ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet24b09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 652 bits (329), Expect = 0.0 Identities = 434/469 (92%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 1353 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 1412 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 1413 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 1472 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1473 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 1532 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1533 gaaactgttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtc 1592 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 |||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1593 aaacgggagctgcaggagactgtccaatatccagtggagcatcctgagaaatttgagaag 1652 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1653 tttggcatgtctccgtccaaaggtgttctgttctatggccctcctggctgtggtaagact 1712 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 |||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||| Sbjct: 1713 ttgttggccaaggcaattgctaacgagtgccaggctaacttcattagtgtcaagggacct 1772 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1773 gagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgaga 1821
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 652 bits (329), Expect = 0.0 Identities = 434/469 (92%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 1353 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 1412 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 1413 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 1472 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1473 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 1532 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1533 gaaactgttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtc 1592 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 |||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1593 aaacgggagctgcaggagactgtccaatatccagtggagcatcctgagaaatttgagaag 1652 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1653 tttggcatgtctccgtccaaaggtgttctgttctatggccctcctggctgtggtaagact 1712 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 |||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||| Sbjct: 1713 ttgttggccaaggcaattgctaacgagtgccaggctaacttcattagtgtcaagggacct 1772 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1773 gagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgaga 1821
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 652 bits (329), Expect = 0.0 Identities = 434/469 (92%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 1353 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 1412 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 1413 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 1472 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1473 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 1532 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1533 gaaactgttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtc 1592 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 |||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1593 aaacgggagctgcaggagactgtccaatatccagtggagcatcctgagaaatttgagaag 1652 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1653 tttggcatgtctccgtccaaaggtgttctgttctatggccctcctggctgtggtaagact 1712 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 |||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||| Sbjct: 1713 ttgttggccaaggcaattgctaacgagtgccaggctaacttcattagtgtcaagggacct 1772 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1773 gagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgaga 1821
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 652 bits (329), Expect = 0.0 Identities = 434/469 (92%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 1353 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 1412 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 1413 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 1472 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1473 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 1532 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1533 gaaactgttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtc 1592 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 |||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1593 aaacgggagctgcaggagactgtccaatatccagtggagcatcctgagaaatttgagaag 1652 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1653 tttggcatgtctccgtccaaaggtgttctgttctatggccctcctggctgtggtaagact 1712 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 |||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||| Sbjct: 1713 ttgttggccaaggcaattgctaacgagtgccaggctaacttcattagtgtcaagggacct 1772 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1773 gagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgaga 1821
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 652 bits (329), Expect = 0.0 Identities = 434/469 (92%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 1353 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 1412 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 1413 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 1472 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1473 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 1532 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1533 gaaactgttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtc 1592 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 |||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1593 aaacgggagctgcaggagactgtccaatatccagtggagcatcctgagaaatttgagaag 1652 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1653 tttggcatgtctccgtccaaaggtgttctgttctatggccctcctggctgtggtaagact 1712 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 |||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||| Sbjct: 1713 ttgttggccaaggcaattgctaacgagtgccaggctaacttcattagtgtcaagggacct 1772 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1773 gagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgaga 1821
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 652 bits (329), Expect = 0.0 Identities = 434/469 (92%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 1353 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 1412 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 1413 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 1472 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1473 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 1532 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1533 gaaactgttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtc 1592 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 |||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1593 aaacgggagctgcaggagactgtccaatatccagtggagcatcctgagaaatttgagaag 1652 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1653 tttggcatgtctccgtccaaaggtgttctgttctatggccctcctggctgtggtaagact 1712 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 |||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||| Sbjct: 1713 ttgttggccaaggcaattgctaacgagtgccaggctaacttcattagtgtcaagggacct 1772 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1773 gagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgaga 1821
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 565 bits (285), Expect = e-158 Identities = 408/449 (90%) Strand = Plus / Plus Query: 4 gttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaag 63 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 733 gttggtgctgatcttgctgctctttgtactgaggctgctcttcagtgcattcgtgagaag 792 Query: 64 atggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatggct 123 |||||||| |||||||||||||||||||| || ||||| |||||| |||| || |||||| Sbjct: 793 atggacatcatagatcttgaggatgagacaatcgatgcagagatattgaactcgatggct 852 Query: 124 gttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaa 183 |||||||| ||||||||||||||||| || ||||||||||||||||||||| |||||| Sbjct: 853 gttacaaatgaccatttcaagactgcgcttggaacaagcaacccatctgctcttcgtgaa 912 Query: 184 actgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaa 243 |||||||| ||||| || |||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 913 actgttgtcgaagtcccaaatgtctcttgggaggatattggtgggctggagaatgtcaag 972 Query: 244 cgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagttt 303 ||||||| ||||||||||| || || |||||||||||||| ||||| |||||||||||| Sbjct: 973 agggagctccaggagactgttcaatatcctgtggagcatccggagaagttcgagaagttt 1032 Query: 304 ggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttg 363 |||||||| || |||||||| ||| |||||||||| |||||||| ||||||||||||||| Sbjct: 1033 ggcatgtctccatccaaaggagttttgttctatggtcctcctggttgtggtaaaaccttg 1092 Query: 364 ttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgag 423 ||||| ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| Sbjct: 1093 ttggcaaaggcaattgccaacgagtgccaggctaacttcatcagtgtcaagggtcctgag 1152 Query: 424 ctgcttaccatgtggtttggtgagagtga 452 |||||||||||||||||||||||||||| Sbjct: 1153 ttgcttaccatgtggtttggtgagagtga 1181
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence Length = 1794 Score = 525 bits (265), Expect = e-146 Identities = 418/469 (89%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||||||||||||||||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 342 tatgttggtgctgatcttgctgccctttgtactgaagctgctcttcaatgcattcgtgag 401 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||| |||||||| ||||||||||| || ||| Sbjct: 402 aagatggatattatagatcttgaggatgagacaatagatgcggagatactgaactctatg 461 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| |||| || ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 462 gctgtctcaaatgatcatttcaagactgcacttgggacaagcaacccatctgctctgcgt 521 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 522 gaaactgttgttgaagtcccaaatgtctcttgggaagatattggtggtctggaaaatgtt 581 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 || ||||||| ||||||||||| || || || |||||||||||||| ||||| || ||| Sbjct: 582 aagagggagctacaggagactgttcaatatccagtggagcatccagataaatttgaaaag 641 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||||| ||||| || |||||| |||| |||||||||||||| ||||| || || Sbjct: 642 tttggcatgtctccttcgaagggtgttttgttttatggccctcctggctgtggcaagact 701 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 |||||||||||||||||||| ||||| ||||| ||||||||||| ||| | ||||| ||| Sbjct: 702 ttgttggccaaggcaattgccaatgaatgccaagctaacttcattagtgtgaagggtcct 761 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 || |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 762 gaactgcttaccatgtggtttggtgagagtgaggccaatgtccgtgaga 810
>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full insert sequence Length = 1232 Score = 509 bits (257), Expect = e-141 Identities = 344/373 (92%) Strand = Plus / Plus Query: 97 gatgctgagatactgaattccatggctgttacaaacgaccatttcaagactgcactaaca 156 |||||||||||||| || || |||||||||||||| || || ||||||||||||||| Sbjct: 1 gatgctgagatacttaactcgatggctgttacaaatgatcacttcaagactgcactaggg 60 Query: 157 acaagcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaa 216 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 acaagcaacccgtctgctctccgtgaaactgttgttgaagttccaaatgtctcttgggag 120 Query: 217 gatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtg 276 ||||||||||| ||||| |||||||||||||||||||||||||||||||| || || ||| Sbjct: 121 gatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatccagtg 180 Query: 277 gagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctat 336 |||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 181 gagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgttctat 240 Query: 337 ggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggct 396 ||||||||||| |||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 241 ggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgccaggct 300 Query: 397 aacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggct 456 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtgaggcc 360 Query: 457 aatgtgcgtgaga 469 ||||||||||||| Sbjct: 361 aatgtgcgtgaga 373
>gb|BT012783.1| Lycopersicon esculentum clone 113773R, mRNA sequence Length = 2684 Score = 333 bits (168), Expect = 3e-88 Identities = 395/468 (84%), Gaps = 2/468 (0%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||| ||||||||||||||||| || || ||||| || ||||||||| | ||| Sbjct: 1274 tatgtcggtgcagatcttgctgctctttgcactgaagctgcacttcagtgcattagagag 1333 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 || ||||| | || ||||| || ||||| |||| |||||||| ||| ||||||| ||| Sbjct: 1334 aaaatggatgtcattgatctggaagatgattccattgatgctgaaatattgaattcaatg 1393 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| ||||| || || ||| | ||||| ||| ||||||||| |||||||| | ||| Sbjct: 1394 gctgtcacaaatgagcacttccaaactgctctaggaacaagcaatccatctgcattgcgt 1453 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 ||||| ||||||||||| || ||||| || |||||||| ||||| || || ||||||||| Sbjct: 1454 gaaacagttgttgaagtgcctaatgtatcatgggaagacattggaggccttgaaaatgtc 1513 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 ||| | ||||| || |||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 1514 aaaagagagcttcaagagactgttcaataccccgtggagcatccagagaagttcgagaaa 1573 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaac- 359 ||||| ||||| ||||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 1574 tttggtatgtcaccttcaaaaggtgttcttttctatggtcctccgggatgtgggaaaact 1633 Query: 360 cttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacc 419 ||| || ||||||||||||||||||||||| || || || ||||| ||| |||| ||||| Sbjct: 1634 cttctt-gccaaggcaattgcaaatgagtgtcaagccaatttcattagtgtcaaaggacc 1692 Query: 420 tgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtga 467 |||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1693 tgagctgcttaccatgtggtttggagagagtgaggccaatgtccgtga 1740
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 303 bits (153), Expect = 3e-79 Identities = 198/213 (92%) Strand = Plus / Minus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 |||||||||| || || ||||||||||| |||||||| ||||||||||||||||| || | Sbjct: 2835453 agactgtccaatatccagtggagcatcctgagaaatttgagaagtttggcatgtctccgt 2835394 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 2835393 ccaaaggtgttctgttctatggccctcctggctgtggtaagactttgttggccaaggcaa 2835334 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 2835333 ttgctaacgagtgccaggctaacttcattagtgtcaagggacctgagctgcttaccatgt 2835274 Query: 437 ggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||| ||||||||||||| Sbjct: 2835273 ggtttggtgagagtgaggccaatgtgcgtgaga 2835241 Score = 246 bits (124), Expect = 6e-62 Identities = 172/188 (91%) Strand = Plus / Minus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 2835872 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 2835813 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 2835812 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 2835753 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2835752 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 2835693 Query: 181 gaaactgt 188 |||||||| Sbjct: 2835692 gaaactgt 2835685 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 |||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 2835594 gttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtcaaacgg 2835535 Query: 247 gagctgcaggag 258 |||||||||||| Sbjct: 2835534 gagctgcaggag 2835523
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 303 bits (153), Expect = 3e-79 Identities = 198/213 (92%) Strand = Plus / Minus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 |||||||||| || || ||||||||||| |||||||| ||||||||||||||||| || | Sbjct: 2835564 agactgtccaatatccagtggagcatcctgagaaatttgagaagtttggcatgtctccgt 2835505 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 2835504 ccaaaggtgttctgttctatggccctcctggctgtggtaagactttgttggccaaggcaa 2835445 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 2835444 ttgctaacgagtgccaggctaacttcattagtgtcaagggacctgagctgcttaccatgt 2835385 Query: 437 ggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||| ||||||||||||| Sbjct: 2835384 ggtttggtgagagtgaggccaatgtgcgtgaga 2835352 Score = 246 bits (124), Expect = 6e-62 Identities = 172/188 (91%) Strand = Plus / Minus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 2835983 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 2835924 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 2835923 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 2835864 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2835863 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 2835804 Query: 181 gaaactgt 188 |||||||| Sbjct: 2835803 gaaactgt 2835796 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 |||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 2835705 gttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtcaaacgg 2835646 Query: 247 gagctgcaggag 258 |||||||||||| Sbjct: 2835645 gagctgcaggag 2835634
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 303 bits (153), Expect = 3e-79 Identities = 198/213 (92%) Strand = Plus / Minus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 |||||||||| || || ||||||||||| |||||||| ||||||||||||||||| || | Sbjct: 107409 agactgtccaatatccagtggagcatcctgagaaatttgagaagtttggcatgtctccgt 107350 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 107349 ccaaaggtgttctgttctatggccctcctggctgtggtaagactttgttggccaaggcaa 107290 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 107289 ttgctaacgagtgccaggctaacttcattagtgtcaagggacctgagctgcttaccatgt 107230 Query: 437 ggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||||||||||| ||||||||||||| Sbjct: 107229 ggtttggtgagagtgaggccaatgtgcgtgaga 107197 Score = 246 bits (124), Expect = 6e-62 Identities = 172/188 (91%) Strand = Plus / Minus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 107828 tatgtgggtgctgatcttgctgctctttgcactgaggctgctctccaatgcatccgtgag 107769 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 107768 aagatggatattatagatcttgaggatgagaccatagatgctgagatacttaactcgatg 107709 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 107708 gctgttacaaatgatcacttcaagactgcactagggacaagcaacccgtctgctctccgt 107649 Query: 181 gaaactgt 188 |||||||| Sbjct: 107648 gaaactgt 107641 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 |||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 107550 gttgttgaagttccaaatgtctcttgggaggatattggtggactggagaatgtcaaacgg 107491 Query: 247 gagctgcaggag 258 |||||||||||| Sbjct: 107490 gagctgcaggag 107479
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 281 bits (142), Expect = 1e-72 Identities = 229/258 (88%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| Sbjct: 1234 tatgttggtgctgatcttgctgccctttgcactgaggctgctcttcagtgcattcgtgag 1293 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| || |||||||||||||| ||||| ||||||||||||||| |||| || ||| Sbjct: 1294 aagatggatatcatagatcttgaggacgagacaatagatgctgagatattgaactcgatg 1353 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| ||||| ||||||||||| || || || |||||||||||||||||||| ||| Sbjct: 1354 gctgtcacaaatgaccatttcaaaaccgcgcttggtacaagcaacccatctgctcttcgt 1413 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 |||||||||||||||||||| |||||||| ||||| || |||||||| ||||| |||||| Sbjct: 1414 gaaactgttgttgaagttcctaatgtctcatgggaggacattggtgggctggagaatgtc 1473 Query: 241 aaacgggagctgcaggag 258 || |||||||||||||| Sbjct: 1474 aagagggagctgcaggag 1491 Score = 248 bits (125), Expect = 1e-62 Identities = 191/213 (89%) Strand = Plus / Plus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 1517 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 1576 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1577 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 1636 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 1637 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 1696 Query: 437 ggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||| |||||||| |||||||| ||||||| Sbjct: 1697 ggtttggagagagtgaagctaatgttcgtgaga 1729
>gb|DQ359725.1| Glycine max plamsma membrane-associated AAA-ATPase mRNA, complete cds Length = 2628 Score = 264 bits (133), Expect = 2e-67 Identities = 379/461 (82%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 |||||||||||||| |||||||| ||||| || || |||||| | || |||||| | ||| Sbjct: 1276 tatgttggtgctgaccttgctgccctttgcactgaagctgctttgcaatgcattagggag 1335 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| | || || | ||||||||||| || ||||| || |||||||||||||| Sbjct: 1336 aagatggatgtaattgacttggaggatgagactattgatgcagaagtactgaattccatg 1395 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 || |||||||| || |||||| ||||||| || ||||||||||||||| ||| | ||| Sbjct: 1396 gcagttacaaatgagcatttccagactgcccttggaacaagcaacccatcagctttacgt 1455 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 ||||||||||||||||| || |||||| |||||||| ||||| || || ||||||||| Sbjct: 1456 gaaactgttgttgaagtgcctaatgtcagctgggaagacattggaggccttgaaaatgtc 1515 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 || || || ||||| |||||||| || || || || ||||| ||||| || || |||||| Sbjct: 1516 aagcgtgaactgcaagagactgtacaatatccagttgagcacccagaaaagtttgagaag 1575 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||| ||||| || || ||||| || || |||||||| ||||| |||||||| ||||| Sbjct: 1576 tttggtatgtctccatctaaaggagtacttttctatggtcctccaggatgtgggaaaact 1635 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 ||||| ||||| |||||||| ||||| || || ||||||||||||||| | || || || Sbjct: 1636 ttgttagccaaagcaattgctaatgaatgtcaagctaacttcatcagtgtgaaaggtcca 1695 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 || ||||||| |||||||||||||| ||||| |||||||| Sbjct: 1696 gaattgcttacaatgtggtttggtgaaagtgaagctaatgt 1736
>gb|U20213.1|GMU20213 Glycine max valosin-containing protein mRNA, complete cds Length = 2654 Score = 264 bits (133), Expect = 2e-67 Identities = 379/461 (82%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 |||||||||||||| |||||||| ||||| || || |||||| | || |||||| | ||| Sbjct: 1296 tatgttggtgctgaccttgctgccctttgcactgaagctgctttgcaatgcattagggag 1355 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| | || || | ||||||||||| || ||||| || |||||||||||||| Sbjct: 1356 aagatggatgtaattgacttggaggatgagactattgatgcagaagtactgaattccatg 1415 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 || |||||||| || |||||| ||||||| || ||||||||||||||| ||| | ||| Sbjct: 1416 gcagttacaaatgagcatttccagactgcccttggaacaagcaacccatcagctttacgt 1475 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 ||||||||||||||||| || |||||| |||||||| ||||| || || ||||||||| Sbjct: 1476 gaaactgttgttgaagtgcctaatgtcagctgggaagacattggaggccttgaaaatgtc 1535 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 || || || ||||| |||||||| || || || || ||||| ||||| || || |||||| Sbjct: 1536 aagcgtgaactgcaagagactgtacaatatccagttgagcacccagaaaagtttgagaag 1595 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||| ||||| || || ||||| || || |||||||| ||||| |||||||| ||||| Sbjct: 1596 tttggtatgtctccatctaaaggagtacttttctatggtcctccaggatgtgggaaaact 1655 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 ||||| ||||| |||||||| ||||| || || ||||||||||||||| | || || || Sbjct: 1656 ttgttagccaaagcaattgctaatgaatgtcaagctaacttcatcagtgtgaaaggtcca 1715 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 || ||||||| |||||||||||||| ||||| |||||||| Sbjct: 1716 gaattgcttacaatgtggtttggtgaaagtgaagctaatgt 1756
>gb|BT014585.1| Lycopersicon esculentum clone 134043F, mRNA sequence Length = 2708 Score = 252 bits (127), Expect = 9e-64 Identities = 382/467 (81%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 |||||||| || ||||||||||||||||| || || |||||||| ||||||||| | ||| Sbjct: 1299 tatgttggggcagatcttgctgctctttgcactgaagctgctcttcagtgcattagggag 1358 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| | || ||||| || ||||| ||||| ||||||||| | |||| || ||| Sbjct: 1359 aagatggatgtcattgatctggaagatgacaccattgatgctgaggtgttgaactcaatg 1418 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 || || ||||| || || ||| | ||||| || |||||||| |||||||| | ||| Sbjct: 1419 gcagtaacaaatgagcacttccaaactgctctcggtacaagcaatccatctgcattgcgt 1478 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 ||||| || |||||||| || |||||||| ||| |||| ||||| || || |||||||| Sbjct: 1479 gaaacagtggttgaagtgcctaatgtctcatggcaagacattggaggccttgaaaatgtt 1538 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 || || ||||| || |||||||| || || || ||||| || |||||||| || |||||| Sbjct: 1539 aagcgagagcttcaagagactgttcaatatccagtggaacacccagagaagtttgagaag 1598 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||| ||||| ||||| |||||||| || |||||||| || || |||||||| |||||| Sbjct: 1599 tttggtatgtcaccttcgaaaggtgtacttttctatggtcccccaggatgtgggaaaacc 1658 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 | | |||||||||||||||||||| || || ||||| || |||||| |||| |||||| Sbjct: 1659 ctacttgccaaggcaattgcaaatgaatgtcaagctaattttatcagtgtcaaaggacct 1718 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtga 467 || ||||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1719 gaactgctcaccatgtggtttggagagagtgaggcgaatgttcgtga 1765
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 248 bits (125), Expect = 1e-62 Identities = 251/293 (85%) Strand = Plus / Plus Query: 160 agcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagat 219 ||||||||||| || || |||||||||||||| || ||||| |||||||| ||||| ||| Sbjct: 1479 agcaacccatccgcccttcgtgaaactgttgtggaggttccaaatgtctcctgggaggat 1538 Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||| ||||| || ||||| || | ||||| ||||||||||| || |||||||||||| Sbjct: 1539 attggaggtctcgagaatgttaagagagagcttcaggagactgttcaataccctgtggag 1598 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 |||||||||||||||||||||||||| ||||| || || || || ||||| ||||| || Sbjct: 1599 catccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttttctacggt 1658 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| || ||| Sbjct: 1659 cctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgccaagcaaac 1718 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtga 452 ||||||||| |||||||||| ||||| || || ||||||||||| || ||||| Sbjct: 1719 ttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtga 1771
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 248 bits (125), Expect = 1e-62 Identities = 251/293 (85%) Strand = Plus / Minus Query: 160 agcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagat 219 ||||||||||| || || |||||||||||||| || ||||| |||||||| ||||| ||| Sbjct: 25057 agcaacccatccgcccttcgtgaaactgttgtggaggttccaaatgtctcctgggaggat 24998 Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||| ||||| || ||||| || | ||||| ||||||||||| || |||||||||||| Sbjct: 24997 attggaggtctcgagaatgttaagagagagcttcaggagactgttcaataccctgtggag 24938 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 |||||||||||||||||||||||||| ||||| || || || || ||||| ||||| || Sbjct: 24937 catccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttttctacggt 24878 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| || ||| Sbjct: 24877 cctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgccaagcaaac 24818 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtga 452 ||||||||| |||||||||| ||||| || || ||||||||||| || ||||| Sbjct: 24817 ttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtga 24765
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 248 bits (125), Expect = 1e-62 Identities = 251/293 (85%) Strand = Plus / Plus Query: 160 agcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagat 219 ||||||||||| || || |||||||||||||| || ||||| |||||||| ||||| ||| Sbjct: 1384 agcaacccatccgcccttcgtgaaactgttgtggaggttccaaatgtctcctgggaggat 1443 Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||| ||||| || ||||| || | ||||| ||||||||||| || |||||||||||| Sbjct: 1444 attggaggtctcgagaatgttaagagagagcttcaggagactgttcaataccctgtggag 1503 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 |||||||||||||||||||||||||| ||||| || || || || ||||| ||||| || Sbjct: 1504 catccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttttctacggt 1563 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| || ||| Sbjct: 1564 cctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgccaagcaaac 1623 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtga 452 ||||||||| |||||||||| ||||| || || ||||||||||| || ||||| Sbjct: 1624 ttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtga 1676
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 248 bits (125), Expect = 1e-62 Identities = 191/213 (89%) Strand = Plus / Plus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 15400125 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 15400184 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 15400185 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 15400244 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 15400245 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 15400304 Query: 437 ggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||| |||||||| |||||||| ||||||| Sbjct: 15400305 ggtttggagagagtgaagctaatgttcgtgaga 15400337 Score = 206 bits (104), Expect = 5e-50 Identities = 167/188 (88%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| Sbjct: 15399686 tatgttggtgctgatcttgctgccctttgcactgaggctgctcttcagtgcattcgtgag 15399745 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| || |||||||||||||| ||||| ||||||||||||||| |||| || ||| Sbjct: 15399746 aagatggatatcatagatcttgaggacgagacaatagatgctgagatattgaactcgatg 15399805 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| ||||| ||||||||||| || || || |||||||||||||||||||| ||| Sbjct: 15399806 gctgtcacaaatgaccatttcaaaaccgcgcttggtacaagcaacccatctgctcttcgt 15399865 Query: 181 gaaactgt 188 |||||||| Sbjct: 15399866 gaaactgt 15399873 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 |||||||||||||| |||||||| ||||| || |||||||| ||||| |||||||| || Sbjct: 15399961 gttgttgaagttcctaatgtctcatgggaggacattggtgggctggagaatgtcaagagg 15400020 Query: 247 gagctgcaggag 258 |||||||||||| Sbjct: 15400021 gagctgcaggag 15400032
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 248 bits (125), Expect = 1e-62 Identities = 191/213 (89%) Strand = Plus / Plus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 117488 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 117547 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 117548 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 117607 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 117608 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 117667 Query: 437 ggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||| |||||||| |||||||| ||||||| Sbjct: 117668 ggtttggagagagtgaagctaatgttcgtgaga 117700 Score = 206 bits (104), Expect = 5e-50 Identities = 167/188 (88%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| Sbjct: 117049 tatgttggtgctgatcttgctgccctttgcactgaggctgctcttcagtgcattcgtgag 117108 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| || |||||||||||||| ||||| ||||||||||||||| |||| || ||| Sbjct: 117109 aagatggatatcatagatcttgaggacgagacaatagatgctgagatattgaactcgatg 117168 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| ||||| ||||||||||| || || || |||||||||||||||||||| ||| Sbjct: 117169 gctgtcacaaatgaccatttcaaaaccgcgcttggtacaagcaacccatctgctcttcgt 117228 Query: 181 gaaactgt 188 |||||||| Sbjct: 117229 gaaactgt 117236 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 |||||||||||||| |||||||| ||||| || |||||||| ||||| |||||||| || Sbjct: 117324 gttgttgaagttcctaatgtctcatgggaggacattggtgggctggagaatgtcaagagg 117383 Query: 247 gagctgcaggag 258 |||||||||||| Sbjct: 117384 gagctgcaggag 117395
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 248 bits (125), Expect = 1e-62 Identities = 251/293 (85%) Strand = Plus / Plus Query: 160 agcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagat 219 ||||||||||| || || |||||||||||||| || ||||| |||||||| ||||| ||| Sbjct: 1479 agcaacccatccgcccttcgtgaaactgttgtggaggttccaaatgtctcctgggaggat 1538 Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||| ||||| || ||||| || | ||||| ||||||||||| || |||||||||||| Sbjct: 1539 attggaggtctcgagaatgttaagagagagcttcaggagactgttcaataccctgtggag 1598 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 |||||||||||||||||||||||||| ||||| || || || || ||||| ||||| || Sbjct: 1599 catccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttttctacggt 1658 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| || ||| Sbjct: 1659 cctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgccaagcaaac 1718 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtga 452 ||||||||| |||||||||| ||||| || || ||||||||||| || ||||| Sbjct: 1719 ttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtga 1771
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 248 bits (125), Expect = 1e-62 Identities = 251/293 (85%) Strand = Plus / Plus Query: 160 agcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagat 219 ||||||||||| || || |||||||||||||| || ||||| |||||||| ||||| ||| Sbjct: 1472 agcaacccatccgcccttcgtgaaactgttgtggaggttccaaatgtctcctgggaggat 1531 Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||| ||||| || ||||| || | ||||| ||||||||||| || |||||||||||| Sbjct: 1532 attggaggtctcgagaatgttaagagagagcttcaggagactgttcaataccctgtggag 1591 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 |||||||||||||||||||||||||| ||||| || || || || ||||| ||||| || Sbjct: 1592 catccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttttctacggt 1651 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| || ||| Sbjct: 1652 cctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgccaagcaaac 1711 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtga 452 ||||||||| |||||||||| ||||| || || ||||||||||| || ||||| Sbjct: 1712 ttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtga 1764
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 248 bits (125), Expect = 1e-62 Identities = 191/213 (89%) Strand = Plus / Plus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 15408366 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 15408425 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 15408426 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 15408485 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 15408486 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 15408545 Query: 437 ggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||| |||||||| |||||||| ||||||| Sbjct: 15408546 ggtttggagagagtgaagctaatgttcgtgaga 15408578 Score = 206 bits (104), Expect = 5e-50 Identities = 167/188 (88%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| Sbjct: 15407927 tatgttggtgctgatcttgctgccctttgcactgaggctgctcttcagtgcattcgtgag 15407986 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| || |||||||||||||| ||||| ||||||||||||||| |||| || ||| Sbjct: 15407987 aagatggatatcatagatcttgaggacgagacaatagatgctgagatattgaactcgatg 15408046 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| ||||| ||||||||||| || || || |||||||||||||||||||| ||| Sbjct: 15408047 gctgtcacaaatgaccatttcaaaaccgcgcttggtacaagcaacccatctgctcttcgt 15408106 Query: 181 gaaactgt 188 |||||||| Sbjct: 15408107 gaaactgt 15408114 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 |||||||||||||| |||||||| ||||| || |||||||| ||||| |||||||| || Sbjct: 15408202 gttgttgaagttcctaatgtctcatgggaggacattggtgggctggagaatgtcaagagg 15408261 Query: 247 gagctgcaggag 258 |||||||||||| Sbjct: 15408262 gagctgcaggag 15408273
>ref|NM_115183.2| Arabidopsis thaliana ATP binding / hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G53230 mRNA, complete cds Length = 2672 Score = 210 bits (106), Expect = 3e-51 Identities = 373/462 (80%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 |||||||||||||||||||| || | || || || ||||||||||| |||||| | ||| Sbjct: 1269 tatgttggtgctgatcttgcagcattatgcactgaagctgctctccaatgcattagggag 1328 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| | || || || || || ||| ||||||||||| || || ||||| ||| Sbjct: 1329 aagatggatgtaattgacctagatgacgaggagatagatgctgaaattctcaattctatg 1388 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| | || || |||||| ||||||| || | ||||| || || ||||| ||| Sbjct: 1389 gctgtcagtaatgatcatttccagactgcccttggtaacagcaatccttcagctctacgt 1448 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 || ||||| ||||| || || ||||| |||||||| || ||||||||||| || |||||| Sbjct: 1449 gagactgtcgttgaggtgcctaatgtgtcttgggaggacattggtggtcttgagaatgtc 1508 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 || ||||||| || |||||||| || || || ||||||||||| ||||||||||||||| Sbjct: 1509 aagagggagctccaagagactgttcaatatccagtggagcatcctgagaaattcgagaag 1568 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||| ||||| || || ||||| || || ||||||||||| ||||| ||||| || ||| Sbjct: 1569 tttgggatgtcaccgtctaaaggagtcctattctatggcccccctggttgtggaaagacc 1628 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 | ||||| ||||| ||||| || ||||| || || |||||||| ||||||||||| ||| Sbjct: 1629 ctcttggctaaggctattgcgaacgagtgtcaagccaacttcattagtatcaagggtcct 1688 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtg 462 ||||| || || ||||||||||| |||||||| || |||||| Sbjct: 1689 gagctcctcacaatgtggtttggagagagtgaagccaatgtg 1730
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 210 bits (106), Expect = 3e-51 Identities = 373/462 (80%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 |||||||||||||||||||| || | || || || ||||||||||| |||||| | ||| Sbjct: 49243 tatgttggtgctgatcttgcagcattatgcactgaagctgctctccaatgcattagggag 49302 Query: 61 aagatggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatg 120 |||||||| | || || || || || ||| ||||||||||| || || ||||| ||| Sbjct: 49303 aagatggatgtaattgacctagatgacgaggagatagatgctgaaattctcaattctatg 49362 Query: 121 gctgttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgt 180 ||||| | || || |||||| ||||||| || | ||||| || || ||||| ||| Sbjct: 49363 gctgtcagtaatgatcatttccagactgcccttggtaacagcaatccttcagctctacgt 49422 Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtc 240 || ||||| ||||| || || ||||| |||||||| || ||||||||||| || |||||| Sbjct: 49423 gagactgtcgttgaggtgcctaatgtgtcttgggaggacattggtggtcttgagaatgtc 49482 Query: 241 aaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaag 300 || ||||||| || |||||||| || || || ||||||||||| ||||||||||||||| Sbjct: 49483 aagagggagctccaagagactgttcaatatccagtggagcatcctgagaaattcgagaag 49542 Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||| ||||| || || ||||| || || ||||||||||| ||||| ||||| || ||| Sbjct: 49543 tttgggatgtcaccgtctaaaggagtcctattctatggcccccctggttgtggaaagacc 49602 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 | ||||| ||||| ||||| || ||||| || || |||||||| ||||||||||| ||| Sbjct: 49603 ctcttggctaaggctattgcgaacgagtgtcaagccaacttcattagtatcaagggtcct 49662 Query: 421 gagctgcttaccatgtggtttggtgagagtgaggctaatgtg 462 ||||| || || ||||||||||| |||||||| || |||||| Sbjct: 49663 gagctcctcacaatgtggtttggagagagtgaagccaatgtg 49704
>emb|Y09396.1|CACAFP C.annuum mRNA for CDC48p-like protein Length = 2682 Score = 206 bits (104), Expect = 5e-50 Identities = 374/464 (80%) Strand = Plus / Plus Query: 4 gttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaag 63 |||||||| |||||||| ||||| || || || ||||| || ||||||||| | ||||| Sbjct: 1267 gttggtgcagatcttgccgctctctgcacggaagctgcacttcagtgcattagggagaaa 1326 Query: 64 atggacattatagatcttgaggatgagaccatagatgctgagatactgaattccatggct 123 ||||| | | ||||| || ||||| || || ||||||||| | |||| || |||||| Sbjct: 1327 atggatgtacttgatctggaagatgacactattgatgctgaggtgttgaactcaatggct 1386 Query: 124 gttacaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaa 183 || ||||| || || ||| | ||||| || |||||||| || ||||| | |||||| Sbjct: 1387 gtaacaaatgagcacttccaaactgctctcggtacaagcaatccgtctgcattgcgtgaa 1446 Query: 184 actgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaa 243 || || |||||||| || ||||| || |||||||| ||||| || || |||||||||||| Sbjct: 1447 acagtggttgaagtgcctaatgtttcatgggaagacattggaggccttgaaaatgtcaaa 1506 Query: 244 cgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagttt 303 || ||||| || |||||||| || || || ||||| | |||||||| || ||||||||| Sbjct: 1507 cgagagcttcaagagactgttcaatatccagtggaacccccagagaagtttgagaagttt 1566 Query: 304 ggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttg 363 || ||||| ||||| |||||||| || |||||||| || || |||||||| ||||| | Sbjct: 1567 ggtatgtcaccttcgaaaggtgtacttttctatggtcccccaggatgtgggaaaactcta 1626 Query: 364 ttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgag 423 | |||||||||||||||||||| || || || || ||||||||| |||| |||||||| Sbjct: 1627 cttgccaaggcaattgcaaatgaatgtcaagccaatttcatcagtgtcaaaggacctgaa 1686 Query: 424 ctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtga 467 ||||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1687 ctgctcaccatgtggtttggagagagtgaggcgaatgttcgtga 1730
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 200 bits (101), Expect = 3e-48 Identities = 371/461 (80%) Strand = Plus / Plus Query: 7 ggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaagatg 66 |||||||||||||| ||| | || || ||||| || || || ||||| | ||||||||| Sbjct: 1385 ggtgctgatcttgcagctttgtgcacagaggccgccctgcaatgcatcagggagaagatg 1444 Query: 67 gacattatagatcttgaggatgagaccatagatgctgagatactgaattccatggctgtt 126 || | || ||||| || ||||| ||||||| ||||| || || ||||||||||| || Sbjct: 1445 gatgtgattgatctggaagatgactccatagacgctgaaatcctcaattccatggcagtc 1504 Query: 127 acaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaaact 186 || || || |||||| | ||||| || | |||||||||||||| || ||||||||| Sbjct: 1505 actaatgaacatttccacactgctctcgggaacagcaacccatctgcacttcgtgaaact 1564 Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 ||||| || |||||||| ||||||||| | |||||||| ||||| || |||||||| | Sbjct: 1565 gttgtggaggttcccaacgtctcttggaatgatattggaggtcttgagaatgtcaagaga 1624 Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 ||||| ||||||||||| || ||||| || ||||| |||||||| || ||||| || || Sbjct: 1625 gagctccaggagactgttcaatacccagtcgagcacccagagaagtttgagaaattcggg 1684 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||||| || || || || || || ||||| || |||||||||||||| |||||| | ||| Sbjct: 1685 atgtctccatcaaagggagtccttttctacggtcctcctggatgtgggaaaacccttttg 1744 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 ||||| || ||||| || |||||||| ||||| ||||||||| ||||||| || ||||| Sbjct: 1745 gccaaagctattgccaacgagtgccaagctaatttcatcagtgtcaagggtcccgagctt 1804 Query: 427 cttaccatgtggtttggtgagagtgaggctaatgtgcgtga 467 || || ||||||||||| |||||||| || ||||| ||||| Sbjct: 1805 ctgacaatgtggtttggagagagtgaagcaaatgttcgtga 1845
>gb|BC060518.1| Rattus norvegicus valosin-containing protein, mRNA (cDNA clone MGC:72335 IMAGE:5597843), complete cds Length = 3214 Score = 200 bits (101), Expect = 3e-48 Identities = 239/285 (83%) Strand = Plus / Plus Query: 159 aagcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaaga 218 |||||||||||| || || || |||||||| || ||||| || | || | |||||||| Sbjct: 1585 aagcaacccatcagcacttcgggaaactgtggtagaagtgccacaagtaacctgggaaga 1644 Query: 219 tattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtgga 278 ||||| || ||||| |||||||||||||||| |||||| || ||||| |||||||| Sbjct: 1645 cattggaggcctggaggatgtcaaacgggagcttcaggagttggttcagtatcctgtgga 1704 Query: 279 gcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatgg 338 ||||||||| |||||| || ||||||||| | ||||||||||||||||| |||||||| Sbjct: 1705 gcatccagacaaattcctcaaatttggcatgactccttccaaaggtgttcttttctatgg 1764 Query: 339 ccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaa 398 || ||||| ||||| |||||||| ||||||| || ||||| ||||| ||||||||||| Sbjct: 1765 accgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgccaggctaa 1824 Query: 399 cttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1825 cttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1869
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 200 bits (101), Expect = 3e-48 Identities = 371/461 (80%) Strand = Plus / Plus Query: 7 ggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaagatg 66 |||||||||||||| ||| | || || ||||| || || || ||||| | ||||||||| Sbjct: 1341 ggtgctgatcttgcagctttgtgcacagaggccgccctgcaatgcatcagggagaagatg 1400 Query: 67 gacattatagatcttgaggatgagaccatagatgctgagatactgaattccatggctgtt 126 || | || ||||| || ||||| ||||||| ||||| || || ||||||||||| || Sbjct: 1401 gatgtgattgatctggaagatgactccatagacgctgaaatcctcaattccatggcagtc 1460 Query: 127 acaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaaact 186 || || || |||||| | ||||| || | |||||||||||||| || ||||||||| Sbjct: 1461 actaatgaacatttccacactgctctcgggaacagcaacccatctgcacttcgtgaaact 1520 Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 ||||| || |||||||| ||||||||| | |||||||| ||||| || |||||||| | Sbjct: 1521 gttgtggaggttcccaacgtctcttggaatgatattggaggtcttgagaatgtcaagaga 1580 Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 ||||| ||||||||||| || ||||| || ||||| |||||||| || ||||| || || Sbjct: 1581 gagctccaggagactgttcaatacccagtcgagcacccagagaagtttgagaaattcggg 1640 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||||| || || || || || || ||||| || |||||||||||||| |||||| | ||| Sbjct: 1641 atgtctccatcaaagggagtccttttctacggtcctcctggatgtgggaaaacccttttg 1700 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 ||||| || ||||| || |||||||| ||||| ||||||||| ||||||| || ||||| Sbjct: 1701 gccaaagctattgccaacgagtgccaagctaatttcatcagtgtcaagggtcccgagctt 1760 Query: 427 cttaccatgtggtttggtgagagtgaggctaatgtgcgtga 467 || || ||||||||||| |||||||| || ||||| ||||| Sbjct: 1761 ctgacaatgtggtttggagagagtgaagcaaatgttcgtga 1801
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 200 bits (101), Expect = 3e-48 Identities = 371/461 (80%) Strand = Plus / Plus Query: 7 ggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaagatg 66 |||||||||||||| ||| | || || ||||| || || || ||||| | ||||||||| Sbjct: 1375 ggtgctgatcttgcagctttgtgcacagaggccgccctgcaatgcatcagggagaagatg 1434 Query: 67 gacattatagatcttgaggatgagaccatagatgctgagatactgaattccatggctgtt 126 || | || ||||| || ||||| ||||||| ||||| || || ||||||||||| || Sbjct: 1435 gatgtgattgatctggaagatgactccatagacgctgaaatcctcaattccatggcagtc 1494 Query: 127 acaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaaact 186 || || || |||||| | ||||| || | |||||||||||||| || ||||||||| Sbjct: 1495 actaatgaacatttccacactgctctcgggaacagcaacccatctgcacttcgtgaaact 1554 Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 ||||| || |||||||| ||||||||| | |||||||| ||||| || |||||||| | Sbjct: 1555 gttgtggaggttcccaacgtctcttggaatgatattggaggtcttgagaatgtcaagaga 1614 Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 ||||| ||||||||||| || ||||| || ||||| |||||||| || ||||| || || Sbjct: 1615 gagctccaggagactgttcaatacccagtcgagcacccagagaagtttgagaaattcggg 1674 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||||| || || || || || || ||||| || |||||||||||||| |||||| | ||| Sbjct: 1675 atgtctccatcaaagggagtccttttctacggtcctcctggatgtgggaaaacccttttg 1734 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 ||||| || ||||| || |||||||| ||||| ||||||||| ||||||| || ||||| Sbjct: 1735 gccaaagctattgccaacgagtgccaagctaatttcatcagtgtcaagggtcccgagctt 1794 Query: 427 cttaccatgtggtttggtgagagtgaggctaatgtgcgtga 467 || || ||||||||||| |||||||| || ||||| ||||| Sbjct: 1795 ctgacaatgtggtttggagagagtgaagcaaatgttcgtga 1835
>gb|U11760.1|RNU11760 Rattus norvegicus transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2870 Score = 200 bits (101), Expect = 3e-48 Identities = 239/285 (83%) Strand = Plus / Plus Query: 159 aagcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaaga 218 |||||||||||| || || || |||||||| || ||||| || | || | |||||||| Sbjct: 1617 aagcaacccatcagcacttcgggaaactgtggtagaagtgccacaagtaacctgggaaga 1676 Query: 219 tattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtgga 278 ||||| || ||||| |||||||||||||||| |||||| || ||||| |||||||| Sbjct: 1677 cattggaggcctggaggatgtcaaacgggagcttcaggagttggttcagtatcctgtgga 1736 Query: 279 gcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatgg 338 ||||||||| |||||| || ||||||||| | ||||||||||||||||| |||||||| Sbjct: 1737 gcatccagacaaattcctcaaatttggcatgactccttccaaaggtgttcttttctatgg 1796 Query: 339 ccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaa 398 || ||||| ||||| |||||||| ||||||| || ||||| ||||| ||||||||||| Sbjct: 1797 accgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgccaggctaa 1856 Query: 399 cttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1857 cttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1901
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 200 bits (101), Expect = 3e-48 Identities = 371/461 (80%) Strand = Plus / Plus Query: 7 ggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaagatg 66 |||||||||||||| ||| | || || ||||| || || || ||||| | ||||||||| Sbjct: 1324 ggtgctgatcttgcagctttgtgcacagaggccgccctgcaatgcatcagggagaagatg 1383 Query: 67 gacattatagatcttgaggatgagaccatagatgctgagatactgaattccatggctgtt 126 || | || ||||| || ||||| ||||||| ||||| || || ||||||||||| || Sbjct: 1384 gatgtgattgatctggaagatgactccatagacgctgaaatcctcaattccatggcagtc 1443 Query: 127 acaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaaact 186 || || || |||||| | ||||| || | |||||||||||||| || ||||||||| Sbjct: 1444 actaatgaacatttccacactgctctcgggaacagcaacccatctgcacttcgtgaaact 1503 Query: 187 gttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacgg 246 ||||| || |||||||| ||||||||| | |||||||| ||||| || |||||||| | Sbjct: 1504 gttgtggaggttcccaacgtctcttggaatgatattggaggtcttgagaatgtcaagaga 1563 Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 ||||| ||||||||||| || ||||| || ||||| |||||||| || ||||| || || Sbjct: 1564 gagctccaggagactgttcaatacccagtcgagcacccagagaagtttgagaaattcggg 1623 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||||| || || || || || || ||||| || |||||||||||||| |||||| | ||| Sbjct: 1624 atgtctccatcaaagggagtccttttctacggtcctcctggatgtgggaaaacccttttg 1683 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 ||||| || ||||| || |||||||| ||||| ||||||||| ||||||| || ||||| Sbjct: 1684 gccaaagctattgccaacgagtgccaagctaatttcatcagtgtcaagggtcccgagctt 1743 Query: 427 cttaccatgtggtttggtgagagtgaggctaatgtgcgtga 467 || || ||||||||||| |||||||| || ||||| ||||| Sbjct: 1744 ctgacaatgtggtttggagagagtgaagcaaatgttcgtga 1784
>ref|NM_053864.2| Rattus norvegicus valosin-containing protein (Vcp), mRNA Length = 3214 Score = 200 bits (101), Expect = 3e-48 Identities = 239/285 (83%) Strand = Plus / Plus Query: 159 aagcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaaga 218 |||||||||||| || || || |||||||| || ||||| || | || | |||||||| Sbjct: 1585 aagcaacccatcagcacttcgggaaactgtggtagaagtgccacaagtaacctgggaaga 1644 Query: 219 tattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtgga 278 ||||| || ||||| |||||||||||||||| |||||| || ||||| |||||||| Sbjct: 1645 cattggaggcctggaggatgtcaaacgggagcttcaggagttggttcagtatcctgtgga 1704 Query: 279 gcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatgg 338 ||||||||| |||||| || ||||||||| | ||||||||||||||||| |||||||| Sbjct: 1705 gcatccagacaaattcctcaaatttggcatgactccttccaaaggtgttcttttctatgg 1764 Query: 339 ccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaa 398 || ||||| ||||| |||||||| ||||||| || ||||| ||||| ||||||||||| Sbjct: 1765 accgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgccaggctaa 1824 Query: 399 cttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1825 cttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1869
>gb|BC007562.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:2988964), partial cds Length = 2537 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 966 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1025 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1026 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1085 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1086 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1145 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1146 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 1191
>gb|BC023563.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:4422977), **** WARNING: chimeric clone **** Length = 5159 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 3584 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 3643 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 3644 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 3703 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 3704 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 3763 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 3764 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 3809
>gb|BC021055.1| Homo sapiens cDNA clone IMAGE:2822943, **** WARNING: chimeric clone **** Length = 4821 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1747 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1806 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1807 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1866 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1867 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1926 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1927 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 1972
>ref|NM_007126.2| Homo sapiens valosin-containing protein (VCP), mRNA Length = 3198 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1663 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1722 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1723 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1782 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1783 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1842 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1843 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 1888
>gb|BC096751.1| Homo sapiens cDNA clone IMAGE:5296598, containing frame-shift errors Length = 2894 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1699 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1758 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1759 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1818 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1819 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1878 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1879 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 1924
>emb|AL137377.1|HSM802065 Homo sapiens mRNA; cDNA DKFZp434K0126 (from clone DKFZp434K0126) Length = 1862 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 326 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 385 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 386 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 445 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 446 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 505 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 506 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 551
>emb|CR606334.1| full-length cDNA clone CS0DM007YL14 of Fetal liver of Homo sapiens (human) Length = 2858 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1690 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1749 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1750 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1809 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1810 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1869 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1870 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 1915
>gb|AF313486.1|AF313485S2 Homo sapiens tissue-type kidney valosin-containing protein mRNA, partial cds Length = 1303 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 337 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 396 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 397 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 456 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 457 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 516 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 517 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 562
>gb|AF100752.1|AF100752 Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2887 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1663 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1722 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1723 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1782 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1783 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1842 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1843 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 1888
>gb|BC110913.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone MGC:131997 IMAGE:6502535), complete cds Length = 3212 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1650 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1709 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1710 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1769 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1770 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1829 Query: 416 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 | ||||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1830 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgt 1875
>ref|XM_985571.1| PREDICTED: Mus musculus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC675857), mRNA Length = 3257 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || |||||| Sbjct: 1699 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtac 1758 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 || ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| Sbjct: 1759 cccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttctt 1818 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1819 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1878 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1879 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1931 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1573 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1616
>ref|XM_861110.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 13 (LOC481590), mRNA Length = 3371 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1694 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1753 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1754 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1813 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_861098.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 12 (LOC481590), mRNA Length = 3398 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1694 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1753 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1754 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1813 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_538712.2| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC481590), mRNA Length = 3377 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1694 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1753 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1754 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1813 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_861074.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 11 (LOC481590), mRNA Length = 2599 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1694 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1753 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1754 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1813 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_861059.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 10 (LOC481590), mRNA Length = 3227 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1562 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1621 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1622 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1681 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1682 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1741 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1742 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1794
>ref|XM_861044.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 9 (LOC481590), mRNA Length = 3302 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1637 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1696 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1697 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1756 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1757 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1816 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1817 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1869
>ref|XM_860982.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 5 (LOC481590), mRNA Length = 2660 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1694 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1753 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1754 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1813 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_860961.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 4 (LOC481590), mRNA Length = 3361 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1696 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1755 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1756 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1815 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1816 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1875 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1876 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1928
>ref|XM_847533.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 3 (LOC481590), mRNA Length = 3359 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| Sbjct: 1694 tgggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtat 1753 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| |||||| |||||||||||| | || |||||||| || || Sbjct: 1754 cctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactc 1813 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| ||| Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>emb|Z14044.1|MMVALPRO M.musculus mRNA for valosin-containing protein Length = 3143 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || |||||| Sbjct: 1587 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtac 1646 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 || ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| Sbjct: 1647 cccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttctt 1706 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1707 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1766 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1767 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1819 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1461 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1504
>ref|NG_002295.1| Mus musculus valosin containing protein pseudogene (Vcp-ps) on chromosome X Length = 3607 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || |||||| Sbjct: 1946 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtac 2005 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 || ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| Sbjct: 2006 cccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttctt 2065 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 2066 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 2125 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 2126 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 2178 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1820 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1863
>gb|AF122048.1|AF122048 Mus musculus p97 ATPase pseudogene, complete sequence Length = 3607 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || |||||| Sbjct: 1946 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtac 2005 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 || ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| Sbjct: 2006 cccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttctt 2065 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 2066 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 2125 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 2126 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 2178 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1820 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1863
>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete sequence Length = 202972 Score = 176 bits (89), Expect = 4e-41 Identities = 197/233 (84%) Strand = Plus / Minus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || |||||| Sbjct: 123505 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtac 123446 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 || ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| Sbjct: 123445 cccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttctt 123386 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 123385 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 123326 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 123325 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 123273 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 123631 gatgagaccattgatgctgaggtcatgaattccctggcagttac 123588
>ref|NM_001034294.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (MGC128142), mRNA Length = 3258 Score = 174 bits (88), Expect = 2e-40 Identities = 178/208 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1712 atgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcacccagacaaattcc 1771 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 |||||||||||| | || ||||| || || ||||||||||| |||||||| ||||| | Sbjct: 1772 tcaagtttggcatgacaccctccaagggagtactgttctatggacctcctggctgtggga 1831 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||||| Sbjct: 1832 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaagg 1891 Query: 416 gacctgagctgcttaccatgtggtttgg 443 | ||||||||||| |||||||||||||| Sbjct: 1892 gtcctgagctgctcaccatgtggtttgg 1919
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 174 bits (88), Expect = 2e-40 Identities = 169/196 (86%) Strand = Plus / Minus Query: 266 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 325 |||| ||||||||||| ||||| |||||| ||||||||||||| | |||||||| || | Sbjct: 30244 agtatcctgtggagcacccagacaaattcctgaagtttggcatgacaccttccaagggag 30185 Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 385 ||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||| |||| Sbjct: 30184 ttctgttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatg 30125 Query: 386 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 445 | |||||||| ||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 30124 aatgccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttgggg 30065 Query: 446 agagtgaggctaatgt 461 || |||||| ||||| Sbjct: 30064 agtctgaggccaatgt 30049
>gb|BC103125.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), mRNA (cDNA clone MGC:128142 IMAGE:7988284), complete cds Length = 3258 Score = 174 bits (88), Expect = 2e-40 Identities = 178/208 (85%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1712 atgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcacccagacaaattcc 1771 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 |||||||||||| | || ||||| || || ||||||||||| |||||||| ||||| | Sbjct: 1772 tcaagtttggcatgacaccctccaagggagtactgttctatggacctcctggctgtggga 1831 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||||| Sbjct: 1832 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaagg 1891 Query: 416 gacctgagctgcttaccatgtggtttgg 443 | ||||||||||| |||||||||||||| Sbjct: 1892 gtcctgagctgctcaccatgtggtttgg 1919
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 174 bits (88), Expect = 2e-40 Identities = 169/196 (86%) Strand = Plus / Minus Query: 266 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 325 |||| ||||||||||| ||||| |||||| ||||||||||||| | |||||||| || | Sbjct: 40432 agtatcctgtggagcacccagacaaattcctgaagtttggcatgacaccttccaagggag 40373 Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 385 ||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||| |||| Sbjct: 40372 ttctgttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatg 40313 Query: 386 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 445 | |||||||| ||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 40312 aatgccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttgggg 40253 Query: 446 agagtgaggctaatgt 461 || |||||| ||||| Sbjct: 40252 agtctgaggccaatgt 40237
>gb|BC049114.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:61308 IMAGE:6810751), complete cds Length = 2876 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1703 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1762 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1763 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1822 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1823 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1882 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1883 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1935 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1577 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1620
>ref|NM_009503.2| Mus musculus valosin containing protein (Vcp), mRNA Length = 3245 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1684 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1743 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1744 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1803 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1804 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1863 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1864 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1916 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1558 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1601
>dbj|AK149931.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530106G21 product:valosin containing protein, full insert sequence Length = 2803 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1648 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1707 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1708 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1767 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1768 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1827 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1828 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1880 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1522 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1565
>dbj|AK146109.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530030L06 product:valosin containing protein, full insert sequence Length = 2855 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1650 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1709 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1710 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1769 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1770 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1829 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1830 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1882 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1524 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1567
>dbj|AK153012.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830114G12 product:valosin containing protein, full insert sequence Length = 2841 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1686 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1745 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1746 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1805 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1806 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1865 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1866 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1918
>dbj|AK159177.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420007G04 product:valosin containing protein, full insert sequence Length = 2890 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1684 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1743 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1744 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1803 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1804 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1863 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1864 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1916 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1558 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1601
>dbj|AK151418.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830029K16 product:valosin containing protein, full insert sequence Length = 3210 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1649 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1708 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1709 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1768 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1769 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1828 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1829 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1881 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1523 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1566
>dbj|AK167794.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730026E20 product:valosin containing protein, full insert sequence Length = 2858 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1703 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1762 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1763 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1822 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1823 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1882 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1883 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1935 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1577 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1620
>dbj|AK160889.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732413B21 product:valosin containing protein, full insert sequence Length = 2726 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1570 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1629 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1630 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1689 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1690 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1749 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1750 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1802 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1444 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1487
>dbj|AK153249.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129H23 product:valosin containing protein, full insert sequence Length = 3286 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1726 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1785 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1786 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1845 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1846 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1905 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1906 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1958 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1600 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1643
>dbj|AK159509.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420022F22 product:valosin containing protein, full insert sequence Length = 2882 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1727 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1786 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1787 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1846 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1847 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1906 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1907 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1959 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1601 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1644
>dbj|AK169140.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920083B16 product:valosin containing protein, full insert sequence Length = 2812 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1657 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1716 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1717 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1776 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1777 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1836 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1837 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1889
>dbj|AK151109.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025E07 product:valosin containing protein, full insert sequence Length = 3210 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1649 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1708 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1709 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1768 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1769 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1828 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1829 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1881 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1523 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1566
>dbj|AK010612.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030B05 product:transitional endoplasmic reticulum ATPase homolog [Sus scrofa domestica], full insert sequence Length = 1665 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 105 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 164 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 165 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 224 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 225 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 284 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 285 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 337
>dbj|AK083821.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130015G23 product:valosin containing protein, full insert sequence Length = 2416 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1261 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1320 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1321 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1380 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1381 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1440 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1441 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1493 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1135 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1178
>dbj|AK028264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001E05 product:valosin containing protein, full insert sequence Length = 3245 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1684 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1743 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1744 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1803 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1804 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1863 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1864 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1916 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1558 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1601
>dbj|AK030751.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730519N02 product:valosin containing protein, full insert sequence Length = 3091 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1586 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1645 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1646 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1705 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1706 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1765 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1766 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1818 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1460 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1503
>gb|BC043053.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:57954 IMAGE:6418662), complete cds Length = 2898 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1659 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1718 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1719 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1778 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1779 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1838 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1839 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1891 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1533 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1576
>dbj|AK159475.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020M12 product:valosin containing protein, full insert sequence Length = 2859 Score = 163 bits (82), Expect = 6e-37 Identities = 193/230 (83%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| Sbjct: 1683 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtat 1742 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 |||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| Sbjct: 1743 cctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttctt 1802 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| ||| Sbjct: 1803 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1862 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 ||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 1863 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtt 1912 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 1557 gatgagaccattgatgctgaggtcatgaattccctggcagttac 1600
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 159 bits (80), Expect = 1e-35 Identities = 194/232 (83%) Strand = Plus / Plus Query: 238 gtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgag 297 ||||| || |||||||||||| || |||||||| |||||||| || ||||| |||||| Sbjct: 873 gtcaagcgcgagctgcaggaggtggtgcagtacccagtggagcaccccgagaagttcgag 932 Query: 298 aagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaa 357 ||||| ||||||||||| ||||| || || |||||||||||||| || || || || || Sbjct: 933 aagttcggcatgtccccctccaagggagtgctgttctatggcccaccagggtgcggaaag 992 Query: 358 accttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaaggga 417 || | || ||||| ||||| |||||||||||||| ||||||||||| ||||||| Sbjct: 993 acaccccttgcaaaggcgattgccaatgagtgccaggccaacttcatcagcgtcaagggg 1052 Query: 418 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 469 ||||||||||| ||||||||||| |||||||||||||| || |||||||||| Sbjct: 1053 cctgagctgctcaccatgtggttcggtgagagtgaggccaacgtgcgtgaga 1104
>gb|AY609417.1| Sus scrofa clone Clu_1080.scr.msk.p1.Contig5, mRNA sequence Length = 3968 Score = 159 bits (80), Expect = 1e-35 Identities = 176/208 (84%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1629 atgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcacccagacaaattcc 1688 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 |||||||||||| | || ||||| || || || |||||||| |||||||| ||||| | Sbjct: 1689 tcaagtttggcatgacaccctccaagggagtgctattctatggacctcctggctgtggga 1748 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||| | Sbjct: 1749 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaaag 1808 Query: 416 gacctgagctgcttaccatgtggtttgg 443 | ||||||||||| |||||||||||||| Sbjct: 1809 gtcctgagctgctcaccatgtggtttgg 1836
>ref|NM_214280.1| Sus scrofa valosin-containing protein (VCP), mRNA Length = 3147 Score = 151 bits (76), Expect = 2e-33 Identities = 175/208 (84%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1623 atgtcaaacgtgagcttcaggacctggtccagtatcctgtggagcacccagacaaattcc 1682 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 |||||||||||| | || ||||| || || || |||||||| |||||||| ||||| | Sbjct: 1683 tcaagtttggcatgacaccctccaagggagtgctattctatggacctcctggctgtggga 1742 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||| | Sbjct: 1743 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaaag 1802 Query: 416 gacctgagctgcttaccatgtggtttgg 443 | ||||||||||| |||||||||||||| Sbjct: 1803 gtcctgagctgctcaccatgtggtttgg 1830
>gb|M30143.1|PIGVALA Pig valosin-containing protein (VCP) mRNA, complete cds Length = 3147 Score = 151 bits (76), Expect = 2e-33 Identities = 175/208 (84%) Strand = Plus / Plus Query: 236 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 295 |||||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1623 atgtcaaacgtgagcttcaggacctggtccagtatcctgtggagcacccagacaaattcc 1682 Query: 296 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 355 |||||||||||| | || ||||| || || || |||||||| |||||||| ||||| | Sbjct: 1683 tcaagtttggcatgacaccctccaagggagtgctattctatggacctcctggctgtggga 1742 Query: 356 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 415 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||| | Sbjct: 1743 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaaag 1802 Query: 416 gacctgagctgcttaccatgtggtttgg 443 | ||||||||||| |||||||||||||| Sbjct: 1803 gtcctgagctgctcaccatgtggtttgg 1830
>dbj|AK212503.1| Mus musculus cDNA, clone:Y2G0125C20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 333 Score = 141 bits (71), Expect = 2e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK205742.1| Mus musculus cDNA, clone:Y2G0102K06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 141 bits (71), Expect = 2e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK204815.1| Mus musculus cDNA, clone:Y1G0149L07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 141 bits (71), Expect = 2e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK132843.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930435I17 product:hypothetical protein, full insert sequence Length = 1018 Score = 139 bits (70), Expect = 9e-30 Identities = 151/178 (84%) Strand = Plus / Minus Query: 266 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 325 |||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| | Sbjct: 957 agtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcg 898 Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 385 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| |||| Sbjct: 897 ttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatg 838 Query: 386 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 | |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 837 aatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 780
>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence Length = 124230 Score = 139 bits (70), Expect = 9e-30 Identities = 151/178 (84%) Strand = Plus / Plus Query: 266 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 325 |||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| | Sbjct: 84795 agtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcg 84854 Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 385 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| |||| Sbjct: 84855 ttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatg 84914 Query: 386 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 | |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 84915 aatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 84972 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggag 258 |||||||||||||| || ||||| |||||||||| ||||| |||||| Sbjct: 84013 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggag 84060 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 83783 gatgagaccattgatgctgaggtcatgaattccctggcagttac 83826
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 139 bits (70), Expect = 9e-30 Identities = 151/178 (84%) Strand = Plus / Minus Query: 266 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 325 |||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| | Sbjct: 119786 agtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcg 119727 Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 385 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| |||| Sbjct: 119726 ttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatg 119667 Query: 386 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 | |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 119666 aatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 119609 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Minus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggag 258 |||||||||||||| || ||||| |||||||||| ||||| |||||| Sbjct: 120568 tgggaagatattggaggcctggaggatgtcaaacgtgagcttcaggag 120521 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 120798 gatgagaccattgatgctgaggtcatgaattccctggcagttac 120755
>dbj|AK215003.1| Mus musculus cDNA, clone:Y2G0133K12, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 || |||||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtt 197
>dbj|AK216904.1| Mus musculus cDNA, clone:Y2G0139P13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 133 bits (67), Expect = 6e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 attcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK216170.1| Mus musculus cDNA, clone:Y2G0137H05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 133 bits (67), Expect = 6e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || || ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatggcaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK214913.1| Mus musculus cDNA, clone:Y2G0133G06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 133 bits (67), Expect = 6e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgcggtttgg 200
>dbj|AK198469.1| Mus musculus cDNA, clone:Y1G0128E09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 133 bits (67), Expect = 6e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 || || |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gtccttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>ref|NM_201481.1| Danio rerio valosin containing protein (vcp), mRNA Length = 2659 Score = 129 bits (65), Expect = 9e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1556 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1615 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1616 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1675 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1676 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1735 Query: 427 cttaccatgtggtttgg 443 || || ||||||||||| Sbjct: 1736 ctcactatgtggtttgg 1752 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 1311 atgttggtgctgatctggctgccctttg 1338
>gb|BC067384.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:77072 IMAGE:6960180), complete cds Length = 2635 Score = 129 bits (65), Expect = 9e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1532 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1591 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1592 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1651 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1652 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1711 Query: 427 cttaccatgtggtttgg 443 || || ||||||||||| Sbjct: 1712 ctcactatgtggtttgg 1728 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 1287 atgttggtgctgatctggctgccctttg 1314
>gb|AY576993.1| Danio rerio clone RK103A4E09 valosin-containing protein mRNA, complete cds Length = 2657 Score = 129 bits (65), Expect = 9e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1593 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1652 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1653 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1712 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1713 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1772 Query: 427 cttaccatgtggtttgg 443 || || ||||||||||| Sbjct: 1773 ctcactatgtggtttgg 1789 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 1348 atgttggtgctgatctggctgccctttg 1375
>ref|XM_692759.1| PREDICTED: Danio rerio similar to Valosin containing protein (LOC569377), mRNA Length = 1747 Score = 129 bits (65), Expect = 9e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 295 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 354 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 355 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 414 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 415 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 474 Query: 427 cttaccatgtggtttgg 443 || || ||||||||||| Sbjct: 475 ctcactatgtggtttgg 491 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 50 atgttggtgctgatctggctgccctttg 77
>dbj|AB093594.1| Danio rerio CDC48 mRNA, partial cds Length = 2418 Score = 129 bits (65), Expect = 9e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1462 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1521 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1522 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1581 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1582 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1641 Query: 427 cttaccatgtggtttgg 443 || || ||||||||||| Sbjct: 1642 ctcactatgtggtttgg 1658 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 1217 atgttggtgctgatctggctgccctttg 1244
>gb|BC050488.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:56043 IMAGE:3820156), complete cds Length = 2659 Score = 129 bits (65), Expect = 9e-27 Identities = 164/197 (83%) Strand = Plus / Plus Query: 247 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 306 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1556 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1615 Query: 307 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 366 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1616 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1675 Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1676 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1735 Query: 427 cttaccatgtggtttgg 443 || || ||||||||||| Sbjct: 1736 ctcactatgtggtttgg 1752 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 1311 atgttggtgctgatctggctgccctttg 1338
>dbj|AK181023.1| Mus musculus cDNA, clone:Y0G0116K19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 287 Score = 127 bits (64), Expect = 4e-26 Identities = 152/180 (84%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 87 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 146 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 147 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 206 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgag-ctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 207 gaatgccaggccaacttcatctccatcaagggtcctgagactgcttaccatgtggtttgg 266
>dbj|AK189172.1| Mus musculus cDNA, clone:Y0G0148B22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 ||||| |||||||| |||||||| ||||| |||||||| ||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactgggtaaagccattgctaat 141 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 || |||||||| ||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatttggtttgg 200
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 123 bits (62), Expect = 5e-25 Identities = 149/178 (83%) Strand = Plus / Minus Query: 266 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 325 ||||||| |||||||||||||| |||||| |||||||||||| | || ||||| |||| Sbjct: 149844 agtacccagtggagcatccagacaaattcctcaagtttggcatgactccatccaagggtg 149785 Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 385 | ||||||||||| || || || |||||||||||| | |||||||||| || || |||| Sbjct: 149784 tgctgttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatg 149725 Query: 386 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 |||||||||| ||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 149724 agtgccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttgg 149667 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 150309 atgttggtgctgatctggctgccctttg 150282
>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5, complete sequence Length = 143278 Score = 123 bits (62), Expect = 5e-25 Identities = 149/178 (83%) Strand = Plus / Plus Query: 266 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 325 ||||||| |||||||||||||| |||||| |||||||||||| | || ||||| |||| Sbjct: 132838 agtacccagtggagcatccagacaaattcctcaagtttggcatgactccatccaagggtg 132897 Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 385 | ||||||||||| || || || |||||||||||| | |||||||||| || || |||| Sbjct: 132898 tgctgttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatg 132957 Query: 386 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 |||||||||| ||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 132958 agtgccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttgg 133015 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttg 29 |||||||||||||||| ||||| ||||| Sbjct: 132373 atgttggtgctgatctggctgccctttg 132400
>dbj|AK186814.1| Mus musculus cDNA, clone:Y0G0138N13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 222 Score = 119 bits (60), Expect = 9e-24 Identities = 138/164 (84%) Strand = Plus / Plus Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 |||||||| |||||| || ||||||||| | || |||||||| ||||| |||||||| Sbjct: 38 catccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttttctatgga 97 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 |||||||| | ||| |||||||| |||| || || ||||| ||||| |||||||| ||| Sbjct: 98 cctcctggctttgggaaaaccttactggctaaagccattgctaatgaatgccaggccaac 157 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 |||||| |||||||| |||||||||||||||||||||||||| Sbjct: 158 ttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 201
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 117 bits (59), Expect = 3e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 257 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 316 ||||||| || ||||| || ||||| |||||||| || ||||| || || ||||| || | Sbjct: 44928 agactgttcaatacccagtcgagcacccagagaagtttgagaaattcgggatgtctccat 44869 Query: 317 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 376 | || || || || ||||| || |||||||||||||| |||||| | |||||||| || | Sbjct: 44868 caaagggagtccttttctacggtcctcctggatgtgggaaaacccttttggccaaagcta 44809 Query: 377 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 436 |||| || |||||||| ||||| ||||||||| ||||||| || ||||| || || |||| Sbjct: 44808 ttgccaacgagtgccaagctaatttcatcagtgtcaagggtcccgagcttctgacaatgt 44749 Query: 437 ggtttggtgagagtgaggctaatgtgcgtga 467 ||||||| |||||||| || ||||| ||||| Sbjct: 44748 ggtttggagagagtgaagcaaatgttcgtga 44718 Score = 44.1 bits (22), Expect = 0.41 Identities = 142/182 (78%) Strand = Plus / Minus Query: 7 ggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaagatg 66 |||||||||||||| ||| | || || ||||| || || || ||||| | ||||||||| Sbjct: 45350 ggtgctgatcttgcagctttgtgcacagaggccgccctgcaatgcatcagggagaagatg 45291 Query: 67 gacattatagatcttgaggatgagaccatagatgctgagatactgaattccatggctgtt 126 || | || ||||| || ||||| ||||||| ||||| || || ||||||||||| || Sbjct: 45290 gatgtgattgatctggaagatgactccatagacgctgaaatcctcaattccatggcagtc 45231 Query: 127 acaaacgaccatttcaagactgcactaacaacaagcaacccatctgctctccgtgaaact 186 || || || |||||| | ||||| || | |||||||||||||| || ||||||||| Sbjct: 45230 actaatgaacatttccacactgctctcgggaacagcaacccatctgcacttcgtgaaact 45171 Query: 187 gt 188 || Sbjct: 45170 gt 45169
>ref|XM_567564.1| Cryptococcus neoformans var. neoformans JEC21 MMS2 (CNJ02750) partial mRNA Length = 2673 Score = 97.6 bits (49), Expect = 3e-17 Identities = 178/221 (80%) Strand = Plus / Plus Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||||||| |||| || || ||| |||| || |||||||||||||||| |||||| ||| Sbjct: 1555 attggtggtttggacaaggttaaaagggaactccaggagactgtccagttccctgtcgag 1614 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 ||||| ||||| ||| |||| |||||||| || || || |||||||| ||||| || Sbjct: 1615 catcctgagaagttcctcaagtacggcatgtctccatcaaagggtgttctcttctacggt 1674 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 |||||||| |||||||| |||||||| ||||| || || ||||| || || || ||| Sbjct: 1675 cctcctggtaccggtaaaacgttgttggctaaggctatcgccaatgaatgtcaagcgaac 1734 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 |||||| |||||| || |||||||| | ||||||||||| Sbjct: 1735 ttcatctctatcaaaggtcctgagcttttgaccatgtggtt 1775
>gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mRNA, complete cds Length = 2681 Score = 93.7 bits (47), Expect = 5e-16 Identities = 191/239 (79%) Strand = Plus / Plus Query: 223 ggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggagcat 282 ||||||||||| ||||||| |||| || |||||| ||| |||||||| |||||||| Sbjct: 1281 ggtggtctggaggatgtcaagagggaactccaggagcttgtacagtacccagtggagcac 1340 Query: 283 ccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggccct 342 ||||| || ||| |||||| |||||| |||| ||||| || || |||||||| || || Sbjct: 1341 ccagacaagttcttgaagttcggcatgaccccatccaagggcgtgctgttctacggaccc 1400 Query: 343 cctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttc 402 || || || ||||| ||| || |||||||||| || || || ||||||||||| |||||| Sbjct: 1401 ccaggttgcggtaagaccctgctggccaaggccatcgccaacgagtgccaggccaacttc 1460 Query: 403 atcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgt 461 ||| ||||| || || ||| |||| ||||||||||| || ||| |||||| ||||| Sbjct: 1461 atctccatcaaagggcccgagttgctcaccatgtggttcggcgagtctgaggccaatgt 1519
>gb|BC046949.1| Xenopus laevis valosin containing protein, mRNA (cDNA clone MGC:52611 IMAGE:5571505), complete cds Length = 3148 Score = 93.7 bits (47), Expect = 5e-16 Identities = 158/195 (81%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||||||| ||||| | ||||| ||||||| |||||| || ||||| Sbjct: 1577 tgggaggatattggtggtttggaagacgtcaagagggagctccaggagctggttcagtat 1636 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||||||||| || ||| |||||| || ||| | || || || ||||| || Sbjct: 1637 cctgtggagcatccagacaagttcctgaagttcggaatgactccatcaaagggtgtccta 1696 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| |||||||| || ||| |||| ||||| ||||| || || ||| Sbjct: 1697 ttctatggtccacctggttgtggtaagactttgctggctaaggccattgccaacgaatgc 1756 Query: 391 caggctaacttcatc 405 ||||| ||||||||| Sbjct: 1757 caggccaacttcatc 1771 Score = 46.1 bits (23), Expect = 0.10 Identities = 83/103 (80%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgaga 61 |||| ||||||||| | |||||||| || | || |||||||||||| ||| | ||| Sbjct: 1368 atgtaggtgctgatttggctgctctatgctcagaagctgctctccaggccatcaggaaga 1427 Query: 62 agatggacattatagatcttgaggatgagaccatagatgctga 104 |||||||| | ||||| || || ||||| |||||||||||||| Sbjct: 1428 agatggacctcatagacctggaagatgaaaccatagatgctga 1470
>emb|AJ719285.1| Gallus gallus mRNA for hypothetical protein, clone 1c3 Length = 2934 Score = 89.7 bits (45), Expect = 8e-15 Identities = 186/233 (79%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||||||||| ||| |||| || | || || |||||| ||| ||||| Sbjct: 1578 tgggaagatattggtggtctagaagatgtaaagagagaactccaggagcttgtacagtat 1637 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| || ||| || ||||||||| | || || ||||| |||||| Sbjct: 1638 cctgtggagcacccagacaagttcctcaaatttggcatgactccatcaaaaggagttctg 1697 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| |||||||| || | ||||||| || ||||| || || ||| Sbjct: 1698 ttctatgggccgcctggctgtggtaagacacttctggccaaagccattgccaacgaatgc 1757 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| |||||||| |||||||| || || |||| |||||||||||||| Sbjct: 1758 caggcaaacttcatttccatcaaggggccagaattgctcaccatgtggtttgg 1810
>dbj|AB195711.1| Gallus gallus vcp mRNA for valosin containing protein, complete cds Length = 2916 Score = 89.7 bits (45), Expect = 8e-15 Identities = 186/233 (79%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 |||||||||||||||||||| ||| |||| || | || || |||||| ||| ||||| Sbjct: 1528 tgggaagatattggtggtctagaagatgtaaagagagaactccaggagcttgtacagtat 1587 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| || ||| || ||||||||| | || || ||||| |||||| Sbjct: 1588 cctgtggagcacccagacaagttcctcaaatttggcatgactccatcaaaaggagttctg 1647 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| |||||||| || | ||||||| || ||||| || || ||| Sbjct: 1648 ttctatgggccgcctggctgtggtaagacacttctggccaaagccattgccaacgaatgc 1707 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| |||||||| |||||||| || || |||| |||||||||||||| Sbjct: 1708 caggcaaacttcatttccatcaaggggccagaattgctcaccatgtggtttgg 1760
>emb|BX933202.2| Gallus gallus finished cDNA, clone ChEST509h23 Length = 755 Score = 89.7 bits (45), Expect = 8e-15 Identities = 186/233 (79%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||||||||||||||| || ||| |||| || | || || |||||| ||| ||||| Sbjct: 482 tgggaagatattggtggcctagaagatgtaaagagagaactccaggagcttgtacagtat 541 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||| ||||| || ||| || ||||| ||| |||| || ||||| |||||| Sbjct: 542 cctgtggagcacccagacaagttcctaaaatttggtatgaccccatcaaaaggggttctg 601 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 || ||||| || |||| |||||||| || | ||||||| || ||||| ||||| ||| Sbjct: 602 ttttatgggccaactggttgtggtaagacacttctggccaaagccattgccaatgaatgc 661 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 ||||| |||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 662 caggcaaacttcatttccatcaagggaccagaattgcttaccatgtggtttgg 714
>ref|XM_631818.1| Dictyostelium discoideum cell division cycle protein 48 (DDB0191154), partial mRNA Length = 2382 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||| ||||||||||| |||||||||||| |||||||||| || ||||||||| Sbjct: 1210 tatgtaggtgccgatcttgctgccctttgtaccgagtctgctctccaatgtattcgtgag 1269 Query: 61 aagatgga 68 |||||||| Sbjct: 1270 aagatgga 1277 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 166 ccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagatattggt 225 ||||||||||| |||||||| || || |||||||| | | ||||||||||||||||| Sbjct: 1375 ccatctgctcttcgtgaaaccgtcgtcgaagttccaacaaccacttgggaagatattggt 1434 Query: 226 ggtctggaa 234 ||| ||||| Sbjct: 1435 ggtttggaa 1443
>gb|U83085.2|DDU83085 Dictyostelium discoideum cell division cycle protein 48 (cdcD) mRNA, complete cds Length = 2517 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 1 tatgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgag 60 ||||| ||||| ||||||||||| |||||||||||| |||||||||| || ||||||||| Sbjct: 1235 tatgtaggtgccgatcttgctgccctttgtaccgagtctgctctccaatgtattcgtgag 1294 Query: 61 aagatgga 68 |||||||| Sbjct: 1295 aagatgga 1302 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 166 ccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagatattggt 225 ||||||||||| |||||||| || || |||||||| | | ||||||||||||||||| Sbjct: 1400 ccatctgctcttcgtgaaaccgtcgtcgaagttccaacaaccacttgggaagatattggt 1459 Query: 226 ggtctggaa 234 ||| ||||| Sbjct: 1460 ggtttggaa 1468
>emb|X54240.1|XLP9715S X.laevis mRNA for p97 subunit of 15S Mg(2+)-ATPase Length = 3286 Score = 85.7 bits (43), Expect = 1e-13 Identities = 157/195 (80%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| |||||||| ||| ||||| | ||||| ||||||| |||||| || ||||| Sbjct: 1726 tgggaggatattgggggtttggaagacgtcaagagggagctccaggagctggttcagtat 1785 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||||||||| || ||| |||||| || ||| | || || || ||||| || Sbjct: 1786 cctgtggagcatccagacaagttcctgaagttcggaatgactccatcaaagggtgtccta 1845 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 |||||||| || ||||| |||||||| || ||| |||| ||||| ||||| || || ||| Sbjct: 1846 ttctatggtccacctggttgtggtaagactttgctggctaaggccattgccaacgaatgc 1905 Query: 391 caggctaacttcatc 405 ||||| ||||||||| Sbjct: 1906 caggccaacttcatc 1920 Score = 46.1 bits (23), Expect = 0.10 Identities = 83/103 (80%) Strand = Plus / Plus Query: 2 atgttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgaga 61 |||| ||||||||| | |||||||| || | || |||||||||||| ||| | ||| Sbjct: 1517 atgtaggtgctgatttggctgctctgtgctcagaagctgctctccaggccatcaggaaga 1576 Query: 62 agatggacattatagatcttgaggatgagaccatagatgctga 104 |||||||| | ||||| || || ||||| |||||||||||||| Sbjct: 1577 agatggacctcatagacctggaagatgaaaccatagatgctga 1619
>dbj|AK113049.1| Ciona intestinalis cDNA, clone:ciad002b13, full insert sequence Length = 2972 Score = 85.7 bits (43), Expect = 1e-13 Identities = 163/203 (80%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||||||||| |||||||||||||| ||| |||||||| ||| | || ||||| ||| Sbjct: 1574 cagtaccctgttgagcatccagagaagttccttaagtttggtatgacaccatccaagggt 1633 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 || |||||||||| || || || |||||||||||| | | ||||| || ||||| || Sbjct: 1634 gtgttgttctatgggccaccaggttgtggtaaaaccctccttgccaaagctattgccaac 1693 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggt 444 ||||| || || || |||||| |||||||| || ||| || | ||||||||||||||| Sbjct: 1694 gagtgtcaagccaatttcatctccatcaagggtcccgagatgttgaccatgtggtttggt 1753 Query: 445 gagagtgaggctaatgtgcgtga 467 || |||||||||||| ||||| Sbjct: 1754 gaatctgaggctaatgtccgtga 1776 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 10 gctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaagatggac 69 |||||||| |||||||||||| | |||||||| |||||| ||||||| ||||||||| Sbjct: 1319 gctgatctcgctgctctttgttcggaggctgccctccagcagattcgtggaaagatggac 1378 Query: 70 attatagatcttgaggatgaga 91 | || |||||||||||||||| Sbjct: 1379 ctcattgatcttgaggatgaga 1400
>ref|XM_774925.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC575609), mRNA Length = 3597 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||||||||||||||||||||| || ||| ||||| |||||| |||| | || Sbjct: 1309 cagtaccctgtggagcatccagacaagttcctcaagttcggcatgaccccgagccgtggc 1368 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 || || ||||| || || || ||||||||||| ||| || | |||||||| || || || Sbjct: 1369 gtgctcttctacggtcccccaggatgtggtaagaccctgctcgccaaggccatcgccaac 1428 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 ||||||||||| ||||||||| ||||||||| || |||||||| ||||||||||| Sbjct: 1429 gagtgccaggccaacttcatctctatcaagggtccggagctgctcaccatgtggtt 1484
>ref|XM_796615.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 2 (LOC575609), mRNA Length = 3621 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Plus Query: 265 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 324 ||||||||||||||||||||||| || ||| ||||| |||||| |||| | || Sbjct: 1309 cagtaccctgtggagcatccagacaagttcctcaagttcggcatgaccccgagccgtggc 1368 Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 384 || || ||||| || || || ||||||||||| ||| || | |||||||| || || || Sbjct: 1369 gtgctcttctacggtcccccaggatgtggtaagaccctgctcgccaaggccatcgccaac 1428 Query: 385 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 ||||||||||| ||||||||| ||||||||| || |||||||| ||||||||||| Sbjct: 1429 gagtgccaggccaacttcatctctatcaagggtccggagctgctcaccatgtggtt 1484
>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full insert sequence Length = 3464 Score = 79.8 bits (40), Expect = 7e-12 Identities = 181/228 (79%) Strand = Plus / Plus Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||||||||| || || ||||| | |||||| |||||||| ||| |||||| || ||| Sbjct: 2330 attggtggtctcgagaaggtcaagcaggagctccaggagaccgtctcgtaccccgtcgag 2389 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 ||||| || || ||| |||| |||||| | ||||| || ||||| || ||||| || Sbjct: 2390 catcccgaaaagttcctcaagtacggcatggcgccttcgaagggtgtcctcttctacggt 2449 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 399 || ||||| |||||| || || |||||||||| || || || ||||||||||| ||| Sbjct: 2450 ccccctggtactggtaagacgctgctggccaaggcgatcgccaacgagtgccaggccaac 2509 Query: 400 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 447 |||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 2510 ttcatctcgatcaagggtcccgagctgctcaccatgtggttcggtgag 2557
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 77.8 bits (39), Expect = 3e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 220 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 279 ||||||||| |||| || || ||| |||| || |||||||||||||||| |||||| ||| Sbjct: 795097 attggtggtttggacaaggttaaaagggaactccaggagactgtccagttccctgtcgag 795156 Query: 280 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 339 ||||| ||||| ||| |||| |||||||| || || || |||||||| ||||| || Sbjct: 795157 catcctgagaagttcctcaagtacggcatgtctccatcaaagggtgttctcttctacggt 795216 Query: 340 cctcctggatgtggtaaaaccttgttggccaaggc 374 |||||||| |||||||| |||||||| ||||| Sbjct: 795217 cctcctggtaccggtaaaacgttgttggctaaggc 795251
>ref|XM_482385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2547 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| || || || |||||| |||| ||||||||||| |||||||| || |||| Sbjct: 1616 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 1675 Query: 425 tgcttaccatgtggtttggtgagagtgagg 454 |||| ||||||||||| || ||||| |||| Sbjct: 1676 tgctcaccatgtggttcggcgagagcgagg 1705
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| || || || |||||| |||| ||||||||||| |||||||| || |||| Sbjct: 19750766 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 19750707 Query: 425 tgcttaccatgtggtttggtgagagtgagg 454 |||| ||||||||||| || ||||| |||| Sbjct: 19750706 tgctcaccatgtggttcggcgagagcgagg 19750677
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| || || || |||||| |||| ||||||||||| |||||||| || |||| Sbjct: 79717 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 79658 Query: 425 tgcttaccatgtggtttggtgagagtgagg 454 |||| ||||||||||| || ||||| |||| Sbjct: 79657 tgctcaccatgtggttcggcgagagcgagg 79628
>gb|DQ443348.1| Bombyx mori transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2760 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 322 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 381 |||||||| ||||| || |||||||| ||||||||||| ||| |||| ||||| || || Sbjct: 1644 ggtgttctcttctacggacctcctggttgtggtaaaactttgctggcaaaggccatcgcc 1703 Query: 382 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 || ||||| ||||||||||| || | |||||||| |||||||| ||||||||||| Sbjct: 1704 aacgagtgtcaggctaactttatatcagtgaagggaccagagctgctcaccatgtggtt 1762
>ref|XM_750952.1| Aspergillus fumigatus Af293 cell division control protein Cdc48 (Afu2g17110) partial mRNA Length = 2460 Score = 69.9 bits (35), Expect = 7e-09 Identities = 206/263 (78%) Strand = Plus / Plus Query: 185 ctgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaac 244 ||||||| || |||||||||||| |||||| ||||||||||||||||| | ||||| | Sbjct: 1457 ctgttgtcgaggttcccaatgtccgttgggaggatattggtggtctggaggaggtcaagc 1516 Query: 245 gggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttg 304 | ||||| |||| ||||| ||||||||||| || || || || ||| ||||||| | Sbjct: 1517 gcgagctcatcgagagcgtccaataccctgtggatcaccccgaaaagttccagaagttcg 1576 Query: 305 gcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgt 364 || | || || ||| ||||||||||||||||| |||||||| |||||| ||| || Sbjct: 1577 gcctttcgccatcccgtggtgttctgttctatggtcctcctggtactggtaagaccatgc 1636 Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 | |||||||| | || || ||||| || ||||||||| ||||||||||||||| Sbjct: 1637 ttgccaaggccgtggcgaacgagtgtgctgccaacttcatctcagtcaagggacctgagc 1696 Query: 425 tgcttaccatgtggtttggtgag 447 | || | ||||||||| |||||| Sbjct: 1697 ttctgagcatgtggttcggtgag 1719
>gb|AY080962.1| Aspergillus fumigatus Mvp1p (25d9-1), Nha1p (25d9-2), 25D9-9 (25d9-9), 25D9-10 (25d9-10), Ste50p (25d9-3), Cdc48p (25d9-4), 25D9-5p (25d9-5), 25D9-11 (25d9-11), 25D9-6 (25d9-6), Nip7p (25d9-7), Noc3p (25d9-8), and 25D9-12 (25d9-12) genes, complete cds Length = 41396 Score = 69.9 bits (35), Expect = 7e-09 Identities = 206/263 (78%) Strand = Plus / Minus Query: 185 ctgttgttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaac 244 ||||||| || |||||||||||| |||||| ||||||||||||||||| | ||||| | Sbjct: 25029 ctgttgtcgaggttcccaatgtccgttgggaggatattggtggtctggaggaggtcaagc 24970 Query: 245 gggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttg 304 | ||||| |||| ||||| ||||||||||| || || || || ||| ||||||| | Sbjct: 24969 gcgagctcatcgagagcgtccaataccctgtggatcaccccgaaaagttccagaagttcg 24910 Query: 305 gcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgt 364 || | || || ||| ||||||||||||||||| |||||||| |||||| ||| || Sbjct: 24909 gcctttcgccatcccgtggtgttctgttctatggtcctcctggtactggtaagaccatgc 24850 Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 | |||||||| | || || ||||| || ||||||||| ||||||||||||||| Sbjct: 24849 ttgccaaggccgtggcgaacgagtgtgctgccaacttcatctcagtcaagggacctgagc 24790 Query: 425 tgcttaccatgtggtttggtgag 447 | || | ||||||||| |||||| Sbjct: 24789 ttctgagcatgtggttcggtgag 24767
>dbj|AB244027.1| Bombyx mori ter94 mRNA for transitional endoplasmic reticulum ATPase TER94, complete cds Length = 2721 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 322 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 381 |||||||| ||||| || |||||||| ||||||||||| ||| |||| ||||| || || Sbjct: 1619 ggtgttctcttctacggacctcctggttgtggtaaaactttgctggcaaaggccatcgcc 1678 Query: 382 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 || ||||| ||||||||||| || | |||||||| |||||||| ||||||||||| Sbjct: 1679 aacgagtgtcaggctaactttatatcagtgaagggaccagagctgctcaccatgtggtt 1737
>dbj|AB181225.1| Eisenia fetida evcp-1 mRNA for valosin containing protein-1, complete cds Length = 2932 Score = 69.9 bits (35), Expect = 7e-09 Identities = 157/195 (80%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||||||| |||| ||||||||||||||||||||||| ||||| || ||| || ||| Sbjct: 1535 tgggaagatgttggcggtctggaaaatgtcaaacgggaactgcaagaacttgtgcaatac 1594 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 || || ||||||||||| || ||| ||| ||||| ||| | || || || || || || Sbjct: 1595 ccggtagagcatccagacaagttcctgaaatttggaatgactccgtcaaagggggtgttg 1654 Query: 331 ttctatggccctcctggatgtggtaaaac-cttgttggccaaggcaattgcaaatgagtg 389 ||||| || || || || || || ||||| ||| || |||||||| |||||||| ||||| Sbjct: 1655 ttctacggacccccaggttgcggcaaaacgcttctt-gccaaggccattgcaaacgagtg 1713 Query: 390 ccaggctaacttcat 404 |||||| |||||||| Sbjct: 1714 ccaggccaacttcat 1728
>gb|AY190939.1| Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence Length = 45909 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 362 tgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctg 421 ||||||||||||| ||||| || ||||||||||| ||||||||| ||||||| || | Sbjct: 38371 tgttggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccg 38430 Query: 422 agctgcttaccatgtggtt 440 ||||||| ||||||||||| Sbjct: 38431 agctgctgaccatgtggtt 38449
>gb|DQ145270.1| Drosophila miranda neo-X TER94 gene, partial sequence Length = 1221 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 ||||||||||| || || || ||||| || || |||||||||| ||||| || |||||| Sbjct: 607 ttctatggcccgcccggttgcggtaagactctgctggccaaggccattgccaacgagtgc 666 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 ||||| ||||||||| ||||||| || |||||||| ||||||||||| Sbjct: 667 caggcaaacttcatctccgtcaaggggcccgagctgctgaccatgtggtt 716 Score = 40.1 bits (20), Expect = 6.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 246 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 305 ||||||||||||| ||||||||||| || |||||||| || || ||| |||||||| Sbjct: 522 ggagctgcaggagctggtccagtacccagtcgagcatcccgacaagttcctcaagtttgg 581 Query: 306 catg 309 |||| Sbjct: 582 catg 585
>gb|AF047037.1|AF047037 Drosophila melanogaster transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2550 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || |||| Sbjct: 1638 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgagc 1697 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 1698 tgctgaccatgtggtt 1713
>gb|AF132553.1| Drosophila melanogaster BcDNA.GM02885 (BcDNA.GM02885) mRNA, complete cds Length = 3018 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || |||| Sbjct: 1681 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgagc 1740 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 1741 tgctgaccatgtggtt 1756
>ref|XM_428317.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC430766), partial mRNA Length = 1516 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 ||||||| || ||||| ||||| |||||||| |||||||| ||||||||||| || Sbjct: 679 tggccaaagccattgccaatgaatgccaggcaaacttcatttccatcaagggaccagaat 738 Query: 425 tgcttaccatgtggtttgg 443 ||||||||||||||||||| Sbjct: 739 tgcttaccatgtggtttgg 757
>ref|XM_424984.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC427410), mRNA Length = 2303 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 301 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 360 ||||||||| | || || ||||| |||||||||||||| || ||||| |||||||| || Sbjct: 1554 tttggcatgactccatcaaaaggagttctgttctatgggccgcctggctgtggtaagaca 1613 Query: 361 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 420 | ||||||| || ||||| || || |||||||| |||||||| |||||||| || Sbjct: 1614 cttctggccaaagccattgccaacgaatgccaggcaaacttcatttccatcaaggggcca 1673 Query: 421 gagctgcttaccatgtggtttgg 443 || |||| |||||||||||||| Sbjct: 1674 gaattgctcaccatgtggtttgg 1696 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgt 239 |||||||||||||||||||| ||| |||| Sbjct: 1488 tgggaagatattggtggtctagaagatgt 1516
>gb|BC074716.1| Xenopus tropicalis valosin-containing protein, mRNA (cDNA clone MGC:69484 IMAGE:5336248), complete cds Length = 3258 Score = 60.0 bits (30), Expect = 7e-06 Identities = 180/230 (78%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| ||||| ||||| ||||| | ||||| ||||||| |||||| || ||||| Sbjct: 1539 tgggaggatatcggtggcttggaagacgtcaagagggagctccaggagctggtgcagtat 1598 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||||||||| || ||| |||||| || ||| |||| || || ||||| || Sbjct: 1599 cctgtggagcatccagacaagttcctgaagttcggaatgaccccatcgaagggtgtgctt 1658 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 ||||| || || || || || ||||| || || |||| ||||| ||||| || || ||| Sbjct: 1659 ttctacgggccccccgggtgcggtaagactctgctggctaaggccattgccaacgaatgc 1718 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 ||||| ||||||||| ||||| || || || ||||| ||||||||||| Sbjct: 1719 caggccaacttcatctccatcaaagggccagaactgctcaccatgtggtt 1768
>ref|XM_752110.1| Ustilago maydis 521 hypothetical protein (UM01056.1) partial mRNA Length = 2469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| ||||| || |||||||| || ||||| || |||||||| ||||||||| Sbjct: 1579 gccaaggctattgccaacgagtgccaagccaactttatttcgatcaagggtcctgagctg 1638 Query: 427 cttaccatgtggtttggtgagagtgaggctaatgtgcg 464 || ||||||||||| |||||| |||||||| ||||| Sbjct: 1639 ctcaccatgtggttcggtgagtcggaggctaacgtgcg 1676
>ref|XM_385706.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05530.1) partial mRNA Length = 2466 Score = 60.0 bits (30), Expect = 7e-06 Identities = 147/186 (79%) Strand = Plus / Plus Query: 262 gtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaa 321 |||||||||||||| || || || ||||| | | ||||| |||||||| |||||| | Sbjct: 1534 gtccagtaccctgtcgatcaccccgagaagtacctcaagttcggcatgtctccttcccga 1593 Query: 322 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 381 ||||| ||||||| ||| |||||||| ||||||||| ||||||||||||| | || Sbjct: 1594 ggtgtgctgttctttggtcctcctggtactggtaaaactatgttggccaaggccgtcgcc 1653 Query: 382 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggttt 441 || ||||| || ||||||||| ||||||||||||| || || | |||||||||| Sbjct: 1654 aacgagtgtgctgccaacttcatctccgtcaagggacctgaactcctcagcatgtggttt 1713 Query: 442 ggtgag 447 |||||| Sbjct: 1714 ggtgag 1719
>ref|NM_001005677.1| Xenopus tropicalis valosin-containing protein (vcp), mRNA Length = 3258 Score = 60.0 bits (30), Expect = 7e-06 Identities = 180/230 (78%) Strand = Plus / Plus Query: 211 tgggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtac 270 ||||| ||||| ||||| ||||| | ||||| ||||||| |||||| || ||||| Sbjct: 1539 tgggaggatatcggtggcttggaagacgtcaagagggagctccaggagctggtgcagtat 1598 Query: 271 cctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctg 330 ||||||||||||||||| || ||| |||||| || ||| |||| || || ||||| || Sbjct: 1599 cctgtggagcatccagacaagttcctgaagttcggaatgaccccatcgaagggtgtgctt 1658 Query: 331 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 390 ||||| || || || || || ||||| || || |||| ||||| ||||| || || ||| Sbjct: 1659 ttctacgggccccccgggtgcggtaagactctgctggctaaggccattgccaacgaatgc 1718 Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 440 ||||| ||||||||| ||||| || || || ||||| ||||||||||| Sbjct: 1719 caggccaacttcatctccatcaaagggccagaactgctcaccatgtggtt 1768
>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence Length = 29132 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 376 attgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatg 435 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 1139 attgccaatgaatgccaggctaacttcatttccatcaagggacccgagcttcttactatg 1198 Query: 436 tggtt 440 ||||| Sbjct: 1199 tggtt 1203
>ref|NM_063304.2| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.2) (cdc-48.2) mRNA, complete cds Length = 2632 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 376 attgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatg 435 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 1695 attgccaatgaatgccaggctaacttcatttccatcaagggacccgagcttcttactatg 1754 Query: 436 tggtt 440 ||||| Sbjct: 1755 tggtt 1759
>gb|AY973543.1| Hyaloperonospora parasitica isolate Emoy2 clone BAC 9B13 and BAC 4C4, complete sequence Length = 120624 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 322 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 381 ||||| ||||| || || || |||||||| || ||||| | ||||||||||| |||| Sbjct: 44708 ggtgtgctgttttacggtccacctggatgcggcaaaacgcttttggccaaggctgttgct 44767 Query: 382 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggttt 441 || || |||||||| ||||| ||| |||||||| || |||||| | |||||||||||| Sbjct: 44768 aacgaatgccaggcgaactttatctcaatcaagggtcccgagctgttgaccatgtggttt 44827 Query: 442 ggtga 446 ||||| Sbjct: 44828 ggtga 44832 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 gttggtgctgatcttgctgctctttgtaccgaggctgctctccagtgcattcgtgagaag 63 ||||| |||||| | ||||| || ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 44390 gttggggctgatatggctgcactgtgtacagaagctgcgctccagtgcatccgtgaaaag 44449 Query: 64 atgga 68 ||||| Sbjct: 44450 atgga 44454
>gb|DQ145271.1| Drosophila miranda neo-Y TER94 gene, partial sequence Length = 1221 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| || || || ||||||||||| ||||||||| ||||||| || |||| Sbjct: 641 tggccaaggccatcgccaacgagtgccaggcaaacttcatctccgtcaaggggcccgagc 700 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 701 tgctgaccatgtggtt 716 Score = 40.1 bits (20), Expect = 6.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 246 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 305 ||||||||||||| ||||||||||| || |||||||| || || ||| |||||||| Sbjct: 522 ggagctgcaggagctggtccagtacccagtcgagcatcccgacaagttcctcaagtttgg 581 Query: 306 catg 309 |||| Sbjct: 582 catg 585
>ref|XM_708910.1| Candida albicans SC5314 hypothetical protein (CaO19.9876), mRNA Length = 2481 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 162 caacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagatat 221 |||||||||||| | |||||||||||||||||| | |||||| ||||||| ||||| Sbjct: 1410 caacccatctgccttgcgtgaaactgttgttgaaaatgttaatgtcacttgggatgatat 1469 Query: 222 tggtggtctgga 233 ||||||| |||| Sbjct: 1470 tggtggtttgga 1481
>ref|XM_708852.1| Candida albicans SC5314 hypothetical protein (CaO19.2340), mRNA Length = 2481 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 162 caacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagatat 221 |||||||||||| | |||||||||||||||||| | |||||| ||||||| ||||| Sbjct: 1410 caacccatctgccttgcgtgaaactgttgttgaaaatgttaatgtcacttgggatgatat 1469 Query: 222 tggtggtctgga 233 ||||||| |||| Sbjct: 1470 tggtggtttgga 1481
>ref|XM_747195.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g09210) partial mRNA Length = 2355 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 397 aacttcatcagtatcaagggacctgagctgct 428 |||||||||||| ||||||||||||||||||| Sbjct: 1753 aacttcatcagtgtcaagggacctgagctgct 1784
>emb|Z98533.1|SPAC6F12 S.pombe chromosome I cosmid c6F12 Length = 44658 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 160 agcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagat 219 ||||| || |||||| | |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 286 agcaatccttctgctttgcgtgaaaccgttgtggaagttcccaatgttcgttgggaagac 345 Query: 220 attggtgg 227 |||||||| Sbjct: 346 attggtgg 353 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 412 aagggacctgagctgcttaccatgtggtttggtgag 447 |||||||| || |||||| |||||||||||||||| Sbjct: 538 aagggacccgaattgcttagcatgtggtttggtgag 573
>ref|NM_165726.1| Drosophila melanogaster TER94 CG2331-RB, transcript variant B (TER94), mRNA Length = 1458 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 133 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 192 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 193 tgctgaccatgtggtt 208
>ref|NM_058021.3| Drosophila melanogaster TER94 CG2331-RA, transcript variant A (TER94), mRNA Length = 3018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 1697 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 1756 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 1757 tgctgaccatgtggtt 1772
>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR06J01, complete sequence Length = 172904 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 46953 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 47012 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 47013 tgctgaccatgtggtt 47028
>ref|NM_001018717.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1565.08), partial mRNA Length = 2448 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 160 agcaacccatctgctctccgtgaaactgttgttgaagttcccaatgtctcttgggaagat 219 ||||| || |||||| | |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 1435 agcaatccttctgctttgcgtgaaaccgttgtggaagttcccaatgttcgttgggaagac 1494 Query: 220 attggtgg 227 |||||||| Sbjct: 1495 attggtgg 1502 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 412 aagggacctgagctgcttaccatgtggtttggtgag 447 |||||||| || |||||| |||||||||||||||| Sbjct: 1687 aagggacccgaattgcttagcatgtggtttggtgag 1722
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 158400 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 158459 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 158460 tgctgaccatgtggtt 158475
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 144246 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 144305 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 144306 tgctgaccatgtggtt 144321
>gb|BT001521.1| Drosophila melanogaster LP12034 full insert cDNA Length = 1473 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 424 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 134 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 193 Query: 425 tgcttaccatgtggtt 440 |||| ||||||||||| Sbjct: 194 tgctgaccatgtggtt 209
>ref|XM_454038.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E02002g predicted mRNA Length = 3003 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgc 380 |||| |||||||| |||||||| ||||||||||||||| || ||||||||||| Sbjct: 2213 ttcttttctatggacctcctgggactggtaaaaccttgttagcgaaggcaattgc 2267
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 326 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgc 380 |||| |||||||| |||||||| ||||||||||||||| || ||||||||||| Sbjct: 188604 ttcttttctatggacctcctgggactggtaaaaccttgttagcgaaggcaattgc 188550
>emb|CT033065.1| Platynereis dumerilii EST IB0AAA27BE08EM1 Length = 895 Score = 54.0 bits (27), Expect = 4e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 329 tgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagt 388 ||||||| ||||| ||||| |||||||| ||| | || |||||||| || || || |||| Sbjct: 498 tgttctacggcccccctggttgtggtaagaccctcttagccaaggccatcgccaacgagt 557 Query: 389 gccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 443 | || || || |||||| |||||||| |||||||| | |||||||||||||| Sbjct: 558 gtcaagccaatttcatctccatcaagggccctgagctcttgaccatgtggtttgg 612
>ref|XM_675431.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7254.2), mRNA Length = 2484 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 262 gtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaa 321 |||||||||||||| || ||||| ||||| ||| ||||||| || |||| ||||| Sbjct: 1555 gtccagtaccctgtcgatcatcccgagaagttccagaagttcggtctgtcaccttctcgc 1614 Query: 322 ggtgttctgttctatggccctcctgg 347 |||||| |||||||||| |||||||| Sbjct: 1615 ggtgttttgttctatggtcctcctgg 1640
>ref|XM_662183.1| Cryptosporidium hominis TU502 cell division cycle protein 48 (Chro.10043) partial mRNA Length = 2445 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 410 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggc 455 |||| ||||| ||||| |||||| | |||||||||||||||||||| Sbjct: 1667 tcaaaggacccgagcttcttaccttatggtttggtgagagtgaggc 1712
>gb|AF202034.1| Drosophila melanogaster endoplasmic reticulum membrane fusion protein (TER94) mRNA, complete cds Length = 2998 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| ||||| || ||||||||||| ||||||||| ||||||| || || ||| Sbjct: 1673 gccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaactg 1732 Query: 427 cttaccatgtggtt 440 || ||||||||||| Sbjct: 1733 ctgaccatgtggtt 1746 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 cgtgaaactgttgttgaagttcccaa 203 |||||||||||||||||||| ||||| Sbjct: 1484 cgtgaaactgttgttgaagtgcccaa 1509
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 367 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 426 |||||||| || || || ||||||||||| ||||||||| ||||||| || |||||| Sbjct: 1573 gccaaggccatcgccaacgagtgccaggcgaacttcatctcggtcaagggcccggagctg 1632 Query: 427 cttaccatgtggtt 440 || ||||||||||| Sbjct: 1633 ctgaccatgtggtt 1646
>ref|XM_507897.1| PREDICTED: Pan troglodytes similar to ATPase family, AAA domain containing 1 (LOC450580), mRNA Length = 1250 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 423 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 478
>ref|XM_421556.1| PREDICTED: Gallus gallus similar to ATPase family, AAA domain containing 1 (LOC423676), mRNA Length = 2045 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 332 tctatggccctcctggatgtggtaaaaccttg 363 |||||||||||||||| ||||| ||||||||| Sbjct: 698 tctatggccctcctggctgtggcaaaaccttg 729
>gb|BC073998.1| Homo sapiens ATPase family, AAA domain containing 1, mRNA (cDNA clone MGC:90254 IMAGE:6199813), complete cds Length = 2792 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 400 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 455
>gb|BC063530.1| Homo sapiens ATPase family, AAA domain containing 1, mRNA (cDNA clone IMAGE:4386512), partial cds Length = 2501 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 288 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 343
>emb|AL834370.1|HSM805442 Homo sapiens mRNA; cDNA DKFZp762C1113 (from clone DKFZp762C1113) Length = 2543 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 242 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 297
>dbj|AK075223.1| Homo sapiens cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to MSP1 PROTEIN HOMOLOG Length = 3034 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 758 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 813
>dbj|AK027506.1| Homo sapiens cDNA FLJ14600 fis, clone NT2RM4002594, moderately similar to MSP1 PROTEIN HOMOLOG Length = 2334 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 57 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 112
>ref|NM_032810.2| Homo sapiens ATPase family, AAA domain containing 1 (ATAD1), mRNA Length = 3034 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 758 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 813
>gb|AF361493.1|AF361493 Homo sapiens FNP001 mRNA, complete cds Length = 2956 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 663 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 718
>emb|BX932475.2| Gallus gallus finished cDNA, clone ChEST629e1 Length = 1417 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 332 tctatggccctcctggatgtggtaaaaccttg 363 |||||||||||||||| ||||| ||||||||| Sbjct: 716 tctatggccctcctggctgtggcaaaaccttg 747
>ref|XM_960868.1| Encephalitozoon cuniculi GB-M1 ATPase (ECU01_1230) partial mRNA Length = 2343 Score = 46.1 bits (23), Expect = 0.10 Identities = 89/111 (80%) Strand = Plus / Plus Query: 246 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 305 ||||||| ||| ||||| ||||| ||||||||| |||| ||||| ||| |||||||| Sbjct: 1473 ggagctgagggaaactgtgcagtatcctgtggagtatcctgagaagttcataaagtttgg 1532 Query: 306 catgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaa 356 ||| | ||| | || ||||| ||||||| || ||||| ||||||||||| Sbjct: 1533 aatgacgcctgctaagggtgtcttgttctacgggcctccgggatgtggtaa 1583
>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome Length = 490885 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgtt 365 ||||||||||| || ||||| ||||||||| ||||||||| ||||| Sbjct: 422051 aaaggtgttctattatatggtcctcctggaactggtaaaacattgtt 422097 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaac 359 ||||||||||| || |||||||| |||||| ||||||||| Sbjct: 168934 aaaggtgttctattgtatggcccccctggaactggtaaaac 168974
>ref|XM_817728.1| Trypanosoma brucei TREU927 valosin-containing protein homolog (Tb10.70.1190) partial mRNA Length = 2343 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 450 ||||| ||||||||| |||||||| || || ||||| || |||||||||||||| | Sbjct: 1573 caggcaaacttcatctccatcaaggggccggaactgctaacgatgtggtttggtgaatct 1632 Query: 451 gaggctaatgt 461 ||||||||||| Sbjct: 1633 gaggctaatgt 1643
>ref|XM_445539.1| Candida glabrata CBS138, CAGL0D02838g partial mRNA Length = 2505 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 335 atggccctcctggatgtggtaaaacct 361 ||||||||||||| ||||||||||||| Sbjct: 713 atggccctcctggttgtggtaaaacct 739
>ref|XM_663100.1| Cryptosporidium hominis TU502 AAA ATPase (Chro.50178) partial mRNA Length = 2073 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 334 tatggccctcctggatgtggtaaaacc 360 |||||||| |||||||||||||||||| Sbjct: 1327 tatggcccccctggatgtggtaaaacc 1353
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 335 atggccctcctggatgtggtaaaacct 361 ||||||||||||| ||||||||||||| Sbjct: 298195 atggccctcctggttgtggtaaaacct 298169
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 46.1 bits (23), Expect = 0.10 Identities = 89/111 (80%) Strand = Plus / Minus Query: 246 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 305 ||||||| ||| ||||| ||||| ||||||||| |||| ||||| ||| |||||||| Sbjct: 147392 ggagctgagggaaactgtgcagtatcctgtggagtatcctgagaagttcataaagtttgg 147333 Query: 306 catgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaa 356 ||| | ||| | || ||||| ||||||| || ||||| ||||||||||| Sbjct: 147332 aatgacgcctgctaagggtgtcttgttctacgggcctccgggatgtggtaa 147282
>ref|XM_626142.1| Cryptosporidium parvum Iowa II nuclear VCP like protein with 2 AAA ATpase domains, transcripts identified by EST (cgd5_2010), partial mRNA Length = 2088 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 334 tatggccctcctggatgtggtaaaacc 360 |||||||| |||||||||||||||||| Sbjct: 1342 tatggcccccctggatgtggtaaaacc 1368
>ref|NM_001021693.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC16E9.10c), partial mRNA Length = 2340 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatga 386 |||||||||||||||||||| ||||||| || || |||||||||| Sbjct: 1600 cctcctggatgtggtaaaactctgttggctaaagcggttgcaaatga 1646
>gb|AF044488.1|AF044488 Trypanosoma brucei valosin-containing protein homolog (VCP) gene, complete cds Length = 2463 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 391 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 450 ||||| ||||||||| |||||||| || || ||||| || |||||||||||||| | Sbjct: 1657 caggcaaacttcatctccatcaaggggccggaactgctaacgatgtggtttggtgaatct 1716 Query: 451 gaggctaatgt 461 ||||||||||| Sbjct: 1717 gaggctaatgt 1727
>emb|Z99759.1|SPBC16E9 S.pombe chromosome II cosmid c16E9 Length = 40065 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 340 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatga 386 |||||||||||||||||||| ||||||| || || |||||||||| Sbjct: 16386 cctcctggatgtggtaaaactctgttggctaaagcggttgcaaatga 16340
>ref|XM_635235.1| Dictyostelium discoideum hypothetical protein (DDB0218364), partial mRNA Length = 2604 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 344 ctggatgtggtaaaaccttgttggccaaggcaattgca 381 ||||||||||||||||||| || || || ||||||||| Sbjct: 776 ctggatgtggtaaaaccttattagcaaaagcaattgca 813
>ref|XM_671123.1| Plasmodium berghei strain ANKA cell division cycle protein (PB000171.02.0) partial mRNA Length = 1500 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 gaaactgttgttgaagttcccaatgt 206 |||||||||||||||||||| ||||| Sbjct: 1399 gaaactgttgttgaagttccaaatgt 1424
>gb|AC022016.7| Homo sapiens chromosome 10 clone RP11-165M8, complete sequence Length = 163031 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Minus Query: 321 aggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 ||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 2494 aggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 2441
>ref|XM_627893.1| Cryptosporidium parvum Iowa II CDC48 like AAA ATpase ortholog,transcripts identified by EST (cgd1_330), partial mRNA Length = 2463 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Plus Query: 410 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggc 455 |||| ||||| || || |||||| | |||||||||||||||||||| Sbjct: 1685 tcaaaggacccgaacttcttaccttatggtttggtgagagtgaggc 1730
>dbj|AK119311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G08, full insert sequence Length = 3224 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 410 tcaagggacctgagctgcttaccatgtggtttggtgag 447 ||||||| || |||||||| ||||||||||| |||||| Sbjct: 1938 tcaagggccccgagctgctgaccatgtggttcggtgag 1975
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 44.1 bits (22), Expect = 0.41 Identities = 79/98 (80%) Strand = Plus / Minus Query: 352 ggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatc 411 ||||| |||||| |||| ||||| | ||||| ||| || | || ||||||||||| | Sbjct: 1157605 ggtaagaccttgctggctaaggctgtggcaaacgagagcaatgcgaacttcatcagcgtg 1157546 Query: 412 aagggacctgagctgcttaccatgtggtttggtgagag 449 ||||| ||||||||||| | || |||| |||||||||| Sbjct: 1157545 aaggggcctgagctgctgagcaagtgggttggtgagag 1157508
>ref|NM_012216.2| Homo sapiens midline 2 (MID2), transcript variant 1, mRNA Length = 2523 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 1525 gccaggctaacttcatcagta 1545
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 ggtaaaaccttgttggccaaggcaattgc 380 |||||||||||| |||||||||| ||||| Sbjct: 906568 ggtaaaaccttgctggccaaggcgattgc 906596
>gb|AY978194.1| Uncultured bacterium clone LJ87 16S ribosomal RNA gene, partial sequence Length = 1347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttgctgctctttgtaccga 35 ||||||||||||||||||||| Sbjct: 1221 tcttgctgctctttgtaccga 1201
>gb|AY978182.1| Uncultured bacterium clone LJ72 16S ribosomal RNA gene, partial sequence Length = 1347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttgctgctctttgtaccga 35 ||||||||||||||||||||| Sbjct: 1221 tcttgctgctctttgtaccga 1201
>gb|AY977964.1| Uncultured bacterium clone LG86 16S ribosomal RNA gene, partial sequence Length = 1347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttgctgctctttgtaccga 35 ||||||||||||||||||||| Sbjct: 1221 tcttgctgctctttgtaccga 1201
>gb|AY977693.1| Uncultured bacterium clone LD48 16S ribosomal RNA gene, partial sequence Length = 1347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttgctgctctttgtaccga 35 ||||||||||||||||||||| Sbjct: 1221 tcttgctgctctttgtaccga 1201
>gb|AY976056.1| Uncultured bacterium clone LU11 16S ribosomal RNA gene, partial sequence Length = 1346 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttgctgctctttgtaccga 35 ||||||||||||||||||||| Sbjct: 1220 tcttgctgctctttgtaccga 1200
>gb|AY916263.1| Uncultured bacterium clone LN56 16S ribosomal RNA gene, partial sequence Length = 1347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttgctgctctttgtaccga 35 ||||||||||||||||||||| Sbjct: 1221 tcttgctgctctttgtaccga 1201
>gb|AY625005.1| Cercopithecus aethiops cell-line Vero Trim1 alpha mRNA, complete cds Length = 2148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 1268 gccaggctaacttcatcagta 1288
>gb|AY557772.1| Saccharomyces cerevisiae clone FLH111206.01X YGR028W gene, complete cds Length = 1089 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 ggatgtggtaaaaccttgttggccaaggc 374 ||||||||||||||| ||||||| ||||| Sbjct: 406 ggatgtggtaaaaccatgttggcgaaggc 434
>ref|XM_976809.1| PREDICTED: Mus musculus midline 2, transcript variant 3 (Mid2), mRNA Length = 2217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 1046 gccaggctaacttcatcagta 1066
>ref|XM_976732.1| PREDICTED: Mus musculus midline 2, transcript variant 1 (Mid2), mRNA Length = 2695 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 1268 gccaggctaacttcatcagta 1288
>ref|XM_534778.2| PREDICTED: Canis familiaris similar to ATPase family, AAA domain containing 1 (LOC477584), mRNA Length = 1277 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 322 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 |||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 553 ggtgttcttctctatgggcctccagggtgtggtaaaacgttgattgccaaggc 605
>ref|XM_742141.1| Aspergillus fumigatus Af293 AAA family ATPase (Afu8g04270) partial mRNA Length = 4965 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tgctctttgtaccgaggctgctctc 45 |||||||||||| |||||||||||| Sbjct: 2376 tgctctttgtacagaggctgctctc 2400
>gb|BC054287.1| Xenopus laevis protease (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:64535 IMAGE:6878698), complete cds Length = 1595 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 352 ggtaaaaccttgttggccaaggcaattgcaaat 384 |||||||| ||||||||||| ||| |||||||| Sbjct: 722 ggtaaaacattgttggccaaagcagttgcaaat 754
>ref|XM_645469.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (211.t00004) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 atggccctcctggatgtggtaaaac 359 |||| |||||||||||||||||||| Sbjct: 242 atggacctcctggatgtggtaaaac 266
>ref|XM_502194.1| Yarrowia lipolytica CLIB122, YALI0C23749g predicted mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 334 tatggccctcctggatgtggtaaaaccttgttggccaaggc 374 |||||||||||||| ||||| || ||| || |||||||||| Sbjct: 460 tatggccctcctggctgtggaaagaccatgctggccaaggc 500
>emb|Z46259.1|SCRPD3COS S.cerevisiae FY1676 RPD3 gene Length = 40050 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 440 ttggtgagagtgaggctaatgtgcg 464 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|Z72813.1|SCYGR028W S.cerevisiae chromosome VII reading frame ORF YGR028w Length = 9393 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 ggatgtggtaaaaccttgttggccaaggc 374 ||||||||||||||| ||||||| ||||| Sbjct: 8150 ggatgtggtaaaaccatgttggcgaaggc 8178
>emb|Z71605.1|SCYNL329C S.cerevisiae chromosome XIV reading frame ORF YNL329c Length = 4135 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 440 ttggtgagagtgaggctaatgtgcg 464 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|Z48502.1|SC9532X S.cerevisiae chromosome XIII cosmid 9532 Length = 24105 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 tttggtgagagtgaggctaat 459 ||||||||||||||||||||| Sbjct: 12805 tttggtgagagtgaggctaat 12825
>emb|X81069.1|SCYTA4 S.cerevisiae YTA4 gene Length = 2429 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 ggatgtggtaaaaccttgttggccaaggc 374 ||||||||||||||| ||||||| ||||| Sbjct: 1123 ggatgtggtaaaaccatgttggcgaaggc 1151
>emb|X83226.1|SCDNANO S.cerevisiae chromosome XIV, N0295, N0300, N0305 & N0310 genes Length = 8223 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 440 ttggtgagagtgaggctaatgtgcg 464 ||||||||||||| ||||||||||| Sbjct: 6228 ttggtgagagtgaagctaatgtgcg 6204
>emb|X68055.1|SCMSPERV S.cerevisiae genes for MSP1 and ERV1 proteins, and tRNA-Glu Length = 2930 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 ggatgtggtaaaaccttgttggccaaggc 374 ||||||||||||||| ||||||| ||||| Sbjct: 956 ggatgtggtaaaaccatgttggcgaaggc 984
>emb|CR857582.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1150 (from clone DKFZp459M1150) Length = 4069 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 322 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 |||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 517 ggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 569
>gb|AE010137.1| Pyrococcus furiosus DSM 3638, section 12 of 173 of the complete genome Length = 11952 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 325 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaat 377 |||||| ||||||| || ||||||||||| ||||| || |||| |||||||| Sbjct: 11362 gttctgctctatggaccacctggatgtggaaaaactttaatggctaaggcaat 11310
>ref|XM_686405.1| PREDICTED: Danio rerio similar to two AAA domain containing protein (LOC563039), partial mRNA Length = 3185 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 tctgttctatggccctcctgg 347 ||||||||||||||||||||| Sbjct: 1369 tctgttctatggccctcctgg 1389
>dbj|AK039479.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330048M13 product:midline 2, full insert sequence Length = 2069 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 900 gccaggctaacttcatcagta 920
>ref|XM_343825.2| PREDICTED: Rattus norvegicus similar to Trim1 alpha (LOC363502), mRNA Length = 2680 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 1682 gccaggctaacttcatcagta 1702
>emb|Y18880.1|HOS18880 Homo sapiens mRNA for MID2 protein Length = 2524 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 1525 gccaggctaacttcatcagta 1545
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 ggtaaaaccttgttggccaaggcaattgc 380 |||||||||||||||||||| || ||||| Sbjct: 817519 ggtaaaaccttgttggccaaagccattgc 817547
>emb|BX470203.6| Mouse DNA sequence from clone RP23-290J11 on chromosome X, complete sequence Length = 53518 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 19705 gccaggctaacttcatcagta 19725
>emb|AJ408208.1|UEQ408208 Uncultured equine intestinal eubacterium sp. MW21 partial 16S rRNA gene, clone MW21 Length = 672 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttgctgctctttgtaccga 35 ||||||||||||||||||||| Sbjct: 455 tcttgctgctctttgtaccga 435
>emb|AL034399.6|HS191P20 Human DNA sequence from clone RP6-191P20 on chromosome Xq23 Contains the TEX13B gene for testis expressed sequence 13B, a novel pseudogene, the 3' end of the MID2 gene for midline 2 (FXY2, RNF60, TRIM1), a novel gene and a CpG island, complete sequence Length = 118456 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gccaggctaacttcatcagta 409 ||||||||||||||||||||| Sbjct: 86501 gccaggctaacttcatcagta 86481
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 334 tatggccctcctggatgtggtaaaaccttgttggccaaggc 374 |||||||||||||| ||||| || ||| || |||||||||| Sbjct: 3186566 tatggccctcctggctgtggaaagaccatgctggccaaggc 3186606
>gb|L20789.1|YSCPAS8A Yeast PAS8 gene, complete cds Length = 3807 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 440 ttggtgagagtgaggctaatgtgcg 464 ||||||||||||| ||||||||||| Sbjct: 2887 ttggtgagagtgaagctaatgtgcg 2911
>ref|NM_125968.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT5G65710 mRNA, complete cds Length = 2982 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccgtgaaactgttgttgaag 196 |||||||||||||||||||| Sbjct: 1057 ccgtgaaactgttgttgaag 1038
>gb|BT016035.1| Drosophila melanogaster RE01104 full insert cDNA Length = 1442 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 343 cctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| |||||| || |||||||||| Sbjct: 620 cctggatgtggcaaaaccatgctggccaaggc 651
>ref|XM_872132.1| PREDICTED: Bos taurus similar to ATPase family, AAA domain containing 1, transcript variant 2 (LOC506045), mRNA Length = 2417 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 |||||||| || ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 296 aaaggtgtgcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 351
>ref|XM_582436.2| PREDICTED: Bos taurus similar to ATPase family, AAA domain containing 1, transcript variant 1 (LOC506045), mRNA Length = 2674 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 319 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 374 |||||||| || ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 446 aaaggtgtgcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 501
>gb|AY815849.1| Schistosoma japonicum SJCHGC09453 protein mRNA, complete cds Length = 2882 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 190 gttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacg 245 |||||||||||||| || | ||||| ||||| ||||| || |||||||| ||||| Sbjct: 1433 gttgaagttcccaacgtgacatgggatgatatcggtgggctagaaaatgtgaaacg 1488
>ref|XM_448116.1| Candida glabrata CBS138, CAGL0J09350g partial mRNA Length = 2493 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 52 attcgtgagaagatggacattatagatcttga 83 |||||||||||||||||| | || |||||||| Sbjct: 1297 attcgtgagaagatggacttgatcgatcttga 1328
>gb|AC015884.15| Homo sapiens chromosome 17, clone RP11-216P6, complete sequence Length = 207661 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 tctccgtgaaactgttgttgaagt 197 ||||||||| |||||||||||||| Sbjct: 126819 tctccgtgatactgttgttgaagt 126796
>gb|AY223282.1| Schistosoma japonicum clone ZZD502 mRNA sequence Length = 1642 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 190 gttgaagttcccaatgtctcttgggaagatattggtggtctggaaaatgtcaaacg 245 |||||||||||||| || | ||||| ||||| ||||| || |||||||| ||||| Sbjct: 1393 gttgaagttcccaacgtgacatgggatgatatcggtgggctagaaaatgtgaaacg 1448
>ref|XM_961086.1| Plasmodium falciparum 3D7 cell division cycle protein 48 (PFF0940c) partial mRNA Length = 2421 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggt 228 ||||||||||| |||||||| ||||| ||||| |||||||||||| Sbjct: 1339 gaaactgttgtagaagttccaaatgtgaaatgggatgatattggtggt 1386
>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence Length = 89884 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gccaaggcaattgcaaatga 386 |||||||||||||||||||| Sbjct: 79187 gccaaggcaattgcaaatga 79168
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 181 gaaactgttgttgaagttcccaatgtctcttgggaagatattggtggt 228 ||||||||||| |||||||| ||||| ||||| |||||||||||| Sbjct: 119209 gaaactgttgtagaagttccaaatgtgaaatgggatgatattggtggt 119162
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 52 attcgtgagaagatggacattatagatcttga 83 |||||||||||||||||| | || |||||||| Sbjct: 921090 attcgtgagaagatggacttgatcgatcttga 921059
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gcatgtccccttccaaaggt 324 |||||||||||||||||||| Sbjct: 1342747 gcatgtccccttccaaaggt 1342728
>emb|AL157991.1|SPCC24B10 S.pombe chromosome III cosmid c24B10 Length = 40751 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 cctcctggatgtggtaaaac 359 |||||||||||||||||||| Sbjct: 17530 cctcctggatgtggtaaaac 17511
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgtgaaactgttgttgaag 196 |||||||||||||||||||| Sbjct: 73997 ccgtgaaactgttgttgaag 74016
>gb|AC087385.5| Homo sapiens chromosome 15, clone RP11-745A24, complete sequence Length = 190890 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gtcaaacgggagctgcagga 257 |||||||||||||||||||| Sbjct: 156031 gtcaaacgggagctgcagga 156012
>gb|AY113319.1| Drosophila melanogaster AT28212 full insert cDNA Length = 1234 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 343 cctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| |||||| || |||||||||| Sbjct: 467 cctggatgtggcaaaaccatgctggccaaggc 498
>ref|NM_169308.2| Drosophila melanogaster Rpt3R CG9475-RB, transcript variant B (Rpt3R), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 343 cctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| |||||| || |||||||||| Sbjct: 571 cctggatgtggcaaaaccatgctggccaaggc 602
>dbj|AP003603.1| Nostoc sp. PCC 7120 plasmid pCC7120gamma DNA, complete sequence Length = 101965 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cctggatgtggtaaaacctt 362 |||||||||||||||||||| Sbjct: 12161 cctggatgtggtaaaacctt 12180
>ref|NM_141681.1| Drosophila melanogaster Rpt3R CG9475-RA, transcript variant A (Rpt3R), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 343 cctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| |||||| || |||||||||| Sbjct: 667 cctggatgtggcaaaaccatgctggccaaggc 698
>ref|NM_001023004.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC24B10.10c), partial mRNA Length = 1068 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cctcctggatgtggtaaaac 359 |||||||||||||||||||| Sbjct: 397 cctcctggatgtggtaaaac 416
>gb|AC008316.3|AC008316 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone BACR23O04, complete sequence Length = 160817 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 cctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| |||||| || |||||||||| Sbjct: 30121 cctggatgtggcaaaaccatgctggccaaggc 30090
>gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, region 85E-85E, BAC clone BACR30F01, complete sequence Length = 177028 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 cctggatgtggtaaaaccttgttggccaaggc 374 ||||||||||| |||||| || |||||||||| Sbjct: 137274 cctggatgtggcaaaaccatgctggccaaggc 137243
>dbj|AK214275.1| Mus musculus cDNA, clone:Y2G0131E10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 332 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 gatgagaccatagatgctgagatactgaattccatggctgttac 128 ||||||||||| ||||||||| | |||||||| |||| ||||| Sbjct: 172 gatgagaccattgatgctgaggtcatgaattccctggcagttac 215 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,255,448 Number of Sequences: 3902068 Number of extensions: 4255448 Number of successful extensions: 82182 Number of sequences better than 10.0: 258 Number of HSP's better than 10.0 without gapping: 255 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 81343 Number of HSP's gapped (non-prelim): 803 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
