ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet22f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1... 484 e-133
2ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA 161 2e-36
3ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA 161 2e-36
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 161 2e-36
5gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic ... 161 2e-36
6emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) ia... 161 2e-36
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
8emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative ... 161 2e-36
9dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
10dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.086
12gb|AF083344.2|AF083344 Triticum aestivum heat shock protein 101 ... 46 0.086
13dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.086
14gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, com... 46 0.086
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.086
16emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb... 46 0.086
17ref|NM_153786.1| Mus musculus vestigial like 2 homolog (Drosophi... 44 0.34
18ref|XM_419164.1| PREDICTED: Gallus gallus similar to calcium-bin... 44 0.34
19ref|XM_545380.1| PREDICTED: Canis familiaris similar to Histone ... 44 0.34
20gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Can... 44 0.34
21dbj|AK048390.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 44 0.34
22dbj|AK052987.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 44 0.34
23emb|AJ578054.1|MMU578054 Mus musculus mRNA for VITO1 protein 44 0.34
24gb|AF542181.1| Mus musculus transcription co-factor vestigial-li... 44 0.34
25gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.4
26ref|XM_463451.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
27ref|NM_028785.3| Mus musculus dedicator of cytokinesis 8 (Dock8)... 42 1.4
28gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosom... 42 1.4
29gb|AC144487.1| Gasterosteus aculeatus clone CH213-160O9, complet... 42 1.4
30dbj|AK028968.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 42 1.4
31dbj|AK004816.2| Mus musculus adult male lung cDNA, RIKEN full-le... 42 1.4
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
33gb|BC030316.1| Mus musculus dedicator of cytokinesis 8, mRNA (cD... 42 1.4
34dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
35gb|BC043470.1| Mus musculus dedicator of cytokinesis 8, mRNA (cD... 42 1.4
36gb|BC055295.1| Mus musculus dedicator of cytokinesis 8, mRNA (cD... 42 1.4
37dbj|AK131180.1| Mus musculus mRNA for mFLJ00346 protein 42 1.4
38ref|XM_466171.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
39ref|XM_450686.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
40gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, co... 40 5.3
41emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.3
42gb|AC123695.10| Mus musculus chromosome 15, clone RP23-328C23, c... 40 5.3
43gb|AC004887.2| Homo sapiens PAC clone RP4-789I5 from 7, complete... 40 5.3
44emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein... 40 5.3
45gb|AY123847.1| Nicotiana tabacum glutamate/malate translocator (... 40 5.3
46gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.3
47dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.3
48gb|AE011797.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.3
49gb|AF097363.1| Triticum aestivum heat shock protein 101 (Hsp101b... 40 5.3
50dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.3
51gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 5.3
52gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosom... 40 5.3
53gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.3
54gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.3
55dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
58dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
59gb|AY350626.1| Lobelia flexuosa internal transcribed spacer 1, 5... 40 5.3
60dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
61dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
62gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O... 40 5.3
63ref|NM_210851.1| Eremothecium gossypii AFL051Wp (AFL051W), mRNA 40 5.3
64dbj|AK064804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
65dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
66gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.3
67gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.3
68gb|DQ277648.1| Equus caballus dopamine receptor D4 (DRD4) gene, ... 40 5.3 
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein
          Length = 1104

 Score =  484 bits (244), Expect = e-133
 Identities = 286/300 (95%)
 Strand = Plus / Plus

                                                                       
Query: 100 tagctagcgtggaggcgtccaaggtgggagacccaagcacaggctagctagccgaccagc 159
           ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1   tagctcgcgtggaggtgtccaaggtgggagacccaagcacgggctagctagccgaccagc 60

                                                                       
Query: 160 tgctccaccggagccgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgg 219
           |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61  tgctccgccggagccgatggctggcgccgacgtcgacgtcgggacggagctcaggctcgg 120

                                                                       
Query: 220 gctgccgggaggcggcgccgaggcggccaaggccgggaagaggggctatgaggacaccat 279
           |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgcccgggggcggcgccgaggcggccaaggccgggaagaggggctatgaggacaccat 180

                                                                       
Query: 280 tgacttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga 339
           |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 tgacttgaagctcacgctgcccaccggcggcatgcaggaagactctgccggcaagccgga 240

                                                                       
Query: 340 gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagcc 399
           ||| || |||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 241 gccagccgccgacaaggccaagaggcccgctgaggccgcggccgccgaccccgagaagcc 300
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>ref|XM_469684.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 811

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                       
Query: 174 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
           ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 99  cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 158

                                                                       
Query: 230 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 159 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 218

                                                                       
Query: 282 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
           || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 219 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 278

                                                                       
Query: 340 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
            |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 279 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 338

            
Query: 399 c 399
           |
Sbjct: 339 c 339
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>ref|XM_469685.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1379

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                       
Query: 174 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
           ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 154 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 213

                                                                       
Query: 230 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 214 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 273

                                                                       
Query: 282 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
           || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 274 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 333

                                                                       
Query: 340 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
            |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 334 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 393

            
Query: 399 c 399
           |
Sbjct: 394 c 394
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Minus

                                                                            
Query: 174      cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
                ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 30190671 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 30190612

                                                                            
Query: 230      -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                     |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 30190611 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 30190552

                                                                            
Query: 282      acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
                || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 30190551 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 30190492

                                                                            
Query: 340      -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
                 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 30190491 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 30190432

                 
Query: 399      c 399
                |
Sbjct: 30190431 c 30190431
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>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete
             sequence
          Length = 163972

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                         
Query: 174   cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
             ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 33224 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 33283

                                                                         
Query: 230   -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                  |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 33284 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 33343

                                                                         
Query: 282   acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
             || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 33344 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 33403

                                                                         
Query: 340   -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
              |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 33404 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 33463

              
Query: 399   c 399
             |
Sbjct: 33464 c 33464
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>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein,
            exons 1-5
          Length = 4539

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                        
Query: 174  cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
            ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 2148 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 2207

                                                                        
Query: 230  -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                 |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 2208 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 2267

                                                                        
Query: 282  acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
            || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 2268 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 2327

                                                                        
Query: 340  -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
             |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 2328 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 2387

             
Query: 399  c 399
            |
Sbjct: 2388 c 2388
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Minus

                                                                            
Query: 174      cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
                ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 30282093 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 30282034

                                                                            
Query: 230      -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                     |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 30282033 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 30281974

                                                                            
Query: 282      acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
                || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 30281973 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 30281914

                                                                            
Query: 340      -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
                 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 30281913 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 30281854

                 
Query: 399      c 399
                |
Sbjct: 30281853 c 30281853
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>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene)
          Length = 1068

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                       
Query: 174 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
           ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 151 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 210

                                                                       
Query: 230 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 211 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 270

                                                                       
Query: 282 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
           || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 271 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 330

                                                                       
Query: 340 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
            |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 331 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 390

            
Query: 399 c 399
           |
Sbjct: 391 c 391
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>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full
           insert sequence
          Length = 1092

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                       
Query: 174 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
           ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 160 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 219

                                                                       
Query: 230 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 220 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 279

                                                                       
Query: 282 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
           || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 280 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 339

                                                                       
Query: 340 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
            |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 340 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 399

            
Query: 399 c 399
           |
Sbjct: 400 c 400
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>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full
           insert sequence
          Length = 1180

 Score =  161 bits (81), Expect = 2e-36
 Identities = 201/241 (83%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                       
Query: 174 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 229
           ||||||| |||||||| || |||||||||||||||||| |||| |||||||| |||    
Sbjct: 156 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 215

                                                                       
Query: 230 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 281
                |||| |||||||||||   ||||||||| |||||||||||  ||||| |||||||
Sbjct: 216 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 275

                                                                       
Query: 282 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 339
           || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| ||||  
Sbjct: 276 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 335

                                                                       
Query: 340 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 398
            |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct: 336 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 395

            
Query: 399 c 399
           |
Sbjct: 396 c 396
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 202      gacggagctcaggctcgggctgccggg 228
                ||||||||| |||||||||||||||||
Sbjct: 25359297 gacggagctgaggctcgggctgccggg 25359323
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>gb|AF083344.2|AF083344 Triticum aestivum heat shock protein 101 kDa (HSP101) mRNA, complete
            cds
          Length = 2821

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 230  ggcggcgccgaggcggccaaggccgggaaga 260
            ||||||| ||||||||||||||||| |||||
Sbjct: 2738 ggcggcggcgaggcggccaaggccgtgaaga 2768
to top
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full
           insert sequence
          Length = 1165

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 202 gacggagctcaggctcgggctgccggg 228
           ||||||||| |||||||||||||||||
Sbjct: 143 gacggagctgaggctcgggctgccggg 169
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>gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, complete sequence
          Length = 207069

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 281    gacttgaagctgacgctgcccac 303
              |||||||||||||||||||||||
Sbjct: 165328 gacttgaagctgacgctgcccac 165306
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 202      gacggagctcaggctcgggctgccggg 228
                ||||||||| |||||||||||||||||
Sbjct: 25287473 gacggagctgaggctcgggctgccggg 25287499
to top
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152914

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 202   gacggagctcaggctcgggctgccggg 228
             ||||||||| |||||||||||||||||
Sbjct: 26107 gacggagctgaggctcgggctgccggg 26133
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>ref|NM_153786.1| Mus musculus vestigial like 2 homolog (Drosophila) (Vgll2), mRNA
          Length = 1483

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 218 gggctgccgggaggcggcgccgaggc 243
           ||||||||||||| ||||||||||||
Sbjct: 822 gggctgccgggagccggcgccgaggc 797
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>ref|XM_419164.1| PREDICTED: Gallus gallus similar to calcium-binding tyrosine
           phosphorylation-regulated protein isoform b;
           fibrousheathin II; testis-specific calcium-binding
           protein CBP86 (LOC421078), mRNA
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 9   cttccaccaccaccatctccta 30
           ||||||||||||||||||||||
Sbjct: 733 cttccaccaccaccatctccta 754
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>ref|XM_545380.1| PREDICTED: Canis familiaris similar to Histone H1.2 (H1d)
           (LOC488258), mRNA
          Length = 648

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 353 aaggccaagaggccggcagaggccgcggccgctg 386
           |||||||||||||||||  || ||||||||||||
Sbjct: 67  aaggccaagaggccggccaagtccgcggccgctg 100
to top
>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 193809

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 218   gggctgccgggaggcggcgccgaggc 243
             ||||||||||||| ||||||||||||
Sbjct: 55838 gggctgccgggagccggcgccgaggc 55863
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>dbj|AK048390.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130057C21 product:TRANSCRIPTION COFACTOR
           VESTIGIAL-LIKE 2 PROTEIN homolog [Homo sapiens], full
           insert sequence
          Length = 1499

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 218 gggctgccgggaggcggcgccgaggc 243
           ||||||||||||| ||||||||||||
Sbjct: 978 gggctgccgggagccggcgccgaggc 953
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>dbj|AK052987.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930008K19 product:TRANSCRIPTION COFACTOR
           VESTIGIAL-LIKE 2 PROTEIN homolog [Homo sapiens], full
           insert sequence
          Length = 1494

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 218 gggctgccgggaggcggcgccgaggc 243
           ||||||||||||| ||||||||||||
Sbjct: 978 gggctgccgggagccggcgccgaggc 953
to top
>emb|AJ578054.1|MMU578054 Mus musculus mRNA for VITO1 protein
          Length = 1484

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 218 gggctgccgggaggcggcgccgaggc 243
           ||||||||||||| ||||||||||||
Sbjct: 824 gggctgccgggagccggcgccgaggc 799
to top
>gb|AF542181.1| Mus musculus transcription co-factor vestigial-like 2 protein mRNA,
           complete cds
          Length = 1483

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 218 gggctgccgggaggcggcgccgaggc 243
           ||||||||||||| ||||||||||||
Sbjct: 822 gggctgccgggagccggcgccgaggc 797
to top
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 330   gcaagccggagccggcagccgacaaggcc 358
             ||||||||||| |||| ||||||||||||
Sbjct: 68471 gcaagccggagtcggccgccgacaaggcc 68443
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>ref|XM_463451.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1434

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  cgggaggcggcgccgaggcgg 245
            |||||||||||||||||||||
Sbjct: 1313 cgggaggcggcgccgaggcgg 1333
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>ref|NM_028785.3| Mus musculus dedicator of cytokinesis 8 (Dock8), mRNA
          Length = 7810

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 287  aagctgacgctgcccaccggc 307
            |||||||||||||||||||||
Sbjct: 5200 aagctgacgctgcccaccggc 5180
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>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete sequence
          Length = 193053

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    aagctgacgctgcccaccggc 307
              |||||||||||||||||||||
Sbjct: 162761 aagctgacgctgcccaccggc 162781
to top
>gb|AC144487.1| Gasterosteus aculeatus clone CH213-160O9, complete sequence
          Length = 181162

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 280    tgacttgaagctgacgctgcc 300
              |||||||||||||||||||||
Sbjct: 131546 tgacttgaagctgacgctgcc 131526
to top
>dbj|AK028968.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732475D14 product:similar to CDNA
           FLJ30931 FIS, CLONE FEBRA2006873, WEAKLY SIMILAR TO TRG
           PROTEIN [Homo sapiens], full insert sequence
          Length = 2869

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 287 aagctgacgctgcccaccggc 307
           |||||||||||||||||||||
Sbjct: 258 aagctgacgctgcccaccggc 238
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>dbj|AK004816.2| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1200017A24 product:similar to CDNA
           FLJ30931 FIS, CLONE FEBRA2006873, WEAKLY SIMILAR TO TRG
           PROTEIN [Homo sapiens], full insert sequence
          Length = 2694

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 287 aagctgacgctgcccaccggc 307
           |||||||||||||||||||||
Sbjct: 338 aagctgacgctgcccaccggc 318
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 225      cgggaggcggcgccgaggcgg 245
                |||||||||||||||||||||
Sbjct: 32937080 cgggaggcggcgccgaggcgg 32937100
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>gb|BC030316.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone
            IMAGE:5371956), complete cds
          Length = 3684

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 287  aagctgacgctgcccaccggc 307
            |||||||||||||||||||||
Sbjct: 2191 aagctgacgctgcccaccggc 2171
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>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0010B10
          Length = 155263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  cgggaggcggcgccgaggcgg 245
            |||||||||||||||||||||
Sbjct: 3308 cgggaggcggcgccgaggcgg 3328
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>gb|BC043470.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone
            IMAGE:5150248), partial cds
          Length = 3366

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 287  aagctgacgctgcccaccggc 307
            |||||||||||||||||||||
Sbjct: 1003 aagctgacgctgcccaccggc 983
to top
>gb|BC055295.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone
            IMAGE:4485826), partial cds
          Length = 3157

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 287  aagctgacgctgcccaccggc 307
            |||||||||||||||||||||
Sbjct: 1031 aagctgacgctgcccaccggc 1011
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>dbj|AK131180.1| Mus musculus mRNA for mFLJ00346 protein
          Length = 3778

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 287  aagctgacgctgcccaccggc 307
            |||||||||||||||||||||
Sbjct: 2163 aagctgacgctgcccaccggc 2143
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>ref|XM_466171.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gggaggcggcgccgaggcgg 245
           ||||||||||||||||||||
Sbjct: 337 gggaggcggcgccgaggcgg 318
to top
>ref|XM_450686.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 983

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 ggaggcggcgccgaggcggc 246
           ||||||||||||||||||||
Sbjct: 141 ggaggcggcgccgaggcggc 122
to top
>gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, complete sequence
          Length = 188514

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 264    gctatgaggacaccattgacttga 287
              |||||||||||||||||| |||||
Sbjct: 167734 gctatgaggacaccattgccttga 167711
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     ccggcagaggccgcggccgc 384
               ||||||||||||||||||||
Sbjct: 1910963 ccggcagaggccgcggccgc 1910944
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>gb|AC123695.10| Mus musculus chromosome 15, clone RP23-328C23, complete sequence
          Length = 217334

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tccaccaccaccatctccta 30
              ||||||||||||||||||||
Sbjct: 115774 tccaccaccaccatctccta 115755
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>gb|AC004887.2| Homo sapiens PAC clone RP4-789I5 from 7, complete sequence
          Length = 176929

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    gcttccaccaccaccatctc 27
            ||||||||||||||||||||
Sbjct: 2224 gcttccaccaccaccatctc 2243
to top
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene)
          Length = 1778

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 acggagctcaggctcgggct 222
           ||||||||||||||||||||
Sbjct: 480 acggagctcaggctcgggct 499
to top
>gb|AY123847.1| Nicotiana tabacum glutamate/malate translocator (DiT2) mRNA,
           complete cds; nuclear gene for plastid product
          Length = 2195

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   cttccaccaccaccatctcc 28
           ||||||||||||||||||||
Sbjct: 351 cttccaccaccaccatctcc 370
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     ggcaagccggagccggcagc 348
               ||||||||||||||||||||
Sbjct: 2516092 ggcaagccggagccggcagc 2516073
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     cggcgccgaggcggccaagg 251
               ||||||||||||||||||||
Sbjct: 4634698 cggcgccgaggcggccaagg 4634679
to top
>gb|AE011797.1| Xanthomonas axonopodis pv. citri str. 306,  section 175 of 469 of the
            complete genome
          Length = 10238

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  ccggcagaggccgcggccgc 384
            ||||||||||||||||||||
Sbjct: 7646 ccggcagaggccgcggccgc 7627
to top
>gb|AF097363.1| Triticum aestivum heat shock protein 101 (Hsp101b) mRNA, complete cds
          Length = 3107

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 233  ggcgccgaggcggccaaggccgggaaga 260
            |||| ||||||||||||||||| |||||
Sbjct: 2788 ggcggcgaggcggccaaggccgtgaaga 2815
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     gcgccgaggcggccaaggcc 253
               ||||||||||||||||||||
Sbjct: 4391626 gcgccgaggcggccaaggcc 4391607
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 293     acgctgcccaccggcggcat 312
               ||||||||||||||||||||
Sbjct: 1668425 acgctgcccaccggcggcat 1668444
to top
>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete sequence
          Length = 212761

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ccaccaccaccatctcctaa 31
              ||||||||||||||||||||
Sbjct: 163462 ccaccaccaccatctcctaa 163443
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    gcaagccggagccggcagcc 349
              ||||||||||||||||||||
Sbjct: 342622 gcaagccggagccggcagcc 342641
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     cgccgaggcggccaaggccg 254
               ||||||||||||||||||||
Sbjct: 1496954 cgccgaggcggccaaggccg 1496935
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 227      ggaggcggcgccgaggcggc 246
                ||||||||||||||||||||
Sbjct: 12241065 ggaggcggcgccgaggcggc 12241084
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 227      ggaggcggcgccgaggcggc 246
                ||||||||||||||||||||
Sbjct: 26248489 ggaggcggcgccgaggcggc 26248508
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      gggaggcggcgccgaggcgg 245
                ||||||||||||||||||||
Sbjct: 20843630 gggaggcggcgccgaggcgg 20843649
to top
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455H11
          Length = 101607

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   ggaggcggcgccgaggcggc 246
             ||||||||||||||||||||
Sbjct: 23117 ggaggcggcgccgaggcggc 23136
to top
>gb|AY350626.1| Lobelia flexuosa internal transcribed spacer 1, 5.8S ribosomal RNA
           gene, and internal transcribed spacer 2, complete
           sequence
          Length = 643

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ccgggaggcggcgccgaggc 243
           ||||||||||||||||||||
Sbjct: 200 ccgggaggcggcgccgaggc 181
to top
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   ggaggcggcgccgaggcggc 246
             ||||||||||||||||||||
Sbjct: 24619 ggaggcggcgccgaggcggc 24638
to top
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_H01
          Length = 121377

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   gggaggcggcgccgaggcgg 245
             ||||||||||||||||||||
Sbjct: 86091 gggaggcggcgccgaggcgg 86110
to top
>gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O3 (LANL), complete sequence
          Length = 164538

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atcacaaggcatcttgcata 50
              ||||||||||||||||||||
Sbjct: 108175 atcacaaggcatcttgcata 108194
to top
>ref|NM_210851.1| Eremothecium gossypii AFL051Wp (AFL051W), mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 gcaagccggagccggcagcc 349
           ||||||||||||||||||||
Sbjct: 54  gcaagccggagccggcagcc 73
to top
>dbj|AK064804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D13, full
           insert sequence
          Length = 1176

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 ggaggcggcgccgaggcggc 246
           ||||||||||||||||||||
Sbjct: 141 ggaggcggcgccgaggcggc 122
to top
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E12
          Length = 152448

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    ggaggcggcgccgaggcggc 246
              ||||||||||||||||||||
Sbjct: 140347 ggaggcggcgccgaggcggc 140366
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     cggcgccgaggcggccaagg 251
               ||||||||||||||||||||
Sbjct: 4638645 cggcgccgaggcggccaagg 4638626
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     cggcgccgaggcggccaagg 251
               ||||||||||||||||||||
Sbjct: 2209949 cggcgccgaggcggccaagg 2209930
to top
>gb|DQ277648.1| Equus caballus dopamine receptor D4 (DRD4) gene, exons 1 through 4
            and partial cds
          Length = 2871

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  ggaggcggcgccgaggcggc 246
            ||||||||||||||||||||
Sbjct: 2697 ggaggcggcgccgaggcggc 2716


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,947,854
Number of Sequences: 3902068
Number of extensions: 2947854
Number of successful extensions: 76102
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74840
Number of HSP's gapped (non-prelim): 1253
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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