ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet23b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468574.1| Oryza sativa (japonica cultivar-group), predic... 248 1e-62
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 145 2e-31
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
4gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31
5ref|NM_197076.1| Oryza sativa (japonica cultivar-group) unknown ... 70 7e-09
6dbj|AK070826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
8dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
9gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 gen... 54 4e-04
10dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
12dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
14emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb... 48 0.026
15gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
16ref|XM_475221.1| Oryza sativa (japonica cultivar-group), predic... 46 0.10
17gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
19gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.41
20gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.41
21emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.41
22gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosom... 42 1.6
23gb|M99443.1|CVNGROESLA Allochromatium vinosum GroES (groES) and ... 42 1.6
24gb|BC070686.1| Xenopus laevis hypothetical protein MGC83096, mRN... 42 1.6
25gb|AC140211.2| Mus musculus BAC clone RP24-474M1 from chromosome... 42 1.6
26gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 42 1.6
27emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.6
28gb|AC121257.6| Mus musculus chromosome 14, clone RP24-202E4, com... 42 1.6
29gb|AC153583.10| Mus musculus 6 BAC RP23-349K15 (Roswell Park Can... 42 1.6
30emb|AL354820.18| Human DNA sequence from clone RP11-550E22 on ch... 42 1.6
31emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
32gb|AE011683.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.6
33gb|AC105460.4| Homo sapiens BAC clone RP11-297P16 from 4, comple... 42 1.6
34dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.6
35emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chr... 42 1.6
36gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete... 40 6.4
37gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.4
38gb|BT016073.1| Drosophila melanogaster LP05312 full insert cDNA 40 6.4
39gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.4
40ref|XM_540198.2| PREDICTED: Canis familiaris similar to all-tran... 40 6.4
41gb|AC128663.4| Mus musculus BAC clone RP24-263E2 from chromosome... 40 6.4
42gb|AC121855.3| Mus musculus BAC clone RP24-97C18 from chromosome... 40 6.4
43gb|AE014307.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.4
44gb|AC121866.2| Mus musculus BAC clone RP24-114G1 from 8, complet... 40 6.4
45emb|AL358855.16| Human DNA sequence from clone RP11-317H7 on chr... 40 6.4
46emb|AJ311165.1|BJA311165 Bradyrhizobium japonicum hemN2 gene (pa... 40 6.4
47emb|AJ252085.1|DME252085 Drosophila melanogaster Imp-a1 gene for... 40 6.4
48emb|AL606488.15| Mouse DNA sequence from clone RP23-90E8 on chro... 40 6.4
49gb|AC104984.14| Homo sapiens chromosome 17, clone RP11-354P11, c... 40 6.4
50emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in ... 40 6.4
51gb|AC092500.2| Homo sapiens chromosome 3 clone RP11-111P21, comp... 40 6.4
52gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Pa... 40 6.4
53dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.4
54ref|NM_079443.1| Drosophila melanogaster karyopherin 1 CG8548-RA... 40 6.4
55gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome ... 40 6.4
56gb|AC131791.4| Mus musculus BAC clone RP24-462N24 from chromosom... 40 6.4
57gb|AC034187.6| Homo sapiens chromosome 3 clone RP11-202A21 map 3... 40 6.4
58gb|AF176315.2|AF176315 Homo sapiens chromosome 3 clone RP11-83M1... 40 6.4
59gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.4
60dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
61gb|AC022035.5|AC022035 Homo sapiens chromosome 18, clone RP11-10... 40 6.4
62gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopoly... 40 6.4
63gb|AC040896.9| Homo sapiens chromosome 18, clone RP11-734B5, com... 40 6.4
64gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
65dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
66dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.4
67dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.4
68gb|AE005109.1| Halobacterium sp. NRC-1 section 140 of 170 of the... 40 6.4
69ref|XM_311277.2| Anopheles gambiae str. PEST ENSANGP00000017531 ... 40 6.4
70dbj|AK099986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
71gb|AF117826.1|AF117826 Homo sapiens serotonin transporter protei... 40 6.4
72gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70... 40 6.4
73emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.4
74gb|AF074957.1|AF074957 Drosophila melanogaster karyopherin alpha... 40 6.4
75emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.4
76gb|AC118596.7| Mus musculus chromosome 1, clone RP24-199M24, com... 40 6.4
77emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro... 40 6.4
78emb|X76753.2|HSSTGEX1 Homo sapiens HG 5-HTT gene for serotonin t... 40 6.4
79gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p... 40 6.4 
>ref|XM_468574.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 933

 Score =  248 bits (125), Expect = 1e-62
 Identities = 155/165 (93%)
 Strand = Plus / Plus

                                                                       
Query: 148 cgccgccgcccatgtcctcctgcggccgatacatcctgcaccgcgtctgccgcttcgaca 207
           |||||||||||||||| ||||||||||| |||||||| |||||||||||| | |||||||
Sbjct: 137 cgccgccgcccatgtcgtcctgcggccgctacatcctccaccgcgtctgcaggttcgaca 196

                                                                       
Query: 208 cgctcgccggcgtcgccatcaagtacggcgtcgaggtggccgacgtgaagcgggtgaacg 267
           | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 197 ccctcgccggcgtcgccatcaagtacggcgtcgaggtggcggatgtgaagcgggtgaacg 256

                                                        
Query: 268 gcctcaccgccgacctgcagatgttcgcccacaagacgctgcgga 312
           |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 257 gcctcaccaccgacctccagatgttcgcccacaagacgctgcgga 301
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Plus

                                                                          
Query: 148    cgccgccgcccatgtcctcctgcggccgatacatcctgcaccgcgtctgccgcttcgaca 207
              |||||||||||||||| ||||||||||| |||||||| |||||||||||| | |||||||
Sbjct: 599764 cgccgccgcccatgtcgtcctgcggccgctacatcctccaccgcgtctgcaggttcgaca 599823

                                                   
Query: 208    cgctcgccggcgtcgccatcaagtacggcgtcgaggt 244
              | |||||||||||||||||||||||||||||||||||
Sbjct: 599824 ccctcgccggcgtcgccatcaagtacggcgtcgaggt 599860



 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                          
Query: 241    aggtggccgacgtgaagcgggtgaacggcctcaccgccgacctgcagatgttcgcccaca 300
              ||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 599960 aggtggcggatgtgaagcgggtgaacggcctcaccaccgacctccagatgttcgcccaca 600019

                          
Query: 301    agacgctgcgga 312
              ||||||||||||
Sbjct: 600020 agacgctgcgga 600031
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Plus

                                                                          
Query: 148    cgccgccgcccatgtcctcctgcggccgatacatcctgcaccgcgtctgccgcttcgaca 207
              |||||||||||||||| ||||||||||| |||||||| |||||||||||| | |||||||
Sbjct: 599762 cgccgccgcccatgtcgtcctgcggccgctacatcctccaccgcgtctgcaggttcgaca 599821

                                                   
Query: 208    cgctcgccggcgtcgccatcaagtacggcgtcgaggt 244
              | |||||||||||||||||||||||||||||||||||
Sbjct: 599822 ccctcgccggcgtcgccatcaagtacggcgtcgaggt 599858



 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                          
Query: 241    aggtggccgacgtgaagcgggtgaacggcctcaccgccgacctgcagatgttcgcccaca 300
              ||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 599958 aggtggcggatgtgaagcgggtgaacggcctcaccaccgacctccagatgttcgcccaca 600017

                          
Query: 301    agacgctgcgga 312
              ||||||||||||
Sbjct: 600018 agacgctgcgga 600029
to top
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0043C10, complete sequence
          Length = 108688

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Minus

                                                                         
Query: 148   cgccgccgcccatgtcctcctgcggccgatacatcctgcaccgcgtctgccgcttcgaca 207
             |||||||||||||||| ||||||||||| |||||||| |||||||||||| | |||||||
Sbjct: 16154 cgccgccgcccatgtcgtcctgcggccgctacatcctccaccgcgtctgcaggttcgaca 16095

                                                  
Query: 208   cgctcgccggcgtcgccatcaagtacggcgtcgaggt 244
             | |||||||||||||||||||||||||||||||||||
Sbjct: 16094 ccctcgccggcgtcgccatcaagtacggcgtcgaggt 16058



 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                         
Query: 241   aggtggccgacgtgaagcgggtgaacggcctcaccgccgacctgcagatgttcgcccaca 300
             ||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 15958 aggtggcggatgtgaagcgggtgaacggcctcaccaccgacctccagatgttcgcccaca 15899

                         
Query: 301   agacgctgcgga 312
             ||||||||||||
Sbjct: 15898 agacgctgcgga 15887
to top
>ref|NM_197076.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0029C15.5), mRNA
          Length = 1523

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 92/111 (82%)
 Strand = Plus / Plus

                                                                       
Query: 202 tcgacacgctcgccggcgtcgccatcaagtacggcgtcgaggtggccgacgtgaagcggg 261
           ||||||| ||||||||  |||| |||||||||||||||||||| || ||| | ||| || 
Sbjct: 224 tcgacaccctcgccgggatcgctatcaagtacggcgtcgaggtagcggacatcaagaggc 283

                                                              
Query: 262 tgaacggcctcaccgccgacctgcagatgttcgcccacaagacgctgcgga 312
           |||| |||||  |  | ||||| |||||||| || ||||||||||||||||
Sbjct: 284 tgaatggcctatcaactgacctccagatgtttgcgcacaagacgctgcgga 334
to top
>dbj|AK070826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064K14, full
           insert sequence
          Length = 1734

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 92/111 (82%)
 Strand = Plus / Plus

                                                                       
Query: 202 tcgacacgctcgccggcgtcgccatcaagtacggcgtcgaggtggccgacgtgaagcggg 261
           ||||||| ||||||||  |||| |||||||||||||||||||| || ||| | ||| || 
Sbjct: 435 tcgacaccctcgccgggatcgctatcaagtacggcgtcgaggtagcggacatcaagaggc 494

                                                              
Query: 262 tgaacggcctcaccgccgacctgcagatgttcgcccacaagacgctgcgga 312
           |||| |||||  |  | ||||| |||||||| || ||||||||||||||||
Sbjct: 495 tgaatggcctatcaactgacctccagatgtttgcgcacaagacgctgcgga 545
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 204      gacacgctcgccggcgtcgccatcaagtacggcgtcgagg 243
                ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 30589763 gacacgctccccggcctcgccatcaagtacggcgtcgagg 30589802
to top
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0069C14
          Length = 150579

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 204   gacacgctcgccggcgtcgccatcaagtacggcgtcgagg 243
             ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 88326 gacacgctccccggcctcgccatcaagtacggcgtcgagg 88365
to top
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete
             sequence
          Length = 148816

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 202   tcgacacgctcgccggcgtcgccatcaagtacggcgtcgaggt 244
             ||||||| ||||||||  |||| ||||||||||||||||||||
Sbjct: 89448 tcgacaccctcgccgggatcgctatcaagtacggcgtcgaggt 89406



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 279   gacctgcagatgttcgcccacaagacgctgcgga 312
             ||||| |||||||| || ||||||||||||||||
Sbjct: 89170 gacctccagatgtttgcgcacaagacgctgcgga 89137
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 202      tcgacacgctcgccggcgtcgccatcaagtacggcgtcgaggt 244
                ||||||| ||||||||  |||| ||||||||||||||||||||
Sbjct: 17842593 tcgacaccctcgccgggatcgctatcaagtacggcgtcgaggt 17842635



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 279      gacctgcagatgttcgcccacaagacgctgcgga 312
                ||||| |||||||| || ||||||||||||||||
Sbjct: 17842871 gacctccagatgtttgcgcacaagacgctgcgga 17842904
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 202      tcgacacgctcgccggcgtcgccatcaagtacggcgtcgaggt 244
                ||||||| ||||||||  |||| ||||||||||||||||||||
Sbjct: 17851846 tcgacaccctcgccgggatcgctatcaagtacggcgtcgaggt 17851888



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 279      gacctgcagatgttcgcccacaagacgctgcgga 312
                ||||| |||||||| || ||||||||||||||||
Sbjct: 17852124 gacctccagatgtttgcgcacaagacgctgcgga 17852157
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 140      gtcgcccacgccgccgcccatgtc 163
                ||||||||||||||||||||||||
Sbjct: 22755616 gtcgcccacgccgccgcccatgtc 22755639



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 211      tcgccggcgtcgccatcaagtacggcgtcgag 242
                ||||||||||||||||  | ||||||||||||
Sbjct: 24072679 tcgccggcgtcgccatgtactacggcgtcgag 24072710
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 140      gtcgcccacgccgccgcccatgtc 163
                ||||||||||||||||||||||||
Sbjct: 22683807 gtcgcccacgccgccgcccatgtc 22683830



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 211      tcgccggcgtcgccatcaagtacggcgtcgag 242
                ||||||||||||||||  | ||||||||||||
Sbjct: 24000885 tcgccggcgtcgccatgtactacggcgtcgag 24000916
to top
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131603

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 140   gtcgcccacgccgccgcccatgtc 163
             ||||||||||||||||||||||||
Sbjct: 67466 gtcgcccacgccgccgcccatgtc 67489
to top
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10,
             complete sequence
          Length = 150825

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 141   tcgcccacgccgccgcccatgtc 163
             |||||||||||||||||||||||
Sbjct: 84518 tcgcccacgccgccgcccatgtc 84540
to top
>ref|XM_475221.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1011

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 141 tcgcccacgccgccgcccatgtc 163
           |||||||||||||||||||||||
Sbjct: 26  tcgcccacgccgccgcccatgtc 48
to top
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0014K18, complete sequence
          Length = 123508

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 141  tcgcccacgccgccgcccatgtc 163
            |||||||||||||||||||||||
Sbjct: 9068 tcgcccacgccgccgcccatgtc 9090
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 141      tcgcccacgccgccgcccatgtc 163
                |||||||||||||||||||||||
Sbjct: 19756444 tcgcccacgccgccgcccatgtc 19756466
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 202     tcgacacgctcgccggcgtcgc 223
               ||||||||||||||||||||||
Sbjct: 1914086 tcgacacgctcgccggcgtcgc 1914065
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 202     tcgacacgctcgccggcgtcgc 223
               ||||||||||||||||||||||
Sbjct: 1515814 tcgacacgctcgccggcgtcgc 1515835
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 202     tcgacacgctcgccggcgtcgc 223
               ||||||||||||||||||||||
Sbjct: 1402902 tcgacacgctcgccggcgtcgc 1402923
to top
>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete sequence
          Length = 210984

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 33     ccctttccacccttcccctttcccc 57
              ||||||||||| |||||||||||||
Sbjct: 195037 ccctttccacctttcccctttcccc 195013
to top
>gb|M99443.1|CVNGROESLA Allochromatium vinosum GroES (groES) and GroEL (groEL) genes,
            complete cds
          Length = 2253

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 134  gcccatgtcgcccacgccgccgccc 158
            |||||||||||||| ||||||||||
Sbjct: 2112 gcccatgtcgcccatgccgccgccc 2088
to top
>gb|BC070686.1| Xenopus laevis hypothetical protein MGC83096, mRNA (cDNA clone
           MGC:83096 IMAGE:6317393), complete cds
          Length = 982

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 33  ccctttccacccttccccttt 53
           |||||||||||||||||||||
Sbjct: 104 ccctttccacccttccccttt 84
to top
>gb|AC140211.2| Mus musculus BAC clone RP24-474M1 from chromosome 14, complete sequence
          Length = 159577

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 33     ccctttccacccttcccctttcccc 57
              ||||||||||| |||||||||||||
Sbjct: 155003 ccctttccacctttcccctttcccc 155027
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 197     ccgcttcgacacgctcgccgg 217
               |||||||||||||||||||||
Sbjct: 4539572 ccgcttcgacacgctcgccgg 4539552
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    tcgcccacgccgccgcccatg 161
              |||||||||||||||||||||
Sbjct: 676376 tcgcccacgccgccgcccatg 676356
to top
>gb|AC121257.6| Mus musculus chromosome 14, clone RP24-202E4, complete sequence
          Length = 188883

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 33    ccctttccacccttcccctttcccc 57
             ||||||||||| |||||||||||||
Sbjct: 49915 ccctttccacctttcccctttcccc 49939
to top
>gb|AC153583.10| Mus musculus 6 BAC RP23-349K15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196821

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    cccctttccacccttcccctt 52
             |||||||||||||||||||||
Sbjct: 83473 cccctttccacccttcccctt 83453
to top
>emb|AL354820.18| Human DNA sequence from clone RP11-550E22 on chromosome 13 Contains
             part of a novel gene, the 5' end of the DDX26 gene for
             DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (HDB,
             DBI-1, DICE1, NOTCHL2,Notchl2, DKFZP434B105), part of a
             novel gene, a ribosomal protein S4, X-linked (RPS4X)
             pseudogene, a small nuclear ribonucleoprotein polypeptide
             G pseudogene and a CpG island, complete sequence
          Length = 165987

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 25    cgccctccccctttccacccttccc 49
             |||||||||||||||| ||||||||
Sbjct: 41477 cgccctccccctttcctcccttccc 41453
to top
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   acgctcgccggcgtcgccatc 227
             |||||||||||||||||||||
Sbjct: 55722 acgctcgccggcgtcgccatc 55702
to top
>gb|AE011683.1| Xanthomonas axonopodis pv. citri str. 306,  section 61 of 469 of the
            complete genome
          Length = 11877

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 141  tcgcccacgccgccgcccatg 161
            |||||||||||||||||||||
Sbjct: 8864 tcgcccacgccgccgcccatg 8844
to top
>gb|AC105460.4| Homo sapiens BAC clone RP11-297P16 from 4, complete sequence
          Length = 185755

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 27    ccctccccctttccacccttcccct 51
             |||||||||||||| ||||||||||
Sbjct: 33126 ccctccccctttcctcccttcccct 33150
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 89      cgtcctcgccggcgaccgctg 109
               |||||||||||||||||||||
Sbjct: 2789614 cgtcctcgccggcgaccgctg 2789634
to top
>emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chromosome 2, complete
              sequence
          Length = 183980

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 29     ctccccctttccacccttcccctttcccc 57
              |||||||||||| | ||||||||||||||
Sbjct: 123788 ctccccctttcccctcttcccctttcccc 123760
to top
>gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete sequence
          Length = 167163

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   aaaaatgccgccttggactc 418
             ||||||||||||||||||||
Sbjct: 77697 aaaaatgccgccttggactc 77678
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    tcgccatcaagtacggcgtc 239
              ||||||||||||||||||||
Sbjct: 517007 tcgccatcaagtacggcgtc 516988
to top
>gb|BT016073.1| Drosophila melanogaster LP05312 full insert cDNA
          Length = 2327

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 aaaaatgccgccttggactc 418
           ||||||||||||||||||||
Sbjct: 128 aaaaatgccgccttggactc 147
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    catgtcgcccacgccgccgcccat 160
              ||||| ||||||||||||||||||
Sbjct: 295100 catgttgcccacgccgccgcccat 295123
to top
>ref|XM_540198.2| PREDICTED: Canis familiaris similar to
          all-trans-13,14-dihydroretinol saturase (LOC483083),
          mRNA
          Length = 2266

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 43 ccttcccctttccccgccgggaag 66
          |||||||||| |||||||||||||
Sbjct: 6  ccttccccttgccccgccgggaag 29
to top
>gb|AC128663.4| Mus musculus BAC clone RP24-263E2 from chromosome 8, complete sequence
          Length = 197679

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 29    ctccccctttccacccttcccctttccc 56
             |||||||| ||| |||||||||||||||
Sbjct: 58817 ctccccctctccgcccttcccctttccc 58844
to top
>gb|AC121855.3| Mus musculus BAC clone RP24-97C18 from chromosome 6, complete sequence
          Length = 192062

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 26     gccctccccctttccacccttcccctttcccc 57
              ||||| |||| ||||||| |||||||||||||
Sbjct: 107805 gcccttcccccttccacctttcccctttcccc 107774
to top
>gb|AE014307.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 4
             of 11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ccccctttccacccttcccc 50
             ||||||||||||||||||||
Sbjct: 64074 ccccctttccacccttcccc 64093
to top
>gb|AC121866.2| Mus musculus BAC clone RP24-114G1 from 8, complete sequence
          Length = 162835

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 29    ctccccctttccacccttcccctttccc 56
             |||||||| ||| |||||||||||||||
Sbjct: 12715 ctccccctctccgcccttcccctttccc 12688
to top
>emb|AL358855.16| Human DNA sequence from clone RP11-317H7 on chromosome 13, complete
              sequence
          Length = 156075

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     ccccctttccacccttcccc 50
              ||||||||||||||||||||
Sbjct: 114757 ccccctttccacccttcccc 114776
to top
>emb|AJ311165.1|BJA311165 Bradyrhizobium japonicum hemN2 gene (partial), ORF236, ORF403,
            ORF319, ORF206, ORF560, hmuV gene, hmuU gene, hmuT gene,
            hmuT gene, hmuR gene, ORF110, ORF167, exbB gene, exbD
            gene, tonB gene and ORF69 (partial)
          Length = 16607

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  gctcgccggcgtcgccatca 228
            ||||||||||||||||||||
Sbjct: 8922 gctcgccggcgtcgccatca 8903
to top
>emb|AJ252085.1|DME252085 Drosophila melanogaster Imp-a1 gene for Importin-alpha1, exons 1-6
          Length = 3480

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 aaaaatgccgccttggactc 418
           ||||||||||||||||||||
Sbjct: 868 aaaaatgccgccttggactc 887
to top
>emb|AL606488.15| Mouse DNA sequence from clone RP23-90E8 on chromosome 13 Contains part
             of a novel gene, complete sequence
          Length = 188423

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 30    tccccctttccacccttcccctttcccc 57
             ||||||||||| || |||||||||||||
Sbjct: 63263 tccccctttccccctttcccctttcccc 63236
to top
>gb|AC104984.14| Homo sapiens chromosome 17, clone RP11-354P11, complete sequence
          Length = 175136

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   ggcgcccaccgctggggcgc 130
             ||||||||||||||||||||
Sbjct: 28103 ggcgcccaccgctggggcgc 28084
to top
>emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in linkage group 21,
             complete sequence
          Length = 200625

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   gccatgcccatgtcgcccac 148
             ||||||||||||||||||||
Sbjct: 35243 gccatgcccatgtcgcccac 35224
to top
>gb|AC092500.2| Homo sapiens chromosome 3 clone RP11-111P21, complete sequence
          Length = 182569

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ccccctttccacccttcccc 50
             ||||||||||||||||||||
Sbjct: 81680 ccccctttccacccttcccc 81661
to top
>gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Park Cancer Institute
              Human PAC Library) complete sequence
          Length = 223542

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     ccccctttccacccttcccc 50
              ||||||||||||||||||||
Sbjct: 201627 ccccctttccacccttcccc 201646
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     cgcccacgccgccgcccatg 161
               ||||||||||||||||||||
Sbjct: 1024255 cgcccacgccgccgcccatg 1024236
to top
>ref|NM_079443.1| Drosophila melanogaster karyopherin 1 CG8548-RA (Kap-alpha1), mRNA
          Length = 2307

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 aaaaatgccgccttggactc 418
           ||||||||||||||||||||
Sbjct: 125 aaaaatgccgccttggactc 144
to top
>gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome 7, complete sequence
          Length = 242359

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 30    tccccctttccacccttcccctttcccc 57
             |||||||||||  |||||||||||||||
Sbjct: 29926 tccccctttccctccttcccctttcccc 29953
to top
>gb|AC131791.4| Mus musculus BAC clone RP24-462N24 from chromosome 7, complete sequence
          Length = 178072

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 30    tccccctttccacccttcccctttcccc 57
             |||||||||||  |||||||||||||||
Sbjct: 46566 tccccctttccctccttcccctttcccc 46593
to top
>gb|AC034187.6| Homo sapiens chromosome 3 clone RP11-202A21 map 3p, complete sequence
          Length = 171716

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ctttccacccttcccctttc 54
             ||||||||||||||||||||
Sbjct: 58232 ctttccacccttcccctttc 58251
to top
>gb|AF176315.2|AF176315 Homo sapiens chromosome 3 clone RP11-83M12 map 3p, complete sequence
          Length = 170755

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     ctttccacccttcccctttc 54
              ||||||||||||||||||||
Sbjct: 147023 ctttccacccttcccctttc 147042
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 206     cacgctcgccggcgtcgccatcaa 229
               |||||||||||||||| |||||||
Sbjct: 4394661 cacgctcgccggcgtcaccatcaa 4394684
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 208      cgctcgccggcgtcgccatc 227
                ||||||||||||||||||||
Sbjct: 21409758 cgctcgccggcgtcgccatc 21409739
to top
>gb|AC022035.5|AC022035 Homo sapiens chromosome 18, clone RP11-106E15, complete sequence
          Length = 175424

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     cctttccacccttccccttt 53
              ||||||||||||||||||||
Sbjct: 117015 cctttccacccttccccttt 116996
to top
>gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopolyhedrovirus, complete genome
          Length = 131995

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ccatgtcgcccacgccgccg 155
              ||||||||||||||||||||
Sbjct: 103281 ccatgtcgcccacgccgccg 103300
to top
>gb|AC040896.9| Homo sapiens chromosome 18, clone RP11-734B5, complete sequence
          Length = 189308

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     cctttccacccttccccttt 53
              ||||||||||||||||||||
Sbjct: 180480 cctttccacccttccccttt 180499
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 208     cgctcgccggcgtcgccatc 227
               ||||||||||||||||||||
Sbjct: 2017278 cgctcgccggcgtcgccatc 2017259
to top
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1210_A07
          Length = 131394

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   cgctcgccggcgtcgccatc 227
             ||||||||||||||||||||
Sbjct: 26863 cgctcgccggcgtcgccatc 26844
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     gctcgccggcgtcgccatca 228
               ||||||||||||||||||||
Sbjct: 7795357 gctcgccggcgtcgccatca 7795376
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 242     ggtggccgacgtgaagcggg 261
               ||||||||||||||||||||
Sbjct: 2943333 ggtggccgacgtgaagcggg 2943314
to top
>gb|AE005109.1| Halobacterium sp. NRC-1 section 140 of 170 of the complete genome
          Length = 12026

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 134 gcccatgtcgcccacgccgccgcccatg 161
           ||||||| |||||| |||||||||||||
Sbjct: 205 gcccatgccgcccatgccgccgcccatg 232
to top
>ref|XM_311277.2| Anopheles gambiae str. PEST ENSANGP00000017531 (ENSANGG00000015042),
            partial mRNA
          Length = 4488

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  cgctcgccggcgtcgccatc 227
            ||||||||||||||||||||
Sbjct: 1847 cgctcgccggcgtcgccatc 1866
to top
>dbj|AK099986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130A09, full
            insert sequence
          Length = 1964

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 211  tcgccggcgtcgccatcaagtacggcgtcgag 242
            ||||||||||||||||  | ||||||||||||
Sbjct: 1423 tcgccggcgtcgccatgtactacggcgtcgag 1454
to top
>gb|AF117826.1|AF117826 Homo sapiens serotonin transporter protein (SLC6A4) gene, promoter
            and exon 1A
          Length = 2040

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  ggcgcccaccgctggggcgc 130
            ||||||||||||||||||||
Sbjct: 2034 ggcgcccaccgctggggcgc 2015
to top
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete
             sequence
          Length = 234263

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   aaaaatgccgccttggactc 418
             ||||||||||||||||||||
Sbjct: 14294 aaaaatgccgccttggactc 14313
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 134    gcccatgtcgcccacgccgccgcccatg 161
              ||||||| |||||| |||||||||||||
Sbjct: 496845 gcccatgccgcccatgccgccgcccatg 496818



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 134    gcccatgtcgcccacgccgccgcccatg 161
              ||||||| |||||| |||||||||||||
Sbjct: 291186 gcccatgccgcccatgccgccgcccatg 291159
to top
>gb|AF074957.1|AF074957 Drosophila melanogaster karyopherin alpha 1 mRNA, partial cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 aaaaatgccgccttggactc 418
           ||||||||||||||||||||
Sbjct: 28  aaaaatgccgccttggactc 47
to top
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 176388

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 211   tcgccggcgtcgccatcaagtacggcgtcgag 242
             ||||||||||||||||  | ||||||||||||
Sbjct: 14717 tcgccggcgtcgccatgtactacggcgtcgag 14686
to top
>gb|AC118596.7| Mus musculus chromosome 1, clone RP24-199M24, complete sequence
          Length = 149611

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 30    tccccctttccacccttcccctttcccc 57
             ||||||||||| ||||||||||||||||
Sbjct: 45929 tccccctttcc-cccttcccctttcccc 45955
to top
>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 30     tccccctttccacccttcccctttcccc 57
              ||||||||||| || |||||||||||||
Sbjct: 153952 tccccctttccccctttcccctttcccc 153979
to top
>emb|X76753.2|HSSTGEX1 Homo sapiens HG 5-HTT gene for serotonin transporter, exon 1
          Length = 3695

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  ggcgcccaccgctggggcgc 130
            ||||||||||||||||||||
Sbjct: 3689 ggcgcccaccgctggggcgc 3670
to top
>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence
          Length = 169005

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 30     tccccctttccacccttcccctttcccc 57
              |||||||||||||  |||||||||||||
Sbjct: 155357 tccccctttccacttttcccctttcccc 155384


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,292,982
Number of Sequences: 3902068
Number of extensions: 2292982
Number of successful extensions: 56297
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 54013
Number of HSP's gapped (non-prelim): 2283
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top