ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet22c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463125.1| Oryza sativa (japonica cultivar-group), mRNA 301 9e-79
2gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genom... 216 4e-53
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 216 4e-53
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 216 4e-53
5gb|AY107995.1| Zea mays PCO124424 mRNA sequence 157 3e-35
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
7dbj|AK111563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
9emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 111 2e-21
10ref|NM_127055.3| Arabidopsis thaliana unknown protein AT2G14910 ... 46 0.090
11ref|NM_201735.1| Arabidopsis thaliana unknown protein AT2G14910 ... 46 0.090
12gb|AC116533.11| Homo sapiens chromosome 11, clone RP11-466H18, c... 46 0.090
13gb|AY096503.1| Arabidopsis thaliana unknown protein (At2g14910) ... 46 0.090
14gb|AY063898.1| Arabidopsis thaliana unknown protein (At2g14910) ... 46 0.090
15gb|AC005396.3| Arabidopsis thaliana chromosome 2 clone T26I20 ma... 46 0.090
16gb|AY081268.1| Arabidopsis thaliana unknown protein (At2g14910) ... 46 0.090
17ref|XM_393897.2| PREDICTED: Apis mellifera similar to protein ty... 46 0.090
18emb|BX820992.1|CNS0A9MG Arabidopsis thaliana Full-length cDNA Co... 46 0.090
19emb|BX819343.1|CNS0A9QR Arabidopsis thaliana Full-length cDNA Co... 46 0.090
20emb|BX819440.1|CNS0A82V Arabidopsis thaliana Full-length cDNA Co... 46 0.090
21gb|BT013983.1| Lycopersicon esculentum clone 133028F, mRNA sequence 44 0.36
22gb|AC131745.4| Mus musculus BAC clone RP23-55L3 from chromosome ... 42 1.4
23ref|XM_533219.2| PREDICTED: Canis familiaris similar to Cathepsi... 42 1.4
24gb|AY128688.1| Rattus norvegicus PI 3-kinase enhancer long isofo... 42 1.4
25emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.4
26emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
27emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
28emb|AL645771.1|SCSCP2 Streptomyces coelicolor A3(2) plasmid SCP2 42 1.4
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
30gb|AF280816.1|AF280816 Rattus norvegicus nuclear GTPase PIKE mRN... 42 1.4
31ref|XM_576238.1| PREDICTED: Rattus norvegicus centaurin, gamma 1... 42 1.4
32emb|X90546.1|SCDNATRAA S.coelicolor plasmid DNA for traA gene 42 1.4
33emb|X72857.1|SCPSCP2 S.coelicolor plasmid SCP2 transfer region DNA 42 1.4
34gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
35ref|XM_746930.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.5
36gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.5
37gb|AC008667.10| Homo sapiens chromosome 5 clone CTB-35F21, compl... 40 5.5
38gb|AE005948.1| Caulobacter crescentus CB15 section 274 of 359 of... 40 5.5
39gb|AE005862.1| Caulobacter crescentus CB15 section 188 of 359 of... 40 5.5
40gb|AE005700.1| Caulobacter crescentus CB15 section 26 of 359 of ... 40 5.5
41gb|AC073848.4|AC073848 Homo sapiens BAC clone RP11-669M16 from 4... 40 5.5
42dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
43gb|AY833307.1| Cottus klamathensis polyporus ATPase 8 (ATP8) gen... 40 5.5
44gb|AY833306.1| Cottus klamathensis macrops ATPase 8 (ATP8) gene,... 40 5.5
45gb|AY833305.1| Cottus klamathensis klamathensis ATPase 8 (ATP8) ... 40 5.5
46dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.5
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.5
48gb|AC093496.2| Homo sapiens chromosome 3 clone RP11-536I6 map 3p... 40 5.5
49gb|AC090941.2| Homo sapiens chromosome 3 clone RP11-16L19 map 3p... 40 5.5
50gb|AC113361.3| Homo sapiens chromosome 5 clone CTD-3224K15, comp... 40 5.5
51gb|U62317.2|HUB384D8 Homo sapiens chromosome 22q13 BAC clone CIT... 40 5.5
52gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Can... 40 5.5
53dbj|AB046772.1| Homo sapiens mRNA for KIAA1552 protein, partial cds 40 5.5 
>ref|XM_463125.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1769

 Score =  301 bits (152), Expect = 9e-79
 Identities = 215/236 (91%)
 Strand = Plus / Plus

                                                                       
Query: 179 aggaggctcgccggggtcggggtggcggccgcctccgcctcgcccttcgacgagctctac 238
           ||||||||||||||||| ||||| | ||| || ||||| |||||||||||||||||||||
Sbjct: 273 aggaggctcgccggggtaggggtcgtggcggcgtccgcgtcgcccttcgacgagctctac 332

                                                                       
Query: 239 gcgcggggaaggcccatcgacggcgcctccaagaaatctaccctgtggaatttgatccaa 298
           |||||||| ||||||  | | ||| ||||||||||||||| ||| ||||| |||||||||
Sbjct: 333 gcgcgggggaggcccgcccatggctcctccaagaaatctatcctatggaacttgatccaa 392

                                                                       
Query: 299 gacatagagcctttggatcttagtgtcattcagaaagatgttcctcttgaaacggttgat 358
           |||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||
Sbjct: 393 gacatagagcctttggatctaagtgtcattcagaaagatgttcctcctgaaacagttgat 452

                                                                   
Query: 359 gcaatgaagaggaccatctctggcatgttgggcctacttccatccgatcagttccg 414
           |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 453 gcaatgaagaggactatctctggcatgttgggcctgcttccatcagatcagttccg 508



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 52  ccacatgccgaccgcctcctgcctccgcccgcc 84
           |||||||||||||||||||||||||||||||||
Sbjct: 119 ccacatgccgaccgcctcctgcctccgcccgcc 151
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>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete
             sequence
          Length = 157397

 Score =  216 bits (109), Expect = 4e-53
 Identities = 136/145 (93%)
 Strand = Plus / Minus

                                                                         
Query: 270   agaaatctaccctgtggaatttgatccaagacatagagcctttggatcttagtgtcattc 329
             ||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 30996 agaaatctatcctatggaacttgatccaagacatagagcctttggatctaagtgtcattc 30937

                                                                         
Query: 330   agaaagatgttcctcttgaaacggttgatgcaatgaagaggaccatctctggcatgttgg 389
             ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 30936 agaaagatgttcctcctgaaacagttgatgcaatgaagaggactatctctggcatgttgg 30877

                                      
Query: 390   gcctacttccatccgatcagttccg 414
             |||| |||||||| |||||||||||
Sbjct: 30876 gcctgcttccatcagatcagttccg 30852



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                         
Query: 179   aggaggctcgccggggtcggggtggcggccgcctccgcctcgcccttcgacgagctctac 238
             ||||||||||||||||| ||||| | ||| || ||||| |||||||||||||||||||||
Sbjct: 32573 aggaggctcgccggggtaggggtcgtggcggcgtccgcgtcgcccttcgacgagctctac 32514

                            
Query: 239   gcgcggggaaggccc 253
             |||||||| ||||||
Sbjct: 32513 gcgcgggggaggccc 32499



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                              
Query: 52    ccacatgccgaccgcctcctgcctccgcccgcc 84
             |||||||||||||||||||||||||||||||||
Sbjct: 32727 ccacatgccgaccgcctcctgcctccgcccgcc 32695
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  216 bits (109), Expect = 4e-53
 Identities = 136/145 (93%)
 Strand = Plus / Plus

                                                                            
Query: 270      agaaatctaccctgtggaatttgatccaagacatagagcctttggatcttagtgtcattc 329
                ||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 22637150 agaaatctatcctatggaacttgatccaagacatagagcctttggatctaagtgtcattc 22637209

                                                                            
Query: 330      agaaagatgttcctcttgaaacggttgatgcaatgaagaggaccatctctggcatgttgg 389
                ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 22637210 agaaagatgttcctcctgaaacagttgatgcaatgaagaggactatctctggcatgttgg 22637269

                                         
Query: 390      gcctacttccatccgatcagttccg 414
                |||| |||||||| |||||||||||
Sbjct: 22637270 gcctgcttccatcagatcagttccg 22637294



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                            
Query: 179      aggaggctcgccggggtcggggtggcggccgcctccgcctcgcccttcgacgagctctac 238
                ||||||||||||||||| ||||| | ||| || ||||| |||||||||||||||||||||
Sbjct: 22635573 aggaggctcgccggggtaggggtcgtggcggcgtccgcgtcgcccttcgacgagctctac 22635632

                               
Query: 239      gcgcggggaaggccc 253
                |||||||| ||||||
Sbjct: 22635633 gcgcgggggaggccc 22635647



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                                 
Query: 52       ccacatgccgaccgcctcctgcctccgcccgcc 84
                |||||||||||||||||||||||||||||||||
Sbjct: 22635419 ccacatgccgaccgcctcctgcctccgcccgcc 22635451
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  216 bits (109), Expect = 4e-53
 Identities = 136/145 (93%)
 Strand = Plus / Plus

                                                                            
Query: 270      agaaatctaccctgtggaatttgatccaagacatagagcctttggatcttagtgtcattc 329
                ||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 22630179 agaaatctatcctatggaacttgatccaagacatagagcctttggatctaagtgtcattc 22630238

                                                                            
Query: 330      agaaagatgttcctcttgaaacggttgatgcaatgaagaggaccatctctggcatgttgg 389
                ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 22630239 agaaagatgttcctcctgaaacagttgatgcaatgaagaggactatctctggcatgttgg 22630298

                                         
Query: 390      gcctacttccatccgatcagttccg 414
                |||| |||||||| |||||||||||
Sbjct: 22630299 gcctgcttccatcagatcagttccg 22630323



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                            
Query: 179      aggaggctcgccggggtcggggtggcggccgcctccgcctcgcccttcgacgagctctac 238
                ||||||||||||||||| ||||| | ||| || ||||| |||||||||||||||||||||
Sbjct: 22628602 aggaggctcgccggggtaggggtcgtggcggcgtccgcgtcgcccttcgacgagctctac 22628661

                               
Query: 239      gcgcggggaaggccc 253
                |||||||| ||||||
Sbjct: 22628662 gcgcgggggaggccc 22628676



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                                 
Query: 52       ccacatgccgaccgcctcctgcctccgcccgcc 84
                |||||||||||||||||||||||||||||||||
Sbjct: 22628448 ccacatgccgaccgcctcctgcctccgcccgcc 22628480
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>gb|AY107995.1| Zea mays PCO124424 mRNA sequence
          Length = 423

 Score =  157 bits (79), Expect = 3e-35
 Identities = 187/222 (84%), Gaps = 1/222 (0%)
 Strand = Plus / Plus

                                                                       
Query: 194 gtcggggtggcggccgcctccgcctcgcccttcgacgagctctacgcgcggggaaggccc 253
           |||||||||||| | || ||||| |||||||||||||||||  |||| ||||| ||||||
Sbjct: 13  gtcggggtggcgtctgcgtccgcgtcgcccttcgacgagctgcacgcacgggggaggccc 72

                                                                       
Query: 254 atcg-acggcgcctccaagaaatctaccctgtggaatttgatccaagacatagagccttt 312
            |   | ||  ||||||||||||| |  || ||||| |||||||| || |||||||| ||
Sbjct: 73  gtnacatggaccctccaagaaatccatgctctggaacttgatccaggatatagagccctt 132

                                                                       
Query: 313 ggatcttagtgtcattcagaaagatgttcctcttgaaacggttgatgcaatgaagaggac 372
           ||| || |||||||| |||||||||||| ||| |||||| || |||||||||||||||||
Sbjct: 133 ggacctaagtgtcatccagaaagatgttgctcctgaaacagtagatgcaatgaagaggac 192

                                                     
Query: 373 catctctggcatgttgggcctacttccatccgatcagttccg 414
            || |||||||||||||| || |||||||| |||||||||||
Sbjct: 193 tatttctggcatgttgggtcttcttccatctgatcagttccg 234
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  111 bits (56), Expect = 2e-21
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                            
Query: 274      atctaccctgtggaatttgatccaagacatagagcctttggatcttagtgtcattcagaa 333
                |||| |||| ||||| |||||  |||||||||| ||||||||||| ||  | || || ||
Sbjct: 24172454 atctgccctttggaacttgataaaagacatagaacctttggatctaagcataatccaaaa 24172513

                                                                            
Query: 334      agatgttcctcttgaaacggttgatgcaatgaagaggaccatctctggcatgttgggcct 393
                ||||||||||  |||||| || |||||||||||||||||  | || ||||||||||||||
Sbjct: 24172514 agatgttccttctgaaactgtggatgcaatgaagaggactgtttcaggcatgttgggcct 24172573

                                    
Query: 394      acttccatccgatcagttcc 413
                 |||||||||||||||||||
Sbjct: 24172574 tcttccatccgatcagttcc 24172593



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 172      ctggcggaggaggctcgccggggtcggggtggcggc 207
                |||||| ||| |||| ||||||||||||||||||||
Sbjct: 24171646 ctggcgaagggggcttgccggggtcggggtggcggc 24171681
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>dbj|AK111563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066M24, full
           insert sequence
          Length = 1789

 Score =  111 bits (56), Expect = 2e-21
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                       
Query: 274 atctaccctgtggaatttgatccaagacatagagcctttggatcttagtgtcattcagaa 333
           |||| |||| ||||| |||||  |||||||||| ||||||||||| ||  | || || ||
Sbjct: 360 atctgccctttggaacttgataaaagacatagaacctttggatctaagcataatccaaaa 419

                                                                       
Query: 334 agatgttcctcttgaaacggttgatgcaatgaagaggaccatctctggcatgttgggcct 393
           ||||||||||  |||||| || |||||||||||||||||  | || ||||||||||||||
Sbjct: 420 agatgttccttctgaaactgtggatgcaatgaagaggactgtttcaggcatgttgggcct 479

                               
Query: 394 acttccatccgatcagttcc 413
            |||||||||||||||||||
Sbjct: 480 tcttccatccgatcagttcc 499



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 172 ctggcggaggaggctcgccggggtcggggtggcggc 207
           |||||| ||| |||| ||||||||||||||||||||
Sbjct: 246 ctggcgaagggggcttgccggggtcggggtggcggc 281
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  111 bits (56), Expect = 2e-21
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                            
Query: 274      atctaccctgtggaatttgatccaagacatagagcctttggatcttagtgtcattcagaa 333
                |||| |||| ||||| |||||  |||||||||| ||||||||||| ||  | || || ||
Sbjct: 24100660 atctgccctttggaacttgataaaagacatagaacctttggatctaagcataatccaaaa 24100719

                                                                            
Query: 334      agatgttcctcttgaaacggttgatgcaatgaagaggaccatctctggcatgttgggcct 393
                ||||||||||  |||||| || |||||||||||||||||  | || ||||||||||||||
Sbjct: 24100720 agatgttccttctgaaactgtggatgcaatgaagaggactgtttcaggcatgttgggcct 24100779

                                    
Query: 394      acttccatccgatcagttcc 413
                 |||||||||||||||||||
Sbjct: 24100780 tcttccatccgatcagttcc 24100799



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 172      ctggcggaggaggctcgccggggtcggggtggcggc 207
                |||||| ||| |||| ||||||||||||||||||||
Sbjct: 24099852 ctggcgaagggggcttgccggggtcggggtggcggc 24099887
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>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132733

 Score =  111 bits (56), Expect = 2e-21
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 274   atctaccctgtggaatttgatccaagacatagagcctttggatcttagtgtcattcagaa 333
             |||| |||| ||||| |||||  |||||||||| ||||||||||| ||  | || || ||
Sbjct: 57145 atctgccctttggaacttgataaaagacatagaacctttggatctaagcataatccaaaa 57204

                                                                         
Query: 334   agatgttcctcttgaaacggttgatgcaatgaagaggaccatctctggcatgttgggcct 393
             ||||||||||  |||||| || |||||||||||||||||  | || ||||||||||||||
Sbjct: 57205 agatgttccttctgaaactgtggatgcaatgaagaggactgtttcaggcatgttgggcct 57264

                                 
Query: 394   acttccatccgatcagttcc 413
              |||||||||||||||||||
Sbjct: 57265 tcttccatccgatcagttcc 57284



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 172   ctggcggaggaggctcgccggggtcggggtggcggc 207
             |||||| ||| |||| ||||||||||||||||||||
Sbjct: 56337 ctggcgaagggggcttgccggggtcggggtggcggc 56372
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>ref|NM_127055.3| Arabidopsis thaliana unknown protein AT2G14910 transcript variant
           AT2G14910.1 mRNA, complete cds
          Length = 1779

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 453 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 499
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>ref|NM_201735.1| Arabidopsis thaliana unknown protein AT2G14910 transcript variant
           AT2G14910.2 mRNA, complete cds
          Length = 1957

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 453 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 499
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>gb|AC116533.11| Homo sapiens chromosome 11, clone RP11-466H18, complete sequence
          Length = 189143

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 24     gcgcgcgccccccacccgccggc 46
              |||||||||||||||||||||||
Sbjct: 141907 gcgcgcgccccccacccgccggc 141885
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>gb|AY096503.1| Arabidopsis thaliana unknown protein (At2g14910) mRNA, complete cds
          Length = 1192

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 316 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 362
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>gb|AY063898.1| Arabidopsis thaliana unknown protein (At2g14910) mRNA, complete cds
          Length = 1562

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 398 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 444
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>gb|AC005396.3| Arabidopsis thaliana chromosome 2 clone T26I20 map mi398, complete
             sequence
          Length = 85214

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 356   gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
             ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 29192 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 29146
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>gb|AY081268.1| Arabidopsis thaliana unknown protein (At2g14910) mRNA, complete cds
          Length = 1476

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 346 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 392
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>ref|XM_393897.2| PREDICTED: Apis mellifera similar to protein tyrosine phosphatase
           (LOC410417), mRNA
          Length = 7131

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 70  ctgcctccgcccgcctccccgca 92
           |||||||||||||||||||||||
Sbjct: 224 ctgcctccgcccgcctccccgca 202
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>emb|BX820992.1|CNS0A9MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH89ZH04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1491

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 381 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 427
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>emb|BX819343.1|CNS0A9QR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZB06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1377

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 251 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 297
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>emb|BX819440.1|CNS0A82V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB78ZA05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1659

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 356 gatgcaatgaagaggaccatctctggcatgttgggcctacttccatc 402
           ||||||||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 400 gatgcaatgaaaagaacaatctcaggcatgttgggtcttcttccatc 446
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>gb|BT013983.1| Lycopersicon esculentum clone 133028F, mRNA sequence
          Length = 1677

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 354 ttgatgcaatgaagaggaccatctctggcatgttgggcctacttccatccgatcagtt 411
           ||||||||||||| || || || || |||||||||||| | |||||||| || |||||
Sbjct: 391 ttgatgcaatgaaaagaactatatcaggcatgttgggcttgcttccatcagaccagtt 448
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>gb|AC131745.4| Mus musculus BAC clone RP23-55L3 from chromosome 14, complete sequence
          Length = 240647

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   ccctcccccgcctcccccggc 138
             |||||||||||||||||||||
Sbjct: 79221 ccctcccccgcctcccccggc 79201
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>ref|XM_533219.2| PREDICTED: Canis familiaris similar to Cathepsin F precursor
           (CATSF) (LOC476010), mRNA
          Length = 1818

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 76  ccgcccgcctccccgcagctccgccgcgg 104
           ||||||||||||||||||| | |||||||
Sbjct: 124 ccgcccgcctccccgcagcccggccgcgg 96
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>gb|AY128688.1| Rattus norvegicus PI 3-kinase enhancer long isoform mRNA, partial
           cds
          Length = 3558

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 ttgggagctggcggaggaggc 185
           |||||||||||||||||||||
Sbjct: 563 ttgggagctggcggaggaggc 543
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>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    ggcggccgcctccgcctcgcc 222
              |||||||||||||||||||||
Sbjct: 193510 ggcggccgcctccgcctcgcc 193490
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>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11,
             complete sequence
          Length = 143582

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   gcggccgcctccgcctcgccc 223
             |||||||||||||||||||||
Sbjct: 92517 gcggccgcctccgcctcgccc 92537



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   gcggccgcctccgcctcgccc 223
             |||||||||||||||||||||
Sbjct: 92314 gcggccgcctccgcctcgccc 92334



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   gcggccgcctccgcctcgccc 223
             |||||||||||||||||||||
Sbjct: 92155 gcggccgcctccgcctcgccc 92175
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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
             complete sequence
          Length = 164577

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   gcggccgcctccgcctcgccc 223
             |||||||||||||||||||||
Sbjct: 35137 gcggccgcctccgcctcgccc 35157



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   gcggccgcctccgcctcgccc 223
             |||||||||||||||||||||
Sbjct: 34934 gcggccgcctccgcctcgccc 34954



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   gcggccgcctccgcctcgccc 223
             |||||||||||||||||||||
Sbjct: 34775 gcggccgcctccgcctcgccc 34795
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>emb|AL645771.1|SCSCP2 Streptomyces coelicolor A3(2) plasmid SCP2
          Length = 31317

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   gggtggcggccgcctccgcct 218
             |||||||||||||||||||||
Sbjct: 17920 gggtggcggccgcctccgcct 17940
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 203      gcggccgcctccgcctcgccc 223
                |||||||||||||||||||||
Sbjct: 25308578 gcggccgcctccgcctcgccc 25308598



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 203      gcggccgcctccgcctcgccc 223
                |||||||||||||||||||||
Sbjct: 25308375 gcggccgcctccgcctcgccc 25308395



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 203      gcggccgcctccgcctcgccc 223
                |||||||||||||||||||||
Sbjct: 25308216 gcggccgcctccgcctcgccc 25308236
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>gb|AF280816.1|AF280816 Rattus norvegicus nuclear GTPase PIKE mRNA, complete cds
          Length = 2262

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 ttgggagctggcggaggaggc 185
           |||||||||||||||||||||
Sbjct: 563 ttgggagctggcggaggaggc 543
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>ref|XM_576238.1| PREDICTED: Rattus norvegicus centaurin, gamma 1 (Centg1), mRNA
          Length = 3741

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 ttgggagctggcggaggaggc 185
           |||||||||||||||||||||
Sbjct: 743 ttgggagctggcggaggaggc 723
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>emb|X90546.1|SCDNATRAA S.coelicolor plasmid DNA for traA gene
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 gggtggcggccgcctccgcct 218
           |||||||||||||||||||||
Sbjct: 460 gggtggcggccgcctccgcct 440
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>emb|X72857.1|SCPSCP2 S.coelicolor plasmid SCP2 transfer region DNA
          Length = 3267

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 198  gggtggcggccgcctccgcct 218
            |||||||||||||||||||||
Sbjct: 1935 gggtggcggccgcctccgcct 1915
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
              complete sequence
          Length = 149870

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gccggggtcggggtggcggc 207
              ||||||||||||||||||||
Sbjct: 100748 gccggggtcggggtggcggc 100767
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>ref|XM_746930.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g08030)
           partial mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 117 tccctcccccgcctcccccggcgc 140
           ||||||||||||||||||| ||||
Sbjct: 236 tccctcccccgcctccccctgcgc 259
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 90      gcagctccgccgcggcgcgc 109
               ||||||||||||||||||||
Sbjct: 1355368 gcagctccgccgcggcgcgc 1355349
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>gb|AC008667.10| Homo sapiens chromosome 5 clone CTB-35F21, complete sequence
          Length = 189049

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 117  tccctcccccgcctcccccg 136
            ||||||||||||||||||||
Sbjct: 6265 tccctcccccgcctcccccg 6246
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>gb|AE005948.1| Caulobacter crescentus CB15 section 274 of 359 of the complete genome
          Length = 13101

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  cctcgcccttcgacgagctc 235
            ||||||||||||||||||||
Sbjct: 1714 cctcgcccttcgacgagctc 1733
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>gb|AE005862.1| Caulobacter crescentus CB15 section 188 of 359 of the complete
           genome
          Length = 10016

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 cctcgcccttcgacgagctc 235
           ||||||||||||||||||||
Sbjct: 69  cctcgcccttcgacgagctc 50
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>gb|AE005700.1| Caulobacter crescentus CB15 section 26 of 359 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 212  tccgcctcgcccttcgacgagctc 235
            |||||||||||||||||| |||||
Sbjct: 6737 tccgcctcgcccttcgacaagctc 6714
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>gb|AC073848.4|AC073848 Homo sapiens BAC clone RP11-669M16 from 4, complete sequence
          Length = 163636

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    atgttcctcttgaaacggtt 355
              ||||||||||||||||||||
Sbjct: 113725 atgttcctcttgaaacggtt 113706
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      gccggggtcggggtggcggc 207
                ||||||||||||||||||||
Sbjct: 20102423 gccggggtcggggtggcggc 20102442
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>gb|AY833307.1| Cottus klamathensis polyporus ATPase 8 (ATP8) gene, complete cds;
           and ATPase 6 (ATP6) gene, partial cds; mitochondrial
          Length = 841

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 catgttgggcctacttccat 401
           ||||||||||||||||||||
Sbjct: 410 catgttgggcctacttccat 429
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>gb|AY833306.1| Cottus klamathensis macrops ATPase 8 (ATP8) gene, complete cds; and
           ATPase 6 (ATP6) gene, partial cds; mitochondrial
          Length = 841

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 catgttgggcctacttccat 401
           ||||||||||||||||||||
Sbjct: 410 catgttgggcctacttccat 429
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>gb|AY833305.1| Cottus klamathensis klamathensis ATPase 8 (ATP8) gene, complete
           cds; and ATPase 6 (ATP6) gene, partial cds;
           mitochondrial
          Length = 841

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 catgttgggcctacttccat 401
           ||||||||||||||||||||
Sbjct: 410 catgttgggcctacttccat 429
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     cccttcgacgagctctacgc 240
               ||||||||||||||||||||
Sbjct: 2671080 cccttcgacgagctctacgc 2671061
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 90      gcagctccgccgcggcgcgc 109
               ||||||||||||||||||||
Sbjct: 2323662 gcagctccgccgcggcgcgc 2323643
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>gb|AC093496.2| Homo sapiens chromosome 3 clone RP11-536I6 map 3p, complete sequence
          Length = 184041

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   cggcggggctggcgattggg 169
             ||||||||||||||||||||
Sbjct: 96132 cggcggggctggcgattggg 96151
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>gb|AC090941.2| Homo sapiens chromosome 3 clone RP11-16L19 map 3p, complete sequence
          Length = 187159

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    cggcggggctggcgattggg 169
              ||||||||||||||||||||
Sbjct: 180313 cggcggggctggcgattggg 180332
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>gb|AC113361.3| Homo sapiens chromosome 5 clone CTD-3224K15, complete sequence
          Length = 92323

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tccctcccccgcctcccccg 136
           ||||||||||||||||||||
Sbjct: 283 tccctcccccgcctcccccg 302
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>gb|U62317.2|HUB384D8 Homo sapiens chromosome 22q13 BAC clone CIT987SK-384D8 complete
             sequence
          Length = 139934

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   tccctcccccgcctcccccg 136
             ||||||||||||||||||||
Sbjct: 39810 tccctcccccgcctcccccg 39791
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>gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 182105

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tcattcagaaagatgttcct 343
             ||||||||||||||||||||
Sbjct: 56433 tcattcagaaagatgttcct 56414
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>dbj|AB046772.1| Homo sapiens mRNA for KIAA1552 protein, partial cds
          Length = 4963

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 gccggggtcggggtggcggc 207
           ||||||||||||||||||||
Sbjct: 36  gccggggtcggggtggcggc 55


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,380,983
Number of Sequences: 3902068
Number of extensions: 3380983
Number of successful extensions: 83718
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82550
Number of HSP's gapped (non-prelim): 1168
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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