>SALL4_HUMAN (Q9UJQ4) Sal-like protein 4 (Zinc finger protein SALL4)|
          Length = 1053

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -1

Query: 178 GKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGF-GAGTPEPSPQS 38
           G  P    PGPSP               N P A GF G+GTPEP  ++
Sbjct: 501 GSLPGDLQPGPSPESEGGPTLPGVGPNYNSPRAGGFQGSGTPEPGSET 548

>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 182 LGESSRRGDSRSVPRPARGDPLSPREQLEQSANSRRVRGRDPRAQ 48
           + +S +R     VPRPAR  P++P  + E+S+  ++ R RD R +
Sbjct: 310 VSQSLQRPPKPKVPRPAR--PVTPAAKTEKSSEKKQSRHRDRRPE 352

>FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear factor 3|
           forkhead homolog 1) (HNF-3/forkhead-like protein 1)
           (HFH-1) (HFH-1l)
          Length = 400

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/65 (33%), Positives = 27/65 (41%)
 Frame = -1

Query: 211 RTSSESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 32
           R S  +TVS SG  PE A PGP+    AA          +P       A   E S  +  
Sbjct: 211 RLSHRTTVSASGLRPEEAPPGPAGTPQAAPAARSSPIARSP-------ARQEERSSPASK 263

Query: 31  FSRSY 17
           FS S+
Sbjct: 264 FSSSF 268

>MSH6_SCHPO (O74502) DNA mismatch repair protein msh6|
          Length = 1254

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = -1

Query: 202 SESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSR 23
           + S V+ +  +PE  +P  SP  HA T          PP++D F       SP S S  R
Sbjct: 62  NSSNVNKNSSSPERELP-TSPSHHANTEIDSSSSMLPPPSSDPFS------SPLSSSLHR 114

Query: 22  S 20
           S
Sbjct: 115 S 115

>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 626

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 220 PLVRTSSESTVSCSGKAPEGAIPGPSP 140
           P V  S+E  + C G +PE   PGP+P
Sbjct: 458 PAVGPSAEEKMECEGSSPEPEPPGPAP 484

>ASH2L_MOUSE (Q91X20) Set1/Ash2 histone methyltransferase complex subunit ASH2|
           (ASH2-like protein)
          Length = 623

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +3

Query: 45  GLGSGVPA-PNPSAVGGXXXXXXXXXXVAACRPGDGPGIAPSGAFP---EHETVDSELVR 212
           G G GV A P P A               A   G+GP  AP GA P   E E+ D+ LV 
Sbjct: 7   GPGPGVSAGPGPGAAASATTAEDRETEPVAAGAGEGPSAAP-GAEPSSGEAESGDANLVD 65

Query: 213 TRGI 224
             G+
Sbjct: 66  VSGL 69

>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -1

Query: 196 STVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNP--PTADGFGAGTPEPSP 44
           +TV+ +G    GA P P+PG  AAT          P   T D    G P P P
Sbjct: 384 TTVTMTGN---GARPPPAPGAEAATPGSAQATSLPPSSTTVDSSTEGAPPPGP 433

>ADCY9_XENLA (P98999) Adenylate cyclase type 9 (EC 4.6.1.1) (Adenylate cyclase|
           type IX) (ATP pyrophosphate-lyase 9) (Adenylyl cyclase
           9) (xlAC)
          Length = 1305

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 67  PRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMKQSTQNWY 210
           P  R   +  SSCS GESG  + G G+      ++L    ++ST NW+
Sbjct: 38  PSRRCKYSISSSCSSGESGVKKTG-GSGGARRQKKLPQLFERSTSNWW 84

>KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.11.13)|
          Length = 1174

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
 Frame = -1

Query: 223 IPLVRTSSESTVSCSGKAPEGAIPGPSP--GRHAATXXXXXXXXSNPPTADGFGAGTPEP 50
           +   R S  +T + S  AP     G  P  G    +         N  T  G+G    + 
Sbjct: 666 VDAARASYSTTGTASTGAPTSPTSGSRPPSGPRTQSSVAAAAAAMNKATQPGYGRSNTDY 725

Query: 49  SPQSQSFSRSYGSVLP 2
           SPQS    RS GS  P
Sbjct: 726 SPQS---GRSSGSGYP 738

>Y659_PASMU (Q9CMZ1) Hypothetical UPF0192 protein PM0659 precursor|
          Length = 1905

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
 Frame = +3

Query: 282 DFEASLISRQEAAIRRERALAYAFSHQWKSS------SRSFNPMFVDPNNPHWGWSWLER 443
           DF   ++  Q      E+ L   F+H  K +      S    P F   N+PHW ++ + R
Sbjct: 262 DFSTGILIAQNEKNEAEQVLHLNFTHSIKGNELEKHISAYLLPEFTPENHPHWRYNLISR 321

>ORC4_SCHPO (Q9Y794) Origin recognition complex subunit 4|
          Length = 972

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 37  GSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMKQST 198
           GSE   +  R R  ++ +   S    +   P+ GRG  R  PL  + PS+ + T
Sbjct: 117 GSEPIIKRKRGRPPKIKSSSPSTKLDDPLKPKRGRGRPRLHPLPVVQPSVDEGT 170

>MCM6_MOUSE (P97311) DNA replication licensing factor MCM6 (Mis5 homolog)|
          Length = 821

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 350 VFPSVEEQFKVLQPNVCR 403
           V   VE+QFK  QPN+CR
Sbjct: 164 VIKDVEQQFKYTQPNICR 181

>DCP2_ASHGO (Q75BK1) mRNA decapping enzyme 2 (EC 3.-.-.-)|
          Length = 880

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 21/60 (35%), Positives = 23/60 (38%)
 Frame = -1

Query: 220 PLVRTSSESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQ 41
           PLV +  ES  S S  AP    P PS     +            P A G  AG P P PQ
Sbjct: 287 PLVFSDDESQASISTSAPTTVPPAPSTANSQSV----------QPIAAGAYAGYPFPFPQ 336

>MCM6_HUMAN (Q14566) DNA replication licensing factor MCM6 (P105MCM)|
          Length = 821

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 350 VFPSVEEQFKVLQPNVCR 403
           V   VE+QFK  QPN+CR
Sbjct: 164 VIRDVEQQFKYTQPNICR 181

>ATPBM_ARATH (P83483) ATP synthase beta chain 1, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 556

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = -1

Query: 217 LVRTSS-ESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQ 41
           L+R+SS  S      + P   +P PSP RHAA         +   T+    +  P  +P 
Sbjct: 10  LLRSSSGRSAAKLGNRNPR--LPSPSPARHAAPCSYLLGRVAEYATSSPASSAAPSSAPA 67

Query: 40  SQSFSRSY 17
                ++Y
Sbjct: 68  KDEGKKTY 75

>GLVG_ECOLI (P31450) Probable 6-phospho-alpha-glucosidase (EC 3.2.1.122)|
          Length = 212

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = +3

Query: 243 KALRWSSRMLTQCDFEASLISRQEAAI-----RRERALAYAFSHQWKSSSRSF 386
           + LR ++++L  CD    + SR    +     ++ R   Y  +H W + SRSF
Sbjct: 157 RRLRPNAKILNICDMPIGIESRMAQIVGLQDRKQMRVRYYGLNHWWSAISRSF 209

>ATU_DROME (Q94546) Another transcription unit protein|
          Length = 725

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = +1

Query: 25  GKRIGSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMK 189
           G   GS+   R      R      SS SR  SGSPR+ R    ES   +LS S +
Sbjct: 28  GSAPGSQRSRRSGSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRHSQLSGSAR 82

>LRP8_MOUSE (Q924X6) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2)
          Length = 996

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -2

Query: 390 G*RTLNCSSTDGKTRMRALSLFLSQPPACLLDLLR 286
           G +T++ ++TDG+ R    S  LS+P A  +D LR
Sbjct: 550 GNKTISVATTDGRRRCTLFSRELSEPRAIAVDPLR 584


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,263,437
Number of Sequences: 219361
Number of extensions: 1356487
Number of successful extensions: 5003
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4987
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)