| Clone Name | baet24e03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK111547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D16, full insert sequence Length = 1840 Score = 414 bits (209), Expect = e-113 Identities = 362/413 (87%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggttatgggat 61 |||| ||| ||||| ||||| || || ||| |||||| || |||||||| || |||||| Sbjct: 890 catagtgatcaaacaatactaagctcgtgctctgatatgggaggagtaagattgtgggat 949 Query: 62 gtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgttactagtgcagaa 121 ||||||| || ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 950 gtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagcgcagaa 1009 Query: 122 gtaagccaggatggcaggttcatcaccacagctgatggctcaagtgtaaaattttgggat 181 ||||| || || ||||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 1010 gtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattttgggat 1069 Query: 182 gctaatcactttgggcttgttaaaagctatgatatgtcgtttactgtggagtcagcttca 241 |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 1070 gctaatcactttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttcc 1129 Query: 242 cttgaaccaaagtccgggagcaaattcattgctggaggagaagatatgtgggttcatgta 301 || |||||||| || ||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 1130 ctggaaccaaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgta 1189 Query: 302 tttgatttcctcaccggtgaagaaataacctgtatcaaagggcatcatggtccagttcac 361 ||||||||| |||| ||||||||||||||||||| ||| |||||||||||||| || ||| Sbjct: 1190 tttgatttcttcactggtgaagaaataacctgtaacaaggggcatcatggtcctgtccac 1249 Query: 362 tgcgtccggtttgcacctgtgggcgaatcatatgcctcagggtcggaagatgg 414 || ||||| |||||||||| || ||||| ||||| ||||| || |||||||| Sbjct: 1250 tgtgtccgctttgcacctggcggtgaatcttatgcatcaggatcagaagatgg 1302
>dbj|AK100386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085I20, full insert sequence Length = 1806 Score = 414 bits (209), Expect = e-113 Identities = 362/413 (87%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggttatgggat 61 |||| ||| ||||| ||||| || || ||| |||||| || |||||||| || |||||| Sbjct: 819 catagtgatcaaacaatactaagctcgtgctctgatatgggaggagtaagattgtgggat 878 Query: 62 gtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgttactagtgcagaa 121 ||||||| || ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 879 gtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagcgcagaa 938 Query: 122 gtaagccaggatggcaggttcatcaccacagctgatggctcaagtgtaaaattttgggat 181 ||||| || || ||||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 939 gtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattttgggat 998 Query: 182 gctaatcactttgggcttgttaaaagctatgatatgtcgtttactgtggagtcagcttca 241 |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 999 gctaatcactttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttcc 1058 Query: 242 cttgaaccaaagtccgggagcaaattcattgctggaggagaagatatgtgggttcatgta 301 || |||||||| || ||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 1059 ctggaaccaaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgta 1118 Query: 302 tttgatttcctcaccggtgaagaaataacctgtatcaaagggcatcatggtccagttcac 361 ||||||||| |||| ||||||||||||||||||| ||| |||||||||||||| || ||| Sbjct: 1119 tttgatttcttcactggtgaagaaataacctgtaacaaggggcatcatggtcctgtccac 1178 Query: 362 tgcgtccggtttgcacctgtgggcgaatcatatgcctcagggtcggaagatgg 414 || ||||| |||||||||| || ||||| ||||| ||||| || |||||||| Sbjct: 1179 tgtgtccgctttgcacctggcggtgaatcttatgcatcaggatcagaagatgg 1231
>gb|AY105430.1| Zea mays PCO119892 mRNA sequence Length = 1553 Score = 400 bits (202), Expect = e-108 Identities = 334/378 (88%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggttatgggat 61 |||| ||||||||||||| |||||||||||||||| | |||||||||||| | |||||| Sbjct: 809 catagtgaccaaactatattgagttcctgcactgacatgggtggagtaaggctgtgggat 868 Query: 62 gtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgttactagtgcagaa 121 || || | || ||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 869 gttagaactggaaaaattgtccaaactcttgaaaccaaggcttctgtcactagtgcagaa 928 Query: 122 gtaagccaggatggcaggttcatcaccacagctgatggctcaagtgtaaaattttgggat 181 |||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 929 gtaagccaggatggcaggttcatcactactgctgatggctcaagtgtaaaattctgggac 988 Query: 182 gctaatcactttgggcttgttaaaagctatgatatgtcgtttactgtggagtcagcttca 241 || ||||||||||| ||||||||||||||||||||| | | | |||||| || |||||| Sbjct: 989 gcgaatcactttggccttgttaaaagctatgatatgccatgcaatgtggaatcggcttca 1048 Query: 242 cttgaaccaaagtccgggagcaaattcattgctggaggagaagatatgtgggttcatgta 301 |||||||| ||||| ||||| ||||| | ||||||||||||||| | |||||||||||| Sbjct: 1049 cttgaacctaagtctgggagtaaatttgtcgctggaggagaagatttatgggttcatgta 1108 Query: 302 tttgatttcctcaccggtgaagaaataacctgtatcaaagggcatcatggtccagttcac 361 ||||||||| |||| |||||||||||| | |||| |||||| |||||||||||||| ||| Sbjct: 1109 tttgatttcttcactggtgaagaaatagcttgtaacaaaggacatcatggtccagtccac 1168 Query: 362 tgcgtccggtttgcacct 379 || ||||||||||||||| Sbjct: 1169 tgtgtccggtttgcacct 1186
>gb|AY107089.1| Zea mays PCO119890 mRNA sequence Length = 944 Score = 343 bits (173), Expect = 3e-91 Identities = 302/345 (87%) Strand = Plus / Plus Query: 80 gtccaaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcagg 139 |||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 7 gtccgaactcttgaaaccaaggcttctattactagtgcagaagtaagccaggatggcagg 66 Query: 140 ttcatcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgggctt 199 |||||||| ||||| |||||||||||||||||||||||||| || |||||||| || ||| Sbjct: 67 ttcatcactacagcagatggctcaagtgtaaaattttgggacgcgaatcacttcggcctt 126 Query: 200 gttaaaagctatgatatgtcgtttactgtggagtcagcttcacttgaaccaaagtccggg 259 || ||||||||||||||| ||| | |||||||||||||||||||||||| ||||| ||| Sbjct: 127 gtgaaaagctatgatatgccgtgcaatgtggagtcagcttcacttgaacccaagtctggg 186 Query: 260 agcaaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcaccggt 319 || ||||| | ||||||||||||||| |||||||||||||||| |||||| |||| ||| Sbjct: 187 agtaaatttgtagctggaggagaagatttgtgggttcatgtattcgatttcttcactggt 246 Query: 320 gaagaaataacctgtatcaaagggcatcatggtccagttcactgcgtccggtttgcacct 379 ||||||||| | |||| ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 247 gaagaaatagcttgtaacaaagggcatcatggaccggtccactgtgtccggtttgcacct 306 Query: 380 gtgggcgaatcatatgcctcagggtcggaagatggtactattagg 424 | || |||||||| || || || || |||||||| || |||||| Sbjct: 307 ggtggtgaatcatacgcatcgggttcagaagatggcaccattagg 351
>ref|XM_464562.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1663 Score = 319 bits (161), Expect = 4e-84 Identities = 341/401 (85%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggttatgggat 61 |||| ||||||| ||||| | |||| ||||||||||| ||||| |||||||| |||||| Sbjct: 785 catagtgaccaatctatattaagttgctgcactgatatgggtggcgtaaggttgtgggat 844 Query: 62 gtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgttactagtgcagaa 121 || ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 845 gtaaggagtggaaaaattgctcaaactcttgaaaccaaggctactgttactagtgcagaa 904 Query: 122 gtaagccaggatggcaggttcatcaccacagctgatggctcaagtgtaaaattttgggat 181 |||||||| |||||| ||| ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 905 gtaagccaagatggccggtacatcattacagctgatggttccagtgtcaaattttgggat 964 Query: 182 gctaatcactttgggcttgttaaaagctatgatatgtcgtttactgtggagtcagcttca 241 || ||| |||| || |||||||| |||||| ||||| | | | |||||| |||||||| Sbjct: 965 gcaaattacttcggacttgttaagagctataatatgccatgcaatgtggaatcagcttct 1024 Query: 242 cttgaaccaaagtccgggagcaaattcattgctggaggagaagatatgtgggttcatgta 301 ||||||||||||| |||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 1025 cttgaaccaaagtatgggaacaaattcattgctggtggagaagacatgtgggtccatgtc 1084 Query: 302 tttgatttcctcaccggtgaagaaataacctgtatcaaagggcatcatggtccagttcac 361 ||||||||| |||| |||||||||||||| || | |||||| || || |||||||| || Sbjct: 1085 tttgatttcttcactggtgaagaaataacttgcaacaaaggccaccacggtccagtccat 1144 Query: 362 tgcgtccggtttgcacctgtgggcgaatcatatgcctcagg 402 |||||||||||||| |||| ||||| || ||||| ||||| Sbjct: 1145 tgcgtccggtttgctcctggcggcgagtcgtatgcatcagg 1185
>dbj|AK101434.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038M11, full insert sequence Length = 1663 Score = 319 bits (161), Expect = 4e-84 Identities = 341/401 (85%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggttatgggat 61 |||| ||||||| ||||| | |||| ||||||||||| ||||| |||||||| |||||| Sbjct: 785 catagtgaccaatctatattaagttgctgcactgatatgggtggcgtaaggttgtgggat 844 Query: 62 gtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgttactagtgcagaa 121 || ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 845 gtaaggagtggaaaaattgctcaaactcttgaaaccaaggctactgttactagtgcagaa 904 Query: 122 gtaagccaggatggcaggttcatcaccacagctgatggctcaagtgtaaaattttgggat 181 |||||||| |||||| ||| ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 905 gtaagccaagatggccggtacatcattacagctgatggttccagtgtcaaattttgggat 964 Query: 182 gctaatcactttgggcttgttaaaagctatgatatgtcgtttactgtggagtcagcttca 241 || ||| |||| || |||||||| |||||| ||||| | | | |||||| |||||||| Sbjct: 965 gcaaattacttcggacttgttaagagctataatatgccatgcaatgtggaatcagcttct 1024 Query: 242 cttgaaccaaagtccgggagcaaattcattgctggaggagaagatatgtgggttcatgta 301 ||||||||||||| |||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 1025 cttgaaccaaagtatgggaacaaattcattgctggtggagaagacatgtgggtccatgtc 1084 Query: 302 tttgatttcctcaccggtgaagaaataacctgtatcaaagggcatcatggtccagttcac 361 ||||||||| |||| |||||||||||||| || | |||||| || || |||||||| || Sbjct: 1085 tttgatttcttcactggtgaagaaataacttgcaacaaaggccaccacggtccagtccat 1144 Query: 362 tgcgtccggtttgcacctgtgggcgaatcatatgcctcagg 402 |||||||||||||| |||| ||||| || ||||| ||||| Sbjct: 1145 tgcgtccggtttgctcctggcggcgagtcgtatgcatcagg 1185
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 174 bits (88), Expect = 2e-40 Identities = 127/140 (90%) Strand = Plus / Minus Query: 190 ctttgggcttgttaaaagctatgatatgtcgtttactgtggagtcagcttcacttgaacc 249 |||||||||||||||||||||||||||| | | ||||||||||||||||| || ||||| Sbjct: 23231160 ctttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttccctggaacc 23231101 Query: 250 aaagtccgggagcaaattcattgctggaggagaagatatgtgggttcatgtatttgattt 309 ||| || ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 23231100 aaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgtatttgattt 23231041 Query: 310 cctcaccggtgaagaaataa 329 | |||| ||||||||||||| Sbjct: 23231040 cttcactggtgaagaaataa 23231021 Score = 163 bits (82), Expect = 6e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 56 tgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgttactagt 115 ||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 23231390 tgggatgtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagc 23231331 Query: 116 gcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgtaaaattt 175 ||||||||||| || || ||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 23231330 gcagaagtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattt 23231271 Query: 176 tgggatgctaatca 189 |||||||||||||| Sbjct: 23231270 tgggatgctaatca 23231257 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 330 cctgtatcaaagggcatcatggtccagttcactgcgtccggtttgcacctgtgggcgaat 389 |||||| ||| |||||||||||||| || ||||| ||||| |||||||||| || |||| Sbjct: 23230204 cctgtaacaaggggcatcatggtcctgtccactgtgtccgctttgcacctggcggtgaat 23230145 Query: 390 catatgcctcagggtcggaagatgg 414 | ||||| ||||| || |||||||| Sbjct: 23230144 cttatgcatcaggatcagaagatgg 23230120
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 174 bits (88), Expect = 2e-40 Identities = 127/140 (90%) Strand = Plus / Minus Query: 190 ctttgggcttgttaaaagctatgatatgtcgtttactgtggagtcagcttcacttgaacc 249 |||||||||||||||||||||||||||| | | ||||||||||||||||| || ||||| Sbjct: 65922 ctttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttccctggaacc 65863 Query: 250 aaagtccgggagcaaattcattgctggaggagaagatatgtgggttcatgtatttgattt 309 ||| || ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 65862 aaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgtatttgattt 65803 Query: 310 cctcaccggtgaagaaataa 329 | |||| ||||||||||||| Sbjct: 65802 cttcactggtgaagaaataa 65783 Score = 163 bits (82), Expect = 6e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 56 tgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgttactagt 115 ||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 66152 tgggatgtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagc 66093 Query: 116 gcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgtaaaattt 175 ||||||||||| || || ||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 66092 gcagaagtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattt 66033 Query: 176 tgggatgctaatca 189 |||||||||||||| Sbjct: 66032 tgggatgctaatca 66019 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 330 cctgtatcaaagggcatcatggtccagttcactgcgtccggtttgcacctgtgggcgaat 389 |||||| ||| |||||||||||||| || ||||| ||||| |||||||||| || |||| Sbjct: 64966 cctgtaacaaggggcatcatggtcctgtccactgtgtccgctttgcacctggcggtgaat 64907 Query: 390 catatgcctcagggtcggaagatgg 414 | ||||| ||||| || |||||||| Sbjct: 64906 cttatgcatcaggatcagaagatgg 64882
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 8e-30 Identities = 118/134 (88%) Strand = Plus / Plus Query: 50 aggttatgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgtt 109 ||||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||| Sbjct: 5928592 aggttgtgggatgtaaggagtggaaaaattgctcaaactcttgaaaccaaggctactgtt 5928651 Query: 110 actagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgta 169 |||||||||||||||||||| |||||| ||| ||||| ||||||||||| || ||||| Sbjct: 5928652 actagtgcagaagtaagccaagatggccggtacatcattacagctgatggttccagtgtc 5928711 Query: 170 aaattttgggatgc 183 |||||||||||||| Sbjct: 5928712 aaattttgggatgc 5928725 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 197 cttgttaaaagctatgatatgtcgtttactgtggagtcagcttcacttgaaccaaagtcc 256 |||||||| |||||| ||||| | | | |||||| |||||||| ||||||||||||| Sbjct: 5928824 cttgttaagagctataatatgccatgcaatgtggaatcagcttctcttgaaccaaagtat 5928883 Query: 257 gggagcaaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcacc 316 |||| ||||||||||||||| |||||||| |||||||| ||||| ||||||||| |||| Sbjct: 5928884 gggaacaaattcattgctggtggagaagacatgtgggtccatgtctttgatttcttcact 5928943 Query: 317 ggtgaagaaataa 329 ||||||||||||| Sbjct: 5928944 ggtgaagaaataa 5928956 Score = 44.1 bits (22), Expect = 0.36 Identities = 55/66 (83%) Strand = Plus / Plus Query: 337 caaagggcatcatggtccagttcactgcgtccggtttgcacctgtgggcgaatcatatgc 396 |||||| || || |||||||| || |||||||||||||| |||| ||||| || ||||| Sbjct: 5929553 caaaggccaccacggtccagtccattgcgtccggtttgctcctggcggcgagtcgtatgc 5929612 Query: 397 ctcagg 402 ||||| Sbjct: 5929613 atcagg 5929618 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggt 53 |||| ||||||| ||||| | |||| ||||||||||| ||||| ||||||| Sbjct: 5927898 catagtgaccaatctatattaagttgctgcactgatatgggtggcgtaaggt 5927949
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 139 bits (70), Expect = 8e-30 Identities = 118/134 (88%) Strand = Plus / Plus Query: 50 aggttatgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgtt 109 ||||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||| Sbjct: 106813 aggttgtgggatgtaaggagtggaaaaattgctcaaactcttgaaaccaaggctactgtt 106872 Query: 110 actagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgta 169 |||||||||||||||||||| |||||| ||| ||||| ||||||||||| || ||||| Sbjct: 106873 actagtgcagaagtaagccaagatggccggtacatcattacagctgatggttccagtgtc 106932 Query: 170 aaattttgggatgc 183 |||||||||||||| Sbjct: 106933 aaattttgggatgc 106946 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 197 cttgttaaaagctatgatatgtcgtttactgtggagtcagcttcacttgaaccaaagtcc 256 |||||||| |||||| ||||| | | | |||||| |||||||| ||||||||||||| Sbjct: 107045 cttgttaagagctataatatgccatgcaatgtggaatcagcttctcttgaaccaaagtat 107104 Query: 257 gggagcaaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcacc 316 |||| ||||||||||||||| |||||||| |||||||| ||||| ||||||||| |||| Sbjct: 107105 gggaacaaattcattgctggtggagaagacatgtgggtccatgtctttgatttcttcact 107164 Query: 317 ggtgaagaaataa 329 ||||||||||||| Sbjct: 107165 ggtgaagaaataa 107177 Score = 44.1 bits (22), Expect = 0.36 Identities = 55/66 (83%) Strand = Plus / Plus Query: 337 caaagggcatcatggtccagttcactgcgtccggtttgcacctgtgggcgaatcatatgc 396 |||||| || || |||||||| || |||||||||||||| |||| ||||| || ||||| Sbjct: 107774 caaaggccaccacggtccagtccattgcgtccggtttgctcctggcggcgagtcgtatgc 107833 Query: 397 ctcagg 402 ||||| Sbjct: 107834 atcagg 107839 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggt 53 |||| ||||||| ||||| | |||| ||||||||||| ||||| ||||||| Sbjct: 106119 catagtgaccaatctatattaagttgctgcactgatatgggtggcgtaaggt 106170
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 139 bits (70), Expect = 8e-30 Identities = 118/134 (88%) Strand = Plus / Plus Query: 50 aggttatgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgtt 109 ||||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||| Sbjct: 158394 aggttgtgggatgtaaggagtggaaaaattgctcaaactcttgaaaccaaggctactgtt 158453 Query: 110 actagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgta 169 |||||||||||||||||||| |||||| ||| ||||| ||||||||||| || ||||| Sbjct: 158454 actagtgcagaagtaagccaagatggccggtacatcattacagctgatggttccagtgtc 158513 Query: 170 aaattttgggatgc 183 |||||||||||||| Sbjct: 158514 aaattttgggatgc 158527 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 197 cttgttaaaagctatgatatgtcgtttactgtggagtcagcttcacttgaaccaaagtcc 256 |||||||| |||||| ||||| | | | |||||| |||||||| ||||||||||||| Sbjct: 158626 cttgttaagagctataatatgccatgcaatgtggaatcagcttctcttgaaccaaagtat 158685 Query: 257 gggagcaaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcacc 316 |||| ||||||||||||||| |||||||| |||||||| ||||| ||||||||| |||| Sbjct: 158686 gggaacaaattcattgctggtggagaagacatgtgggtccatgtctttgatttcttcact 158745 Query: 317 ggtgaagaaataa 329 ||||||||||||| Sbjct: 158746 ggtgaagaaataa 158758 Score = 44.1 bits (22), Expect = 0.36 Identities = 55/66 (83%) Strand = Plus / Plus Query: 337 caaagggcatcatggtccagttcactgcgtccggtttgcacctgtgggcgaatcatatgc 396 |||||| || || |||||||| || |||||||||||||| |||| ||||| || ||||| Sbjct: 159355 caaaggccaccacggtccagtccattgcgtccggtttgctcctggcggcgagtcgtatgc 159414 Query: 397 ctcagg 402 ||||| Sbjct: 159415 atcagg 159420 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 2 cataatgaccaaactatactgagttcctgcactgatactggtggagtaaggt 53 |||| ||||||| ||||| | |||| ||||||||||| ||||| ||||||| Sbjct: 157700 catagtgaccaatctatattaagttgctgcactgatatgggtggcgtaaggt 157751
>ref|NM_112431.2| Arabidopsis thaliana nucleotide binding AT3G15610 mRNA, complete cds Length = 1549 Score = 111 bits (56), Expect = 2e-21 Identities = 236/296 (79%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| |||||||||| |||||| || |||||||||||||||||||||| ||||| || Sbjct: 778 agttcttgcactgatattggtggtgtgaggttatgggatgtgaggagtggcaaaatagtg 837 Query: 83 caaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcaggttc 142 |||||||| ||||||||| ||||| || ||||| ||||| || || ||||| ||| Sbjct: 838 caaactctagaaaccaagtctcctgtcaccagtgctgaagtgagtcaagatggacggtat 897 Query: 143 atcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgggcttgtt 202 || || || || ||||| |||| ||| |||||||||||||| ||||| ||||| || || Sbjct: 898 ataacaactgccgatgggtcaactgttaaattttgggatgcaaatcattttggactagtg 957 Query: 203 aaaagctatgatatgtcgtttactgtggagtcagcttcacttgaaccaaagtccgggagc 262 ||||| || || ||| | | | | | || || || || ||||| ||||| || || | | Sbjct: 958 aaaagttacgacatgccctgcaatatcgaatctgcatcgcttgagccaaaatctggcaac 1017 Query: 263 aaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcaccgg 318 |||||| ||||||| ||||||||||||||||||| | |||||||||| |||||| Sbjct: 1018 aaattcgttgctggtggagaagatatgtgggttcgactctttgatttccacaccgg 1073
>gb|BT003420.1| Arabidopsis thaliana Unknown protein (At3g15610) mRNA, complete cds Length = 1047 Score = 111 bits (56), Expect = 2e-21 Identities = 236/296 (79%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| |||||||||| |||||| || |||||||||||||||||||||| ||||| || Sbjct: 484 agttcttgcactgatattggtggtgtgaggttatgggatgtgaggagtggcaaaatagtg 543 Query: 83 caaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcaggttc 142 |||||||| ||||||||| ||||| || ||||| ||||| || || ||||| ||| Sbjct: 544 caaactctagaaaccaagtctcctgtcaccagtgctgaagtgagtcaagatggacggtat 603 Query: 143 atcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgggcttgtt 202 || || || || ||||| |||| ||| |||||||||||||| ||||| ||||| || || Sbjct: 604 ataacaactgccgatgggtcaactgttaaattttgggatgcaaatcattttggactagtg 663 Query: 203 aaaagctatgatatgtcgtttactgtggagtcagcttcacttgaaccaaagtccgggagc 262 ||||| || || ||| | | | | | || || || || ||||| ||||| || || | | Sbjct: 664 aaaagttacgacatgccctgcaatatcgaatctgcatcgcttgagccaaaatctggcaac 723 Query: 263 aaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcaccgg 318 |||||| ||||||| ||||||||||||||||||| | |||||||||| |||||| Sbjct: 724 aaattcgttgctggtggagaagatatgtgggttcgactctttgatttccacaccgg 779
>gb|BT002047.1| Arabidopsis thaliana expressed protein (At3g15610) mRNA, complete cds Length = 1538 Score = 111 bits (56), Expect = 2e-21 Identities = 236/296 (79%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| |||||||||| |||||| || |||||||||||||||||||||| ||||| || Sbjct: 830 agttcttgcactgatattggtggtgtgaggttatgggatgtgaggagtggcaaaatagtg 889 Query: 83 caaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcaggttc 142 |||||||| ||||||||| ||||| || ||||| ||||| || || ||||| ||| Sbjct: 890 caaactctagaaaccaagtctcctgtcaccagtgctgaagtgagtcaagatggacggtat 949 Query: 143 atcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgggcttgtt 202 || || || || ||||| |||| ||| |||||||||||||| ||||| ||||| || || Sbjct: 950 ataacaactgccgatgggtcaactgttaaattttgggatgcaaatcattttggactagtg 1009 Query: 203 aaaagctatgatatgtcgtttactgtggagtcagcttcacttgaaccaaagtccgggagc 262 ||||| || || ||| | | | | | || || || || ||||| ||||| || || | | Sbjct: 1010 aaaagttacgacatgccctgcaatatcgaatctgcatcgcttgagccaaaatctggcaac 1069 Query: 263 aaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcaccgg 318 |||||| ||||||| ||||||||||||||||||| | |||||||||| |||||| Sbjct: 1070 aaattcgttgctggtggagaagatatgtgggttcgactctttgatttccacaccgg 1125
>emb|BX822390.1|CNS0A7TD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1425 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| |||||||||| |||||| || |||||||||||||||||||||| ||||| || Sbjct: 826 agttcttgcactgatattggtggtgtgaggttatgggatgtgaggagtggcaaaatagtg 885 Query: 83 caaactcttgaaaccaag 100 |||||||| ||||||||| Sbjct: 886 caaactctagaaaccaag 903
>gb|BT013991.1| Lycopersicon esculentum clone 133036F, mRNA sequence Length = 1920 Score = 79.8 bits (40), Expect = 7e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggttcatgtatttgattt 309 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1223 ttcattgctggaggagaagatatgtgggttcatgtctttgattt 1266 Score = 50.1 bits (25), Expect = 0.006 Identities = 124/157 (78%) Strand = Plus / Plus Query: 39 ctggtggagtaaggttatgggatgtgaggagtgaaaaaattgtccaaactcttgaaacca 98 |||||||| | ||||||||||| ||||||| | ||| |||| |||| |||||||| | Sbjct: 996 ctggtggattgaggttatgggacgtgaggaccggcaaagttgttcaaatccttgaaacta 1055 Query: 99 agggacctgttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatg 158 || ||||| || ||||| |||||||| |||||||| | | ||| || || ||||||| Sbjct: 1056 agtttcctgtaaccagtgctgaagtaagtcaggatggtcgttacataacaactgctgatg 1115 Query: 159 gctcaagtgtaaaattttgggatgctaatcactttgg 195 | || ||| || |||||||||||||| |||||||| Sbjct: 1116 gttcctctgtcaagttttgggatgctaaccactttgg 1152 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 386 gaatcatatgcctcagggtcggaagatggtactattag 423 ||||| ||||||||||| || |||||||| |||||||| Sbjct: 1343 gaatcctatgcctcaggatctgaagatgggactattag 1380
>dbj|AB233412.1| Nicotiana glutinosa Ng0808 mRNA for putative WD-40 repeat protein, complete cds Length = 1011 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 272 gctggaggagaagatatgtgggttcatgtatttgatttcctcaccggtgaagaaataacc 331 |||||||||||||| |||||| ||| ||||||| |||||| ||| |||||||| | | Sbjct: 733 gctggaggagaagacatgtggattcgtgtatttaatttccacactggtgaagagcttgca 792 Query: 332 tgtatcaaagggcatcatggtccagttcactgcgtccggtttgcacctgtgggcgaatca 391 || | ||| |||||||||||||| || ||||| ||||| ||||| ||| || |||||| Sbjct: 793 tgcaacaaggggcatcatggtcctgtacactgtgtccgatttgctcctagtggagaatca 852 Query: 392 tatgcctcagggtcggaagatgg 414 ||||| ||||| || |||||||| Sbjct: 853 tatgcttcaggatctgaagatgg 875
>ref|NM_104151.3| Arabidopsis thaliana nucleotide binding AT1G52730 transcript variant AT1G52730.1 mRNA, complete cds Length = 1525 Score = 73.8 bits (37), Expect = 4e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| || ||||||| ||| || ||||||||||||||||||||||||| |||||||| Sbjct: 821 agttcatgtactgatattggcggtgtaaggttatgggatgtgaggagtgggaaaattgtg 880 Query: 83 caaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcaggttc 142 ||||| | ||||| ||| ||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 881 caaacgttagaaactaagtctcctgtcaccagtgctgaagtgagccaagatggacggtat 940 Query: 143 atcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgg 195 || || || |||||||| |||| ||| ||||| ||||| ||||| || ||||| Sbjct: 941 ataacaactgctgatgggtcaactgttaaattctgggacgctaaccattttgg 993
>ref|NM_179469.2| Arabidopsis thaliana nucleotide binding AT1G52730 transcript variant AT1G52730.2 mRNA, complete cds Length = 1379 Score = 73.8 bits (37), Expect = 4e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| || ||||||| ||| || ||||||||||||||||||||||||| |||||||| Sbjct: 675 agttcatgtactgatattggcggtgtaaggttatgggatgtgaggagtgggaaaattgtg 734 Query: 83 caaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcaggttc 142 ||||| | ||||| ||| ||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 735 caaacgttagaaactaagtctcctgtcaccagtgctgaagtgagccaagatggacggtat 794 Query: 143 atcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgg 195 || || || |||||||| |||| ||| ||||| ||||| ||||| || ||||| Sbjct: 795 ataacaactgctgatgggtcaactgttaaattctgggacgctaaccattttgg 847
>gb|BT008315.1| Arabidopsis thaliana At1g52730 gene, complete cds Length = 1032 Score = 73.8 bits (37), Expect = 4e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| || ||||||| ||| || ||||||||||||||||||||||||| |||||||| Sbjct: 484 agttcatgtactgatattggcggtgtaaggttatgggatgtgaggagtgggaaaattgtg 543 Query: 83 caaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcaggttc 142 ||||| | ||||| ||| ||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 544 caaacgttagaaactaagtctcctgtcaccagtgctgaagtgagccaagatggacggtat 603 Query: 143 atcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgg 195 || || || |||||||| |||| ||| ||||| ||||| ||||| || ||||| Sbjct: 604 ataacaactgctgatgggtcaactgttaaattctgggacgctaaccattttgg 656
>emb|BX814860.1|CNS0AAN8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1353 Score = 73.8 bits (37), Expect = 4e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| || ||||||| ||| || ||||||||||||||||||||||||| |||||||| Sbjct: 661 agttcatgtactgatattggcggtgtaaggttatgggatgtgaggagtgggaaaattgtg 720 Query: 83 caaactcttgaaaccaagggacctgttactagtgcagaagtaagccaggatggcaggttc 142 ||||| | ||||| ||| ||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 721 caaacgttagaaactaagtctcctgtcaccagtgctgaagtgagccaagatggacggtat 780 Query: 143 atcaccacagctgatggctcaagtgtaaaattttgggatgctaatcactttgg 195 || || || |||||||| |||| ||| ||||| ||||| ||||| || ||||| Sbjct: 781 ataacaactgctgatgggtcaactgttaaattctgggacgctaaccattttgg 833
>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11 Length = 81370 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 50 aggttatgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgtt 109 |||||||||||||||||||||| ||||| || |||||||| ||||||||| ||||| Sbjct: 1131 aggttatgggatgtgaggagtggcaaaatagtgcaaactctagaaaccaagtctcctgtc 1072 Query: 110 actagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgta 169 || ||||| ||||| || || ||||| ||| || || || || ||||| |||| ||| Sbjct: 1071 accagtgctgaagtgagtcaagatggacggtatataacaactgccgatgggtcaactgtt 1012 Query: 170 aaattttgggatgctaatca 189 |||||||||||||| ||||| Sbjct: 1011 aaattttgggatgcaaatca 992 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 262 caaattcattgctggaggagaagatatgtgggttcatgtatttgatttcctcaccgg 318 ||||||| ||||||| ||||||||||||||||||| | |||||||||| |||||| Sbjct: 829 caaattcgttgctggtggagaagatatgtgggttcgactctttgatttccacaccgg 773
>emb|BX814472.1|CNS0AC3H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1320 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgtc 82 ||||| || ||||||| ||| || ||||||||||||||||||||||||| |||||||| Sbjct: 675 agttcatgtactgatattggcggtgtaaggttatgggatgtgaggagtgggaaaattgtg 734 Query: 83 caaac 87 ||||| Sbjct: 735 caaac 739
>emb|BX816358.1|CNS0ABS9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 23 agttcctgcactgatactggtggagtaaggttatgggatgtgaggagtgaaaaaattgt 81 ||||| || ||||||| ||| || ||||||||||||||||||||||||| |||||||| Sbjct: 785 agttcatgtactgatattggcggtgtaaggttatgggatgtgaggagtgggaaaattgt 843
>ref|NM_101416.2| Arabidopsis thaliana nucleotide binding AT1G15470 mRNA, complete cds Length = 1416 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 959 ttcattgctggaggagaagatatgtgggt 987 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 800 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 859 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 860 gttaagttttgggacgctaa 879
>gb|BT000935.1| Arabidopsis thaliana clone C105255 unknown protein (At1g15470) mRNA, complete cds Length = 1033 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 712 ttcattgctggaggagaagatatgtgggt 740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 553 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 612 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 613 gttaagttttgggacgctaa 632
>gb|AY074392.1| Arabidopsis thaliana At1g15470 mRNA sequence Length = 1399 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 929 ttcattgctggaggagaagatatgtgggt 957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 770 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 829 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 830 gttaagttttgggacgctaa 849
>emb|BX816395.1|CNS0ABOE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1279 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 930 ttcattgctggaggagaagatatgtgggt 958 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 771 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 830 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 831 gttaagttttgggacgctaa 850
>emb|BX814278.1|CNS0ACA0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZH04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 910 ttcattgctggaggagaagatatgtgggt 938 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 751 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 810 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 811 gttaagttttgggacgctaa 830
>emb|BX813912.1|CNS0ACCK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 945 ttcattgctggaggagaagatatgtgggt 973
>emb|BX816692.1|CNS0ABTG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZB12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 951 ttcattgctggaggagaagatatgtgggt 979 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 792 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 851 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 852 gttaagttttgggacgctaa 871
>emb|BX814506.1|CNS0ABZ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 948 ttcattgctggaggagaagatatgtgggt 976 Score = 48.1 bits (24), Expect = 0.023 Identities = 66/80 (82%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | ||| || || |||||||| || ||| Sbjct: 789 gttactagtgctgaagtaagtcaggatgggcgatacataactactgctgatggatctagt 848 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 849 gtcaagttttgggacgctaa 868
>emb|BX817070.1|CNS0ABOR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1355 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 943 ttcattgctggaggagaagatatgtgggt 971 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 784 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 843 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 844 gttaagttttgggacgctaa 863
>emb|BX816861.1|CNS0ABKM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1224 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 853 ttcattgctggaggagaagatatgtgggt 881 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 694 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 753 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 754 gttaagttttgggacgctaa 773
>gb|AC019018.9|AC019018 Arabidopsis thaliana chromosome 1 BAC F14G24 genomic sequence, complete sequence Length = 126253 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 50 aggttatgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgtt 109 |||||||||||||||||||||| |||||||| ||||| | ||||| ||| ||||| Sbjct: 13208 aggttatgggatgtgaggagtgggaaaattgtgcaaacgttagaaactaagtctcctgtc 13267 Query: 110 actagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgta 169 || ||||| ||||| ||||| ||||| ||| || || || |||||||| |||| ||| Sbjct: 13268 accagtgctgaagtgagccaagatggacggtatataacaactgctgatgggtcaactgtt 13327 Query: 170 aaattttgggatgctaa 186 ||||| ||||| ||||| Sbjct: 13328 aaattctgggacgctaa 13344
>gb|AY084604.1| Arabidopsis thaliana clone 113014 mRNA, complete sequence Length = 1411 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 959 ttcattgctggaggagaagatatgtgggt 987 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 800 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 859 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 860 gttaagttttgggacgctaa 879
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 20700 ttcattgctggaggagaagatatgtgggt 20728 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 20456 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 20515 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 20516 gttaagttttgggacgctaa 20535
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence Length = 117737 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 50 aggttatgggatgtgaggagtgaaaaaattgtccaaactcttgaaaccaagggacctgtt 109 |||||||||||||||||||||| |||||||| ||||| | ||||| ||| ||||| Sbjct: 1673 aggttatgggatgtgaggagtgggaaaattgtgcaaacgttagaaactaagtctcctgtc 1614 Query: 110 actagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagtgta 169 || ||||| ||||| ||||| ||||| ||| || || || |||||||| |||| ||| Sbjct: 1613 accagtgctgaagtgagccaagatggacggtatataacaactgctgatgggtcaactgtt 1554 Query: 170 aaattttgggatgctaa 186 ||||| ||||| ||||| Sbjct: 1553 aaattctgggacgctaa 1537
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 266 ttcattgctggaggagaagatatgtgggt 294 ||||||||||||||||||||||||||||| Sbjct: 132855 ttcattgctggaggagaagatatgtgggt 132883 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 107 gttactagtgcagaagtaagccaggatggcaggttcatcaccacagctgatggctcaagt 166 ||||||||||| |||||||| |||||||| | | |||||| || |||||||| || ||| Sbjct: 132611 gttactagtgctgaagtaagtcaggatgggcgatacatcactactgctgatggatctagt 132670 Query: 167 gtaaaattttgggatgctaa 186 || || |||||||| ||||| Sbjct: 132671 gttaagttttgggacgctaa 132690
>gb|AC104077.2| Homo sapiens BAC clone RP11-413P19 from 4, complete sequence Length = 122108 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 221 tttactgtggagtcagcttcactt 244 |||||||||||||||||||||||| Sbjct: 73812 tttactgtggagtcagcttcactt 73835
>gb|AC144827.2| Danio rerio clone CH211-77C11, complete sequence Length = 192706 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 atgtatttgatttcctcaccg 317 ||||||||||||||||||||| Sbjct: 183022 atgtatttgatttcctcaccg 183002
>emb|CR450773.12| Zebrafish DNA sequence from clone DKEY-204N14 in linkage group 12, complete sequence Length = 162078 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 atgtatttgatttcctcaccg 317 ||||||||||||||||||||| Sbjct: 19968 atgtatttgatttcctcaccg 19948
>ref|XM_445048.1| Candida glabrata CBS138, CAGL0B01815g partial mRNA Length = 873 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 attgctggaggagaagatatg 289 ||||||||||||||||||||| Sbjct: 448 attgctggaggagaagatatg 468
>emb|CR380948.1| Candida glabrata strain CBS138 chromosome B complete sequence Length = 502101 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 attgctggaggagaagatatg 289 ||||||||||||||||||||| Sbjct: 166073 attgctggaggagaagatatg 166053
>emb|AL671861.13| Mouse DNA sequence from clone RP23-160B4 on chromosome X, complete sequence Length = 199760 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 gcttgttaaaagctatgatat 216 ||||||||||||||||||||| Sbjct: 107907 gcttgttaaaagctatgatat 107887
>emb|AL672304.8| Mouse DNA sequence from clone RP23-3G8 on chromosome X, complete sequence Length = 197592 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 gcttgttaaaagctatgatat 216 ||||||||||||||||||||| Sbjct: 157407 gcttgttaaaagctatgatat 157387
>gb|AC102052.7| Mus musculus chromosome 3, clone RP23-460F15, complete sequence Length = 175306 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gctcaagtgtaaaattttgg 178 |||||||||||||||||||| Sbjct: 6067 gctcaagtgtaaaattttgg 6048
>ref|XM_954005.1| Neurospora crassa OR74A hypothetical protein (NCU09188.1) partial mRNA Length = 2721 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aaagggcatcatggtccagt 357 |||||||||||||||||||| Sbjct: 2019 aaagggcatcatggtccagt 2038
>ref|XM_331579.1| Neurospora crassa OR74A hypothetical protein (NCU09188.1) partial mRNA Length = 2721 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aaagggcatcatggtccagt 357 |||||||||||||||||||| Sbjct: 2019 aaagggcatcatggtccagt 2038
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240410 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ataacctgtatcaaagggca 345 |||||||||||||||||||| Sbjct: 124723 ataacctgtatcaaagggca 124742
>emb|AL162390.9| Human DNA sequence from clone RP11-386J22 on chromosome 9 Contains the SMC5L1 gene for SMC5 structural maintenance of chromosomes 5-like 1 (yeast) (SMC5, KIAA0594), the BTEB1 gene for basic transcription element binding protein 1 (BTEB, KLF9) and three CpG islands, complete sequence Length = 182427 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cagcttcacttgaaccaaag 253 |||||||||||||||||||| Sbjct: 105358 cagcttcacttgaaccaaag 105377
>emb|BX537694.1|HSM805768 Homo sapiens genomic DNA; cDNA DKFZp686J1449 (from clone DKFZp686J1449) Length = 3192 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cagcttcacttgaaccaaag 253 |||||||||||||||||||| Sbjct: 1909 cagcttcacttgaaccaaag 1928
>emb|CR457482.5| Zebrafish DNA sequence from clone CH211-159P3 in linkage group 15, complete sequence Length = 158288 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 aaagctatgatatgtcgttt 223 |||||||||||||||||||| Sbjct: 141499 aaagctatgatatgtcgttt 141480
>gb|AC102128.18| Mus musculus chromosome 3, clone RP23-205G9, complete sequence Length = 192509 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gctcaagtgtaaaattttgg 178 |||||||||||||||||||| Sbjct: 178924 gctcaagtgtaaaattttgg 178905
>ref|XM_310087.2| Anopheles gambiae str. PEST ENSANGP00000018894 (ENSANGG00000016405), partial mRNA Length = 1194 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 ctgatggctcaagtgtaaaatttt 176 ||||||||| |||||||||||||| Sbjct: 884 ctgatggcttaagtgtaaaatttt 907
>gb|U00455.1|U00455 Acipenser transmontano vitellogenin mRNA, partial cds Length = 5455 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ttcatcaccacagctgatgg 159 |||||||||||||||||||| Sbjct: 1975 ttcatcaccacagctgatgg 1956 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,084,648 Number of Sequences: 3902068 Number of extensions: 4084648 Number of successful extensions: 70682 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70494 Number of HSP's gapped (non-prelim): 180 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)