultivar-group) putative... 44 0.26
18gb|AC113475.12| Mus musculus chromosome 12, clone RP23-304B1, co... 44 0.26
19gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, c... 44 0.26
20gb|AC155845.3| Mus musculus 6 BAC RP24-399D24 (Roswell Park Canc... 44 0.26
21gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
22gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
23gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, comp... 42 1.0
24gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome... 42 1.0
25gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, comple... 42 1.0
26gb|AC163391.4| Mus musculus chromosome 3, clone RP23-173N16, com... 42 1.0
27gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosom... 42 1.0
28gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105... 42 1.0
29gb|AC160936.2| Mus musculus BAC clone RP23-300E17 from chromosom... 42 1.0
30dbj|AB228304.1| Aspergillus oryzae cDNA, contig sequence: AoEST5177 42 1.0
31dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 42 1.0
32gb|AC159823.2| Mus musculus BAC clone RP23-113F14 from chromosom... 42 1.0
33gb|AC159274.2| Mus musculus BAC clone RP23-405C6 from chromosome... 42 1.0
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
37gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, r... 42 1.0
38gb|AC102600.11| Mus musculus chromosome 3, clone RP23-376E16, co... 42 1.0
39gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosom... 42 1.0
40gb|AC008738.7| Homo sapiens chromosome 19 clone CTD-2540B15, com... 42 1.0
41dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
42dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
43dbj|AK068090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
44gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70... 42 1.0
45gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, co... 42 1.0
46gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
47gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosom... 42 1.0
48gb|AC116792.17| Mus musculus chromosome 6, clone RP24-304O23, co... 40 4.1
49gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 40 4.1
50gb|BC073542.1| Xenopus laevis MGC82812 protein, mRNA (cDNA clone... 40 4.1
51gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.1
52gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 4.1
53gb|AC118033.7| Mus musculus chromosome 14, clone RP23-472J4, com... 40 4.1
54gb|AC115737.9| Mus musculus chromosome 3, clone RP23-473G18, com... 40 4.1
55emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in... 40 4.1
56emb|BX013967.1|CNS08IXV Single read from an extremity of a full-... 40 4.1
57gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, comp... 40 4.1
58gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosom... 40 4.1
59emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chr... 40 4.1
60emb|CR392330.9| Zebrafish DNA sequence from clone CH211-282J17 i... 40 4.1
61gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.1
62emb|AL954375.6| Mouse DNA sequence from clone RP23-16F14 on chro... 40 4.1
63gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 4.1
64dbj|AK144767.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 4.1
65gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer... 40 4.1
66gb|AF283286.1|AF283286 Ralstonia solanacearum flagellar motor sw... 40 4.1
67dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
68dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
69dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.1
70gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.1
71gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
72dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
73emb|AL928771.6| Mouse DNA sequence from clone RP23-45J15 on chro... 40 4.1
74dbj|BS000131.1| Pan troglodytes chromosome 22 clone:PTB-315N10, ... 40 4.1
75dbj|AP001745.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.1
76gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, comp... 40 4.1
77emb|AL954355.10| Mouse DNA sequence from clone RP23-94F6 on chro... 40 4.1
78emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, co... 40 4.1
79emb|CT010444.10| Mouse DNA sequence from clone RP23-151L20 on ch... 40 4.1
80gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, comple... 40 4.1
81dbj|AP001619.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 4.1
82emb|AL135758.32| Mouse DNA sequence from clone RP21-117J5 on chr... 40 4.1 
>gb|AY442329.1| Triticum aestivum phytochelatin synthetase mRNA, complete cds
          Length = 1571

 Score =  343 bits (173), Expect = 2e-91
 Identities = 236/255 (92%), Gaps = 9/255 (3%)
 Strand = Plus / Plus

                                                                       
Query: 68  ccgcacatgctttaagtcccactcccacc------accaccacctgctcagtcgccgcag 121
           |||||||||||||||||||||||||| ||      ||||||||||||||||||||| |||
Sbjct: 1   ccgcacatgctttaagtcccactccctcctcctccaccaccacctgctcagtcgcctcag 60

                                                                       
Query: 122 atctccagctccccccatcatcggcgggcgcggccgcattcctcgccgtacggagcgaag 181
           |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 61  atctccagctccccccttcatcggcgggcgcggccgcattcctcgccgtacagagcggag 120

                                                                       
Query: 182 cggggatcggtgggtgggtaggtgcggctgctggggagtgtcggtggggtagc-gcggg- 239
           ||||||||||||||||||||||||||||||| || |||||||||||| | ||| ||||| 
Sbjct: 121 cggggatcggtgggtgggtaggtgcggctgcgggagagtgtcggtggaggagcagcgggg 180

                                                                       
Query: 240 -aggaaaaatggcgccggttggtggcgtcgccgggggctccagatccgcggcctgctgcg 298
            |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 caggaaaaatggcgccggttggtggcgtcgccgggagctccagatccgcggcctgctgcg 240

                          
Query: 299 ccgtgctgctcgcgg 313
           |||||||||||||||
Sbjct: 241 ccgtgctgctcgcgg 255
to top
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin
           synthetase-like protein (PCS-a) pseudogene, complete
           sequence
          Length = 5106

 Score =  311 bits (157), Expect = 7e-82
 Identities = 216/234 (92%), Gaps = 5/234 (2%)
 Strand = Plus / Plus

                                                                       
Query: 76  gctttaagtcccactcccaccaccaccacctgctcagtcgccgcagatctccagctcccc 135
           |||| |||||||||||   || |||||||||||||||||||| |||||||||||||||||
Sbjct: 506 gcttcaagtcccactc---cctccaccacctgctcagtcgcctcagatctccagctcccc 562

                                                                       
Query: 136 ccatcatcggcgggcgcggccgcattcctcgccgtacggagcgaagcggggatcggtggg 195
           ||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 563 cctccatcggcgggcgcggccgcattcctcgccgtacagagcgaagcggggatcggtggg 622

                                                                       
Query: 196 tgggtaggtgcggctgctggggagtgtcggtggggtagcgcgggaggaaaaatggcgccg 255
           ||||||||||| |||||||| |||||||||||| ||||||  |||||  |||||||||||
Sbjct: 623 tgggtaggtgcagctgctggagagtgtcggtggagtagcggtggagg--aaatggcgccg 680

                                                                 
Query: 256 gttggtggcgtcgccgggggctccagatccgcggcctgctgcgccgtgctgctc 309
           ||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 gttagtggcgtcgccgggagctccagatccgcggcctgctgcgccgtgctgctc 734
to top
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1,
            phytochelatin synthetase-like protein 2, and cytochrome
            b5 (Cyb5) genes, complete cds; and MADS box protein AGLG1
            (Aglg1) gene, partial cds
          Length = 23102

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 67   gccgcacatgctttaagtcccactccc 93
            |||||||||||||||||||||||||||
Sbjct: 8798 gccgcacatgctttaagtcccactccc 8824
to top
>emb|AJ011617.1|ZMA011617 Zea mays mRNA for SBP-domain protein 4
          Length = 1975

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 83  gtcccactcccaccaccaccacctgctca 111
           ||||||||||||||||||||| |||||||
Sbjct: 359 gtcccactcccaccaccaccagctgctca 387
to top
>ref|NM_197178.1| Oryza sativa (japonica cultivar-group) putative phytochelatin
           synthetase (OSJNBa0017E08.5), mRNA
          Length = 1278

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 291 ctgctgcgccgtgctgctcgcgg 313
           |||||||||||||||||||||||
Sbjct: 21  ctgctgcgccgtgctgctcgcgg 43
to top
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0073E05, complete sequence
          Length = 178013

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 291   ctgctgcgccgtgctgctcgcgg 313
             |||||||||||||||||||||||
Sbjct: 53378 ctgctgcgccgtgctgctcgcgg 53356
to top
>emb|AL136234.12| Human DNA sequence from clone RP5-933B4 on chromosome 1p22.3-31.1
             Contains a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 119481

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 208   gctgctggggagtgtcggtgggg 230
             |||||||||||||||||||||||
Sbjct: 89535 gctgctggggagtgtcggtgggg 89557
to top
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete
             sequence
          Length = 136120

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 291   ctgctgcgccgtgctgctcgcgg 313
             |||||||||||||||||||||||
Sbjct: 46578 ctgctgcgccgtgctgctcgcgg 46556
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 291      ctgctgcgccgtgctgctcgcgg 313
                |||||||||||||||||||||||
Sbjct: 18460115 ctgctgcgccgtgctgctcgcgg 18460137



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 85      cccactcccaccaccaccacct 106
               ||||||||||||||||||||||
Sbjct: 2816554 cccactcccaccaccaccacct 2816575
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 291      ctgctgcgccgtgctgctcgcgg 313
                |||||||||||||||||||||||
Sbjct: 18580263 ctgctgcgccgtgctgctcgcgg 18580241
to top
>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer,
             PPR794, PPR683, PPR762 genes for hypothetical protein,
             complete cds
          Length = 76363

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 291   ctgctgcgccgtgctgctcgcgg 313
             |||||||||||||||||||||||
Sbjct: 75162 ctgctgcgccgtgctgctcgcgg 75184
to top
>dbj|AK102632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099L21, full
           insert sequence
          Length = 894

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 291 ctgctgcgccgtgctgctcgcgg 313
           |||||||||||||||||||||||
Sbjct: 87  ctgctgcgccgtgctgctcgcgg 109
to top
>dbj|AK071225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087K13, full
           insert sequence
          Length = 1574

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 291 ctgctgcgccgtgctgctcgcgg 313
           |||||||||||||||||||||||
Sbjct: 91  ctgctgcgccgtgctgctcgcgg 113
to top
>dbj|AK070472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D22, full
           insert sequence
          Length = 2028

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 291 ctgctgcgccgtgctgctcgcgg 313
           |||||||||||||||||||||||
Sbjct: 307 ctgctgcgccgtgctgctcgcgg 329
to top
>dbj|AK060897.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D01, full
           insert sequence
          Length = 1765

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 291 ctgctgcgccgtgctgctcgcgg 313
           |||||||||||||||||||||||
Sbjct: 230 ctgctgcgccgtgctgctcgcgg 252
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 291      ctgctgcgccgtgctgctcgcgg 313
                |||||||||||||||||||||||
Sbjct: 18470168 ctgctgcgccgtgctgctcgcgg 18470190



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 85      cccactcccaccaccaccacct 106
               ||||||||||||||||||||||
Sbjct: 2816505 cccactcccaccaccaccacct 2816526
to top
>ref|NM_194842.1| Oryza sativa (japonica cultivar-group) putative salt-inducible
           protein (OSJNBa0030B02.16), mRNA
          Length = 2565

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  cccactcccaccaccaccacct 106
           ||||||||||||||||||||||
Sbjct: 164 cccactcccaccaccaccacct 185
to top
>gb|AC113475.12| Mus musculus chromosome 12, clone RP23-304B1, complete sequence
          Length = 177032

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 178   gaagcggggatcggtgggtgggtagg 203
             ||||| ||||||||||||||||||||
Sbjct: 80545 gaagcagggatcggtgggtgggtagg 80570
to top
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence
          Length = 146836

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 85     cccactcccaccaccaccacct 106
              ||||||||||||||||||||||
Sbjct: 143330 cccactcccaccaccaccacct 143351
to top
>gb|AC155845.3| Mus musculus 6 BAC RP24-399D24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 145877

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 84     tcccactcccaccaccaccacc 105
              ||||||||||||||||||||||
Sbjct: 107490 tcccactcccaccaccaccacc 107469
to top
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057M18 map near E10005S, complete sequence
          Length = 140920

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    tcccactcccaccaccaccac 104
             |||||||||||||||||||||
Sbjct: 30577 tcccactcccaccaccaccac 30557
to top
>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03
             map S20262S, complete sequence
          Length = 149553

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    tcccactcccaccaccaccac 104
             |||||||||||||||||||||
Sbjct: 79048 tcccactcccaccaccaccac 79068
to top
>gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, complete sequence
          Length = 208458

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 85     cccactcccaccaccaccacctgct 109
              |||||||||||||||||||| ||||
Sbjct: 112415 cccactcccaccaccaccacttgct 112439
to top
>gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome 8, complete
            sequence
          Length = 184855

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 85   cccactcccaccaccaccacc 105
            |||||||||||||||||||||
Sbjct: 9562 cccactcccaccaccaccacc 9542
to top
>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence
          Length = 221920

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 187865 cccactcccaccaccaccacc 187845
to top
>gb|AC163391.4| Mus musculus chromosome 3, clone RP23-173N16, complete sequence
          Length = 187855

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 80     taagtcccactcccaccaccaccac 104
              ||||||||||| |||||||||||||
Sbjct: 166735 taagtcccactaccaccaccaccac 166711
to top
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence
          Length = 190693

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 100090 cccactcccaccaccaccacc 100070
to top
>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence
          Length = 222520

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 180338 cccactcccaccaccaccacc 180318
to top
>gb|AC160936.2| Mus musculus BAC clone RP23-300E17 from chromosome 12, complete sequence
          Length = 198897

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 125151 cccactcccaccaccaccacc 125131
to top
>dbj|AB228304.1| Aspergillus oryzae cDNA, contig sequence: AoEST5177
          Length = 489

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 280 agatccgcggcctgctgcgcc 300
           |||||||||||||||||||||
Sbjct: 147 agatccgcggcctgctgcgcc 127
to top
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 280     agatccgcggcctgctgcgcc 300
               |||||||||||||||||||||
Sbjct: 1071135 agatccgcggcctgctgcgcc 1071155
to top
>gb|AC159823.2| Mus musculus BAC clone RP23-113F14 from chromosome 12, complete sequence
          Length = 212532

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 77     ctttaagtcccactcccaccaccaccacc 105
              ||||||||| |||| ||||||||||||||
Sbjct: 190615 ctttaagtcacactaccaccaccaccacc 190643
to top
>gb|AC159274.2| Mus musculus BAC clone RP23-405C6 from chromosome 12, complete sequence
          Length = 200974

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 77    ctttaagtcccactcccaccaccaccacc 105
             ||||||||| |||| ||||||||||||||
Sbjct: 50692 ctttaagtcacactaccaccaccaccacc 50720
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 84       tcccactcccaccaccaccac 104
                |||||||||||||||||||||
Sbjct: 13671937 tcccactcccaccaccaccac 13671917



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 84       tcccactcccaccaccaccac 104
                |||||||||||||||||||||
Sbjct: 13362695 tcccactcccaccaccaccac 13362715
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 86       ccactcccaccaccaccacct 106
                |||||||||||||||||||||
Sbjct: 28574843 ccactcccaccaccaccacct 28574863
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 83       gtcccactcccaccaccacca 103
                |||||||||||||||||||||
Sbjct: 27950756 gtcccactcccaccaccacca 27950776



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      tcccactcccaccaccacca 103
               ||||||||||||||||||||
Sbjct: 5528386 tcccactcccaccaccacca 5528405
to top
>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
              BACR04P18, complete sequence
          Length = 159455

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 106041 cccactcccaccaccaccacc 106061
to top
>gb|AC102600.11| Mus musculus chromosome 3, clone RP23-376E16, complete sequence
          Length = 131703

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 80    taagtcccactcccaccaccaccac 104
             ||||||||||| |||||||||||||
Sbjct: 16190 taagtcccactaccaccaccaccac 16166
to top
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete
             sequence
          Length = 182748

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    cccactcccaccaccaccacc 105
             |||||||||||||||||||||
Sbjct: 45245 cccactcccaccaccaccacc 45225
to top
>gb|AC008738.7| Homo sapiens chromosome 19 clone CTD-2540B15, complete sequence
          Length = 219821

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    ccactcccaccaccaccacct 106
             |||||||||||||||||||||
Sbjct: 93035 ccactcccaccaccaccacct 93055
to top
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144G04
          Length = 194459

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 83     gtcccactcccaccaccacca 103
              |||||||||||||||||||||
Sbjct: 137437 gtcccactcccaccaccacca 137457
to top
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    ccactcccaccaccaccacct 106
             |||||||||||||||||||||
Sbjct: 66321 ccactcccaccaccaccacct 66341
to top
>dbj|AK068090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132N13, full
           insert sequence
          Length = 1354

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tcccactcccaccaccaccac 104
           |||||||||||||||||||||
Sbjct: 65  tcccactcccaccaccaccac 85
to top
>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete
              sequence
          Length = 298827

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 205442 cccactcccaccaccaccacc 205462
to top
>gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, complete sequence
          Length = 191903

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 162200 cccactcccaccaccaccacc 162220
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 84       tcccactcccaccaccaccac 104
                |||||||||||||||||||||
Sbjct: 13753935 tcccactcccaccaccaccac 13753915



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 84       tcccactcccaccaccaccac 104
                |||||||||||||||||||||
Sbjct: 13442874 tcccactcccaccaccaccac 13442894
to top
>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence
          Length = 160884

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     cccactcccaccaccaccacc 105
              |||||||||||||||||||||
Sbjct: 113551 cccactcccaccaccaccacc 113531
to top
>gb|AC116792.17| Mus musculus chromosome 6, clone RP24-304O23, complete sequence
          Length = 155145

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccactcccaccaccaccacc 105
             ||||||||||||||||||||
Sbjct: 79238 ccactcccaccaccaccacc 79219
to top
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     ccactcccaccaccaccacc 105
              ||||||||||||||||||||
Sbjct: 115400 ccactcccaccaccaccacc 115381
to top
>gb|BC073542.1| Xenopus laevis MGC82812 protein, mRNA (cDNA clone MGC:82812
           IMAGE:5506099), complete cds
          Length = 1353

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  ccactcccaccaccaccacc 105
           ||||||||||||||||||||
Sbjct: 848 ccactcccaccaccaccacc 867
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       ccactcccaccaccaccacc 105
                ||||||||||||||||||||
Sbjct: 12929277 ccactcccaccaccaccacc 12929296
to top
>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete
             sequence
          Length = 203967

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ccactcccaccaccaccacc 105
             ||||||||||||||||||||
Sbjct: 64474 ccactcccaccaccaccacc 64493
to top
>gb|AC118033.7| Mus musculus chromosome 14, clone RP23-472J4, complete sequence
          Length = 178111

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     ccaccaccaccacctgctca 111
              ||||||||||||||||||||
Sbjct: 159589 ccaccaccaccacctgctca 159608
to top
>gb|AC115737.9| Mus musculus chromosome 3, clone RP23-473G18, complete sequence
          Length = 179034

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     ccactcccaccaccaccacc 105
              ||||||||||||||||||||
Sbjct: 151809 ccactcccaccaccaccacc 151828
to top
>emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in linkage group 19,
             complete sequence
          Length = 237649

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   cgccgcagatctccagctcc 133
             ||||||||||||||||||||
Sbjct: 44055 cgccgcagatctccagctcc 44074
to top
>emb|BX013967.1|CNS08IXV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA20DH10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1003

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  ccactcccaccaccaccacc 105
           ||||||||||||||||||||
Sbjct: 358 ccactcccaccaccaccacc 377
to top
>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence
          Length = 174676

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   ccactcccaccaccaccacc 105
            ||||||||||||||||||||
Sbjct: 5435 ccactcccaccaccaccacc 5454
to top
>gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosome 14, complete
             sequence
          Length = 223037

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ccactcccaccaccaccacc 105
             ||||||||||||||||||||
Sbjct: 30294 ccactcccaccaccaccacc 30313
to top
>emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chromosome 11 Contains an H+
              transporting, mitochondria ATP synthase F0 complex subunit
              g (Atp5l) pseudogene, the Peli1 gene for pellino 1, a novel
              pseudogene, a ribosomal protein large P0 (Rplp0)
              pseudogene, the Vps54 gene for vacuolar protein sorting 54
              (yeast), a acyl-Coenzyme A dehydrogenase family (Acad)
              pseudogene and two CpG islands, complete sequence
          Length = 206768

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     cccaccaccaccacctgctc 110
              ||||||||||||||||||||
Sbjct: 175238 cccaccaccaccacctgctc 175219
to top
>emb|CR392330.9| Zebrafish DNA sequence from clone CH211-282J17 in linkage group 20
              Contains eight genes for novel lectin C-type domain
              containing protein, complete sequence
          Length = 136773

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    cgccgcagatctccagctcc 133
              ||||||||||||||||||||
Sbjct: 103641 cgccgcagatctccagctcc 103622
to top
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0094H06, from chromosome 3, complete sequence
          Length = 118075

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccactcccaccaccaccacc 105
             ||||||||||||||||||||
Sbjct: 10232 ccactcccaccaccaccacc 10213
to top
>emb|AL954375.6| Mouse DNA sequence from clone RP23-16F14 on chromosome 2, complete
             sequence
          Length = 172487

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    tcccactcccaccaccacca 103
             ||||||||||||||||||||
Sbjct: 16155 tcccactcccaccaccacca 16174
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 280     agatccgcggcctgctgcgc 299
               ||||||||||||||||||||
Sbjct: 1073236 agatccgcggcctgctgcgc 1073255
to top
>dbj|AK144767.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730031F23 product:unclassifiable, full
            insert sequence
          Length = 1749

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   tcccactcccaccaccacca 103
            ||||||||||||||||||||
Sbjct: 1050 tcccactcccaccaccacca 1069
to top
>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 240079

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     ccactcccaccaccaccacc 105
              ||||||||||||||||||||
Sbjct: 147119 ccactcccaccaccaccacc 147100
to top
>gb|AF283286.1|AF283286 Ralstonia solanacearum flagellar motor switch (fliM) gene, complete
            cds
          Length = 1400

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  tcatcggcgggcgcggccgc 158
            ||||||||||||||||||||
Sbjct: 1362 tcatcggcgggcgcggccgc 1343
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 86       ccactcccaccaccaccacc 105
                ||||||||||||||||||||
Sbjct: 21769380 ccactcccaccaccaccacc 21769361
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       ccactcccaccaccaccacc 105
                ||||||||||||||||||||
Sbjct: 12926040 ccactcccaccaccaccacc 12926059
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    ccagatccgcggcctgctgc 297
              ||||||||||||||||||||
Sbjct: 352941 ccagatccgcggcctgctgc 352960
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 293     gctgcgccgtgctgctcgcg 312
               ||||||||||||||||||||
Sbjct: 3761352 gctgcgccgtgctgctcgcg 3761333
to top
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0006D11, complete sequence
          Length = 176637

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   ccactcccaccaccaccacc 105
            ||||||||||||||||||||
Sbjct: 6975 ccactcccaccaccaccacc 6994
to top
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1015E06
          Length = 164583

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     tcccactcccaccaccacca 103
              ||||||||||||||||||||
Sbjct: 125226 tcccactcccaccaccacca 125245
to top
>emb|AL928771.6| Mouse DNA sequence from clone RP23-45J15 on chromosome 4, complete
             sequence
          Length = 133159

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tcccaccaccaccacctgct 109
             ||||||||||||||||||||
Sbjct: 41474 tcccaccaccaccacctgct 41493
to top
>dbj|BS000131.1| Pan troglodytes chromosome 22 clone:PTB-315N10, map 22, complete
             sequences
          Length = 138403

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cccactcccaccaccaccac 104
             ||||||||||||||||||||
Sbjct: 43711 cccactcccaccaccaccac 43730
to top
>dbj|AP001745.1| Homo sapiens genomic DNA, chromosome 21q, section 89/105
          Length = 336578

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cccactcccaccaccaccac 104
             ||||||||||||||||||||
Sbjct: 50447 cccactcccaccaccaccac 50466
to top
>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence
          Length = 209209

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    ccaccaccacctgctcagtc 114
             ||||||||||||||||||||
Sbjct: 79472 ccaccaccacctgctcagtc 79491
to top
>emb|AL954355.10| Mouse DNA sequence from clone RP23-94F6 on chromosome X, complete
             sequence
          Length = 133265

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tcccactcccaccaccacca 103
             ||||||||||||||||||||
Sbjct: 59715 tcccactcccaccaccacca 59696
to top
>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence
          Length = 203360

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    cgccgcagatctccagctcc 133
              ||||||||||||||||||||
Sbjct: 104777 cgccgcagatctccagctcc 104796
to top
>emb|CT010444.10| Mouse DNA sequence from clone RP23-151L20 on chromosome 12, complete
             sequence
          Length = 198654

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ccactcccaccaccaccacc 105
             ||||||||||||||||||||
Sbjct: 58789 ccactcccaccaccaccacc 58808
to top
>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence
          Length = 210088

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     ccactcccaccaccaccacc 105
              ||||||||||||||||||||
Sbjct: 168358 ccactcccaccaccaccacc 168377
to top
>dbj|AP001619.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1016E7, MX1-D21S171
             region, complete sequence
          Length = 161226

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cccactcccaccaccaccac 104
             ||||||||||||||||||||
Sbjct: 25520 cccactcccaccaccaccac 25539
to top
>emb|AL135758.32| Mouse DNA sequence from clone RP21-117J5 on chromosome 5, complete
              sequence
          Length = 142667

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     tcccactcccaccaccacca 103
              ||||||||||||||||||||
Sbjct: 102680 tcccactcccaccaccacca 102661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,941,138
Number of Sequences: 3902068
Number of extensions: 2941138
Number of successful extensions: 178781
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 176949
Number of HSP's gapped (non-prelim): 1830
length of query: 313
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 291
effective length of database: 17,147,199,772
effective search space: 4989835133652
effective search space used: 4989835133652
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top