Clone Information

BLAST Search Result

Clone Name	baet24c03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CJ095_HUMAN (Q9H7T3) Protein C10orf95	35	0.082
2	TES_MOUSE (P47226) Testin (TES1/TES2)	35	0.11
3	MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor (Mu...	34	0.14
4	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	33	0.31
5	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	33	0.41
6	CS016_HUMAN (Q8ND99) Protein C19orf16	32	0.53
7	MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor (...	32	0.70
8	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	32	0.91
9	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	31	1.2
10	TEGU_EBV (P03186) Large tegument protein	31	1.6
11	CJ047_HUMAN (Q86WR7) Protein C10orf47	31	1.6
12	TBX18_HUMAN (O95935) T-box transcription factor TBX18 (T-box pro...	31	1.6
13	EZ3_MAIZE (Q8S4P4) Polycomb protein EZ3 (Enhancer of zeste prote...	31	1.6
14	EZ2_MAIZE (Q8S4P5) Polycomb protein EZ2 (Enhancer of zeste prote...	31	1.6
15	CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)	31	1.6
16	CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor	30	2.0
17	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	30	2.0
18	SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dep...	30	2.0
19	SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)	30	2.0
20	FGD3_PONPY (Q5R5T1) FYVE, RhoGEF and PH domain-containing protein 3	30	2.0
21	YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3	30	2.7
22	RSD1_SCHPO (O13845) RNA-binding protein rsd1	30	2.7
23	PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)	30	2.7
24	ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (T...	30	2.7
25	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	30	2.7
26	CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor	30	2.7
27	PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.1...	30	2.7
28	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	30	2.7
29	MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-...	25	2.8
30	LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding pro...	30	3.5
31	BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc...	30	3.5
32	POMT2_HUMAN (Q9UKY4) Protein O-mannosyl-transferase 2 (EC 2.4.1....	30	3.5
33	IF2_SYNEL (Q8DK04) Translation initiation factor IF-2	30	3.5
34	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	30	3.5
35	PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21	30	3.5
36	MILK2_HUMAN (Q8IY33) MICAL-like protein 2	30	3.5
37	COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor	30	3.5
38	CBPA_DICDI (P35085) Calcium-binding protein	30	3.5
39	TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.2...	30	3.5
40	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	3.5
41	TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box prote...	29	4.5
42	KCNKF_HUMAN (Q9H427) Potassium channel subfamily K member 15 (Ac...	29	4.5
43	USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein ho...	29	4.5
44	TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorti...	29	4.5
45	PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precu...	29	4.5
46	APP1_SCHPO (Q9P7E8) Protein app1	29	4.5
47	DUSC_SALTY (Q8ZNM4) tRNA-dihydrouridine synthase C (EC 1.-.-.-)	29	4.5
48	IM30_ARATH (O80796) Probable membrane-associated 30 kDa protein,...	29	5.9
49	METE_XYLFA (Q9PB72) 5-methyltetrahydropteroyltriglutamate--homoc...	29	5.9
50	CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)	29	5.9
51	TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.2...	29	5.9
52	PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacema...	29	5.9
53	YLL2_EBV (P03199) Hypothetical protein BLLF2	29	5.9
54	BORG3_HUMAN (Q6NZY7) Cdc42 effector protein 5 (Binder of Rho GTP...	29	5.9
55	SPR1B_MOUSE (Q62267) Cornifin B (Small proline-rich protein 1B) ...	29	5.9
56	NOS3_BOVIN (P29473) Nitric-oxide synthase, endothelial (EC 1.14....	29	5.9
57	ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1...	29	5.9
58	DUSC_SALTI (Q8Z5B2) tRNA-dihydrouridine synthase C (EC 1.-.-.-)	29	5.9
59	EPN3_MOUSE (Q91W69) Epsin-3 (EPS-15-interacting protein 3)	28	7.7
60	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	28	7.7
61	LPXD_BORPE (Q7VYC0) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a...	28	7.7
62	LPXD_BORPA (Q7WA50) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a...	28	7.7
63	CSKI2_MOUSE (Q8VHK1) Caskin-2	28	7.7
64	ENDX_PSEFL (Q9WVZ1) Extracellular endonuclease precursor (EC 3.1...	28	7.7
65	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	28	7.7
66	DDR1_HUMAN (Q08345) Epithelial discoidin domain-containing recep...	28	7.7
67	SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 ...	28	7.7
68	ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (1...	28	7.7
69	ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (1...	28	7.7
70	ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (1...	28	7.7
71	DDR1_PANTR (Q7YR43) Epithelial discoidin domain-containing recep...	28	7.7
72	L_EBOZM (Q05318) Large structural protein (L protein) (Transcrip...	28	7.7
73	TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Ta...	28	7.7
74	CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor	28	7.7
75	ZN319_HUMAN (Q9P2F9) Zinc finger protein 319	28	7.7
76	CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antige...	28	7.7
77	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	28	7.7

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
 Frame = -1

Query: 361 P*GPPARQLP--CASQVSKPVDSHA-CQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGY 191
           P GP  R  P  CA     P      C+ P    + G  G  AG C     G   SARG 
Sbjct: 119 PGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAAWSARGA 178

Query: 190 RPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
             C  R   A        PT   T  +PS AA
Sbjct: 179 PLCSYRTSCAGSCGARTAPTPAPTCASPSAAA 210

to top

>TES_MOUSE (P47226) Testin (TES1/TES2)|
          Length = 423

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 241 LRAPHPTRLGTRTKESDMRASR-RVLKPGMRKEADEREALTGRTAGRP*SSVKGS 402
           + A HPTRLGTRTKES+  AS+  V KP    E +  E    R   R  + VK S
Sbjct: 1   MSATHPTRLGTRTKESNACASQGLVRKPPWANEGEGFELHFWRKICRNCNVVKKS 55

to top

>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin) (GP100)
          Length = 862

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -1

Query: 187 PCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHP 41
           P     P  P A G   P+  TT+ TPS +   Q P     G  AGP P
Sbjct: 459 PPSTESPTPPEAGGTTGPSSNTTLETPSTSGTSQGPATTSSGGSAGPFP 507

to top

>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = -1

Query: 349 PARQLPCAS-QVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRR 173
           P++  P A  + + P  S A + P +  Q  +   PA   S  PR T     G +P  R 
Sbjct: 83  PSQAAPAAGDRAAAPRPSAAPKAP-AAQQPAAPSAPAPAPSQGPRPTP----GPKPAPRP 137

Query: 172 QPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPG 62
            P AP      PP  P    TP+ A    +P   RPG
Sbjct: 138 APAAPEFTA--PPAAPAAPSTPAPAPSGPKPGGARPG 172

to top

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 26/95 (27%), Positives = 31/95 (32%)
 Frame = -1

Query: 301 SHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPT 122
           S A +      Q  +DG P    +    G R    G        P    APG WPP +P 
Sbjct: 659 SQAAEASHQAAQSDTDGPPGQGANGSHAGDRQRQHGPTQPDYGAPPGWHAPG-WPPQQPP 717

Query: 121 TVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQA 17
               P      Q P+         P P PS   QA
Sbjct: 718 DYWYPPEQQPSQSPY--------WPQPAPSYPGQA 744

to top

>CS016_HUMAN (Q8ND99) Protein C19orf16|
          Length = 567

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 38/127 (29%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
 Frame = -1

Query: 379 VGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSA 200
           +G   GP GPP    PC    S PV S  C+ P+ V Q       + +  AVP      A
Sbjct: 41  MGSHQGP-GPP----PCQKAPSGPVTS--CKAPFLVDQ-------SQKLPAVP------A 80

Query: 199 RGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSR------AADQQEPFRIRPGRIAGPHPL 38
             ++P           PGL PP +      P R      A  Q+ P    P + A   P 
Sbjct: 81  SSWKP----------PPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPA 130

Query: 37  PSRQFQA 17
           PSR+  A
Sbjct: 131 PSRKASA 137

to top

>MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 831

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -1

Query: 181 RRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHP 41
           R R P  P A G   P+  TT+  P  +   Q P     G   GP P
Sbjct: 457 RERTPTPPEAGGTTGPSSNTTMEAPLTSGTSQRPATTSSGGSVGPFP 503

to top

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 35/122 (28%), Positives = 43/122 (35%)
 Frame = -1

Query: 397 PSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPR 218
           P Q+    Q+  P  PP +Q P   Q SKPV     Q P         G   G  SA P 
Sbjct: 76  PPQQPPPHQQPPPHQPPHQQPPPPPQESKPV---VPQGP---------GSAPGVSSAPPP 123

Query: 217 GTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPL 38
              +SA    P     P  P      PP  P+T   P   +         P +  GP P 
Sbjct: 124 A--VSAPPANPPTTGAPPGPGPTPTPPPAVPSTAPGPPPPSTPSSGVSTTPPQTGGPPPP 181

Query: 37  PS 32
           P+
Sbjct: 182 PA 183

to top

>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 33/118 (27%), Positives = 41/118 (34%), Gaps = 2/118 (1%)
 Frame = -1

Query: 442  SSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPV--DSHACQTPWSVF 269
            S P+ G  Q  S S   Q   V     P GPP    P     S P    S + Q P S  
Sbjct: 1011 SHPTTGLHQVPSQSPFPQHPFV-----PGGPPPITPPSCPPTSTPPAGPSSSSQPPCSAA 1065

Query: 268  QDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                   P      +P    +  +        +PE+P  P   P   PT V TPS A+
Sbjct: 1066 VSSGGSVPGAPSCPLPA---VQIKEEALDEAEEPESPPPPPRSPSPEPTVVDTPSHAS 1120

to top

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
 Frame = -1

Query: 445 HSSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQ 266
           H  P+ G R   S++  ++  ++ +   P   P    P A+++  PV     Q+P +   
Sbjct: 424 HKKPTSGRRLPLSSTTDTEDDQLPRTHVPPHRP----PSAARLPPPVIPIPHQSPPA--- 476

Query: 265 DGSDGEPAGRCSAVPRGT---RLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                 PA   +  P  T   RL  +   P  +  P  P+ P   P   PT    P+   
Sbjct: 477 -SPTPHPAPVSTIAPSVTPSPRLPLQIPIPLPQAAPSNPKIPLTTPSPSPTAAAAPTTTT 535

Query: 94  DQQEPFRIRPGRIAGPHPLP 35
               P + +P + A P P P
Sbjct: 536 LSPPPTQQQPPQSAAPAPSP 555

to top

>CJ047_HUMAN (Q86WR7) Protein C10orf47|
          Length = 435

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = -1

Query: 337 LPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAP 158
           L  A ++S+ +  +   +P S F++G  GE     +   RG R    G  P    QP+AP
Sbjct: 195 LVMAQKISERMAGNEALSPTSPFREGRPGEWR---TPAARGPRSGDPGPGPSHPAQPKAP 251

Query: 157 RAP 149
           R P
Sbjct: 252 RFP 254

to top

>TBX18_HUMAN (O95935) T-box transcription factor TBX18 (T-box protein 18)|
          Length = 607

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +3

Query: 141 QSPGALGASGCRRRHGRYPRAERRVPRGTALQRPAGSPSDPS---WNTDQGV*HACESTG 311
           ++ GA+   GC R  G   +       G AL  PAG+ S P+    + ++G    CE  G
Sbjct: 45  EAAGAVDDGGCSRGGGAGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCED-G 103

Query: 312 FETWDAQGS*RAGGPHG 362
           F+   +  +   G P G
Sbjct: 104 FQQGASPLASPGGSPKG 120

to top

>EZ3_MAIZE (Q8S4P4) Polycomb protein EZ3 (Enhancer of zeste protein 3)|
          Length = 895

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = -1

Query: 427 GSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGE 248
           G  ++C N     K R G  C      +RQ PC +  S+  D   C+  W    DGS GE
Sbjct: 674 GCSKSCKN-----KFR-GCHCAKSQCRSRQCPCFA-ASRECDPDVCRNCWVSCGDGSLGE 726

Query: 247 PAGR 236
           P  R
Sbjct: 727 PPAR 730

to top

>EZ2_MAIZE (Q8S4P5) Polycomb protein EZ2 (Enhancer of zeste protein 2)|
          Length = 894

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = -1

Query: 427 GSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGE 248
           G  ++C N     K R G  C      +RQ PC +  S+  D   C+  W    DGS GE
Sbjct: 673 GCSKSCKN-----KFR-GCHCAKSQCRSRQCPCFA-ASRECDPDVCRNCWVSCGDGSLGE 725

Query: 247 PAGR 236
           P  R
Sbjct: 726 PLAR 729

to top

>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 30/112 (26%), Positives = 47/112 (41%)
 Frame = -1

Query: 352  PPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRR 173
            PPA+  P A + ++ ++  A Q       + ++G P GR      G++++  G    R  
Sbjct: 1948 PPAQPPPAAVEAARQIEREAQQQQHLYRANINNGMPPGRDGMGTPGSQMTPVGLNVPRPN 2007

Query: 172  QPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQA 17
            Q   P    + PP +      P     QQ+P    PG    P P+ S Q QA
Sbjct: 2008 QVSGPVMSSM-PPGQWQQAPIP-----QQQPM---PGM---PRPVMSMQAQA 2047

to top

>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
 Frame = +3

Query: 81  GSCWSAARLGVWTVVGRVGGQSPGALGASGCRRRHGRYPRAERRVPRGTALQR------- 239
           G   +  R G   + G VG  +PG  GASG R   G    +    PRG+  +R       
Sbjct: 670 GDTGNTGRDGARGIPGAVG--APGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAG 727

Query: 240 ------PAGSPSDPSWNTDQGV*HACESTGFETWDAQGS*RAGGPHGPHRWP 377
                 PAG+   P    ++G        G       GS  A GP GP+  P
Sbjct: 728 PNGFAGPAGAAGQPGAKGEKGTKGPKGENGIV--GPTGSVGAAGPSGPNGPP 777

to top

>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 25/91 (27%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
 Frame = -1

Query: 361  P*GPPARQLPCASQVSKPV--DSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYR 188
            P GPP    P     S P    S + Q P S         P      +P    +  +   
Sbjct: 1033 PGGPPPITPPSCPPTSTPPAGPSSSSQPPCSAAVSSGGNVPGAPSCPLPA---VQIKEEA 1089

Query: 187  PCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                 +PE+P  P   P   PT V TPS A+
Sbjct: 1090 LDEAEEPESPPPPPRSPSPEPTVVDTPSHAS 1120

to top

>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 2 (SWI/SNF complex 170
            kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -1

Query: 181  RRRQPEAPRAPGLWPP-TRPTTVHTPSRAADQQEPFRIRPGRIAGP-HP 41
            +++QP     PG  PP   P   H PS   +QQ P  + PG + G  HP
Sbjct: 1023 QQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1071

to top

>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)|
          Length = 582

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 116 PHPEPSGGPARAVPHTA--GAHRRPPSASLPA 27
           P P P    A A P TA  G  R+PP AS PA
Sbjct: 38  PPPGPGAASASAAPPTASPGPERKPPPASAPA 69

to top

>FGD3_PONPY (Q5R5T1) FYVE, RhoGEF and PH domain-containing protein 3|
          Length = 737

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/63 (28%), Positives = 25/63 (39%)
 Frame = -1

Query: 241 GRCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPG 62
           G+CS         +R  R C   QP AP +P    P +P      +  AD Q      P 
Sbjct: 564 GKCSEFKAENSRQSRVCRECFLTQPVAPESPSPEAPAKPRRSTEKTPTADPQPSLLCGPL 623

Query: 61  RIA 53
           R++
Sbjct: 624 RLS 626

to top

>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3|
          Length = 266

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 27/95 (28%), Positives = 31/95 (32%)
 Frame = -1

Query: 364 GP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRP 185
           GP GPP    P         D+     P S  QDG  G P  +  + P G          
Sbjct: 118 GPPGPPGPPGPSG-------DAGGNGNPGSPGQDGQPGAPGNKGPSGPNG---------- 160

Query: 184 CRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEP 80
                P AP APG      P+   TP     Q  P
Sbjct: 161 ----NPGAPGAPGQPGQDAPSEPITPGAPGPQGTP 191

to top

>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 36/134 (26%), Positives = 46/134 (34%), Gaps = 8/134 (5%)
 Frame = -2

Query: 423 PDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPS-TRTHVRLLGPCSKT----G 259
           P R+            AS +  E     S  +HP    P  TR H R   P SK     G
Sbjct: 12  PFRKQEVPQNQENQQKASSSFHESSLTSSTHSHPSNPPPPPTRLHDRSFKPVSKNYESEG 71

Query: 258 RMGSPQAVAAQC---PEGHAFRRAGTGHVDDGNXXXXXXXXXXXXXXRQQSTPRAERRTS 88
           R+  P              +F+R  +G+ DD                    TPR  RR+ 
Sbjct: 72  RLTPPPVSMGYRYARSSKQSFQREDSGYNDD-----------VVTNSSSHRTPRHHRRSY 120

Query: 87  KSRSAYGRGASPAP 46
             RS YG   SP+P
Sbjct: 121 SPRSDYG-SRSPSP 133

to top

>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)|
          Length = 1244

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
 Frame = -1

Query: 247  PAGR---CSAVPRGTR--LSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQE 83
            P+GR   C +  + +R   + R   PC    P    + G WPP   T   TP  A  Q  
Sbjct: 824  PSGRRHHCRSKAKRSRHHQTPRPETPCYVSHPSPVPSSGPWPPPPAT---TPFPAVVQPY 880

Query: 82   PFRIRPGRIAGPHPLP 35
            P  +   R  GP PLP
Sbjct: 881  PLPVFSPR-GGPQPLP 895

to top

>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
 Frame = -1

Query: 325 SQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPRAPG 146
           +Q  +P+ + A   P     D +D   A   SA PR  R         +R+ P   R PG
Sbjct: 694 NQSLRPLLAAAASAP-----DAADALAAAAASAAPREGR---------KRKSPGPARPPG 739

Query: 145 LWPPTRPTT----VHTPSRAADQQEPFRIRPGRIAGPHPLPSR 29
              P  P T       P   A    P    P    GP P P++
Sbjct: 740 GGGPRPPKTKKSGADAPGSDARAPLPAPAPPSTPPGPEPAPAQ 782

to top

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
 Frame = -1

Query: 229 AVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTR-----PTTVHTPSRAADQQEPFRIRP 65
           A P G     RG  P   R+P  P   G  PP       PT +++PS        +   P
Sbjct: 149 APPSGGHTPPRGQHPPSHRRPSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPP 208

Query: 64  GRIAGPHPLP 35
                P P P
Sbjct: 209 PTHVQPTPSP 218

to top

>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor|
          Length = 1691

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 33/105 (31%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
 Frame = +3

Query: 102 RLGVWTVVGRVGGQS-PGALGASGCRRRHGRYPRAERRVPRGTALQRPAGSPSDPSWNTD 278
           R G    VG  G    PG  G  G R   G         P GTA+  P G P  P     
Sbjct: 348 RPGTGVTVGEKGNMGLPGLPGEKGERGFPGIQGPPGLPGPPGTAVMGPPGPPGFPGERGQ 407

Query: 279 QG--V*HACESTGFETWDAQ----GS*RAGGPHGPHRWPTLIFCE 395
           +G          GF   D Q    G     GP GPH  P+   CE
Sbjct: 408 KGDEGPPGISIPGFPGLDGQPGAPGLRGPPGPPGPHISPSDEICE 452

to top

>PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein|
           kinase PKN-beta) (Protein-kinase C-related kinase 3)
          Length = 889

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 30/109 (27%), Positives = 44/109 (40%)
 Frame = -1

Query: 334 PCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPR 155
           PC+S  +        +TP +  ++ SD  PA   + +P+ T L      P        P+
Sbjct: 464 PCSSPSTISPPKGCPRTP-TTLREASD--PATPSNFLPKKTPLGEEMTPP--------PK 512

Query: 154 APGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQALFD 8
            P L+ P  PT+  TP       EP   R  R   P   P+R+   L D
Sbjct: 513 PPRLYLPQEPTSEETPRTKRPHMEP---RTRRGPSPPASPTRKPPRLQD 558

to top

>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 1/90 (1%)
 Frame = -1

Query: 361  P*GPPARQLP-CASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRP 185
            P GPP    P C S  + P        P       S G  AG  S      ++       
Sbjct: 1041 PGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD 1100

Query: 184  CRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
                +PE+P  P   P   PT V TPS A+
Sbjct: 1101 AE--EPESPPPPPRSPSPEPTVVDTPSHAS 1128

to top

>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2) (Demethylase) (DMTase)
          Length = 411

 Score = 25.4 bits (54), Expect(2) = 2.8
 Identities = 19/64 (29%), Positives = 22/64 (34%)
 Frame = +3

Query: 33  EGSGWGPAMRPGRMRNGSCWSAARLGVWTVVGRVGGQSPGALGASGCRRRHGRYPRAERR 212
           +GS   P+   G  R G+       G W   GR GG      G    R R     R   R
Sbjct: 37  QGSALAPSPVSGVRREGARGGGRGRGRWKQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGR 96

Query: 213 VPRG 224
            P G
Sbjct: 97  PPSG 100



 Score = 23.1 bits (48), Expect(2) = 2.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 235 NGLRAPHPTRLGTRTKESDMRASRRVLKPGMRKEADEREALTGRTAGR 378
           +G   P P   G R  ES  R     L PG +KE   R+  +G +AG+
Sbjct: 131 SGSAGPGPR--GPRATESGKRMDCPALPPGWKKEEVIRK--SGLSAGK 174

to top

>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)|
          Length = 687

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 110 PEPSGGPARAVPHTAGAHRRPPSASLP 30
           P+PS G   A  H++  H +PPS S P
Sbjct: 423 PQPSNGSREAGAHSSSNHAQPPSHSRP 449

to top

>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2158

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 181 RRRQPEAPRAPGLWPPTRPTTVHT-PSRAADQQEPFRIRPGRIAGPHPLPSRQF 23
           +++Q  AP AP    P +P T+   P+  A    P  + PG +  P P+P   F
Sbjct: 666 QQQQGTAPPAPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNF 719

to top

>POMT2_HUMAN (Q9UKY4) Protein O-mannosyl-transferase 2 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           2)
          Length = 750

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 150 GALGASGCRRRHGRY-PRAERRVPRGTALQRPAGSPSDPSWNT 275
           G L  S  R R GR  P+A R   R  A +  A SP  P+W +
Sbjct: 7   GGLAESELRPRRGRCGPQAARAAGRDVAAEAVARSPKRPAWGS 49

to top

>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 8/90 (8%)
 Frame = -1

Query: 259 SDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSR------- 101
           S   P  + +  P+ T+     +   R   PEAP+     PP RP     P+R       
Sbjct: 66  SKTSPPVKKAPAPQKTQQIVAVHTQPRSETPEAPKPQLQKPPARPQPPQAPTRPTPPAPV 125

Query: 100 AADQQEPFRIR-PGRIAGPHPLPSRQFQAL 14
           A    EP   + P   A P P P R    L
Sbjct: 126 APKPVEPVAAKPPAPPAKPEPTPPRPVPTL 155

to top

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2161

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 181 RRRQPEAPRAPGLWPPTRPTTVHT-PSRAADQQEPFRIRPGRIAGPHPLPSRQF 23
           +++Q  AP AP    P +P T+   P+  A    P  + PG +  P P+P   F
Sbjct: 667 QQQQGTAPPAPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNF 720

to top

>PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21|
          Length = 632

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
 Frame = -3

Query: 119 SPHPEPSGGPARAVPHT--------AGAHRRPPSASLPA 27
           S HP PS G  RAV HT         GAH   P+A+  A
Sbjct: 515 SQHPVPSSGGTRAVGHTHFPLPGQSEGAHTTSPAAAAAA 553

to top

>MILK2_HUMAN (Q8IY33) MICAL-like protein 2|
          Length = 904

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
 Frame = -3

Query: 221 PRDTPFGARVPAMSXXXXXXXXXXXXXXADAADNSPHPEPSGGPARA--------VPHTA 66
           PR    G  +PA S               D  DN   PEP G  AR          PH  
Sbjct: 645 PRPASPGPSLPARSPSPPRRRRLAVPASLDVCDNWLRPEPPGQEARVQSWKEEEKKPHLQ 704

Query: 65  GAHRRPPS-ASLPAI 24
           G   RP S A++PA+
Sbjct: 705 GKPGRPLSPANVPAL 719

to top

>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor|
          Length = 680

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
 Frame = +3

Query: 120 VVGRVGGQSP-GALGASGCRRRHGRY-PRAERRVPRGTALQRPAGSPSDPSWNTDQGV*H 293
           V G  G + P G +GA G    +G   PR E  +P       P G P  P    D G   
Sbjct: 414 VGGTPGLRGPVGPVGAKGVPGHNGEAGPRGEPGIPGTRGPTGPPGVPGFPGSKGDPGNPG 473

Query: 294 ACESTGFETWDAQGS*RAGGPHGP 365
           A    G  T    G     GP GP
Sbjct: 474 APGPAGIATKGLNGPTGPPGPPGP 497

to top

>CBPA_DICDI (P35085) Calcium-binding protein|
          Length = 467

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -1

Query: 175 RQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQ 20
           +QP AP APG +PP +P         A  Q P + +PG+   P   P +  Q
Sbjct: 65  QQPGAPGAPGQYPPQQPGQYPPQQPGAPGQYPPQ-QPGQPGYPPQQPGQSGQ 115

to top

>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 25/78 (32%), Positives = 29/78 (37%)
 Frame = -3

Query: 248 ARRPLQRSAPRDTPFGARVPAMSXXXXXXXXXXXXXXADAADNSPHPEPSGGPARAVPHT 69
           AR P Q S  R +P  AR P  +                 A  +  P P   PARA P  
Sbjct: 12  ARTPPQASPARTSP--ARAPPQASPARTPPQASPARTPPQASPARAPPPQASPARASP-- 67

Query: 68  AGAHRRPPSASLPAISST 15
               R PPS S    SS+
Sbjct: 68  ---ARAPPSRSSSGRSSS 82

to top

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 36/137 (26%), Positives = 46/137 (33%), Gaps = 9/137 (6%)
 Frame = -2

Query: 429 SGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRF------QNPSTR---THVRLLG 277
           S P ++  +    RRS S S   R+G P        R        +PS R   +H     
Sbjct: 631 SPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNRETRSPPQNKRDSPSPRPRASHTSSSP 690

Query: 276 PCSKTGRMGSPQAVAAQCPEGHAFRRAGTGHVDDGNXXXXXXXXXXXXXXRQQSTPRAER 97
           P  + G   SPQ   +  P     RR                            +PR+ R
Sbjct: 691 PPLRRGASASPQRRQSPSPSTRPIRRVSR-------------TPEPKKTKASTPSPRSAR 737

Query: 96  RTSKSRSAYGRGASPAP 46
           R S SRSA G    PAP
Sbjct: 738 RVSSSRSASG-SPEPAP 753

to top

>TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box protein 6)|
          Length = 540

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/73 (28%), Positives = 26/73 (35%)
 Frame = -1

Query: 352 PPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRR 173
           PP + L  AS    P  SH   TP  +      G        +P  + LSA G   C  +
Sbjct: 468 PPTKWLAWASL--PPFSSHLDFTPPPLASKLRQGSSESSWGLLPLSSHLSANGGSLCLAK 525

Query: 172 QPEAPRAPGLWPP 134
               P  P  W P
Sbjct: 526 WGSQPSTPTSWGP 538

to top

>KCNKF_HUMAN (Q9H427) Potassium channel subfamily K member 15 (Acid-sensitive|
           potassium channel protein TASK-5) (TWIK-related
           acid-sensitive K(+) channel 5) (Two pore potassium
           channel KT3.3)
          Length = 330

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 199 RGYRPCRRRQPEAPRAPGLWPPTRP 125
           R  RP   R P AP + GLW P RP
Sbjct: 256 RAARPPSPRPPGAPESRGLWLPRRP 280

to top

>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ|
           domain-containing protein)
          Length = 910

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
 Frame = -1

Query: 349 PARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPA-----GRCSAVPRGTRLSARGYRP 185
           P R LP A  + + + +H        F+ G  G PA        S  P  +  + R + P
Sbjct: 618 PTRPLPSA--LEEALGNHP-------FRTGDPGHPADDWEANTHSGKPSSSPTTERSFPP 668

Query: 184 CRRR---QPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRP 65
             +     P+ PR PG+   ++P  VH       Q+  F  RP
Sbjct: 669 APKTFCPSPQPPRGPGVSTISKPVMVH-------QEHNFVYRP 704

to top

>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1305

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = -1

Query: 250 EPAGRCSAVPRGTRLSARGYRPCRR----RQPEAPRAPGLWPPTRPTTVHTPSRAADQQE 83
           +PAGRC  +PR   L+  G  P  R     + +A     L  PT PTT  TP+   ++++
Sbjct: 544 DPAGRC-LLPRPKSLA--GSSPSTRLLTLEEAQARTQGRLGTPTEPTTPKTPASPVERRK 600

Query: 82  PFRIRPGRIAG 50
             R    R  G
Sbjct: 601 RERAEKQRKPG 611

to top

>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
 Frame = -1

Query: 352 PPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRR 173
           PP    PC      P D  A Q P           PA + S  P    + A    P ++ 
Sbjct: 149 PPPPPSPCKPS---PPDQSAKQPP--------QPPPAKQPSPPPPPPPVKAPSPSPAKQP 197

Query: 172 QPEAP--RAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGP 47
            P  P  +AP   P T+P T   P     ++ P    P  +A P
Sbjct: 198 PPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYP 241

to top

>APP1_SCHPO (Q9P7E8) Protein app1|
          Length = 857

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
 Frame = -3

Query: 284 SLVRVPRRVGW---GARRPLQRSAPRDTPFGARVPAMSXXXXXXXXXXXXXXADAADNSP 114
           S +RVP    W   G +   Q + P+ TPFG+  P+                       P
Sbjct: 216 SNLRVPVNASWSDAGRKEKSQENKPKPTPFGSGGPS----------------------KP 253

Query: 113 HPEPSGGPARAVPHTAGAHRRPPSASLPAISS 18
            P  S GPA+ +      H +P  ++    SS
Sbjct: 254 TPFESHGPAKQISVQPSEHPKPSISTTTTGSS 285

to top

>DUSC_SALTY (Q8ZNM4) tRNA-dihydrouridine synthase C (EC 1.-.-.-)|
          Length = 312

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 10/78 (12%)
 Frame = +2

Query: 188 PVPARRKACPSGHCAA-TACGLPIRPVL---------EHGPRSLTCVRVDGF*NLGCARK 337
           PV    + CP  H A+ T  G P+R  L         E+  R+          N GC  K
Sbjct: 42  PVKVFHRICPELHHASRTPSGTPVRIQLLGQHPQWLAENAARATALGSYGVDLNCGCPSK 101

Query: 338 LTSGRPSRAAPLADPDLL 391
           + +G    A  L DP+L+
Sbjct: 102 VVNGSGGGATLLKDPELI 119

to top

>IM30_ARATH (O80796) Probable membrane-associated 30 kDa protein, chloroplast|
           precursor
          Length = 330

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 166 EAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGR 59
           +A    GL+PP RPT   +PS ++++    RI P R
Sbjct: 4   KASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLR 39

to top

>METE_XYLFA (Q9PB72) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 758

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 26/94 (27%), Positives = 33/94 (35%), Gaps = 4/94 (4%)
 Frame = -1

Query: 274 VFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAA 95
           V  D  D +P    +       L AR   P   R   A R   L P T       P R+ 
Sbjct: 361 VLADALDNKPEAETALTQTRQALEARRQSPKVHRPEVAQRLAALTPDTTQRNTAYPQRSQ 420

Query: 94  DQQEPFRI--RPGRIAG--PHPLPSRQFQALFDS 5
            QQ+   +   P    G  P  L  R+ +A F S
Sbjct: 421 AQQQTLNLPAYPTTTIGSFPQTLEVREARAQFKS 454

to top

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 29/112 (25%), Positives = 46/112 (41%)
 Frame = -1

Query: 352  PPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRR 173
            PPA+  P A + ++ ++  A Q       + ++  P GR      G++++       R  
Sbjct: 1947 PPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPN 2006

Query: 172  QPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLPSRQFQA 17
            Q   P  P + PP +      P     QQ+P    PG    P P+ S Q QA
Sbjct: 2007 QVSGPVMPSM-PPGQWQQAPLP-----QQQPM---PGL---PRPVISMQAQA 2046

to top

>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 25/84 (29%), Positives = 31/84 (36%)
 Frame = -3

Query: 269 PRRVGWGARRPLQRSAPRDTPFGARVPAMSXXXXXXXXXXXXXXADAADNSPHPEPSGGP 90
           P R       P Q S P  TP G   PA +              A  A  SP   P   P
Sbjct: 11  PARTPSAGASPAQAS-PAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP---P 66

Query: 89  ARAVPHTAGAHRRPPSASLPAISS 18
            RA P  A   +  P+ + PA++S
Sbjct: 67  GRASPGRASPAQASPARASPALAS 90

to top

>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein|
           Rigui) (mPER) (M-Rigui)
          Length = 1291

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = -1

Query: 187 PCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGPHPLP 35
           PC    P    + G WPP   T   TP  A  Q  P  +   R  GP PLP
Sbjct: 852 PCYVSHPSPVPSSGPWPPPPAT---TPFPAMVQPYPLPVFSPR-GGPQPLP 898

to top

>YLL2_EBV (P03199) Hypothetical protein BLLF2|
          Length = 148

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
 Frame = -1

Query: 310 PVDSHACQTPWSVFQDGSDGEPAGR--CSAVP----RGTRLSARGYRPCRRRQPEAPRAP 149
           PV  H  Q P           PA R     VP    RG  +S +   P  +R+P  P A 
Sbjct: 4   PVRQHPAQAP-----------PAKRQALETVPHPQNRGRLMSPKARPPKMQRRPRPPVAK 52

Query: 148 GLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAGP 47
               P  P  V  P     +  P  + PG++  P
Sbjct: 53  RRRFPRSPQQVERPILPPVESTPQDMEPGQVQSP 86

to top

>BORG3_HUMAN (Q6NZY7) Cdc42 effector protein 5 (Binder of Rho GTPases 3)|
          Length = 148

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 24/72 (33%), Positives = 30/72 (41%)
 Frame = +3

Query: 48  GPAMRPGRMRNGSCWSAARLGVWTVVGRVGGQSPGALGASGCRRRHGRYPRAERRVPRGT 227
           GPA    R   G+   +A LG +     VG +   A G +    RHG  P  E R P   
Sbjct: 8   GPAQPKKRPDRGALSISAPLGDFRHTLHVG-RGGDAFGDTSFLSRHGGGPPPEPRAP--- 63

Query: 228 ALQRPAGSPSDP 263
               PAG+P  P
Sbjct: 64  ----PAGAPRSP 71

to top

>SPR1B_MOUSE (Q62267) Cornifin B (Small proline-rich protein 1B) (SPR1B) (SPR1|
           B)
          Length = 153

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 34/133 (25%), Positives = 45/133 (33%), Gaps = 2/133 (1%)
 Frame = -1

Query: 433 SFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSD 254
           S   +Q C+      + +V Q C P  PP    PC SQV  P D+               
Sbjct: 3   SHQQKQPCTAPPQLHEQQVKQPCQP--PPPE--PCVSQVKTPCDTKV------------- 45

Query: 253 GEPAGRCSAVPRGTRLSARGYRPCRRRQPEA--PRAPGLWPPTRPTTVHTPSRAADQQEP 80
            EP    +  P       +   PC  + PE   P+AP    P  P   H   +A +   P
Sbjct: 46  PEPCHPKAPEP----CHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEPCH--PKAPEPCHP 99

Query: 79  FRIRPGRIAGPHP 41
               P     P P
Sbjct: 100 KAPEPCHPKAPEP 112

to top

>NOS3_BOVIN (P29473) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSASL 33
           SP PEPS  PA A PH       P S +L
Sbjct: 32  SPAPEPSRAPAPATPHAPDHSPAPNSPTL 60

to top

>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1424

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/65 (32%), Positives = 27/65 (41%)
 Frame = -1

Query: 289 QTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHT 110
           QT W V           + S  PR     +R  RPCRRR+ + P    +  P  P+   T
Sbjct: 4   QTDWRVSSTSRTRRTVMK-SKHPRPPPRQSRLQRPCRRRRLQPPPRLLIQAPIHPSRHCT 62

Query: 109 PSRAA 95
            SR A
Sbjct: 63  QSRTA 67

to top

>DUSC_SALTI (Q8Z5B2) tRNA-dihydrouridine synthase C (EC 1.-.-.-)|
          Length = 312

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
 Frame = +2

Query: 188 PVPARRKACPSG-HCAATACGLPIRPVL---------EHGPRSLTCVRVDGF*NLGCARK 337
           PV    + CP   H + T  G P+R  L         E+  R+          N GC  K
Sbjct: 42  PVKVFHRICPELLHASRTPSGTPVRIQLLGQHPQWLAENAARATALGSYGVDLNCGCPSK 101

Query: 338 LTSGRPSRAAPLADPDLL 391
           + +G    A  L DP+L+
Sbjct: 102 VVNGSGGGATLLTDPELI 119

to top

>EPN3_MOUSE (Q91W69) Epsin-3 (EPS-15-interacting protein 3)|
          Length = 636

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 27/105 (25%), Positives = 35/105 (33%)
 Frame = -1

Query: 406 NSNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSA 227
           N+ PS     G   GP   P   +P  + +S+         PW +    S  EP GR   
Sbjct: 325 NTEPS-----GSSWGPSADPWSPVPSGNALSR-------SQPWDLLPTLSSSEPWGRTPV 372

Query: 226 VPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAAD 92
           +P G                  P     W P+ PT    PS  AD
Sbjct: 373 LPSG------------------PPIADPWAPSSPTR-KLPSTGAD 398

to top

>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +3

Query: 147 PGALGASGCRRRHGRYPR----AERRVPRGTALQRPAGSPSDPSWNTDQG 284
           PGA+G SG   + G   R     ER +P    ++ PAG P  P     +G
Sbjct: 218 PGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRG 267

to top

>LPXD_BORPE (Q7VYC0) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -2

Query: 435 HLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 295
           HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 28  HLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

to top

>LPXD_BORPA (Q7WA50) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -2

Query: 435 HLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 295
           HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 28  HLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

to top

>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
 Frame = -3

Query: 251  GARRPLQRSAPRDTPFGA-RVPAMSXXXXXXXXXXXXXXADAADNSP-HPEPSGGPARA- 81
            G   PL   AP D P  +   P  S                +   SP HP PS GPA A 
Sbjct: 1013 GPSNPLSTQAPCDPPSASSNPPQRSEPSVLPSQGTSASSLSSVTQSPGHPGPSAGPALAN 1072

Query: 80   ----VPHTAGAHRRPPSASL 33
                 P+       PP+A L
Sbjct: 1073 STGSKPNVETEPPAPPAALL 1092

to top

>ENDX_PSEFL (Q9WVZ1) Extracellular endonuclease precursor (EC 3.1.21.-)|
          Length = 229

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/81 (28%), Positives = 32/81 (39%)
 Frame = +1

Query: 187 AGTRAPKGVSLGALRCNGLRAPHPTRLGTRTKESDMRASRRVLKPGMRKEADEREALTGR 366
           A  +AP+  S        L AP  T      K +  R   +      RK A+  +A  G 
Sbjct: 17  AHAQAPRTFSEAKKVAWKLYAPQSTEFYCGCKYNGNRVDLKACGYVPRKNANRADASNGN 76

Query: 367 TAGRP*SSVKGSSWSTPVGTR 429
           T+ RP  S   +S   PVG +
Sbjct: 77  TSSRPGRSGISASAGKPVGAK 97

to top

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
 Frame = -1

Query: 223 PRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPG------ 62
           PRG R  +    P RRR+  +P  P   P  R T    P R      P R  P       
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPP---PRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSP 598

Query: 61  ---RIAGPHPLPSRQ 26
              R   P P P R+
Sbjct: 599 PIQRRYSPSPPPKRR 613

to top

>DDR1_HUMAN (Q08345) Epithelial discoidin domain-containing receptor 1|
           precursor (EC 2.7.10.1) (Epithelial discoidin domain
           receptor 1) (Tyrosine kinase DDR) (Discoidin receptor
           tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell
           adhesion kinase) (TRK E)
          Length = 913

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 33/123 (26%), Positives = 40/123 (32%), Gaps = 2/123 (1%)
 Frame = -1

Query: 403 SNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAV 224
           S P   I +  R GP  PP  Q P      +P                  G P      V
Sbjct: 464 SVPGDTILINNRPGPREPPPYQEP------RP-----------------RGNPPHSAPCV 500

Query: 223 PRGTRL--SARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAG 50
           P G+ L  S   YR         PR PG   P      +T + + D  EP   +PG    
Sbjct: 501 PNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQAYSGDYMEP--EKPGAPLL 558

Query: 49  PHP 41
           P P
Sbjct: 559 PPP 561

to top

>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
            (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
            (SH3P12)
          Length = 1290

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 25/90 (27%), Positives = 36/90 (40%)
 Frame = -1

Query: 334  PCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPR 155
            P   ++ KP+  H  Q P S     S   PAG+ + +P            C   Q +   
Sbjct: 854  PLPFRLKKPLQQHPRQPPPS----DSSESPAGQKADLP------------CHDPQDQPHS 897

Query: 154  APGLWPPTRPTTVHTPSRAADQQEPFRIRP 65
            A     PTR ++ HT +R +   EP   RP
Sbjct: 898  AGKPQVPTRLSSRHTMARLSHNSEPPLDRP 927

to top

>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSAS 36
           SP PEP GG A+  P  AG+   P  A+
Sbjct: 71  SPAPEPRGGKAKRSPSAAGSGGPPTPAA 98

to top

>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSAS 36
           SP PEP GG A+  P  AG+   P  A+
Sbjct: 71  SPAPEPRGGKAKRSPSAAGSGGPPTPAA 98

to top

>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 119 SPHPEPSGGPARAVPHTAGAHRRPPSAS 36
           SP PEP GG A+  P  AG+   P  A+
Sbjct: 71  SPTPEPRGGKAKRSPSAAGSGGPPTPAA 98

to top

>DDR1_PANTR (Q7YR43) Epithelial discoidin domain-containing receptor 1|
           precursor (EC 2.7.10.1) (Epithelial discoidin domain
           receptor 1) (Tyrosine kinase DDR) (Discoidin receptor
           tyrosine kinase) (CD167a antigen)
          Length = 909

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 33/123 (26%), Positives = 40/123 (32%), Gaps = 2/123 (1%)
 Frame = -1

Query: 403 SNPSQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQTPWSVFQDGSDGEPAGRCSAV 224
           S P   I +  R GP  PP  Q P      +P                  G P      V
Sbjct: 460 SVPGDTILINNRPGPREPPPYQEP------RP-----------------RGNPPHSAPCV 496

Query: 223 PRGTRL--SARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQQEPFRIRPGRIAG 50
           P G+ L  S   YR         PR PG   P      +T + + D  EP   +PG    
Sbjct: 497 PNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQAYSGDYMEP--EKPGAPLL 554

Query: 49  PHP 41
           P P
Sbjct: 555 PPP 557

to top

>L_EBOZM (Q05318) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2212

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 323  PGFKTRRLARMSDSLVRVPRRVGWGARRPLQRSAPRDTPFGARVPAMS 180
            P F+ +RL  + D L+R+P   GW   + + +S   D+   +  P  S
Sbjct: 1399 PFFQGKRLNIIEDDLIRLPHLSGWELAKTIMQSIISDSNNSSTDPISS 1446

to top

>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
           (Trio-associated repeat on actin)
          Length = 2365

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
 Frame = -1

Query: 439 SPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCAS---QVSKPVDSHACQTPWSVF 269
           +P  G R   S ++P+Q+              R++P AS   ++++   S A  T   + 
Sbjct: 247 TPHSGPRSTTSQASPAQRDTAQ------AASTREIPRASSPHRITQRDTSRASSTQQEIS 300

Query: 268 QDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTRPTTVHTPSRAADQ 89
           +  S  +   R S+    T  ++       R        P    P+R T +  P  ++ Q
Sbjct: 301 RASSTQQETSRASSTQEDTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQ 360

Query: 88  QE 83
           Q+
Sbjct: 361 QD 362

to top

>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +3

Query: 147 PGALGASGCRRRHGRYPR----AERRVPRGTALQRPAGSPSDPSWNTDQG 284
           PGALG +G   + G   R     ER +P    ++ PAG P  P     +G
Sbjct: 217 PGALGPAGPAGKDGESGRPGRPGERGLPGPPGIKGPAGMPGFPGMKGHRG 266

to top

>ZN319_HUMAN (Q9P2F9) Zinc finger protein 319|
          Length = 582

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
 Frame = -1

Query: 331 CASQVSKPVDSHACQTPWSVF----QDGSDGEPAGRCSAVPRGTRLSARGYRPCRRRQPE 164
           C     KP     C+  +S+     Q  S      +CS       +  + Y+P    +P 
Sbjct: 124 CVQAEQKPFVCGVCKMGFSLLTSLAQHHSSHSGLVKCS-------ICEKTYKPAEAAEPA 176

Query: 163 APRAPGLWPPTRPTTVHTPSRAADQ-------QEPFR 74
              AP L     P+TV TP+  AD+       Q+PF+
Sbjct: 177 TTAAPSLPAAPAPSTV-TPAEQADKPYSCPICQKPFK 212

to top

>CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antigen 5 homolog|
           (cTAGE-5 protein) (Meningioma-expressed antigen 6)
          Length = 779

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
 Frame = -1

Query: 175 RQPEAPRAPG------LWPPTRPTTVHTP------SRAADQQEPFRIRPGRIAGPHPLPS 32
           R  +APRAP        W   R  T H P        A  +Q+ F    GR++GP  L S
Sbjct: 559 RLSDAPRAPSDRSLSPPWEQDRRMTAHPPPGQPYSDPALQRQDRFYPNSGRLSGPAELRS 618

Query: 31  RQFQAL 14
               +L
Sbjct: 619 YNMPSL 624

to top

>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +3

Query: 147 PGALGASGCRRRHGRYPR----AERRVPRGTALQRPAGSPSDPSWNTDQG 284
           PGA+G SG   + G   R     ER +P    ++ PAG P  P     +G
Sbjct: 217 PGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRG 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,958,158
Number of Sequences: 219361
Number of extensions: 1747155
Number of successful extensions: 7646
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 6609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7585
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result