ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet22h04 |
|---|---|
| Clone Library Name | barley_pub |
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 172 bits (437), Expect = 3e-43 Identities = 86/93 (92%), Positives = 91/93 (97%), Gaps = 1/93 (1%) Frame = +1 Query: 193 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 369 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 370 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIP 468 ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+P Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVP 125
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 169 bits (428), Expect = 3e-42 Identities = 82/85 (96%), Positives = 85/85 (100%) Frame = +1 Query: 214 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIV 393 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIGPL+V Sbjct: 52 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVV 111 Query: 394 DALRPVTDLPLDVHLMIVEPEQRIP 468 DALRPVTDLPLDVHLMIVEPEQR+P Sbjct: 112 DALRPVTDLPLDVHLMIVEPEQRVP 136
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 164 bits (415), Expect = 1e-40 Identities = 77/86 (89%), Positives = 85/86 (98%) Frame = +1 Query: 211 ASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLI 390 +SRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPL+ Sbjct: 46 SSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLV 105 Query: 391 VDALRPVTDLPLDVHLMIVEPEQRIP 468 VD+LRP+TDLPLDVHLMIVEP+QR+P Sbjct: 106 VDSLRPITDLPLDVHLMIVEPDQRVP 131
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 121 bits (303), Expect = 1e-27 Identities = 56/75 (74%), Positives = 69/75 (92%) Frame = +1 Query: 241 DIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDL 420 +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPLIVDA+RP+T Sbjct: 3 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 62 Query: 421 PLDVHLMIVEPEQRI 465 LDVHLMIVEPE+ + Sbjct: 63 TLDVHLMIVEPEKYV 77
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 113 bits (283), Expect = 2e-25 Identities = 55/75 (73%), Positives = 64/75 (85%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I V+PSILSA+FA LG ++K VE G D IH+DVMDG FVPNITIGPLIV+A+RPVTDLP Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61 Query: 424 LDVHLMIVEPEQRIP 468 LDVHLMI EP++ IP Sbjct: 62 LDVHLMIEEPDRYIP 76
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 94.4 bits (233), Expect = 1e-19 Identities = 42/79 (53%), Positives = 60/79 (75%) Frame = +1 Query: 232 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 411 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +VPN+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPL 71 Query: 412 TDLPLDVHLMIVEPEQRIP 468 +P+DVHLM+ + IP Sbjct: 72 VSIPIDVHLMVEPVDALIP 90
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 91.3 bits (225), Expect = 1e-18 Identities = 41/79 (51%), Positives = 59/79 (74%) Frame = +1 Query: 232 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 411 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +V N+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPL 71 Query: 412 TDLPLDVHLMIVEPEQRIP 468 +P+DVHLM+ + IP Sbjct: 72 VSIPIDVHLMVEPVDALIP 90
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 87.8 bits (216), Expect = 1e-17 Identities = 40/74 (54%), Positives = 57/74 (77%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 427 DVHLMIVEPEQRIP 468 D HLMI P++ P Sbjct: 67 DCHLMIDNPDRWAP 80
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 87.8 bits (216), Expect = 1e-17 Identities = 40/74 (54%), Positives = 57/74 (77%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 427 DVHLMIVEPEQRIP 468 D HLMI P++ P Sbjct: 67 DCHLMIDNPDRWAP 80
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 87.8 bits (216), Expect = 1e-17 Identities = 41/73 (56%), Positives = 55/73 (75%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G +V++L TD PLD Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLD 62 Query: 430 VHLMIVEPEQRIP 468 HLMI P++ P Sbjct: 63 CHLMIEAPDRWAP 75
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 83.6 bits (205), Expect = 2e-16 Identities = 38/67 (56%), Positives = 48/67 (71%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTV 66 Query: 424 LDVHLMI 444 +DVHLMI Sbjct: 67 MDVHLMI 73
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 82.0 bits (201), Expect = 7e-16 Identities = 38/74 (51%), Positives = 55/74 (74%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+A+FA+L ++ A VA DW+HVDVMDG FVPN+TIG +V +L +D+P+ Sbjct: 4 LIAPSILAADFARLTDE--AAVVASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPM 61 Query: 427 DVHLMIVEPEQRIP 468 D HLMI P++ P Sbjct: 62 DCHLMIDNPDRWAP 75
>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 233 Score = 80.1 bits (196), Expect = 3e-15 Identities = 37/79 (46%), Positives = 53/79 (67%) Frame = +1 Query: 217 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVD 396 R + K ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG FVPNIT GP +V Sbjct: 2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVA 61 Query: 397 ALRPVTDLPLDVHLMIVEP 453 A+ T+L L+VH MI P Sbjct: 62 AINRSTELFLEVHAMIYTP 80
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 79.7 bits (195), Expect = 3e-15 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 426 ++ SILSA+FA+LGE K AG DWIH DVMD +VPN+T+GP+I+ ALR +P+ Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPI 65 Query: 427 DVHLMIVEPEQRIP 468 DVHLM+ + IP Sbjct: 66 DVHLMVKPVDNLIP 79
>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 79.0 bits (193), Expect = 6e-15 Identities = 36/73 (49%), Positives = 50/73 (68%) Frame = +1 Query: 235 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 414 + ++V PSI+ A+ LG + K +E AG D+IH+D+MDG FVPN+T GP I+ A+ T Sbjct: 4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRST 63 Query: 415 DLPLDVHLMIVEP 453 DL L+VH MI P Sbjct: 64 DLFLEVHAMIYNP 76
>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 78.2 bits (191), Expect = 1e-14 Identities = 36/73 (49%), Positives = 51/73 (69%) Frame = +1 Query: 235 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 414 K ++++PSI+ A+ A LG+ + +E +G + IH+DVMDG FVPNIT GP I+ A+ T Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRST 62 Query: 415 DLPLDVHLMIVEP 453 DL L+VH MI P Sbjct: 63 DLFLEVHAMIYTP 75
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 78.2 bits (191), Expect = 1e-14 Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 426 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+I+++LR P+ Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65 Query: 427 DVHLMIVEPEQRIP 468 DVHLM+ + IP Sbjct: 66 DVHLMVKPVDNLIP 79
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 77.4 bits (189), Expect = 2e-14 Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE V AG D +H DVMD +VPN+TIGP++ +ALR P Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIP 468 +DVHLM+ ++ +P Sbjct: 65 IDVHLMVKPVDRIVP 79
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 75.9 bits (185), Expect = 5e-14 Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIP 468 +DVHLM+ ++ +P Sbjct: 65 IDVHLMVKPVDRIVP 79
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 75.9 bits (185), Expect = 5e-14 Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIP 468 +DVHLM+ ++ +P Sbjct: 65 IDVHLMVKPVDRIVP 79
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 75.9 bits (185), Expect = 5e-14 Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIP 468 +DVHLM+ ++ +P Sbjct: 65 IDVHLMVKPVDRIVP 79
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 75.9 bits (185), Expect = 5e-14 Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIP 468 +DVHLM+ ++ +P Sbjct: 65 IDVHLMVKPVDRIVP 79
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 75.5 bits (184), Expect = 6e-14 Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 3/75 (4%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALR---PVTDL 420 ++PS+L+ +FA L ++V + G DW+HVDVMD +FVPN+TIGP++V A+R + Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEA 65 Query: 421 PLDVHLMIVEPEQRI 465 D HLM++EPE+ I Sbjct: 66 FFDCHLMVIEPERYI 80
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 218 Score = 75.5 bits (184), Expect = 6e-14 Identities = 34/72 (47%), Positives = 47/72 (65%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G ++ LR T LP D Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFD 66 Query: 430 VHLMIVEPEQRI 465 VHLM+ P I Sbjct: 67 VHLMVSRPADLI 78
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 73.9 bits (180), Expect = 2e-13 Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP + ALR P Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAP 64 Query: 424 LDVHLMIVEPEQRIP 468 +DVHLM+ ++ IP Sbjct: 65 IDVHLMVKPVDRIIP 79
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 73.6 bits (179), Expect = 2e-13 Identities = 35/74 (47%), Positives = 50/74 (67%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+ ++ +GEQ++A G D +H DVMDG FVPNIT G I+ +R LP+ Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPI 62 Query: 427 DVHLMIVEPEQRIP 468 D HLMI P++ IP Sbjct: 63 DAHLMIENPDKYIP 76
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 73.6 bits (179), Expect = 2e-13 Identities = 31/72 (43%), Positives = 47/72 (65%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG ++ +LR T LD Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68 Query: 430 VHLMIVEPEQRI 465 HLM+ P + Sbjct: 69 CHLMVTNPSDYV 80
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 72.8 bits (177), Expect = 4e-13 Identities = 34/67 (50%), Positives = 49/67 (73%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I + SILSA+F L E++K E AG D+ HVD+MDG FVPNI++G I ++ +T+LP Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP 61 Query: 424 LDVHLMI 444 ++VHLM+ Sbjct: 62 VEVHLMV 68
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 72.8 bits (177), Expect = 4e-13 Identities = 32/65 (49%), Positives = 53/65 (81%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP+I++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLD 60 Query: 430 VHLMI 444 VHLM+ Sbjct: 61 VHLMV 65
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 72.4 bits (176), Expect = 5e-13 Identities = 31/65 (47%), Positives = 53/65 (81%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP++++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLD 60 Query: 430 VHLMI 444 VHLM+ Sbjct: 61 VHLMV 65
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 71.6 bits (174), Expect = 9e-13 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 11/82 (13%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV----- 411 I++PSIL+++FA L V AG +W+H+DVMDG FVPNIT+GP IV +LR Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVG 64 Query: 412 ---TDLP---LDVHLMIVEPEQ 459 +D P D H+M+ EPE+ Sbjct: 65 DKESDKPKAFFDCHMMVAEPEK 86
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 71.2 bits (173), Expect = 1e-12 Identities = 34/66 (51%), Positives = 46/66 (69%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPL+ ALRP T LP Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLP 64 Query: 424 LDVHLM 441 +DVHLM Sbjct: 65 IDVHLM 70
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 71.2 bits (173), Expect = 1e-12 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 13/84 (15%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 423 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G IV +LR P Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 Query: 424 ------------LDVHLMIVEPEQ 459 D H+M+ PE+ Sbjct: 65 DASNTEKKPTAFFDCHMMVENPEK 88
>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 67.0 bits (162), Expect = 2e-11 Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 3/68 (4%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV---TD 417 ++S S+LSANF++LGE + V +G D IH DVMD +V N+T GP+++++LR V Sbjct: 5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKS 64 Query: 418 LPLDVHLM 441 + +DVHLM Sbjct: 65 MVIDVHLM 72
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 67.0 bits (162), Expect = 2e-11 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 16/87 (18%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 423 I++PSIL+++FA LG + V +G +W+H+DVMDG FVPNIT+G IV +LR Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQ 64 Query: 424 ---------------LDVHLMIVEPEQ 459 D H+M+ EPE+ Sbjct: 65 EEEKASGEVARPTAFFDCHMMVEEPEK 91
>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)| Length = 231 Score = 66.6 bits (161), Expect = 3e-11 Identities = 27/72 (37%), Positives = 46/72 (63%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 +SPS++ + K EQ++ ++ + D+ H+D+MDG FVPN+T+ P V ++ + PLD Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLD 61 Query: 430 VHLMIVEPEQRI 465 HLM+ P+ I Sbjct: 62 CHLMVTRPQDYI 73
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 65.9 bits (159), Expect = 5e-11 Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 423 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 424 LDVHLMIVEPEQ 459 D+H+M+ +PEQ Sbjct: 67 FDMHMMVSKPEQ 78
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 65.9 bits (159), Expect = 5e-11 Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 423 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 424 LDVHLMIVEPEQ 459 D+H+M+ +PEQ Sbjct: 67 FDMHMMVSKPEQ 78
>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-epimerase) Length = 228 Score = 65.5 bits (158), Expect = 7e-11 Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 423 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 424 LDVHLMIVEPEQ 459 D+H+M+ PEQ Sbjct: 67 FDMHMMVSRPEQ 78
>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 217 Score = 52.4 bits (124), Expect = 6e-07 Identities = 28/65 (43%), Positives = 38/65 (58%) Frame = +1 Query: 259 SILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHL 438 SIL NF L E++ ++ G IH+DVMD FV NIT GP I++ + D DVH+ Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHM 71 Query: 439 MIVEP 453 M+ P Sbjct: 72 MVESP 76
>SGCE_ECOLI (P39362) Protein sgcE (EC 5.1.3.-)| Length = 210 Score = 48.5 bits (114), Expect = 8e-06 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 +I+ PS+ SAN G ++ A++ +H+D+ D F+ NIT G V A+ T P Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60 Query: 424 LDVHLMIVEPEQ 459 L H M+ P++ Sbjct: 61 LSFHFMLARPQR 72
>HIS4_RHORT (Q2RNA6) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 292 EQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDV 432 +Q A +AGC WIHV ++G F P V+A+ DLP+ + Sbjct: 34 DQAAAFALAGCRWIHVVDLNGAFAGRPVNAP-AVEAILAAVDLPVQL 79
>RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 211 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 348 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 211 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 348 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>LEU12_METAC (Q8THA5) 2-isopropylmalate synthase 2 (EC 2.3.3.13)| (Alpha-isopropylmalate synthase 2) (Alpha-IPM synthetase 2) Length = 515 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = +1 Query: 280 AKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVH 435 A L E KAV+ AGCD I+V G VP+ + I D +T +P+DVH Sbjct: 160 AYLIEVFKAVQEAGCDIINVPDTVGVMVPS-AMYRQIKDIAAEIT-IPIDVH 209
>HIS4_RHOS4 (P50936) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 239 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +1 Query: 295 QVKAVEVAGCDWIHVDVMDGRF 360 Q A E AGC+W+H+ ++G F Sbjct: 35 QAAAFEAAGCEWVHLVDLNGAF 56
>NU4M_HIPAM (Q9ZZY2) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 459 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -2 Query: 417 ISHWTQSINN*WSNCDIWHKAPIHDINMNPVTSCHL 310 + +WTQ+++N WSN +W + + P+ HL Sbjct: 179 LQYWTQAVSNSWSNVFLWLACMMAFMVKMPLYGLHL 214 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,030,523 Number of Sequences: 219361 Number of extensions: 947142 Number of successful extensions: 3062 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 2985 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3041 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
