ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet22e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 204 1e-52
2CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 204 1e-52
3CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 203 2e-52
4CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 200 2e-51
5CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 197 8e-51
6CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 197 1e-50
7CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 197 1e-50
8CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 196 3e-50
9CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 195 4e-50
10CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 195 5e-50
11CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 194 8e-50
12CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 193 1e-49
13CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 193 1e-49
14CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 193 2e-49
15CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 192 2e-49
16CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 192 2e-49
17CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 192 3e-49
18CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 192 3e-49
19CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 192 4e-49
20CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 191 6e-49
21CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 191 7e-49
22CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 191 7e-49
23CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 191 9e-49
24CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 190 1e-48
25CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 189 3e-48
26CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 187 1e-47
27CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 186 2e-47
28CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 186 2e-47
29CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 185 4e-47
30CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 185 4e-47
31CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 184 7e-47
32CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 184 9e-47
33CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 184 9e-47
34CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 182 3e-46
35CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 182 4e-46
36CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 173 2e-43
37CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 171 6e-43
38CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 167 9e-42
39CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 167 1e-41
40CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 167 1e-41
41CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 167 1e-41
42CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 166 2e-41
43CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 165 4e-41
44CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 165 6e-41
45CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 163 2e-40
46CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 161 6e-40
47CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 158 5e-39
48CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 157 9e-39
49CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 155 6e-38
50CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 146 3e-35
51CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 144 1e-34
52CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 138 6e-33
53CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 133 2e-31
54CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 133 2e-31
55CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 129 4e-30
56CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 123 2e-28
57CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 97 1e-20
58CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 90 3e-18
59CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 80 2e-15
60CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 74 2e-13
61LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 69 4e-12
62CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 65 1e-10
63LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 60 2e-09
64CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 55 6e-08
65CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 54 2e-07
66CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 54 2e-07
67CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 53 3e-07
68CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 52 5e-07
69FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ... 40 0.003
70CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl... 39 0.006
71CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 37 0.030
72CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 37 0.030
73CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 36 0.050
74CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 36 0.050
75CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl... 35 0.11
76CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe... 32 0.56
77BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh... 32 0.56
78GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (G... 30 2.1
79HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) ... 30 2.1
80CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl... 30 2.8
81GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--... 30 2.8
82RUVB_NITWN (Q3SP14) Holliday junction ATP-dependent DNA helicase... 30 3.6
83GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 30 3.6
84GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 30 3.6
85GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF... 29 4.7
86YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.... 29 4.7
87STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (S... 29 4.7
88STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (S... 29 4.7
89MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 11... 29 4.7
90GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--... 29 4.7
91GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 29 4.7
92GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 29 4.7
93SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit... 29 6.2
94S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G... 29 6.2
95GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 29 6.2
96YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicas... 29 6.2
97L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor... 29 6.2
98GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precurso... 29 6.2
99GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 29 6.2
100BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9) 28 8.1
101PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101 28 8.1
102TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14... 28 8.1
103HMEN_DROME (P02836) Segmentation polarity homeobox protein engra... 28 8.1
104MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein) 28 8.1
105IF2_MYCPA (Q73VV4) Translation initiation factor IF-2 28 8.1
106GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 28 8.1 
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  204 bits (518), Expect = 1e-52
 Identities = 101/130 (77%), Positives = 107/130 (82%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           MAA+TMALSSPA     +KL+ GAS V G GR+TMR           PWYG DRV YLGP
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            SGEPPSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 121 NGVKFGEAVW 130
to top
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  204 bits (518), Expect = 1e-52
 Identities = 101/130 (77%), Positives = 105/130 (80%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           MAA TMALSSP     A+KL+  AS + G GRITMR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 121 NGVKFGEAVW 130
to top
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  203 bits (516), Expect = 2e-52
 Identities = 100/126 (79%), Positives = 103/126 (81%), Gaps = 2/126 (1%)
 Frame = +2

Query: 80  MAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPLSGE 253
           MAA TMALSSPA+    A+ V G GRITMR             PWYG DRVLYLGPLSGE
Sbjct: 1   MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGE 60

Query: 254 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 433
           PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 120

Query: 434 FGEAVW 451
           FGEAVW
Sbjct: 121 FGEAVW 126
to top
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  200 bits (508), Expect = 2e-51
 Identities = 98/130 (75%), Positives = 104/130 (80%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           MAA TMALSSP     A+KL+  A  + G GR++MR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 121 NGVKFGEAVW 130
to top
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  197 bits (502), Expect = 8e-51
 Identities = 100/132 (75%), Positives = 106/132 (80%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLAG-ASYVLGGGRITMRXXXXX--XXXXXXPWYGPDRVLYL 235
           MA++TMALSSP     A+KL   AS ++G GRITMR             PWYGPDRV YL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  197 bits (501), Expect = 1e-50
 Identities = 98/132 (74%), Positives = 106/132 (80%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXX--PWYGPDRVLYL 235
           MAA+TMALSSP     A+KL+  +S + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  197 bits (500), Expect = 1e-50
 Identities = 99/130 (76%), Positives = 102/130 (78%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSPAMKLAG---ASYVLGGGRITMRXXXXX---XXXXXXPWYGPDRVLYLGP 241
           MAA TMALSSP M  A    +S + G  RITMR              PWYG DRVLYLGP
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 121 NGVKFGEAVW 130
to top
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  196 bits (497), Expect = 3e-50
 Identities = 98/131 (74%), Positives = 105/131 (80%), Gaps = 7/131 (5%)
 Frame = +2

Query: 80  MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 238
           MAA+T ALSSP    A+KL+  +S V G G++TMR             PWYGPDRV YLG
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEAVW
Sbjct: 121 RNGVKFGEAVW 131
to top
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  195 bits (496), Expect = 4e-50
 Identities = 98/131 (74%), Positives = 105/131 (80%), Gaps = 7/131 (5%)
 Frame = +2

Query: 80  MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 238
           MAA+T ALSSP    A+KL+  +S V G G++TMR             PWYGPDRV YLG
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLG 60

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEAVW
Sbjct: 121 RNGVKFGEAVW 131
to top
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  195 bits (495), Expect = 5e-50
 Identities = 97/130 (74%), Positives = 101/130 (77%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 241
           MA++TMALSS A         S   G  R+TMR              PWYGPDRVLYLGP
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 121 NGVKFGEAVW 130
to top
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  194 bits (493), Expect = 8e-50
 Identities = 97/132 (73%), Positives = 104/132 (78%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 235
           MA +TMALSS      A+KL+  +S + G GR+TMR             PWYGPDRV YL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  193 bits (491), Expect = 1e-49
 Identities = 97/132 (73%), Positives = 104/132 (78%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 235
           MAA TMALSS      A+KL+  +S + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  193 bits (491), Expect = 1e-49
 Identities = 96/131 (73%), Positives = 103/131 (78%), Gaps = 7/131 (5%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 238
           MAATTM+LSS      A+K   +S ++G  R+ MR             PWYG DRVLYLG
Sbjct: 1   MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           PLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEA W
Sbjct: 121 RNGVKFGEAGW 131
to top
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  193 bits (490), Expect = 2e-49
 Identities = 95/128 (74%), Positives = 103/128 (80%), Gaps = 5/128 (3%)
 Frame = +2

Query: 83  AATTMALSSPAMKLAGASYVLGG-----GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLS 247
           AA++MALSSP+  LAG +  LG      GR++MR           PWYGPDRV YLGP S
Sbjct: 3   AASSMALSSPS--LAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFS 60

Query: 248 GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 427
           GEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG
Sbjct: 61  GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120

Query: 428 VKFGEAVW 451
           VKFGEAVW
Sbjct: 121 VKFGEAVW 128
to top
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  192 bits (489), Expect = 2e-49
 Identities = 96/132 (72%), Positives = 105/132 (79%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 235
           MAA+TMALSS      A+KL+  +S + G G++TMR             PWYGP+RV YL
Sbjct: 1   MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  192 bits (489), Expect = 2e-49
 Identities = 99/131 (75%), Positives = 105/131 (80%), Gaps = 7/131 (5%)
 Frame = +2

Query: 80  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 238
           MAA+TMALSSPA     +KL+  AS VLG GR+TMR            PWYG DRV YLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEAVW
Sbjct: 121 RNGVKFGEAVW 131
to top
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  192 bits (488), Expect = 3e-49
 Identities = 97/130 (74%), Positives = 105/130 (80%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSPAM-----KLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           MAA+TMALSSPA+     K+A  +S + G GR++MR           PWYGPDRV YLGP
Sbjct: 1   MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDS-PWYGPDRVKYLGP 59

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60  FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 120 NGVKFGEAVW 129
to top
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  192 bits (488), Expect = 3e-49
 Identities = 96/130 (73%), Positives = 101/130 (77%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 241
           MA++TMALSS A         S + G  R+TMR              PWYGPDRVLYLGP
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 121 NGVKFGEAVW 130
to top
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  192 bits (487), Expect = 4e-49
 Identities = 95/132 (71%), Positives = 103/132 (78%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLAGASY-VLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 235
           MAATTMALSS      A+KL+ +S  + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 
Sbjct: 61  GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120

Query: 416 ARNGVKFGEAVW 451
           ARNG+KFGEAVW
Sbjct: 121 ARNGIKFGEAVW 132
to top
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  191 bits (486), Expect = 6e-49
 Identities = 96/132 (72%), Positives = 103/132 (78%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 235
           M A+TMALSSP     A+KL+  +S + G G+  MR             PWYGPDRV YL
Sbjct: 1   MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  191 bits (485), Expect = 7e-49
 Identities = 97/131 (74%), Positives = 101/131 (77%), Gaps = 7/131 (5%)
 Frame = +2

Query: 80  MAATTMALSSPAMK------LAGASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 238
           MAA+TMALSSPA           AS VLG GR+TMR            PWYG DRV YLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEAVW
Sbjct: 121 RNGVKFGEAVW 131
to top
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  191 bits (485), Expect = 7e-49
 Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 5/129 (3%)
 Frame = +2

Query: 80  MAATTMALSSPAMKLAGASYVLGG---GRITMRXXXXX--XXXXXXPWYGPDRVLYLGPL 244
           MAA+TMA+SS AM  AG    +G    GRITMR             PWYGPDRV YLGP 
Sbjct: 1   MAASTMAISSTAM--AGTPIKVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPF 58

Query: 245 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 424
           SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 59  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 118

Query: 425 GVKFGEAVW 451
           GVKFGEAVW
Sbjct: 119 GVKFGEAVW 127
to top
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  191 bits (484), Expect = 9e-49
 Identities = 93/131 (70%), Positives = 100/131 (76%), Gaps = 7/131 (5%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 238
           MAA TMA+SS      A+ +  +S + G G+ TMR             PWYGPDRV YLG
Sbjct: 1   MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL A
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEAVW
Sbjct: 121 RNGVKFGEAVW 131
to top
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  190 bits (483), Expect = 1e-48
 Identities = 96/132 (72%), Positives = 102/132 (77%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 235
           MAA TMALSSP     A+K +  +S + G G+ TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  189 bits (480), Expect = 3e-48
 Identities = 95/132 (71%), Positives = 101/132 (76%), Gaps = 8/132 (6%)
 Frame = +2

Query: 80  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 235
           MAA TMALSS       +KL+  +S + G G+ TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120

Query: 416 ARNGVKFGEAVW 451
           ARNGVKFGEAVW
Sbjct: 121 ARNGVKFGEAVW 132
to top
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  187 bits (475), Expect = 1e-47
 Identities = 93/133 (69%), Positives = 100/133 (75%), Gaps = 9/133 (6%)
 Frame = +2

Query: 80  MAATTMALSSPAM-------KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLY 232
           MAA++MALSSP +           +S  LGG R TMR             PWYGPDRV Y
Sbjct: 1   MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60

Query: 233 LGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 412
           LGP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 413 LARNGVKFGEAVW 451
           L+RNGVKFGEAVW
Sbjct: 121 LSRNGVKFGEAVW 133
to top
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  186 bits (473), Expect = 2e-47
 Identities = 92/132 (69%), Positives = 101/132 (76%), Gaps = 7/132 (5%)
 Frame = +2

Query: 77  AMAATTMALSSPAM-----KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 235
           A ++++MALSSP +     KL  +S  LG  R TMR             PWYGPDRV YL
Sbjct: 3   ASSSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYL 62

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL
Sbjct: 63  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122

Query: 416 ARNGVKFGEAVW 451
           +RNGVKFGEAVW
Sbjct: 123 SRNGVKFGEAVW 134
to top
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  186 bits (473), Expect = 2e-47
 Identities = 94/130 (72%), Positives = 99/130 (76%), Gaps = 6/130 (4%)
 Frame = +2

Query: 80  MAATTMALSSPAM------KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           MAA TMALSS          L+ +S V G  R++MR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKVGS-PWYGPDRVKYLGP 59

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 120 NGVKFGEAVW 129
to top
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  185 bits (470), Expect = 4e-47
 Identities = 92/136 (67%), Positives = 97/136 (71%), Gaps = 5/136 (3%)
 Frame = +2

Query: 59  CSIRQQAMAATTMALSSPAMK--LAGASYVLGGGRITMRXXXX---XXXXXXXPWYGPDR 223
           C I   A A   ++   P     L   + V G  R+TMR              PWYGPDR
Sbjct: 4   CGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDR 63

Query: 224 VLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 403
           VLYLGP SGEPPSYL+GEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVF
Sbjct: 64  VLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVF 123

Query: 404 PELLARNGVKFGEAVW 451
           PELLARNGVKFGEAVW
Sbjct: 124 PELLARNGVKFGEAVW 139
to top
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  185 bits (470), Expect = 4e-47
 Identities = 87/118 (73%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
 Frame = +2

Query: 101 LSSPAMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGE 277
           L+  A+KL+  A  + G  + TMR           PWYGPDRV YLGP SGEPPSYL+GE
Sbjct: 3   LAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 278 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVW
Sbjct: 63  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120
to top
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  184 bits (468), Expect = 7e-47
 Identities = 92/129 (71%), Positives = 97/129 (75%), Gaps = 5/129 (3%)
 Frame = +2

Query: 80  MAATTMALSSPAM---KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPL 244
           MAA TMA++S A+     AG   V G GRITMR             PWYG DRVLYLGPL
Sbjct: 1   MAAATMAITSRALVGKPAAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPL 60

Query: 245 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 424
           SG PPSYL+GEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+   LGCVFPELLARN
Sbjct: 61  SGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARN 120

Query: 425 GVKFGEAVW 451
           GVKFGE VW
Sbjct: 121 GVKFGEGVW 129
to top
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  184 bits (467), Expect = 9e-47
 Identities = 90/131 (68%), Positives = 98/131 (74%), Gaps = 7/131 (5%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 238
           MAA TMALSS      A+ +  +S +   G++TMR             PWYGPDRV YLG
Sbjct: 1   MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P SGE PSYL+GEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL A
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFA 120

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEAVW
Sbjct: 121 RNGVKFGEAVW 131
to top
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  184 bits (467), Expect = 9e-47
 Identities = 84/103 (81%), Positives = 87/103 (84%)
 Frame = +2

Query: 143 LGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 322
           LG GR++MR           PWYGPDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSAD
Sbjct: 8   LGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 67

Query: 323 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           PETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA W
Sbjct: 68  PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASW 110
to top
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  182 bits (463), Expect = 3e-46
 Identities = 87/114 (76%), Positives = 90/114 (78%), Gaps = 3/114 (2%)
 Frame = +2

Query: 119 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 289
           +L G     G  R+TMR              PWYGPDRVLYLGP SGEPPSYL+GEFPGD
Sbjct: 30  QLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGD 89

Query: 290 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 90  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 143
to top
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  182 bits (461), Expect = 4e-46
 Identities = 86/114 (75%), Positives = 90/114 (78%), Gaps = 3/114 (2%)
 Frame = +2

Query: 119 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 289
           +L G     G  R+TMR              PWYGPDRV+YLGP SGEPPSYL+GEFPGD
Sbjct: 30  QLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGD 89

Query: 290 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 90  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 143
to top
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  173 bits (438), Expect = 2e-43
 Identities = 86/131 (65%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
 Frame = +2

Query: 62  SIRQQAMAA-TTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 238
           +I+Q A A  T +  S+  +   GA   +GGGR++MR            WYGPDR  YLG
Sbjct: 5   AIQQSAFAGQTALKQSNELVCKIGA---VGGGRVSMRRTVKSAPTSI--WYGPDRPKYLG 59

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L+
Sbjct: 60  PFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 419 RNGVKFGEAVW 451
           +NGVKFGEAVW
Sbjct: 120 KNGVKFGEAVW 130
to top
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  171 bits (434), Expect = 6e-43
 Identities = 86/132 (65%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
 Frame = +2

Query: 62  SIRQQAMAATTMALSSPAM--KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYL 235
           +I+Q A A  T+      +  K+ G      GGR++MR            WYGPDR  YL
Sbjct: 5   TIQQSAFAGQTLLKPQNELVRKVGG-----NGGRVSMRRTIKSAPESI--WYGPDRPKYL 57

Query: 236 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           GP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 58  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117

Query: 416 ARNGVKFGEAVW 451
           A+NGVKFGEAVW
Sbjct: 118 AKNGVKFGEAVW 129
to top
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  167 bits (424), Expect = 9e-42
 Identities = 89/129 (68%), Positives = 95/129 (73%), Gaps = 5/129 (3%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPL 244
           MAA+TMALSS      AMKLA ++  LG GR++MR           PWYGPDRV YLGP 
Sbjct: 1   MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPF 60

Query: 245 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 424
           SGE PSYL+GEF G        LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 61  SGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 112

Query: 425 GVKFGEAVW 451
           GVKFGEAVW
Sbjct: 113 GVKFGEAVW 121
to top
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  167 bits (423), Expect = 1e-41
 Identities = 82/131 (62%), Positives = 93/131 (70%)
 Frame = +2

Query: 59  CSIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 238
           C+I+Q A     +  S         ++  G GRITMR            WYG DR  YLG
Sbjct: 4   CAIQQSAFVGQAVGKSQNEFIRKVGNF--GEGRITMRRTVKSAPQSI--WYGEDRPKYLG 59

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L+
Sbjct: 60  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 419 RNGVKFGEAVW 451
           +NGVKFGEAVW
Sbjct: 120 KNGVKFGEAVW 130
to top
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  167 bits (422), Expect = 1e-41
 Identities = 83/130 (63%), Positives = 93/130 (71%)
 Frame = +2

Query: 62  SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           +I+Q A A  T   S   +     S+  GGGR TMR            WYG DR  YLGP
Sbjct: 5   AIQQSAFAGQTALKSQNELVRKIGSF--GGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 422 NGVKFGEAVW 451
           NGV FGEAVW
Sbjct: 121 NGVTFGEAVW 130
to top
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  167 bits (422), Expect = 1e-41
 Identities = 75/83 (90%), Positives = 78/83 (93%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 382
           PW+GPD V YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML
Sbjct: 11  PWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 70

Query: 383 GALGCVFPELLARNGVKFGEAVW 451
           GALGCVFPELL+RNGVKFGEAVW
Sbjct: 71  GALGCVFPELLSRNGVKFGEAVW 93
to top
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  166 bits (421), Expect = 2e-41
 Identities = 83/130 (63%), Positives = 92/130 (70%)
 Frame = +2

Query: 62  SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           +I Q A A  T   S   +     S+   GGR TMR            WYG DR  YLGP
Sbjct: 5   AIEQSAFAGQTALKSQNELVRKIGSF--NGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 422 NGVKFGEAVW 451
           NGVKFGEAVW
Sbjct: 121 NGVKFGEAVW 130
to top
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  165 bits (418), Expect = 4e-41
 Identities = 77/101 (76%), Positives = 83/101 (82%)
 Frame = +2

Query: 149 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 328
           GGRITMR            WYGPDR  YLGP S + PSYL+GEFPGDYGWDTAGLSADPE
Sbjct: 30  GGRITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87

Query: 329 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVW
Sbjct: 88  TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVW 128



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 278 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 427
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
to top
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  165 bits (417), Expect = 6e-41
 Identities = 75/82 (91%), Positives = 76/82 (92%)
 Frame = +2

Query: 206 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 385
           WYG DR LYLGP SG PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG
Sbjct: 49  WYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 108

Query: 386 ALGCVFPELLARNGVKFGEAVW 451
           ALGCV PELLA+NGVKFGEAVW
Sbjct: 109 ALGCVTPELLAKNGVKFGEAVW 130
to top
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  163 bits (413), Expect = 2e-40
 Identities = 75/101 (74%), Positives = 82/101 (81%)
 Frame = +2

Query: 149 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 328
           GGR+TMR            WYG DR  YLGP S + PSYL+GEFPGDYGWDTAGLSADPE
Sbjct: 4   GGRVTMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61

Query: 329 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVW
Sbjct: 62  TFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 102
to top
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  161 bits (408), Expect = 6e-40
 Identities = 76/99 (76%), Positives = 80/99 (80%)
 Frame = +2

Query: 155 RITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETF 334
           RITMR            WYGPDR  YLGP S   PSYL+GEFPGDYGWDTA +SADPETF
Sbjct: 35  RITMRRTVRSAPESI--WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETF 92

Query: 335 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           AKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVW
Sbjct: 93  AKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVW 131
to top
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  158 bits (400), Expect = 5e-39
 Identities = 75/102 (73%), Positives = 79/102 (77%)
 Frame = +2

Query: 146 GGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADP 325
           G  R TMR            WYGPDR  YLGP S + PSYL+GEFPGDYGWDTAGLSADP
Sbjct: 31  GQARFTMRRTVKSAPESI--WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADP 88

Query: 326 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           ETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVW
Sbjct: 89  ETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130
to top
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  157 bits (398), Expect = 9e-39
 Identities = 81/130 (62%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
 Frame = +2

Query: 77  AMAATTMA---LSSPAMKLAGASYVLGG--GRITMRXXXXXXXXXXXPWYGPDRVLYLGP 241
           AM +T +A   L  P  +L+    VLG    R+TMR            WYG DR  +LGP
Sbjct: 6   AMHSTALAGQSLVKPVNELSRK--VLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGP 63

Query: 242 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
            SGE PSYL+GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA+
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 422 NGVKFGEAVW 451
           +GVKFGEAVW
Sbjct: 124 SGVKFGEAVW 133



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +2

Query: 236 GPLSGE--PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 409
           GPL GE   P Y  G F      D  GL+ DP+TFA+ +  E+ + R AM    G     
Sbjct: 182 GPL-GEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQA 234

Query: 410 LLARNG 427
           ++   G
Sbjct: 235 IVTGKG 240
to top
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  155 bits (391), Expect = 6e-38
 Identities = 72/100 (72%), Positives = 80/100 (80%)
 Frame = +2

Query: 152 GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPET 331
           GR +MR            WYG DR  +LGP S + PSYL+GEFPGDYGWDTAGLSADPET
Sbjct: 32  GRFSMRRTVKAVPQSI--WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89

Query: 332 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           FAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVW
Sbjct: 90  FAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVW 129
to top
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  146 bits (368), Expect = 3e-35
 Identities = 66/71 (92%), Positives = 68/71 (95%)
 Frame = +2

Query: 239 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 418
           P SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFPELL+
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 419 RNGVKFGEAVW 451
           RNGVKFGEAVW
Sbjct: 61  RNGVKFGEAVW 71
to top
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  144 bits (363), Expect = 1e-34
 Identities = 75/119 (63%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = +2

Query: 98  ALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGE 277
           A +SP   +A A+     GRITM             WYGPDRV YLGP S + PSYL+GE
Sbjct: 27  ASASPLRDIAAAT----NGRITMGNDL---------WYGPDRVKYLGPFSAQTPSYLNGE 73

Query: 278 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVW 451
           FPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L +  GV+F E VW
Sbjct: 74  FPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVW 132



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +2

Query: 221 RVLYLGPLSGEPPSYLSGE------FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 382
           +VL +G + G   + L G       +PG   +D  GL+ DP TFA+ +  E+ + R AM 
Sbjct: 166 QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225

Query: 383 GALGCVFPELLARNG 427
              G     ++   G
Sbjct: 226 SMFGFFVQAIVTGKG 240
to top
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  138 bits (348), Expect = 6e-33
 Identities = 64/83 (77%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
 Frame = +2

Query: 206 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 385
           WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 47  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 386 ALGCVFPELLAR-NGVKFGEAVW 451
           ALGC+FPE+L +   V F E VW
Sbjct: 107 ALGCIFPEVLEKWVKVDFKEPVW 129



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 278 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 427
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G     ++   G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
to top
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  133 bits (335), Expect = 2e-31
 Identities = 62/83 (74%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
 Frame = +2

Query: 206 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 385
           WYGPDR  +LGP S   P+YL+GEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LG
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 386 ALGCVFPELLAR-NGVKFGEAVW 451
           ALG + PELL+   GVKFGE VW
Sbjct: 99  ALGILTPELLSTYAGVKFGEPVW 121



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 278 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 427
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
to top
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  133 bits (334), Expect = 2e-31
 Identities = 61/83 (73%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
 Frame = +2

Query: 206 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 382
           +YGP+R  +LGP S    P+YL+GEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 36  FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95

Query: 383 GALGCVFPELLARNGVKFGEAVW 451
           GALGC  PELLA++G KFGEAVW
Sbjct: 96  GALGCQTPELLAKSGTKFGEAVW 118
to top
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  129 bits (323), Expect = 4e-30
 Identities = 62/77 (80%), Positives = 65/77 (84%)
 Frame = +2

Query: 221 RVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 400
           RV YLGP SGE PSYL+GEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM  ALGC+
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117

Query: 401 FPELLARNGVKFGEAVW 451
           FPELL+  G  FGEAVW
Sbjct: 118 FPELLSVMGQGFGEAVW 134
to top
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  123 bits (309), Expect = 2e-28
 Identities = 57/84 (67%), Positives = 70/84 (83%), Gaps = 2/84 (2%)
 Frame = +2

Query: 206 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 382
           +YGPDR  +LGP S  + P YL+GEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 383 GALGCVFPELLAR-NGVKFGEAVW 451
           GALG + PELL++  GV+FGE VW
Sbjct: 93  GALGILTPELLSQYAGVQFGEPVW 116



 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 278 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 427
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
to top
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 97.4 bits (241), Expect = 1e-20
 Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
 Frame = +2

Query: 206 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 385
           +YGPD       L  + P   +GEFPGDYGWDTAGLSADPETF + RELE+IH R  +LG
Sbjct: 57  FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLG 115

Query: 386 ALGCVFPELLA-RNGVKFGE-AVW 451
           ALG V PELLA  +G+KFG+ A+W
Sbjct: 116 ALGMVTPELLADEDGIKFGDAAIW 139



 Score = 32.3 bits (72), Expect = 0.56
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 278 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 427
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
to top
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
 Frame = +2

Query: 206 WYGPDRVLYL--GPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 376
           WYGPDR ++L  G L   E P YL+GE  GDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121

Query: 377 MLGALGCVFPELLARNGVKFG-EAVW 451
           MLGA G + PE L + G   G EAVW
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVW 147
to top
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
 Frame = +2

Query: 95  MALSSPAMKLAGA------SYVLGGGRITMRXXXXXXXXXXXPWY----GPDRVLYLGPL 244
           +A SSP+ +  G+      +  LGG R+ +                    PDR L+    
Sbjct: 13  VAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP-- 70

Query: 245 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 424
              PP +L G  PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA G   PELL + 
Sbjct: 71  GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKI 130

Query: 425 GV 430
           G+
Sbjct: 131 GI 132
to top
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 34/72 (47%), Positives = 44/72 (61%)
 Frame = +2

Query: 215 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 394
           PDR L+       PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G
Sbjct: 63  PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120

Query: 395 CVFPELLARNGV 430
              PE L + GV
Sbjct: 121 IFIPEFLTKIGV 132
to top
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = +2

Query: 254 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 433
           PP YL+GE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ PELL  NG  
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG-NGAW 438

Query: 434 F 436
           F
Sbjct: 439 F 439



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +2

Query: 245 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
           + EPP+ L+GE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ PELL +
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK 251



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = +2

Query: 257 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 436
           PS+L+GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P+ L       
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64

Query: 437 GEAVW 451
           G+ +W
Sbjct: 65  GKGIW 69
to top
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 242 LSGEP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 415
           + G+P PSYL G  PGD+G+D+ GL   P    + +E E+IHCRWAML   G + PE L
Sbjct: 50  MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108
to top
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = +2

Query: 251 EPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 421
           +PP++L+GE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + PELL +
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK 223



 Score = 36.6 bits (83), Expect = 0.030
 Identities = 21/43 (48%), Positives = 26/43 (60%)
 Frame = +2

Query: 323 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 451
           P  + + R  EV + R AML  +GCV+PELL  NGV F   VW
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELLG-NGVWF--EVW 40
to top
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +2

Query: 257 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 430
           P YL+G   GD G+D  GL+ DPE      + E+++ RWAMLG  G + PE+  + G+
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 121
to top
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 28/63 (44%), Positives = 35/63 (55%)
 Frame = +2

Query: 257 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 436
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   LG    +  A +G+ +
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ--AWSGIPW 125

Query: 437 GEA 445
            EA
Sbjct: 126 FEA 128
to top
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +2

Query: 257 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 394
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118
to top
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
 Frame = +2

Query: 80  MAATTMALSSPAMKLAGASYVLGGGRITM---RXXXXXXXXXXXP--WYGPDRVLYLGPL 244
           MA   +  SS     A A+  + G RI+    R           P    G +R L+    
Sbjct: 1   MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFA-- 58

Query: 245 SGEPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 406
           S +  SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+AMLGA G + P
Sbjct: 59  SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117

Query: 407 ELLARNGV 430
           E+L + G+
Sbjct: 118 EILGKAGL 125
to top
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = +2

Query: 257 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 436
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG    +  A +G+ +
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ--AWSGIPW 125

Query: 437 GEA 445
            EA
Sbjct: 126 FEA 128
to top
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
 Frame = +2

Query: 233 LGPLSGEPPSYL-SGEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 406
           + P +G+  S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191

Query: 407 ELLARN--GVKFGEAVW 451
           E ++ +  G  +G+A +
Sbjct: 192 EAVSGDTWGTYWGDATF 208
to top
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 208
           MAA TMALSSP     A+KL+  AS + G GRITMR           PW
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPW 49
to top
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 43/106 (40%)
 Frame = +2

Query: 257 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 343
           P YL G   GDYG+D  GL    E             AKN                    
Sbjct: 62  PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPF 121

Query: 344 ------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 445
                       RE E+IH RWAML  LG +  E L   GV + +A
Sbjct: 122 QPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGVTWQDA 165



 Score = 33.9 bits (76), Expect = 0.19
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 224 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 394
           VL +G +  +  + L  E   +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
to top
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 45/108 (41%)
 Frame = +2

Query: 257 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 343
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 344 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 445
                         RE E+IH RWAML  LG +  E  A  GV + EA
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
to top
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.8 bits (81), Expect = 0.050
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 224 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 394
           VL +G +  +  + L  E   +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 44/120 (36%)
 Frame = +2

Query: 218 DRVL-YLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------ 343
           DR L Y G +S   P +L G   GDYG+D  GL    E             AKN      
Sbjct: 54  DRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVI 110

Query: 344 --------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 445
                                     RE E+IH RWAML  LG +  E L   GV + +A
Sbjct: 111 GTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL--TGVTWQDA 168
to top
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 35.8 bits (81), Expect = 0.050
 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 43/97 (44%)
 Frame = +2

Query: 254 PPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 343
           PP +L G   GD G+D  GL    E             AKN                   
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 344 -------------RELEVIHCRWAMLGALGCVFPELL 415
                        RE E+IH RWAMLG LG +  E L
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +2

Query: 224 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 391
           VL +G +  +  S L  E   +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
to top
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +2

Query: 80  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 208
           MAA  MALSSP     A+KL+  AS   G GRITMR           PW
Sbjct: 1   MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPW 49
to top
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2|
           (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP)
           (Fragment)
          Length = 150

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 407 ELLARNGVKFGEAVW 451
           ELL +NGVKFGEAVW
Sbjct: 1   ELLVKNGVKFGEAVW 15
to top
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 23/81 (28%), Positives = 42/81 (51%)
 Frame = -2

Query: 447 TASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSPL 268
           + S +L P  +SSSG +  S P   Q+Q ++S++      S S+ + + ++  SP N+  
Sbjct: 228 STSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPNNNGA 280

Query: 267 R*LGGSPESGPR*STRSGPYH 205
           R +GG+  S    +T +   H
Sbjct: 281 RSVGGAATSAATGTTAAAGSH 301
to top
>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 454

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 377 WPSGNGSPPAHGSWRRSPGQQR 312
           WP+ +GSP A GSW  SPG++R
Sbjct: 312 WPAPSGSPDA-GSWLPSPGRRR 332
to top
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 304

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/51 (39%), Positives = 23/51 (45%)
 Frame = -1

Query: 448 DGLAELDTVASEQLGEDAAERAEHGPAAMDHLQLTVLGEGLRVSREPRGVP 296
           DG+ +L  V   +L E AAER  HG  A  H    V G G    R    VP
Sbjct: 70  DGVCDLGIVGQNELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
to top
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 6/36 (16%)
 Frame = +2

Query: 80  MAATTMALSSPA-----MKLA-GASYVLGGGRITMR 169
           MAA+TMALSS       +KLA  +S + G GRITMR
Sbjct: 1   MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMR 36
to top
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 373
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H   C +
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184

Query: 374 AMLGALGC---VFP-----ELLARNGVKFGEAVW 451
           A +   G    V P     ++    G++ G+ +W
Sbjct: 185 AGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
to top
>RUVB_NITWN (Q3SP14) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 348

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = -1

Query: 403 EDAAERAEHGPAAMDHLQLTVLGEGLRVSREPRGVPAIIARELA-----AEVARGLAGER 239
           ED  E+     A + ++ +T  G    ++R  RG P I  R L      AE A   A +R
Sbjct: 185 EDELEKIVSRGARVLNVGMTPDGAN-EIARRARGTPRIAGRLLRRVRDFAEAADAAAIDR 243

Query: 238 AEVEHAVGAI 209
           A  +HA+GA+
Sbjct: 244 AVADHALGAL 253
to top
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 373
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H   C +
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184

Query: 374 A---MLGALGCVFP-----ELLARNGVKFGEAVW 451
           A   + G    V P     ++    G++ G+ +W
Sbjct: 185 AGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
to top
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 373
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H   C +
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 184

Query: 374 A---MLGALGCVFP-----ELLARNGVKFGEAVW 451
           A   + G    V P     ++    G++ G+ +W
Sbjct: 185 AGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
to top
>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 452

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 377 WPSGNGSPPAHGSWRRSPGQQR 312
           WP+ +G+P A GSW  SPG++R
Sbjct: 310 WPAPSGAPDA-GSWLPSPGRRR 330
to top
>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)|
          Length = 335

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFP----------GDYGWDTAGLSADPETFAKNREL 352
           P+YGP  VLY     G   S L  EFP          G  G +    S D   F+ +R  
Sbjct: 56  PYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRSC 110

Query: 353 EVIHCRWAMLGALGCV----FPELL 415
           E +H  +  L  L  V    FP++L
Sbjct: 111 ERLHTTYLDLVYLHDVEFVKFPDIL 135
to top
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)|
          Length = 1231

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 326  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 436
            ET +K R+++ I C   ++ +L  +F E++  NG  F
Sbjct: 902  ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
to top
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)|
          Length = 1231

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 326  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 436
            ET +K R+++ I C   ++ +L  +F E++  NG  F
Sbjct: 902  ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
to top
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)|
           (Lymphocyte antigen 64)
          Length = 573

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -2

Query: 414 SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS 274
           SSSG T P     +Q    +S +      SG A  P   Q  SPG+S
Sbjct: 27  SSSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSS 73
to top
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 370
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180
to top
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 370
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180
to top
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 370
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180
to top
>SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit (Sodium|
           channel protein type V alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.5) (Sodium channel
           protein, cardiac muscle alpha-subunit) (HH1)
          Length = 2016

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -1

Query: 418 SEQLGEDAAERA--EHGPAAMDHLQLTVLGEGL-RVSREPR 305
           +E+ GED   ++  E GP AM+HL LT    GL R S +PR
Sbjct: 486 TEECGEDRLPKSDSEDGPRAMNHLSLT---RGLSRTSMKPR 523
to top
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 254 PPSYLSGEFPGDYGWDTAGLSADPET 331
           P SY S    GD+GWD A   + P T
Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170
to top
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 370
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 180
to top
>YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicase in ATS1-TPD3|
           intergenic region (EC 3.6.1.-)
          Length = 1131

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -2

Query: 429 TPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSP 271
           +P + +SS   +P++P++      +  SRF  K S  +E    S+P  P  SP
Sbjct: 20  SPTKVASSSPLKPTSPTVPDASVASLRSRFTFKPSDPSEGAHTSKP-LPSGSP 71
to top
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 269 SGEFPGDYGWDTAGLSADPET--FAKNRELEVIHCRWAMLGALGCVFPELL 415
           SG F G   WD   L+A        + RE E+ H R AML ALG V  E L
Sbjct: 67  SGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
to top
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)|
           (Glutamate--ammonia ligase)
          Length = 403

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRW 373
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H   C +
Sbjct: 158 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLY 214

Query: 374 AMLGALGCVFPELLAR--------NGVKFGEAVW 451
           A +   G     + A+         G++ G+ +W
Sbjct: 215 AGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
to top
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 370
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 181
to top
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)|
          Length = 1425

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -2

Query: 450 QTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS- 274
           Q  +P      +S + + QP+ P  A     T++ R L + S   E+  +    SPG+S 
Sbjct: 237 QPPAPANQDQNSSQNARLQPTPPIQAPAPKPTAAPRPLDRESPGVENKLIPPVGSPGSST 296

Query: 273 PLR*LGGSPESGP 235
           PL   G  P S P
Sbjct: 297 PLPPDGTGPNSTP 309
to top
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101|
          Length = 621

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -2

Query: 447 TASPNLTP----LRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPG 280
           T +P +TP    +  +S     PSAP+M+ +   +S+S  +   S     PAVSQ    G
Sbjct: 403 TGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ--GFG 460

Query: 279 NSPLR*LGGSPESGPR 232
            S    LG S ES  R
Sbjct: 461 QSTTTTLGPSFESNER 476
to top
>TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)|
           (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl
           aminopeptidase) (Lysosomal pepstatin insensitive
           protease) (LPIC)
          Length = 563

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -2

Query: 447 TASPNLTPLRA-SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAV 301
           ++SP+L P    ++SG+  P   +++   W+ S+S  +  VSG++ S  V
Sbjct: 431 SSSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNSVPIPWVSGTSASTPV 480
to top
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed|
          Length = 552

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = -2

Query: 450 QTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSP 271
           Q A+P +T    SSS  +  S P  +    I+S+S  +A  S S+ S   S   S  +SP
Sbjct: 308 QPAAPTMTQPPLSSSASSLASPPPASNASTISSTSS-VATSSSSSSSGCSSAASSLNSSP 366

Query: 270 LR*LGGS 250
              LG S
Sbjct: 367 SSRLGAS 373
to top
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)|
          Length = 717

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 447 TASPNLTPLRASSSGKTQPSAPSMAQRQWITSSS 346
           +ASP+ +PL   SS  +  S+ S +Q  + TSSS
Sbjct: 490 SASPSYSPLSVDSSNVSSSSSSSSSQSSFTTSSS 523
to top
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2|
          Length = 925

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
 Frame = -2

Query: 450 QTASPNLTPLRASSSGKTQ--PSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 277
           + A+P   P   +++   Q  P AP+        +++R  A   G  + PA  QP  PG 
Sbjct: 103 EAAAPPAQPGGTATTPAAQATPEAPARPG----PAAARPSAPAPGQPKPPAPGQPPRPGA 158

Query: 276 SPLR*LGGSPESGPR*STRSGPYHGXXXXXXXXXXLRMVMRPPPR 142
           +P    G  P   P+ + R+ P  G           R + RP PR
Sbjct: 159 TP----GPRPGPAPKPAART-PRVGNNPFSSAQPVDRPIPRPVPR 198
to top
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 203 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 322
           PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 129 PWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,943,394
Number of Sequences: 219361
Number of extensions: 924040
Number of successful extensions: 3573
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 3362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3523
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top