>RBSK_BACSU (P36945) Ribokinase (EC 2.7.1.15)|
          Length = 293

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +2

Query: 287 NLIQDIEPLDLSVIQKDVPLETVD 358
           N ++ IE +D+ +IQ+++P ETVD
Sbjct: 123 NALEQIEKVDMVLIQQEIPEETVD 146

>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 455

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 66  AVGMWPSPAGGGRARSWLP 10
           A G WP P+G   AR WLP
Sbjct: 309 AEGSWPPPSGAPDARPWLP 327

>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 452

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 66  AVGMWPSPAGGGRARSWLP 10
           A G WP+P+G   A SWLP
Sbjct: 306 AEGSWPAPSGAPDAGSWLP 324

>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 454

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 66  AVGMWPSPAGGGRARSWLP 10
           A G WP+P+G   A SWLP
Sbjct: 308 AEGSWPAPSGSPDAGSWLP 326

>CARB_ARCFU (O28994) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1076

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 302 IEPLDLSVIQKDVPLETVDAMKRTISGMLGL 394
           IEPLD  ++ K +  ET DA+  T+ G   L
Sbjct: 66  IEPLDAEIVAKIIERETPDALLPTLGGQTAL 96

>GYRA_MYCXE (P72065) DNA gyrase subunit A (EC 5.99.1.3) [Contains: Mxe gyrA|
           intein] (Fragment)
          Length = 327

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 254 IDGASKKSTLWNLIQDIEPLDLSVIQK 334
           +D A   + LW LI +I+P D +VIQ+
Sbjct: 146 VDVAGVPTLLWKLIDEIKPGDYAVIQR 172

>GYRA_MYCMA (O33149) DNA gyrase subunit A (EC 5.99.1.3) [Contains: Mma gyrA|
           intein] (Fragment)
          Length = 473

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 254 IDGASKKSTLWNLIQDIEPLDLSVIQKDVPLE 349
           +D     + LW LI++I P D  V+Q+  P+E
Sbjct: 130 VDVGGVPTLLWKLIEEIRPDDHVVLQRTPPVE 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,805,685
Number of Sequences: 219361
Number of extensions: 539954
Number of successful extensions: 1560
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)