ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet22f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 65 5e-11
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 61 7e-10
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 42 4e-04
4SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1)... 36 0.020
5EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 36 0.020
6GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-... 29 3.1
7KPRS_CLOAB (Q97E93) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 28 4.1
8COL_RABIT (P42890) Colipase precursor 28 5.4
9LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 28 5.4
10P2RX2_CAVPO (O70397) P2X purinoceptor 2 (ATP receptor) (P2X2) (P... 28 5.4
11SERC_ERWCT (Q6D400) Phosphoserine aminotransferase (EC 2.6.1.52)... 28 5.4
12DPO3A_NEIMB (Q9JXZ2) DNA polymerase III alpha subunit (EC 2.7.7.7) 28 7.0
13DPO3A_NEIMA (Q9JVX8) DNA polymerase III alpha subunit (EC 2.7.7.7) 28 7.0
14GP149_MOUSE (Q3UVY1) Probable G-protein coupled receptor 149 (G-... 27 9.1
15PGLR_GIBFU (Q07181) Polygalacturonase precursor (EC 3.2.1.15) (P... 27 9.1

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 203 VPCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDF-AGGPTGRFSNGLTTVDVISQLLG 376
           +P  F FGDS+ D GNNN + +  + NY PYG+DF  G  TGRFSNG    D IS+ LG
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLG 181



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 60.8 bits (146), Expect = 7e-10
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +2

Query: 203 VPCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDFA-GGPTGRFSNGLTTVDVISQLLG 376
           +P  F FGDS+ D GNNN + +  ++NY PYG+DF     TGRFSNG+   D +++ +G
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMG 260



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +2

Query: 206 PCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLG 376
           P  F FGDS  D G  +     A    PP+G  F G P GR+ +G   +D I++ LG
Sbjct: 29  PAIFNFGDSNSDTGGLSAAFGQAG---PPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82



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>SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1) (Fragment)|
          Length = 18

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +2

Query: 194 EPQVPCYFVFGDSLVDNG 247
           +PQVP YF+FGDSL DNG
Sbjct: 1   DPQVPXYFIFGDSLYDNG 18



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +2

Query: 206 PCYFVFGDSLVDNGNNNGIVSLARANYP---PYGVDFAGGPTGRFSNGLTTVDVISQ 367
           P  F FGDS  D G        A A YP   PYG  F    TGR+S+G   +D I++
Sbjct: 33  PAIFNFGDSNSDTGGK------AAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAE 83



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>GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-protein coupled|
           receptor PGR10)
          Length = 731

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
 Frame = +2

Query: 23  LVAITINLTHSLA--------HSNQQQLTRSAPVPLGSAMAGR 127
           LV +++ LTH L         HSN Q+++R A +P     AGR
Sbjct: 205 LVGLSVPLTHRLLCSEEPPRLHSNYQEISRGASIPGTPPTAGR 247



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>KPRS_CLOAB (Q97E93) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 319

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = +2

Query: 233 LVDNGNN------NGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLGFD 382
           ++++G N      N   SLA       GV       G+FSNG T VD+   + G D
Sbjct: 1   MINHGKNIKIFTGNSYPSLAEEIADIIGVQVGDSRVGKFSNGETAVDINETVRGTD 56



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>COL_RABIT (P42890) Colipase precursor|
          Length = 107

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 25  CRHHNQSHSLARSLQPAAAHSQCSSAT 105
           C HH+ + SLAR    A+ +S+CS  T
Sbjct: 44  CCHHSSALSLARCAPKASENSECSPQT 70



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +2

Query: 215 FVFGDSLVDNGNNNGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLGFD 382
           +VFGDSL D GNN             Y VD   G   +  N     D I+Q LG +
Sbjct: 29  YVFGDSLSDGGNNG-----------RYTVDGINGTESKLYN-----DFIAQQLGIE 68



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>P2RX2_CAVPO (O70397) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic|
           receptor)
          Length = 474

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 145 QRPPARPPRHCTAQWH 98
           Q PP  PPRHC++ WH
Sbjct: 397 QAPP--PPRHCSSPWH 410



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>SERC_ERWCT (Q6D400) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)|
          Length = 361

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = +2

Query: 221 FGDSLVDNGNNNGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLG 376
           FGD +V    ++ I+S  R +   YGV +AG        GLT V V   LLG
Sbjct: 165 FGDKIVVADYSSSILS-RRIDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLG 215



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>DPO3A_NEIMB (Q9JXZ2) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1144

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 236 VDNGNNNGIVSLARANYPPYGVDFAGG 316
           ++NG+N+G++ L+ A+Y   GV+   G
Sbjct: 122 LENGDNSGLICLSGAHYGEVGVNLLNG 148



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>DPO3A_NEIMA (Q9JVX8) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1144

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 236 VDNGNNNGIVSLARANYPPYGVDFAGG 316
           ++NG+N+G++ L+ A+Y   GV+   G
Sbjct: 122 LENGDNSGLICLSGAHYGEVGVNLLNG 148



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>GP149_MOUSE (Q3UVY1) Probable G-protein coupled receptor 149 (G-protein coupled|
           receptor PGR10)
          Length = 732

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
 Frame = +2

Query: 23  LVAITINLTHSLA--------HSNQQQLTRSAPVPLGSAMAGR 127
           L  +++ LTH L         H+N Q+++R A  P   A AGR
Sbjct: 206 LAVLSVPLTHQLLCSEEPLRLHANYQEISRGASTPGTPAAAGR 248



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>PGLR_GIBFU (Q07181) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase)|
           (FmPG)
          Length = 373

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
 Frame = +2

Query: 248 NNNGIVSLARANYPPYGVDFA-----GGPTGRFSNGL 343
           NN    ++A  N   YGVD       GGPTG+ +NG+
Sbjct: 279 NNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGV 315


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.122    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,998,026
Number of Sequences: 219361
Number of extensions: 533196
Number of successful extensions: 1859
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1857
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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