ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet23f07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009194.1| Triticum aestivum clone wle1.pk0002.c10:fis, full insert mRNA sequence Length = 1291 Score = 587 bits (296), Expect = e-164 Identities = 361/383 (94%) Strand = Plus / Plus Query: 92 atcgtccaagctccgccgcctccgcggggcctcgccgtggccaggagagcagtgcgctgc 151 ||||||| ||||||||||||||||||||||||||||| |||||||||| |||| |||||| Sbjct: 29 atcgtccgagctccgccgcctccgcggggcctcgccggggccaggagatcagtccgctgc 88 Query: 152 tgcagcagcgccgctcccaccggcgcctccacatccaagctcgtcctggaggtcaaggag 211 |||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||| Sbjct: 89 tgcagcagcgccgctcccgcaggcgcctccacatccaagctcgtcctggaggtgaaagag 148 Query: 212 aggctccaaagggagcatccgggcctcccgacggggacaagcggcagggatgacgacgag 271 |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 149 aggctcgaaagggagcatccgggcctcccgacgggcaggagcggcagggatgacgacgag 208 Query: 272 atgatcctctggttcttgaaggacaggaagttcgccgtcgacgaagccgtctccaagctg 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 atgatcctctggttcttgaaggacaggaagttcgccgtcgacgaagccgtctccaagctg 268 Query: 332 gccaaggccatcaaatggcgtcaggattttcacgtgtcggaattatcagaagaatcagtg 391 ||||||||||||||||||||||||||||| | | |||| ||| ||||||||||||||||| Sbjct: 269 gccaaggccatcaaatggcgtcaggatttccgcttgtcagaactatcagaagaatcagtg 328 Query: 392 aaagggttgtaccaaactggncaggcatatgtgcatgattcttttgacatcaacggcagg 451 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 329 aaagggttgtaccaaactggcaaggcatatgtgcatgattcttttgacatcaacggcagg 388 Query: 452 cctgtgctaatagtagtcgcagc 474 |||||| || ||||||| ||||| Sbjct: 389 cctgtgttagtagtagtggcagc 411
>dbj|AK064540.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-A04, full insert sequence Length = 1587 Score = 250 bits (126), Expect = 4e-63 Identities = 242/281 (86%) Strand = Plus / Plus Query: 185 tccaagctcgtcctggaggtcaaggagaggctccaaagggagcatccgggcctcccgacg 244 |||||||||||| |||||||||| || |||| | |||||||||||||||||||||||| Sbjct: 538 tccaagctcgtcttggaggtcaaagaacggctggagagggagcatccgggcctcccgacg 597 Query: 245 gggacaagcggcagggatgacgacgagatgatcctctggttcttgaaggacaggaagttc 304 || | | ||| |||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 598 ggcaggaacgggagggatgatgaggagatgatcctctggttcttgaaggacaggaagctc 657 Query: 305 gccgtcgacgaagccgtctccaagctggccaaggccatcaaatggcgtcaggattttcac 364 ||||||| ||| | || || || ||| |||||||||| |||||||| ||||||||||| Sbjct: 658 tccgtcgatgaaacagtttctaaactgaccaaggccattaaatggcgccaggattttcaa 717 Query: 365 gtgtcggaattatcagaagaatcagtgaaagggttgtaccaaactggncaggcatatgtg 424 || || ||||||||||||||||| || ||||||||||| |||||||| | ||||||||| Sbjct: 718 gtctcagaattatcagaagaatcggttaaagggttgtatcaaactggcaaagcatatgtg 777 Query: 425 catgattcttttgacatcaacggcaggcctgtgctaatagt 465 |||||||||||||||||| | || || ||||||||| |||| Sbjct: 778 catgattcttttgacatctatggtagacctgtgctagtagt 818
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 1e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 344 aaatggcgtcaggattttcacgtgtcggaattatcagaagaatcagtgaaagggttgtac 403 |||||||| ||||||||||| || || ||||||||||||||||| || ||||||||||| Sbjct: 12846954 aaatggcgccaggattttcaagtctcagaattatcagaagaatcggttaaagggttgtat 12847013 Query: 404 caaactggncaggcatatgtgcatgattcttttgacatcaacggcaggcctgtgctaata 463 |||||||| | ||||||||||||||||||||||||||| | || || ||||||||| || Sbjct: 12847014 caaactggcaaagcatatgtgcatgattcttttgacatctatggtagacctgtgctagta 12847073 Query: 464 gt 465 || Sbjct: 12847074 gt 12847075 Score = 125 bits (63), Expect = 1e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 188 aagctcgtcctggaggtcaaggagaggctccaaagggagcatccgggcctcccgacgggg 247 ||||||||| |||||||||| || |||| | |||||||||||||||||||||||||| Sbjct: 12846208 aagctcgtcttggaggtcaaagaacggctggagagggagcatccgggcctcccgacgggc 12846267 Query: 248 acaagcggcagggatgacgacgagatgatcctctggttcttgaaggacaggaagttcgcc 307 | | ||| |||||||| || ||||||||||||||||||||||||||||||||| || || Sbjct: 12846268 aggaacgggagggatgatgaggagatgatcctctggttcttgaaggacaggaagctctcc 12846327 Query: 308 gtcgacgaagccgtctccaagctggccaaggccat 342 ||||| ||| | || || || ||| |||||||||| Sbjct: 12846328 gtcgatgaaacagtttctaaactgaccaaggccat 12846362 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 7490438 agagcagagcagagcagagg 7490419 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 4208715 aagagcagagcagagcagag 4208696
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 125 bits (63), Expect = 1e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 344 aaatggcgtcaggattttcacgtgtcggaattatcagaagaatcagtgaaagggttgtac 403 |||||||| ||||||||||| || || ||||||||||||||||| || ||||||||||| Sbjct: 66436 aaatggcgccaggattttcaagtctcagaattatcagaagaatcggttaaagggttgtat 66495 Query: 404 caaactggncaggcatatgtgcatgattcttttgacatcaacggcaggcctgtgctaata 463 |||||||| | ||||||||||||||||||||||||||| | || || ||||||||| || Sbjct: 66496 caaactggcaaagcatatgtgcatgattcttttgacatctatggtagacctgtgctagta 66555 Query: 464 gt 465 || Sbjct: 66556 gt 66557 Score = 125 bits (63), Expect = 1e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 188 aagctcgtcctggaggtcaaggagaggctccaaagggagcatccgggcctcccgacgggg 247 ||||||||| |||||||||| || |||| | |||||||||||||||||||||||||| Sbjct: 65690 aagctcgtcttggaggtcaaagaacggctggagagggagcatccgggcctcccgacgggc 65749 Query: 248 acaagcggcagggatgacgacgagatgatcctctggttcttgaaggacaggaagttcgcc 307 | | ||| |||||||| || ||||||||||||||||||||||||||||||||| || || Sbjct: 65750 aggaacgggagggatgatgaggagatgatcctctggttcttgaaggacaggaagctctcc 65809 Query: 308 gtcgacgaagccgtctccaagctggccaaggccat 342 ||||| ||| | || || || ||| |||||||||| Sbjct: 65810 gtcgatgaaacagtttctaaactgaccaaggccat 65844
>gb|AC040978.8| Homo sapiens chromosome 8, clone RP11-570L14, complete sequence Length = 180983 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 gggaagagcagagcagagcagag 61 ||||||||||||||||||||||| Sbjct: 174728 gggaagagcagagcagagcagag 174706
>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence Length = 182542 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 31 agggaaaggggaagagcagagcagagc 57 |||||||||||||||| |||||||||| Sbjct: 139186 agggaaaggggaagagaagagcagagc 139160
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagaggcg 64 |||||||||||||||||||||| Sbjct: 31130 agagcagagcagagcagaggcg 31109
>ref|XM_418057.1| PREDICTED: Gallus gallus similar to gamma filamin protein (LOC419936), mRNA Length = 2370 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 ggaagagcagagcagagcagag 61 |||||||||||||||||||||| Sbjct: 555 ggaagagcagagcagagcagag 534
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggcg 64 |||||||||||||||||||||| Sbjct: 15306218 agagcagagcagagcagaggcg 15306239
>emb|AL645803.19| Mouse DNA sequence from clone RP23-119N24 on chromosome 11 Contains the 5' end of the Ddc gene for dopa decarboxylase, a novel gene and the 3' end of the Grb10 gene for growth factor receptor bound protein 10, complete sequence Length = 128744 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 ggaagagcagagcagagcagag 61 |||||||||||||||||||||| Sbjct: 42261 ggaagagcagagcagagcagag 42240
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggcg 64 |||||||||||||||||||||| Sbjct: 15300752 agagcagagcagagcagaggcg 15300773
>dbj|AK105057.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C07, full insert sequence Length = 2283 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggcg 64 |||||||||||||||||||||| Sbjct: 149 agagcagagcagagcagaggcg 170
>dbj|AK100539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102F06, full insert sequence Length = 2472 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggcg 64 |||||||||||||||||||||| Sbjct: 193 agagcagagcagagcagaggcg 214
>dbj|AK099666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067D14, full insert sequence Length = 2166 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggcg 64 |||||||||||||||||||||| Sbjct: 69 agagcagagcagagcagaggcg 90
>gb|AY103824.1| Zea mays PCO135715 mRNA sequence Length = 1388 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagaggcg 64 |||||||||||||||||||||| Sbjct: 149 agagcagagcagagcagaggcg 128
>gb|AC120405.7| Mus musculus chromosome 1, clone RP24-409F22, complete sequence Length = 158876 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 53360 gaagagcagagcagagcagag 53340
>gb|AC107839.14| Mus musculus chromosome 7, clone RP23-284K1, complete sequence Length = 170751 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 73671 gaagagcagagcagagcagag 73651
>ref|XM_476952.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2870 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccaagctccgccgcctccgcg 117 ||||||||||||||||||||| Sbjct: 1003 ccaagctccgccgcctccgcg 1023
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence Length = 210696 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 110181 gaagagcagagcagagcagag 110201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 110208 agagcagagcagagcagagg 110227
>gb|AC160543.13| Mus musculus chromosome 1, clone RP23-186L22, complete sequence Length = 212353 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 163115 gaagagcagagcagagcagag 163135
>gb|AF529186.1| Taenia solium U6 snRNA and U5 snRNA genes, complete sequence Length = 1009 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 645 gaagagcagagcagagcagag 625
>gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, complete sequence Length = 165330 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 127506 gaagagcagagcagagcagag 127526
>gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome 12, complete sequence Length = 227238 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 131695 gaagagcagagcagagcagag 131675
>gb|AC159817.2| Mus musculus BAC clone RP23-228E8 from chromosome 9, complete sequence Length = 193445 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 120884 gaagagcagagcagagcagag 120904 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggcgat 66 ||||||||||||||||||| |||| Sbjct: 120936 agagcagagcagagcagagacgat 120959
>gb|AC107823.11| Mus musculus chromosome 8, clone RP23-184K1, complete sequence Length = 190966 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 166602 gaagagcagagcagagcagag 166582
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 134454 agagcagagcagagcagaggc 134474
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 88705 agagcagagcagagcagaggc 88725
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ttcgccgtcgacgaagccgtc 322 ||||||||||||||||||||| Sbjct: 2254698 ttcgccgtcgacgaagccgtc 2254718
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgtggccaggagagcagtgcg 147 ||||||||||||||||||||| Sbjct: 1260457 cgtggccaggagagcagtgcg 1260477
>gb|AC123048.4| Mus musculus BAC clone RP24-394D5 from chromosome 18, complete sequence Length = 148673 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 42337 gaagagcagagcagagcagag 42317
>gb|AF228660.5| Homo sapiens chromosome 8 clone RP11-37N22 map q24.13, complete sequence Length = 182016 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 aagagcagagcagagcagagg 62 ||||||||||||||||||||| Sbjct: 125741 aagagcagagcagagcagagg 125721
>gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, complete sequence Length = 187677 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 168285 gaagagcagagcagagcagag 168305
>gb|AC161246.2| Mus musculus BAC clone RP24-421E18 from chromosome 9, complete sequence Length = 201524 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 125724 gaagagcagagcagagcagag 125744
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence Length = 216041 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 101593 agagcagagcagagcagaggc 101613
>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence Length = 223362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 134794 agagcagagcagagcagaggc 134774
>gb|AC124487.3| Mus musculus BAC clone RP23-452B18 from chromosome 19, complete sequence Length = 195185 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 44062 gaagagcagagcagagcagag 44042
>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence Length = 213684 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 206400 gaagagcagagcagagcagag 206420
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 138499 agagcagagcagagcagaggc 138479
>emb|BX936288.8| Platypus DNA sequence from clone XX-534O22, complete sequence Length = 153564 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 agggaaaggggaagagcagag 51 ||||||||||||||||||||| Sbjct: 16241 agggaaaggggaagagcagag 16261
>gb|AC137845.9| Mus musculus chromosome 1, clone RP23-430H22, complete sequence Length = 213882 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 20575 gaagagcagagcagagcagag 20595
>gb|AC165265.2| Mus musculus BAC clone RP23-15M14 from chromosome 13, complete sequence Length = 237830 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 5566 gaagagcagagcagagcagag 5546
>emb|AL356256.11| Human DNA sequence from clone RP11-327P22 on chromosome 1, complete sequence Length = 20653 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 968 agagcagagcagagcagaggc 988
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 ccaagctggccaaggccatca 344 ||||||||||||||||||||| Sbjct: 640776 ccaagctggccaaggccatca 640756
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ttcgccgtcgacgaagccgtc 322 ||||||||||||||||||||| Sbjct: 416043 ttcgccgtcgacgaagccgtc 416063
>emb|AL603711.6| Mouse DNA sequence from clone RP23-381B19 on chromosome 11 Contains the 3' end of the Slfn3 gene for schlafen 3, a novel gene, two schlafen (Slfn) pseudogenes, the Pex12 gene for peroxisomal biogenesis factor 12 and the Ap2b1 gene for adaptor-related protein complex 2 beta 1 subunit, complete sequence Length = 204523 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 121244 gaagagcagagcagagcagag 121224
>emb|AL606661.23| Mouse DNA sequence from clone RP23-355P23 on chromosome 11 Contains a ubiquitin C (Ubc) pseudogene, complete sequence Length = 91585 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 87551 gaagagcagagcagagcagag 87571
>emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in linkage group 10, complete sequence Length = 97299 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 agagcagagcagagcagaggcgatg 67 ||||||||||||||||||| ||||| Sbjct: 54516 agagcagagcagagcagagtcgatg 54492
>gb|AC163014.5| Mus musculus chromosome 8, clone RP23-216D14, complete sequence Length = 208407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 204363 gaagagcagagcagagcagag 204383 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 204318 gaagagcagagcagagcagag 204338
>gb|AC159242.2| Mus musculus BAC clone RP24-325A23 from chromosome 13, complete sequence Length = 193570 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 12884 gaagagcagagcagagcagag 12904
>gb|AC124036.5| Mus Musculus Strain C57BL6/J chromosome 11 BAC Clone RP24-100D7, Complete Sequence, complete sequence Length = 228907 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 31104 gaagagcagagcagagcagag 31124
>gb|AC099565.2| Homo sapiens chromosome 1 clone RP4-651I17, complete sequence Length = 108078 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 107046 agagcagagcagagcagaggc 107066
>gb|AC090921.7| Homo sapiens chromosome 8, clone RP11-37N22, complete sequence Length = 182041 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagagg 62 ||||||||||||||||||||| Sbjct: 56279 aagagcagagcagagcagagg 56299
>gb|AC160534.5| Mus musculus chromosome 7, clone RP24-265E12, complete sequence Length = 176921 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 12666 agagcagagcagagcagaggc 12646
>gb|AC102298.14| Mus musculus chromosome 7, clone RP24-396N13, complete sequence Length = 187811 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 137406 agagcagagcagagcagaggc 137426
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 ttcgccgtcgacgaagccgtc 322 ||||||||||||||||||||| Sbjct: 1572202 ttcgccgtcgacgaagccgtc 1572182
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 5001495 gaagagcagagcagagcagag 5001515 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccaagctccgccgcctccgcg 117 ||||||||||||||||||||| Sbjct: 4854462 ccaagctccgccgcctccgcg 4854482
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 22779255 agagcagagcagagcagaggc 22779275
>gb|AC116174.3| Homo sapiens BAC clone RP11-115I3 from 4, complete sequence Length = 83178 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aggggaagagcagagcagagc 57 ||||||||||||||||||||| Sbjct: 64615 aggggaagagcagagcagagc 64635
>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete sequence Length = 207534 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 114611 gaagagcagagcagagcagag 114631
>gb|AC007386.3| Homo sapiens BAC clone RP11-359K10 from 2, complete sequence Length = 176742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 133877 agagcagagcagagcagaggc 133897 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 133871 aagagcagagcagagcagag 133890
>gb|AE004532.1| Pseudomonas aeruginosa PAO1, section 93 of 529 of the complete genome Length = 14423 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 5161 gaagagcagagcagagcagag 5181
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 43184 gaagagcagagcagagcagag 43204
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccaagctccgccgcctccgcg 117 ||||||||||||||||||||| Sbjct: 39946 ccaagctccgccgcctccgcg 39966
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccaagctccgccgcctccgcg 117 ||||||||||||||||||||| Sbjct: 128975 ccaagctccgccgcctccgcg 128995
>gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, complete sequence Length = 147102 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 123403 gaagagcagagcagagcagag 123423
>dbj|AK101942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074I19, full insert sequence Length = 2127 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 23 agagcagagcagagcagaggc 3
>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence Length = 188569 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 68075 gaagagcagagcagagcagag 68095
>dbj|AK100909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G24, full insert sequence Length = 2870 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccaagctccgccgcctccgcg 117 ||||||||||||||||||||| Sbjct: 1003 ccaagctccgccgcctccgcg 1023
>emb|Z97200.1|HS79C4 Human DNA sequence from clone RP1-79C4 on chromosome 1q24, complete sequence Length = 158549 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 cctggaggtcaaggagaggct 216 ||||||||||||||||||||| Sbjct: 120094 cctggaggtcaaggagaggct 120074
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 acgaagccgtctccaagctgg 332 ||||||||||||||||||||| Sbjct: 3001229 acgaagccgtctccaagctgg 3001249 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 aagctggccaaggccatcaa 345 |||||||||||||||||||| Sbjct: 1885754 aagctggccaaggccatcaa 1885773
>gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, complete sequence Length = 178228 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 118055 gaagagcagagcagagcagag 118075 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 118010 gaagagcagagcagagcagag 118030
>gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, complete sequence Length = 201130 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 114861 gaagagcagagcagagcagag 114881
>emb|AL590988.11| Mouse DNA sequence from clone RP23-46C18 on chromosome 8, complete sequence Length = 183975 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 25649 gaagagcagagcagagcagag 25669
>emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, complete sequence Length = 176982 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagaggc 63 ||||||||||||||||||||| Sbjct: 53458 agagcagagcagagcagaggc 53478
>gb|AC146295.3| Mus musculus BAC clone RP24-134N2 from 8, complete sequence Length = 181261 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 73707 gaagagcagagcagagcagag 73687
>emb|AL935172.8| Mouse DNA sequence from clone RP23-261J24 on chromosome 11, complete sequence Length = 142614 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 91525 gaagagcagagcagagcagag 91545
>emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chromosome 4, complete sequence Length = 207430 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 13033 gaagagcagagcagagcagag 13013
>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete sequence Length = 230634 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcagag 61 ||||||||||||||||||||| Sbjct: 91350 gaagagcagagcagagcagag 91330
>gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, complete sequence Length = 206936 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 85383 agagcagagcagagcagagg 85402
>ref|NM_185497.1| Oryza sativa (japonica cultivar-group), Ozsa8594 predicted mRNA Length = 834 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgtccaagctccgccgcctc 113 |||||||||||||||||||| Sbjct: 228 cgtccaagctccgccgcctc 247
>gb|AC166821.2| Mus musculus BAC clone RP24-68F22 from chromosome 17, complete sequence Length = 202649 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 148751 agagcagagcagagcagagg 148770
>gb|AY022671.1| Oryza sativa microsatellite MRG4996 containing (CCG)X8, closest to marker C421, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 6 aagagcagagcagagcagag 25
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gcgctgctgcagcagcgccg 164 |||||||||||||||||||| Sbjct: 2817943 gcgctgctgcagcagcgccg 2817962
>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence Length = 194241 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 108181 agagcagagcagagcagagg 108200
>ref|XM_429426.1| PREDICTED: Gallus gallus hypothetical gene supported by BX930499 (LOC416429), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 ccgccgcctccgcggggcctcgcc 127 |||||||||||||||||| ||||| Sbjct: 264 ccgccgcctccgcggggcatcgcc 241
>gb|BC058111.1| Mus musculus zinc fingers and homeoboxes 3, mRNA (cDNA clone MGC:67301 IMAGE:6836697), complete cds Length = 4499 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ccgccgcctccgcggggcct 123 |||||||||||||||||||| Sbjct: 91 ccgccgcctccgcggggcct 110
>ref|XM_950689.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B2O8.60 [imported] - Neurospora crassa OR74A ) (NCU01627.1) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 gggaagagcagagcagagcagagg 62 |||||| ||||||||||||||||| Sbjct: 325 gggaagggcagagcagagcagagg 348
>gb|BC068837.1| Xenopus laevis hypothetical protein MGC81482, mRNA (cDNA clone MGC:81482 IMAGE:6636567), complete cds Length = 3937 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 107 agagcagagcagagcagagg 88
>ref|XM_328065.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B2O8.60 [imported] - Neurospora crassa OR74A ) (NCU01627.1) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 gggaagagcagagcagagcagagg 62 |||||| ||||||||||||||||| Sbjct: 325 gggaagggcagagcagagcagagg 348
>ref|NM_177263.3| Mus musculus zinc fingers and homeoboxes 3 (Zhx3), mRNA Length = 4499 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ccgccgcctccgcggggcct 123 |||||||||||||||||||| Sbjct: 91 ccgccgcctccgcggggcct 110
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gcgctgctgcagcagcgccg 164 |||||||||||||||||||| Sbjct: 4045459 gcgctgctgcagcagcgccg 4045478
>ref|XM_676086.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7909.2), mRNA Length = 6312 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccaagctggccaaggccatc 343 |||||||||||||||||||| Sbjct: 3884 ccaagctggccaaggccatc 3903
>gb|AC186169.1| Ornithorhynchus anatinus chromosome UNK clone OABb-2K17, complete sequence Length = 117478 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 cgctgctgcagcagcgccgctccc 169 |||||||||| ||||||||||||| Sbjct: 113842 cgctgctgcatcagcgccgctccc 113819
>gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, complete sequence Length = 232699 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 208632 agagcagagcagagcagagg 208613
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 aagctcgtcctggaggtcaaggag 211 ||||||||||||||||| |||||| Sbjct: 1233124 aagctcgtcctggaggtgaaggag 1233147
>gb|AC159631.2| Mus musculus BAC clone RP24-177F21 from chromosome 12, complete sequence Length = 171538 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 83628 agagcagagcagagcagagg 83647
>gb|AC164155.2| Mus musculus BAC clone RP24-548I6 from chromosome 14, complete sequence Length = 215419 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 127199 agagcagagcagagcagagg 127180
>gb|AC126250.4| Mus musculus BAC clone RP23-452K12 from chromosome 14, complete sequence Length = 194924 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 33999 agagcagagcagagcagagg 33980
>emb|AJ005357.1|ATA005357 Aesculus turbinata microsatellite DNA, locus AT3D6 Length = 744 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 692 aagagcagagcagagcagag 711
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 caagctggccaaggccatca 344 |||||||||||||||||||| Sbjct: 334319 caagctggccaaggccatca 334300
>gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosome 18, complete sequence Length = 179327 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 89615 aagagcagagcagagcagag 89634
>gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosome 8, complete sequence Length = 130946 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 20567 aagagcagagcagagcagag 20548
>gb|AC125080.3| Mus musculus BAC clone RP24-68P23 from chromosome 16, complete sequence Length = 181087 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tcaaggagaggctccaaagg 223 |||||||||||||||||||| Sbjct: 82337 tcaaggagaggctccaaagg 82356
>gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, complete sequence Length = 173805 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 18460 aagagcagagcagagcagag 18479
>gb|AC122831.2| Mus musculus BAC clone RP23-179B10 from 3, complete sequence Length = 204672 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 119067 agagcagagcagagcagagg 119086
>gb|AC004917.2| Homo sapiens PAC clone RP5-892G19 from 7, complete sequence Length = 110233 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 96694 aagagcagagcagagcagag 96675
>gb|AC158569.7| Mus musculus chromosome 7, clone RP24-65P20, complete sequence Length = 177045 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtcaaggagaggctccaa 220 |||||||||||||||||||| Sbjct: 152649 aggtcaaggagaggctccaa 152630
>gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, complete sequence Length = 161532 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 112049 agagcagagcagagcagagg 112030
>gb|AC094784.13| Rattus norvegicus 11 BAC CH230-4O6 (Children's Hospital Oakland Research Institute) complete sequence Length = 228501 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 110384 agagcagagcagagcagagg 110365
>emb|AL162457.11| Human DNA sequence from clone RP11-429E11 on chromosome 20 Contains parts of the CDH4 gene for retinal cadherin 4 type 1 (R-cadherin), a novel gene, the gene for a novel protien (FLJ40547) and a CpG island, complete sequence Length = 130965 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 agggaaaggggaagagcaga 50 |||||||||||||||||||| Sbjct: 90817 agggaaaggggaagagcaga 90836
>emb|AL133411.9| Human DNA sequence from clone RP11-57P14 on chromosome 9p21.1-21.3 Contains the 3' end of the TEK gene for tyrosine kinase, endothelial (venous malformations, multiple cutaneous and mucosal) (TIE2, VMCM, TIE-2, VMCM1), the C9orf11 gene for chromosome 9 open reading frame 11 and the C9orf14 gene for chromosome 9 open reading frame 14, complete sequence Length = 101445 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gagggaaaggggaagagcag 49 |||||||||||||||||||| Sbjct: 93838 gagggaaaggggaagagcag 93857
>gb|AC163388.5| Mus musculus chromosome 1, clone RP24-74P5, complete sequence Length = 208139 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 80820 agagcagagcagagcagagg 80839
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 tgcgctgctgcagcagcgcc 163 |||||||||||||||||||| Sbjct: 144722 tgcgctgctgcagcagcgcc 144741
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 tgcgctgctgcagcagcgcc 163 |||||||||||||||||||| Sbjct: 63926 tgcgctgctgcagcagcgcc 63945
>gb|AC164293.2| Mus musculus BAC clone RP24-208N14 from chromosome 9, complete sequence Length = 166713 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 142585 aagagcagagcagagcagag 142566
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gcgctgctgcagcagcgccg 164 |||||||||||||||||||| Sbjct: 3752048 gcgctgctgcagcagcgccg 3752067
>emb|BX321861.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 6/10 Length = 298050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 271245 agagcagagcagagcagagg 271226
>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete sequence Length = 215657 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 51750 agagcagagcagagcagagg 51731
>emb|AL355930.2|NCB2O8 Neurospora crassa DNA linkage group II BAC clone B2O8 Length = 162671 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 gggaagagcagagcagagcagagg 62 |||||| ||||||||||||||||| Sbjct: 13549 gggaagggcagagcagagcagagg 13572
>emb|AL663082.5| Mouse DNA sequence from clone RP23-327G1 on chromosome 11 Contains the 3' end of the Ankfy1 gene for ankyrin repeat and FYVE domain containing 1, a new gene, the gene for a novel ZZ type zinc finger domain containing protein, the 5' end of the Atp2a3 gene for ubiquitous Ca++ transporting ATPase and two CpG islands, complete sequence Length = 243654 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 117630 agagcagagcagagcagagg 117649 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 117457 agagcagagcagagcagagg 117476 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 117425 agagcagagcagagcagagg 117444 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 117295 agagcagagcagagcagagg 117314 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 117151 agagcagagcagagcagagg 117170 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 117124 agagcagagcagagcagagg 117143
>gb|AC097273.3| Genomic sequence for Mus musculus, clone RP23-118N13, complete sequence Length = 211657 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gaagagcagagcagagcaga 60 |||||||||||||||||||| Sbjct: 104386 gaagagcagagcagagcaga 104367
>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence Length = 256719 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 aggtcaaggagaggctccaa 220 |||||||||||||||||||| Sbjct: 137936 aggtcaaggagaggctccaa 137955
>gb|AC092924.7| Homo sapiens 3 BAC RP11-788A4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155417 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 ttatcagaagaatcagtgaaaggg 397 |||||||||||||||| ||||||| Sbjct: 59855 ttatcagaagaatcagagaaaggg 59878
>gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, complete sequence Length = 184007 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 139176 agagcagagcagagcagagg 139157
>gb|AC148314.3| Pan troglodytes BAC clone CH251-527C13 from chromosome 7, complete sequence Length = 172090 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 28198 agagcagagcagagcagagg 28179
>dbj|AK143296.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230037F05 product:zinc fingers and homeoboxes 3, full insert sequence Length = 4462 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ccgccgcctccgcggggcct 123 |||||||||||||||||||| Sbjct: 72 ccgccgcctccgcggggcct 91
>dbj|AK147447.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1043J08 product:baculoviral IAP repeat-containing 4, full insert sequence Length = 6678 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gggaagagcagagcagagcagagg 62 |||||||||||||||||| ||||| Sbjct: 196 gggaagagcagagcagaggagagg 173
>gb|AC102621.12| Mus musculus chromosome 1, clone RP23-429G8, complete sequence Length = 175286 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 131107 agagcagagcagagcagagg 131126
>emb|CR391268.1| Gallus gallus finished cDNA, clone ChEST204m10 Length = 819 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gagcagagcagagcagaggc 63 |||||||||||||||||||| Sbjct: 551 gagcagagcagagcagaggc 570
>gb|AC158382.2| Mus musculus BAC clone RP24-105N17 from chromosome 12, complete sequence Length = 166347 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 10310 agagcagagcagagcagagg 10329
>gb|AC149085.6| Mus musculus BAC clone RP23-191I16 from chromosome 7, complete sequence Length = 208232 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 28776 agagcagagcagagcagagg 28757
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcgccgtcgacgaagccgtc 322 |||||||||||||||||||| Sbjct: 850855 tcgccgtcgacgaagccgtc 850874
>dbj|AK038950.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230078D10 product:unclassifiable, full insert sequence Length = 3534 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ccgccgcctccgcggggcct 123 |||||||||||||||||||| Sbjct: 100 ccgccgcctccgcggggcct 119
>gb|AC007416.12|AC007416 Drosophila melanogaster, chromosome 2L, region 28B-28B, BAC clone BACR08I01, complete sequence Length = 169427 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaggggaagagcagagcagagcag 59 ||||||||||| |||||||||||| Sbjct: 137427 aaggggaagagaagagcagagcag 137450
>emb|BX005388.20| Zebrafish DNA sequence from clone DKEY-164M7, complete sequence Length = 220740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 aggggaagagcagagcagagcaga 60 |||||| ||||||||||||||||| Sbjct: 150680 aggggaggagcagagcagagcaga 150657
>gb|AC156552.10| Mus musculus chromosome 3, clone RP24-271K21, complete sequence Length = 168716 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 63791 agagcagagcagagcagagg 63772
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gcgccgctcccaccggcgcc 178 |||||||||||||||||||| Sbjct: 7715850 gcgccgctcccaccggcgcc 7715831
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggaagagcagagcagagcag 59 |||||||||||||||||||| Sbjct: 154911 ggaagagcagagcagagcag 154930
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgtccaagctccgccgcctc 113 |||||||||||||||||||| Sbjct: 1579449 cgtccaagctccgccgcctc 1579468 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cgtccaagctccgccgcctc 113 |||||||||||||||||||| Sbjct: 1141903 cgtccaagctccgccgcctc 1141884
>gb|AC133965.3| Homo sapiens BAC clone RP11-781F15 from 2, complete sequence Length = 48376 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gagcagagcagagcagaggc 63 |||||||||||||||||||| Sbjct: 45414 gagcagagcagagcagaggc 45395
>gb|AC068491.4| Homo sapiens BAC clone RP11-803D5 from 2, complete sequence Length = 176551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gagcagagcagagcagaggc 63 |||||||||||||||||||| Sbjct: 138643 gagcagagcagagcagaggc 138624
>gb|AC009725.12|AC009725 Mus musculus chromosome , clone CT7-388N17, complete sequence Length = 145152 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 ggggaagagcagagcagagcagag 61 |||| ||||||||||||||||||| Sbjct: 43851 ggggcagagcagagcagagcagag 43828
>gb|AC092379.4| Homo sapiens chromosome 16 clone RP11-707E24, complete sequence Length = 182300 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 66335 agagcagagcagagcagagg 66316
>gb|AC104326.20| Mus musculus strain C57BL/6J chromosome 2 clone rp23-20g17, complete sequence Length = 232241 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gaagagcagagcagagcaga 60 |||||||||||||||||||| Sbjct: 27067 gaagagcagagcagagcaga 27086
>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence Length = 203244 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 119188 agagcagagcagagcagagg 119169
>gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete sequence Length = 168863 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 111984 aagagcagagcagagcagag 112003
>gb|AC006433.18|AC006433 Homo sapiens, clone RP11-6A1, complete sequence Length = 179563 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 5085 agagcagagcagagcagagg 5066
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cgtccaagctccgccgcctc 113 |||||||||||||||||||| Sbjct: 118126 cgtccaagctccgccgcctc 118107
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 25529 aagagcagagcagagcagag 25510
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgtccaagctccgccgcctc 113 |||||||||||||||||||| Sbjct: 108173 cgtccaagctccgccgcctc 108192
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 84144 agagcagagcagagcagagg 84125
>dbj|AK120755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007B06, full insert sequence Length = 1927 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 111 agagcagagcagagcagagg 92
>dbj|AK119873.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-D07, full insert sequence Length = 2841 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcagtgcgctgctgcagcag 159 |||||||||||||||||||| Sbjct: 2614 gcagtgcgctgctgcagcag 2633
>gb|AF142416.1|AF142416 Mus musculus Lutheran glycoprotein gene, promoter region Length = 3428 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 2709 agagcagagcagagcagagg 2728
>dbj|AK110483.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-A10, full insert sequence Length = 3115 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cagtgcgctgctgcagcagc 160 |||||||||||||||||||| Sbjct: 1956 cagtgcgctgctgcagcagc 1975
>emb|BX530028.5| Mouse DNA sequence from clone RP23-207E14 on chromosome X, complete sequence Length = 71571 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gggaagagcagagcagagcagagg 62 |||||||||||||||||| ||||| Sbjct: 32899 gggaagagcagagcagaggagagg 32876
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaggggaagagcagagcagagcag 59 ||||||||||| |||||||||||| Sbjct: 263658 aaggggaagagaagagcagagcag 263681
>gb|AC093317.22| Mus musculus strain C57BL/6J chromosome 3 clone rp23-218k6, complete sequence Length = 214004 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 68069 agagcagagcagagcagagg 68050
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgccgtcgacgaagccgtc 322 |||||||||||||||||||| Sbjct: 2565681 tcgccgtcgacgaagccgtc 2565662 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcgccgtcgacgaagccgtc 322 |||||||||||||||||||| Sbjct: 1961725 tcgccgtcgacgaagccgtc 1961744
>emb|AL935303.7| Zebrafish DNA sequence from clone CH211-197A2, complete sequence Length = 185410 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 aggggaagagcagagcagagcaga 60 |||||| ||||||||||||||||| Sbjct: 141838 aggggaggagcagagcagagcaga 141815
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggaagagcagagcagagcag 59 |||||||||||||||||||| Sbjct: 154911 ggaagagcagagcagagcag 154930
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gcgccgctcccaccggcgcc 178 |||||||||||||||||||| Sbjct: 7715731 gcgccgctcccaccggcgcc 7715712
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggaagagcagagcagagcag 59 |||||||||||||||||||| Sbjct: 150082 ggaagagcagagcagagcag 150063
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gcgccgctcccaccggcgcc 178 |||||||||||||||||||| Sbjct: 103243 gcgccgctcccaccggcgcc 103224
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gcgccgctcccaccggcgcc 178 |||||||||||||||||||| Sbjct: 14841 gcgccgctcccaccggcgcc 14822
>emb|AL773565.17| Mouse DNA sequence from clone RP23-76A20 on chromosome X, complete sequence Length = 132915 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 84420 agagcagagcagagcagagg 84401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 84115 agagcagagcagagcagagg 84096
>gb|AC141438.4| Mus musculus BAC clone RP23-212C9 from 9, complete sequence Length = 195679 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 2663 aagagcagagcagagcagag 2682
>gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, complete sequence Length = 221553 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 176571 agagcagagcagagcagagg 176552
>gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complete sequence Length = 198162 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagagcagagcagagcagag 61 |||||||||||||||||||| Sbjct: 63762 aagagcagagcagagcagag 63781
>emb|CT025556.12| Mouse DNA sequence from clone RP24-91G8 on chromosome 13, complete sequence Length = 225239 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 85703 agagcagagcagagcagagg 85684
>emb|AL954388.5| Mouse DNA sequence from clone RP23-395P6 on chromosome 2, complete sequence Length = 131825 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 25842 agagcagagcagagcagagg 25861
>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete sequence Length = 243954 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 33 ggaaaggggaagagcagagcagagcaga 60 |||| |||| |||||||||||||||||| Sbjct: 50936 ggaagggggcagagcagagcagagcaga 50909
>emb|AL583885.17| Mouse DNA sequence from clone RP23-323K24 on chromosome 15, complete sequence Length = 136387 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 55557 agagcagagcagagcagagg 55576
>emb|AL772222.9| Mouse DNA sequence from clone RP23-242D18 on chromosome 4, complete sequence Length = 116090 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtcaaggagaggctccaa 220 |||||||||||||||||||| Sbjct: 5418 aggtcaaggagaggctccaa 5399
>emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete sequence Length = 207901 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ccgccgcctccgcggggcct 123 |||||||||||||||||||| Sbjct: 142814 ccgccgcctccgcggggcct 142795
>emb|AL845293.5| Mouse DNA sequence from clone RP23-328P7 on chromosome 2, complete sequence Length = 212001 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 aggtcaaggagaggctccaa 220 |||||||||||||||||||| Sbjct: 84254 aggtcaaggagaggctccaa 84273
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete sequence Length = 232587 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 179637 agagcagagcagagcagagg 179618
>emb|AL606756.17| Mouse DNA sequence from clone RP23-265O19 on chromosome 3, complete sequence Length = 193976 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agagcagagcagagcagagg 62 |||||||||||||||||||| Sbjct: 20234 agagcagagcagagcagagg 20215
>gb|AC090939.2| Homo sapiens chromosome 3 clone RP11-127I14 map 3p, complete sequence Length = 161366 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccgctcccaccggcgcctcc 181 |||||||||||||||||||| Sbjct: 65353 ccgctcccaccggcgcctcc 65372
>emb|AL645975.9| Mouse DNA sequence from clone RP23-154F12 on chromosome 11, complete sequence Length = 44496 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gggaagagcagagcagagca 58 |||||||||||||||||||| Sbjct: 8574 gggaagagcagagcagagca 8555 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,779,408 Number of Sequences: 3902068 Number of extensions: 3779408 Number of successful extensions: 91737 Number of sequences better than 10.0: 180 Number of HSP's better than 10.0 without gapping: 183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89409 Number of HSP's gapped (non-prelim): 2182 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
