ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet22b09 |
|---|---|
| Clone Library Name | barley_pub |
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 36.2 bits (82), Expect = 0.040 Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 2/127 (1%) Frame = +3 Query: 48 GRSESLPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSELA- 224 G S P GP Q S LPPK SP + + ++ AK + LR+SE + Sbjct: 545 GASPLKQKGPQGPGQPSGS-------LPPKASPQAAKASPQA-AKASPQAKPLRASEPSK 596 Query: 225 -TLAAIFHFSGTKPSYLGVQKSPPSLALCPATNNCVSTAERISDSNHYAPPWNYNPKDGP 401 + +A +G V K PP A+ P T S +R + P PK G Sbjct: 597 TSSSAPEKKTGIPVKAEPVPKPPPETAVPPGTPKAKSGVKRTDPATPVVKPVPEAPKSGE 656 Query: 402 RGKPISK 422 +P+ K Sbjct: 657 AEEPVPK 663
>SEM4D_HUMAN (Q92854) Semaphorin-4D precursor (Leukocyte activation antigen| CD100) (BB18) (A8) (GR3) Length = 862 Score = 32.7 bits (73), Expect = 0.45 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +3 Query: 69 SPPTGPEQTMNSSAVTCCCLPPKPSPGG----PRLNNKSNAKI-GRRDLVLRSSELATLA 233 SPPT Q +S A+T LPPKP+P G P++ + ++ + + L+SS+ L Sbjct: 681 SPPTPAVQATSSGAIT---LPPKPAPTGTSCEPKIVINTVPQLHSEKTMYLKSSDNRLLM 737 Query: 234 AIFHF 248 ++F F Sbjct: 738 SLFLF 742
>LY75_MESAU (Q920P9) Lymphocyte antigen 75 precursor (DEC-205) (CD205 antigen)| Length = 1722 Score = 32.3 bits (72), Expect = 0.58 Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 2/105 (1%) Frame = -1 Query: 431 GLIFAYGFTPRTILGIVIPWGSVVIGIADPLGRGHAVVCRRAQCKGWRALLHAKVARLGA 252 GL A F+ L P G V + LGR CR +RAL K G Sbjct: 576 GLKQAMTFSNWNFLQPASPGGCVAMSTGKTLGRWEVKSCR-----SFRALSICKKMS-GP 629 Query: 251 AEVEDGGERGELAAPE--HQVPSSYFCVALVVKARATRRGFWWEA 123 E E+ + + PE H PS+ C + R RR W EA Sbjct: 630 QEPEEATPKPDEPCPEGWHTFPSNLSCYKVFHIERTVRRRTWEEA 674
>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1006 Score = 32.0 bits (71), Expect = 0.76 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 63 LPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKS 173 LP PP P ++ + S C+PP P PRL +S Sbjct: 341 LPKPPRSPSRSPSHSPNRSPCVPPAPDMALPRLGTQS 377
>TIEG3_MOUSE (Q8K1S5) Transforming growth factor-beta-inducible early growth| response protein 3 (TGFB-inducible early growth response protein 3) (TIEG-3) (TGFB-inducible early growth response protein 2b) Length = 502 Score = 31.6 bits (70), Expect = 0.99 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = +3 Query: 51 RSESLPSPPTG---PEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSEL 221 +S L P TG P Q +NS LPP P+ GGPR +K + SS Sbjct: 104 QSPELTEPSTGTPVPSQVVNSKGCMVTALPPSPA-GGPRTLSKREP----LEPASGSSCR 158 Query: 222 ATLAAIFHFSGTKPS 266 A + ++ +G P+ Sbjct: 159 AVMTSVIRHTGESPA 173
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 31.6 bits (70), Expect = 0.99 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 Query: 69 SPPTGPEQTMNSSAVTCCCLPPKPSPGGP 155 SPP+ P SS+ +CCCL K P P Sbjct: 554 SPPSKPRILPQSSSSSCCCLTKKKQPQDP 582
>ODO2_BARQU (Q6FYD4) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) Length = 410 Score = 31.2 bits (69), Expect = 1.3 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = +3 Query: 60 SLPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRL-NNKSNAKI---GRRDLVLRSSELAT 227 S+P P+ EQ+ +SSA +PP PS NN + + I G+R +L+ L Sbjct: 93 SIPEAPSELEQSPSSSATPSGTMPPAPSAAKLMAENNIAKSDISGSGKRGQILKEDVLGA 152 Query: 228 LAAIFHFSGTKPS 266 LA GTK S Sbjct: 153 LA-----QGTKAS 160
>MP2K3_HUMAN (P46734) Dual specificity mitogen-activated protein kinase kinase 3| (EC 2.7.12.2) (MAP kinase kinase 3) (MAPKK 3) (MAPK/ERK kinase 3) Length = 347 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 81 GPEQTMNSSAVTCCCLPPKPSPGGPR-LNNKSNAKIGRRDLVLRSSELATLAAI 239 G + ++C PP P+P PR L++++ IG R+ + + +L T++ + Sbjct: 17 GKSKRKKDLRISCMSKPPAPNPTPPRNLDSRTFITIGDRNFEVEADDLVTISEL 70
>FLP1_SCHPO (Q9P7H1) Tyrosine-protein phosphatase CDC14 homolog (EC 3.1.3.48)| (CDC fourteen-like phosphatase 1) Length = 537 Score = 30.0 bits (66), Expect = 2.9 Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 11/134 (8%) Frame = +3 Query: 54 SESLPSPPTGPEQTMNSSAVTCCCLP-PKPSPGGPRLNNKSNAKIGRR----DLVLRSSE 218 +E L +PP P N ++ + P P+P+PG PR + N RR V + + Sbjct: 358 AEPLATPPRHPLNATNGTSQSNISTPLPEPTPGQPRKVSGHNPPSARRLPSASSVKFNEK 417 Query: 219 LATLAAIFHFSGTKPSYLGVQKS------PPSLALCPATNNCVSTAERISDSNHYAPPWN 380 L + + K SY + S P V R S ++ P Sbjct: 418 LKNASKQSIQNENKASYSSYEDSEIQNDDETRTVGTPTETISVVRLRRSSSQSNIEPNGV 477 Query: 381 YNPKDGPRGKPISK 422 +P P G PI + Sbjct: 478 RSPTSSPTGSPIRR 491
>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (mNIFK) Length = 317 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +3 Query: 273 GVQKSPPSLALCPATNNCVSTAERISDSNHYAPPWNYNPKDGPRGKPISKDEAMKE 440 G+ S PSL L N ++ A R S+ N P + K+G G+P K++ MKE Sbjct: 182 GIDYSFPSLVLPKPKN--IAVAHRDSEGNQVLP----DQKEGLSGEPRRKEKMMKE 231
>RUVA_STRAW (Q820F4) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 203 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = -1 Query: 353 IADPLGRGHAVVCRRAQCKGWRALLHAKVARLGAAEVEDGGERGELAAPEHQVPSSYFCV 174 + +PLG G + RA GWR LHA + LG A + E AP+ + V Sbjct: 131 LGEPLGTGGPAI-GRAVTTGWREQLHAALIGLGYA-TREADEAVAAVAPQAEAAGGTPQV 188 Query: 173 ALVVKA 156 ++KA Sbjct: 189 GQLLKA 194
>ATKB_XANCP (Q8PCM1) Potassium-transporting ATPase B chain (EC 3.6.3.12)| (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) Length = 682 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -1 Query: 416 YGFTPRTILGIVIPWGSVVIGIADPLGRGHAVVCRRAQ----CKGWRALLHAKVARLGAA 249 +G+ IL + + +G+ IA+ GRG A RRA+ + L + R+ AA Sbjct: 68 FGWAVTAILFVTVLFGNFAEAIAEARGRGQAASLRRARKDLVARRVETALGGRETRVPAA 127 Query: 248 EVEDG 234 E+ G Sbjct: 128 ELRPG 132
>ATKB_XANAC (Q8PPC9) Potassium-transporting ATPase B chain (EC 3.6.3.12)| (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) Length = 682 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -1 Query: 416 YGFTPRTILGIVIPWGSVVIGIADPLGRGHAVVCRRAQ----CKGWRALLHAKVARLGAA 249 +G+ IL + + +G+ IA+ GRG A RRA+ + L + R+ AA Sbjct: 68 FGWAVTAILFVTVLFGNFAEAIAEARGRGQAASLRRARKDLVARRVETALGGRETRVPAA 127 Query: 248 EVEDG 234 E+ G Sbjct: 128 ELRPG 132
>OAR2_LOCMI (Q25322) Putative tyramine receptor 2 (Tyr-Loc2)| Length = 484 Score = 29.6 bits (65), Expect = 3.8 Identities = 30/129 (23%), Positives = 44/129 (34%), Gaps = 13/129 (10%) Frame = +3 Query: 54 SESLPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSELATLA 233 ++++PS +Q SS LPP P+P K+ K ++D A Sbjct: 261 AQAVPSSVPSHDQESVSSETNHNELPPPPAPPSKEKRRKTKKKSKKKDQAAEEGRFLAPA 320 Query: 234 AIFHFSGTKPSYLGVQKSPPSLA----LCPATNNCVSTAERISDS---------NHYAPP 374 + S T S + LA C T +T ++DS APP Sbjct: 321 MVAEDSVTDNSVSVGPVAKNHLAEDGYTCTTTTTTTTTTTAVTDSPRSRTASQKGSTAPP 380 Query: 375 WNYNPKDGP 401 PK P Sbjct: 381 TPVQPKSIP 389
>COAT_BYDVP (P09510) Coat protein| Length = 200 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +3 Query: 135 KPSPGGPRLNNKSNAKIGRRDLVLRSSELATLAAIFHFSGTKPSYLGVQKSPPSLALCPA 314 +P+ GPR N G + V R + T +F K + G K PSL+ CPA Sbjct: 32 QPNRAGPRRRNGRRKGRGGANFVFRPTG-GTEVFVFSVDNLKANSSGAIKFGPSLSQCPA 90 Query: 315 TNN 323 ++ Sbjct: 91 LSD 93
>LDLR_MOUSE (P35951) Low-density lipoprotein receptor precursor (LDL receptor)| Length = 864 Score = 29.3 bits (64), Expect = 4.9 Identities = 25/99 (25%), Positives = 38/99 (38%) Frame = +3 Query: 63 LPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSELATLAAIF 242 LP+P GP +S TC C P G L + + D VL + + + + Sbjct: 683 LPAPQIGP----HSPKFTCAC------PDGMLLAKDMRSCLTEVDTVLTTQGTSAVRPVV 732 Query: 243 HFSGTKPSYLGVQKSPPSLALCPATNNCVSTAERISDSN 359 S T+P S PS P +ST ++ S+ Sbjct: 733 TASATRPPKHSEDLSAPSTPRQPVDTPGLSTVASVTVSH 771
>NFI_PYRFU (Q8U263) Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)| (Deoxyribonuclease V) (DNase V) Length = 191 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 255 TKPSYLGVQKSPPSLALCPATNNCVSTAERISDSNHYAPPWNYNPKDGPRGKPISKD 425 +K +Y+ V K+ S+ N+ V E++ D N Y P N K RG+ K+ Sbjct: 135 SKDTYVKVGKAFVSVGNLITLNDAVRIVEKLLDENGYPKPLNIADKLSKRGESREKE 191
>NAP5_HUMAN (O14513) Nck-associated protein 5 (NAP-5) (Fragment)| Length = 416 Score = 29.3 bits (64), Expect = 4.9 Identities = 22/86 (25%), Positives = 39/86 (45%) Frame = +3 Query: 45 GGRSESLPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSELA 224 G R E +PSPP P ++++ A PP PS + + N+K + +L+ Sbjct: 261 GARGE-IPSPPQSPGRSVSLLARPSYDYPPAPSSTKSKPGSPVNSKDPFKSPLLKGISAP 319 Query: 225 TLAAIFHFSGTKPSYLGVQKSPPSLA 302 ++ + P+ VQ+ PS+A Sbjct: 320 VIS-------SNPATTEVQRKKPSVA 338
>OMLA_ACTPL (Q02937) Outer membrane lipoprotein A precursor| Length = 365 Score = 28.9 bits (63), Expect = 6.4 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = +3 Query: 342 RISDSNHYAPPWNYNPKDGPRGKPISKDEAMKELIE 449 +++D AP + KD P+G+ +SKD++ E+++ Sbjct: 92 KLNDPQVMAPKMDNPQKDAPKGEELSKDKSNAEILK 127
>AFF2_PONPY (Q7YQM1) AF4/FMR2 family member 2 (Fragile X mental retardation| protein 2 homolog) (Protein FMR-2) Length = 1272 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/118 (22%), Positives = 41/118 (34%) Frame = +3 Query: 66 PSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSELATLAAIFH 245 P+ P E T KP+P G R + + + R E T+ + Sbjct: 784 PAKPDHKETATKPKRQTAVTAVEKPAPKGKRKHKPTEVAEKIPEKKQRLEEATTICLL-- 841 Query: 246 FSGTKPSYLGVQKSPPSLALCPATNNCVSTAERISDSNHYAPPWNYNPKDGPRGKPIS 419 P + +PP NN A R + + PP + P+D PR + +S Sbjct: 842 ----PPC---ISPAPPHKPPNTRENNSSRRANRRKEEKLFPPPLSPLPEDPPRRRNVS 892
>AFF2_PANTR (Q7YQM2) AF4/FMR2 family member 2 (Fragile X mental retardation| protein 2 homolog) (Protein FMR-2) Length = 1272 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/118 (22%), Positives = 41/118 (34%) Frame = +3 Query: 66 PSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSELATLAAIFH 245 P+ P E T KP+P G R + + + R E T+ + Sbjct: 784 PAKPDHKETATKPKRQTALTAVEKPAPKGKRKHKPTEVAEKIPEKKQRLEEATTICLL-- 841 Query: 246 FSGTKPSYLGVQKSPPSLALCPATNNCVSTAERISDSNHYAPPWNYNPKDGPRGKPIS 419 P + +PP NN A R + + PP + P+D PR + +S Sbjct: 842 ----PPC---ISPAPPHKPPNTRENNSSRRANRRKEEKLFPPPLSPLPEDPPRRRNVS 892
>OCLN_CANFA (Q28269) Occludin| Length = 521 Score = 28.9 bits (63), Expect = 6.4 Identities = 36/118 (30%), Positives = 46/118 (38%), Gaps = 4/118 (3%) Frame = +3 Query: 72 PPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNN----KSNAKIGRRDLVLRSSELATLAAI 239 PP E N SA T +PP PS R+++ SN K+ + L SS +T Sbjct: 290 PPNVEEWVKNVSAGTQD-MPPPPSDYVERVDSPMAYSSNGKVNDKRLYPESSYKST---- 344 Query: 240 FHFSGTKPSYLGVQKSPPSLALCPATNNCVSTAERISDSNHYAPPWNYNPKDGPRGKP 413 P VQ+ P A PA + R S S H PP P G G+P Sbjct: 345 -------PVPEVVQELP---ATSPADD---FRQPRYSSSGHLEPPSKRAPSKGRTGRP 389
>Y196_STRP8 (Q8P2R7) Hypothetical protein spyM18_0196| Length = 159 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -1 Query: 380 IPWGSVVIGIADPLGRGHAVVCRRAQCKGWRALLHAKVARLGAAEVEDGGER 225 IP G V++ + +GRGH A+ + +A++HA++ + A +G R Sbjct: 28 IPIGCVIVKDGEIIGRGH-----NAREESNQAIMHAEMMAINEANAHEGNWR 74
>PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-binding protein| (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TRIP-2) (p53 regulator Length = 1581 Score = 28.5 bits (62), Expect = 8.4 Identities = 24/93 (25%), Positives = 39/93 (41%) Frame = +3 Query: 60 SLPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDLVLRSSELATLAAI 239 SL P P + P KP PG P ++K+ + I S ++ + + Sbjct: 1185 SLSKPNISPSHSRPPGGSDKLASPMKPVPGTPP-SSKAKSPISSGSGGSHMSGTSSSSGM 1243 Query: 240 FHFSGTKPSYLGVQKSPPSLALCPATNNCVSTA 338 SG S QK+PPS C A+++ S++ Sbjct: 1244 KSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSS 1276
>Y214_STRP6 (Q5XE14) Hypothetical protein M6_Spy0214| Length = 171 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -1 Query: 380 IPWGSVVIGIADPLGRGHAVVCRRAQCKGWRALLHAKVARLGAAEVEDGGER 225 IP G V++ + +GRGH A+ + +A++HA++ + A +G R Sbjct: 28 IPIGCVIVKDGEIIGRGH-----NAREESNQAIMHAEMMAINEANAHEGNWR 74
>Y209_STRP1 (P68999) Hypothetical protein SPy0209/M5005_Spy0179| Length = 171 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -1 Query: 380 IPWGSVVIGIADPLGRGHAVVCRRAQCKGWRALLHAKVARLGAAEVEDGGER 225 IP G V++ + +GRGH A+ + +A++HA++ + A +G R Sbjct: 28 IPIGCVIVKDGEIIGRGH-----NAREESNQAIMHAEMMAINEANAHEGNWR 74
>Y153_STRP3 (Q8K8Q9) Hypothetical protein SpyM3_0153/SPs0158| Length = 171 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -1 Query: 380 IPWGSVVIGIADPLGRGHAVVCRRAQCKGWRALLHAKVARLGAAEVEDGGER 225 IP G V++ + +GRGH A+ + +A++HA++ + A +G R Sbjct: 28 IPIGCVIVKDGEIIGRGH-----NAREESNQAIMHAEMMAINEANAHEGNWR 74
>DAAM2_HUMAN (Q86T65) Disheveled-associated activator of morphogenesis 2| Length = 1068 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 15/47 (31%) Frame = +3 Query: 60 SLPSPPTGPEQTMNSSAVT------------CCCLPPKP---SPGGP 155 S P PP GP T++SS T CC PP P PGGP Sbjct: 520 SSPPPPGGP-LTLSSSMTTNDLPPPPPPLPFACCPPPPPPPLPPGGP 565
>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase) Length = 1001 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 63 LPSPPTGPEQTMNSSAVTCCCLPPKPSPGGPR 158 LP PP P ++ + S C+PP P PR Sbjct: 342 LPKPPRSPSRSPSRSPNRSPCVPPAPEVALPR 373
>BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor (BCCP) Length = 262 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/55 (27%), Positives = 24/55 (43%) Frame = +3 Query: 258 KPSYLGVQKSPPSLALCPATNNCVSTAERISDSNHYAPPWNYNPKDGPRGKPISK 422 KP+ L P + LC ++ S SN +PP K+ P KP+++ Sbjct: 26 KPNNLRFATKPGNTLLCTRVKAQLNEVALDSSSNATSPPMKAKSKEEPPAKPLAE 80
>PHNC_ALCFA (Q6WB63) Phosphonates import ATP-binding protein phnC (EC 3.6.3.28)| Length = 276 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +3 Query: 81 GPEQTMNSSAVTCCCLPPKPSPGGPRLNNKSNAKIGRRDL 200 GP S+ + C +PS G LN K A +GR DL Sbjct: 35 GPSGAGKSTLIRCVNRLVEPSEGRVLLNGKDLANLGRHDL 74
>COAT_BYDVR (Q00011) Coat protein| Length = 200 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +3 Query: 135 KPSPGGPRLNNKSNAKIGRRDLVLRSSELATLAAIFHFSGTKPSYLGVQKSPPSLALCPA 314 +P+ GPR N G + V R + T +F K + G K PSL+ CPA Sbjct: 32 QPNRAGPRRRNGRRKGRGGANPVFRPTG-GTEVFVFSVDNLKANSSGAIKFGPSLSQCPA 90 Query: 315 TNN 323 ++ Sbjct: 91 LSD 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,598,931 Number of Sequences: 219361 Number of extensions: 1272493 Number of successful extensions: 5672 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 5285 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5653 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
