| Clone Name | baet22b01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 289 bits (146), Expect = 4e-75 Identities = 230/258 (89%) Strand = Plus / Plus Query: 101 gcgacttctccatcgtcgggtactcggaggaggacctgtcgtcgcacgacaggctcgtcg 160 |||| |||||||| |||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 116518 gcgagttctccattgtcgggtactcggaggaggacctggcgtcgcacgaccggctgatcg 116577 Query: 161 agctgtttgagaagtggctggccaagcaccagaaggcgtacgcgagcttcgaggagaagc 220 ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 116578 agctgttcgagaagtgggtggcaaagtaccggaaggcgtacgcgagcttcgaggagaagg 116637 Query: 221 tgcaccggttcgaggtgttcaaggacaacctgaagctcatcgacgagatcaaccgggagg 280 || ||||||||||||||||||||||||| || | ||||||||| |||||| | ||| Sbjct: 116638 tgaggaggttcgaggtgttcaaggacaacctcaaccacatcgacgacatcaacaagaagg 116697 Query: 281 tgaccagctactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaagg 340 | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 116698 tcaccagctactggctggggctcaacgagttcgccgacctcacccacgacgagttcaagg 116757 Query: 341 ccgcctacctcggcctca 358 | ||||||||||||||| Sbjct: 116758 cgacctacctcggcctca 116775
>gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine protease CP1 mRNA, complete cds Length = 1227 Score = 289 bits (146), Expect = 4e-75 Identities = 230/258 (89%) Strand = Plus / Plus Query: 101 gcgacttctccatcgtcgggtactcggaggaggacctgtcgtcgcacgacaggctcgtcg 160 |||| |||||||| |||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 101 gcgagttctccattgtcgggtactcggaggaggacctggcgtcgcacgaccggctgatcg 160 Query: 161 agctgtttgagaagtggctggccaagcaccagaaggcgtacgcgagcttcgaggagaagc 220 ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 161 agctgttcgagaagtgggtggcaaagtaccggaaggcgtacgcgagcttcgaggagaagg 220 Query: 221 tgcaccggttcgaggtgttcaaggacaacctgaagctcatcgacgagatcaaccgggagg 280 || ||||||||||||||||||||||||| || | ||||||||| |||||| | ||| Sbjct: 221 tgaggaggttcgaggtgttcaaggacaacctcaaccacatcgacgacatcaacaagaagg 280 Query: 281 tgaccagctactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaagg 340 | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 281 tcaccagctactggctggggctcaacgagttcgccgacctcacccacgacgagttcaagg 340 Query: 341 ccgcctacctcggcctca 358 | ||||||||||||||| Sbjct: 341 cgacctacctcggcctca 358
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 289 bits (146), Expect = 4e-75 Identities = 230/258 (89%) Strand = Plus / Plus Query: 101 gcgacttctccatcgtcgggtactcggaggaggacctgtcgtcgcacgacaggctcgtcg 160 |||| |||||||| |||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 54669 gcgagttctccattgtcgggtactcggaggaggacctggcgtcgcacgaccggctgatcg 54728 Query: 161 agctgtttgagaagtggctggccaagcaccagaaggcgtacgcgagcttcgaggagaagc 220 ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 54729 agctgttcgagaagtgggtggcaaagtaccggaaggcgtacgcgagcttcgaggagaagg 54788 Query: 221 tgcaccggttcgaggtgttcaaggacaacctgaagctcatcgacgagatcaaccgggagg 280 || ||||||||||||||||||||||||| || | ||||||||| |||||| | ||| Sbjct: 54789 tgaggaggttcgaggtgttcaaggacaacctcaaccacatcgacgacatcaacaagaagg 54848 Query: 281 tgaccagctactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaagg 340 | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 54849 tcaccagctactggctggggctcaacgagttcgccgacctcacccacgacgagttcaagg 54908 Query: 341 ccgcctacctcggcctca 358 | ||||||||||||||| Sbjct: 54909 cgacctacctcggcctca 54926
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 289 bits (146), Expect = 4e-75 Identities = 230/258 (89%) Strand = Plus / Plus Query: 101 gcgacttctccatcgtcgggtactcggaggaggacctgtcgtcgcacgacaggctcgtcg 160 |||| |||||||| |||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 454871 gcgagttctccattgtcgggtactcggaggaggacctggcgtcgcacgaccggctgatcg 454930 Query: 161 agctgtttgagaagtggctggccaagcaccagaaggcgtacgcgagcttcgaggagaagc 220 ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 454931 agctgttcgagaagtgggtggcaaagtaccggaaggcgtacgcgagcttcgaggagaagg 454990 Query: 221 tgcaccggttcgaggtgttcaaggacaacctgaagctcatcgacgagatcaaccgggagg 280 || ||||||||||||||||||||||||| || | ||||||||| |||||| | ||| Sbjct: 454991 tgaggaggttcgaggtgttcaaggacaacctcaaccacatcgacgacatcaacaagaagg 455050 Query: 281 tgaccagctactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaagg 340 | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 455051 tcaccagctactggctggggctcaacgagttcgccgacctcacccacgacgagttcaagg 455110 Query: 341 ccgcctacctcggcctca 358 | ||||||||||||||| Sbjct: 455111 cgacctacctcggcctca 455128 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 301 ctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||| ||||| |||||||| |||||||||||| Sbjct: 24954164 ctcaacgccttcgcggacctcacgcacgacgagttc 24954199
>dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G09, full insert sequence Length = 1409 Score = 274 bits (138), Expect = 2e-70 Identities = 228/258 (88%) Strand = Plus / Plus Query: 101 gcgacttctccatcgtcgggtactcggaggaggacctgtcgtcgcacgacaggctcgtcg 160 |||| |||||||| |||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 159 gcgagttctccattgtcgggtactcggaggaggacctggcgtcgcacgaccggctgatcg 218 Query: 161 agctgtttgagaagtggctggccaagcaccagaaggcgtacgcgagcttcgaggagaagc 220 ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 219 agctgttcgagaagtgggtggcaaagtaccggaaggcgtacgcgagcttcgaggagaagg 278 Query: 221 tgcaccggttcgaggtgttcaaggacaacctgaagctcatcgacgagatcaaccgggagg 280 || ||||||||||||||||||||| ||| || | |||||||| |||||| | ||| Sbjct: 279 tgaggaggttcgaggtgttcaaggacagcctcaaccacatcgacgtcatcaacaagaagg 338 Query: 281 tgaccagctactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaagg 340 | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 339 tcaccagctactggctggggctcaacgagttcgccgacctcacccacgacgagttcaagg 398 Query: 341 ccgcctacctcggcctca 358 | ||||||||||||||| Sbjct: 399 cgacctacctcggcctca 416
>gb|AY104930.1| Zea mays PCO132946 mRNA sequence Length = 1422 Score = 234 bits (118), Expect = 2e-58 Identities = 222/256 (86%), Gaps = 3/256 (1%) Strand = Plus / Plus Query: 105 cttctccatcgtcgggtactcggaggaggacctgtcgtcgcacgacaggctcgtcgagct 164 |||||||||||| ||||||||| |||||||||| || ||||||| |||||||| ||| Sbjct: 169 cttctccatcgtggggtactcgccggaggacctgacgcagcacgaccggctcgtcaggct 228 Query: 165 gtttgagaagtggctggccaagcaccagaaggcgtacgcgagcttcgaggagaagctgca 224 ||| ||| ||||| |||||||| ||| |||||||||| ||||||||||||||||||| Sbjct: 229 gttcgaggagtgggtggccaagtaccgcaaggcgtacggcagcttcgaggagaagctgcg 288 Query: 225 ccggttcgaggtgttcaaggacaacctgaagctcatcgacgagatcaaccg---ggaggt 281 |||||||||||||||||||||||||||| | | |||||||||| |||| | |||||| Sbjct: 289 ccggttcgaggtgttcaaggacaacctgcaccacatcgacgaggccaacaggaaggaggt 348 Query: 282 gaccagctactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggc 341 |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 349 caccagctactggctgggcctcaacgccttcgccgacctcacgcacgacgagttcaaggc 408 Query: 342 cgcctacctcggcctc 357 | ||||||| |||||| Sbjct: 409 cacctacctgggcctc 424
>ref|NM_189456.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 121 tactcggaggaggacctgtcgtcgcacgacaggctcgtcgagctgtttgagaagtggctg 180 |||||||||||||| ||| ||||||| || ||||| | |||||||| ||||||| || Sbjct: 109 tactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatg 168 Query: 181 gccaagcaccagaaggcgtacgcgagcttcgaggagaagctgcaccggttcgaggtgttc 240 |||||| ||| ||||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct: 169 gccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttc 228 Query: 241 aaggacaacctgaagctcatcgacgagatcaaccgggaggtgaccagctactggctcggc 300 ||||||||||| || | |||||||||| ||| | || | ||| |||||||||| ||| Sbjct: 229 aaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggc 288 Query: 301 ctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggcctca 358 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 289 ctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctca 346
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 121 tactcggaggaggacctgtcgtcgcacgacaggctcgtcgagctgtttgagaagtggctg 180 |||||||||||||| ||| ||||||| || ||||| | |||||||| ||||||| || Sbjct: 42848173 tactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatg 42848232 Query: 181 gccaagcaccagaaggcgtacgcgagcttcgaggagaagctgcaccggttcgaggtgttc 240 |||||| ||| ||||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct: 42848233 gccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttc 42848292 Query: 241 aaggacaacctgaagctcatcgacgagatcaaccgggaggtgaccagctactggctcggc 300 ||||||||||| || | |||||||||| ||| | || | ||| |||||||||| ||| Sbjct: 42848293 aaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggc 42848352 Query: 301 ctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggcctca 358 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 42848353 ctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctca 42848410 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 294 gctcggcctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 24340992 gctcggcctcaaccagttctccgacctcaccgacgacgagttc 24340950 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 13831719 tcaaccagttcgccgacctcaccaacgacgagttc 13831685 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 13825537 tcaaccagttcgccgacctcaccaacgacgagttc 13825571 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 6396035 tcaaccagttcgccgacctcaccaacgacgagttc 6396001 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||| ||||||| Sbjct: 12729530 tcaaccagttcgccgacctcaccaacggcgagttc 12729496 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| |||||||||| Sbjct: 24349119 gttcgccgacctcaccgccgacgagttc 24349092
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 121 tactcggaggaggacctgtcgtcgcacgacaggctcgtcgagctgtttgagaagtggctg 180 |||||||||||||| ||| ||||||| || ||||| | |||||||| ||||||| || Sbjct: 41907 tactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatg 41966 Query: 181 gccaagcaccagaaggcgtacgcgagcttcgaggagaagctgcaccggttcgaggtgttc 240 |||||| ||| ||||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct: 41967 gccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttc 42026 Query: 241 aaggacaacctgaagctcatcgacgagatcaaccgggaggtgaccagctactggctcggc 300 ||||||||||| || | |||||||||| ||| | || | ||| |||||||||| ||| Sbjct: 42027 aaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggc 42086 Query: 301 ctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggcctca 358 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 42087 ctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctca 42144
>dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H03, full insert sequence Length = 1377 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 121 tactcggaggaggacctgtcgtcgcacgacaggctcgtcgagctgtttgagaagtggctg 180 |||||||||||||| ||| ||||||| || ||||| | |||||||| ||||||| || Sbjct: 159 tactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatg 218 Query: 181 gccaagcaccagaaggcgtacgcgagcttcgaggagaagctgcaccggttcgaggtgttc 240 |||||| ||| ||||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct: 219 gccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttc 278 Query: 241 aaggacaacctgaagctcatcgacgagatcaaccgggaggtgaccagctactggctcggc 300 ||||||||||| || | |||||||||| ||| | || | ||| |||||||||| ||| Sbjct: 279 aaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggc 338 Query: 301 ctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggcctca 358 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 339 ctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctca 396
>dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B02, full insert sequence Length = 1377 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 121 tactcggaggaggacctgtcgtcgcacgacaggctcgtcgagctgtttgagaagtggctg 180 |||||||||||||| ||| ||||||| || ||||| | |||||||| ||||||| || Sbjct: 159 tactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatg 218 Query: 181 gccaagcaccagaaggcgtacgcgagcttcgaggagaagctgcaccggttcgaggtgttc 240 |||||| ||| ||||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct: 219 gccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttc 278 Query: 241 aaggacaacctgaagctcatcgacgagatcaaccgggaggtgaccagctactggctcggc 300 ||||||||||| || | |||||||||| ||| | || | ||| |||||||||| ||| Sbjct: 279 aaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggc 338 Query: 301 ctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggcctca 358 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 339 ctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctca 396
>dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D02, full insert sequence Length = 1519 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 121 tactcggaggaggacctgtcgtcgcacgacaggctcgtcgagctgtttgagaagtggctg 180 |||||||||||||| ||| ||||||| || ||||| | |||||||| ||||||| || Sbjct: 159 tactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatg 218 Query: 181 gccaagcaccagaaggcgtacgcgagcttcgaggagaagctgcaccggttcgaggtgttc 240 |||||| ||| ||||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct: 219 gccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttc 278 Query: 241 aaggacaacctgaagctcatcgacgagatcaaccgggaggtgaccagctactggctcggc 300 ||||||||||| || | |||||||||| ||| | || | ||| |||||||||| ||| Sbjct: 279 aaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggc 338 Query: 301 ctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggcctca 358 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 339 ctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctca 396
>dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D05, full insert sequence Length = 1332 Score = 186 bits (94), Expect = 4e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 121 tactcggaggaggacctgtcgtcgcacgacaggctcgtcgagctgtttgagaagtggctg 180 |||||||||||||| ||| ||||||| || ||||| | |||||||| ||||||| || Sbjct: 159 tactcggaggaggatctggcgtcgcatgagaggctgatggagctgttcgagaagttcatg 218 Query: 181 gccaagcaccagaaggcgtacgcgagcttcgaggagaagctgcaccggttcgaggtgttc 240 |||||| ||| ||||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct: 219 gccaagtaccgcaaggcctactccagcttggaggagaagctgaggaggttcgaggtgttc 278 Query: 241 aaggacaacctgaagctcatcgacgagatcaaccgggaggtgaccagctactggctcggc 300 ||||||||||| || | |||||||||| ||| | || | ||| |||||||||| ||| Sbjct: 279 aaggacaacctcaaccacatcgacgaggagaacaagaagatcaccggctactggctgggc 338 Query: 301 ctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggcctca 358 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 339 ctcaacgagttcgccgacctcacccacgacgagttcaaggctgcctacctcggcctca 396
>ref|XM_474825.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 291 ctggctcggcctcaacgagttcgccgacctcacccacgacgagttca 337 |||||||||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 234 ctggctcggcgtcaaccagttcgccgacctcaccaatgacgagttca 280 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccggttcgaggtgttcaagg 244 |||||||||||||||||||| Sbjct: 168 ccggttcgaggtgttcaagg 187
>ref|NM_192771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 294 gctcggcctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 261 gctcggcctcaaccagttctccgacctcaccgacgacgagttc 303
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 291 ctggctcggcctcaacgagttcgccgacctcacccacgacgagttca 337 |||||||||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 133991 ctggctcggcgtcaaccagttcgccgacctcaccaatgacgagttca 134037 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccggttcgaggtgttcaagg 244 |||||||||||||||||||| Sbjct: 133925 ccggttcgaggtgttcaagg 133944
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 291 ctggctcggcctcaacgagttcgccgacctcacccacgacgagttca 337 |||||||||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 6971120 ctggctcggcgtcaaccagttcgccgacctcaccaatgacgagttca 6971166 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 33160563 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 33160504 Query: 355 ctcag 359 ||||| Sbjct: 33160503 ctcag 33160499 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttcaaggcc 342 ||||||||||||||||| ||| |||||||| |||| Sbjct: 7212664 agttcgccgacctcaccaacgccgagttcagggcc 7212698 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttca 337 ||||||||||||||||| | |||||||||| Sbjct: 7103790 agttcgccgacctcaccaatgacgagttca 7103819 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 310 ttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 ||||||||||||||| ||| ||||||| ||| ||||||||||| Sbjct: 34240267 ttcgccgacctcaccaacggcgagttccgcgccacctacctcggc 34240311 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccggttcgaggtgttcaagg 244 |||||||||||||||||||| Sbjct: 7103707 ccggttcgaggtgttcaagg 7103726 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccggttcgaggtgttcaagg 244 |||||||||||||||||||| Sbjct: 6971054 ccggttcgaggtgttcaagg 6971073 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||| |||||||||||||||| |||||| Sbjct: 463088 gttcaccgacctcacccacgaggagttc 463061
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 294 gctcggcctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 86896 gctcggcctcaaccagttctccgacctcaccgacgacgagttc 86854 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| |||||||||| Sbjct: 95023 gttcgccgacctcaccgccgacgagttc 94996
>dbj|AK070448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F12, full insert sequence Length = 1403 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 294 gctcggcctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 293 gctcggcctcaaccagttctccgacctcaccgacgacgagttc 335
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 289 tactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggc 341 |||||||||||| ||||| |||||||||| |||||| ||| ||||||||||| Sbjct: 10052685 tactggctcggcgtcaaccagttcgccgatctcaccagcgaggagttcaaggc 10052737
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 289 tactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggc 341 |||||||||||| ||||| |||||||||| |||||| ||| ||||||||||| Sbjct: 10052570 tactggctcggcgtcaaccagttcgccgatctcaccagcgaggagttcaaggc 10052622
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 289 tactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggc 341 |||||||||||| ||||| |||||||||| |||||| ||| ||||||||||| Sbjct: 109936 tactggctcggcgtcaaccagttcgccgatctcaccagcgaggagttcaaggc 109884
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132906 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 289 tactggctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggc 341 |||||||||||| ||||| |||||||||| |||||| ||| ||||||||||| Sbjct: 5389 tactggctcggcgtcaaccagttcgccgatctcaccagcgaggagttcaaggc 5337
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 192 gaaggcgtacgcgagcttcgaggagaag 219 |||||||||||||||||||||||||||| Sbjct: 82887 gaaggcgtacgcgagcttcgaggagaag 82914 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 289 tactggctcggcctcaacgagttcgccgac 318 |||||||| |||| |||||||||||||||| Sbjct: 82997 tactggctgggccacaacgagttcgccgac 83026 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 ttcaaggccgcctacctcggcctca 358 |||||||| |||||||||||||||| Sbjct: 83050 ttcaaggcggcctacctcggcctca 83074 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 127 gaggaggacctgtcgtcgcacgacaggct 155 |||||||||||| ||||||||||| |||| Sbjct: 82833 gaggaggacctggcgtcgcacgaccggct 82861
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 192 gaaggcgtacgcgagcttcgaggagaag 219 |||||||||||||||||||||||||||| Sbjct: 16501446 gaaggcgtacgcgagcttcgaggagaag 16501419 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| ||||||||||| Sbjct: 30731254 gttcgccgacctcaccgacgacgagttc 30731281 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 289 tactggctcggcctcaacgagttcgccgac 318 |||||||| |||| |||||||||||||||| Sbjct: 16501336 tactggctgggccacaacgagttcgccgac 16501307 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 127 gaggaggacctgtcgtcgcacgacaggct 155 |||||||||||| ||||||||||| |||| Sbjct: 16501500 gaggaggacctggcgtcgcacgaccggct 16501472 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 ttcaaggccgcctacctcggcctca 358 |||||||| |||||||||||||||| Sbjct: 16501283 ttcaaggcggcctacctcggcctca 16501259
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 192 gaaggcgtacgcgagcttcgaggagaag 219 |||||||||||||||||||||||||||| Sbjct: 16495079 gaaggcgtacgcgagcttcgaggagaag 16495052 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| ||||||||||| Sbjct: 30822678 gttcgccgacctcaccgacgacgagttc 30822705 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 289 tactggctcggcctcaacgagttcgccgac 318 |||||||| |||| |||||||||||||||| Sbjct: 16494969 tactggctgggccacaacgagttcgccgac 16494940 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 127 gaggaggacctgtcgtcgcacgacaggct 155 |||||||||||| ||||||||||| |||| Sbjct: 16495133 gaggaggacctggcgtcgcacgaccggct 16495105 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 ttcaaggccgcctacctcggcctca 358 |||||||| |||||||||||||||| Sbjct: 16494916 ttcaaggcggcctacctcggcctca 16494892
>gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) mRNA, complete cds Length = 1830 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| ||||||||| | |||| ||||||||||| Sbjct: 378 ctcggcctcaaccgcttcgccgacctcaccaacgacgagtacccggccacctacctcggc 437
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 260 tcaaccagttcgccgacctcaccaacgacgagttc 294
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 263 tcaaccagttcgccgacctcaccaacgacgagttc 297
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 266 tcaaccagttcgccgacctcaccaacgacgagttc 300
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 288 ctactggctcggcctcaacgagttcgccgac 318 ||||||||||||||||||| ||||||||||| Sbjct: 22191373 ctactggctcggcctcaacaagttcgccgac 22191343 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 294 gctcggcctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 22137823 gctcggcctcaacaagttctccgacctcacctacgaggagttc 22137781 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 gctcggcctcaacgagttcgccgac 318 ||||||||||||| ||||||||||| Sbjct: 22120699 gctcggcctcaacaagttcgccgac 22120675 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgac 318 |||||||||||| ||||||||||| Sbjct: 22187069 ctcggcctcaacaagttcgccgac 22187092 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ccgacctcacccacgacgagttca 337 ||||||||||| |||||||||||| Sbjct: 22051805 ccgacctcaccaacgacgagttca 22051782
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 288 ctactggctcggcctcaacgagttcgccgac 318 ||||||||||||||||||| ||||||||||| Sbjct: 11271 ctactggctcggcctcaacaagttcgccgac 11241 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgac 318 |||||||||||| ||||||||||| Sbjct: 6967 ctcggcctcaacaagttcgccgac 6990
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 18430 tcaaccagttcgccgacctcaccaacgacgagttc 18396
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 167101 tcaaccagttcgccgacctcaccaacgacgagttc 167067
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 288 ctactggctcggcctcaacgagttcgccgac 318 ||||||||||||||||||| ||||||||||| Sbjct: 112866 ctactggctcggcctcaacaagttcgccgac 112836 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 294 gctcggcctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 59316 gctcggcctcaacaagttctccgacctcacctacgaggagttc 59274 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 gctcggcctcaacgagttcgccgac 318 ||||||||||||| ||||||||||| Sbjct: 42192 gctcggcctcaacaagttcgccgac 42168 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgac 318 |||||||||||| ||||||||||| Sbjct: 108562 ctcggcctcaacaagttcgccgac 108585
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 69122 tcaaccagttcgccgacctcaccaacgacgagttc 69088 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||||||||||| Sbjct: 62940 tcaaccagttcgccgacctcaccaacgacgagttc 62974
>gb|AY106278.1| Zea mays PCO137999 mRNA sequence Length = 1382 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 ||||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 69 agttcgccgacctcaccaacgacgagttccgcgccgcgtacctcggc 115
>ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 259 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 318 Query: 355 ctcag 359 ||||| Sbjct: 319 ctcag 323
>dbj|AK121500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A11, full insert sequence Length = 752 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 324 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 383 Query: 355 ctcag 359 ||||| Sbjct: 384 ctcag 388
>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full insert sequence Length = 1753 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 324 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 383 Query: 355 ctcag 359 ||||| Sbjct: 384 ctcag 388
>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full insert sequence Length = 1774 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 324 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 383 Query: 355 ctcag 359 ||||| Sbjct: 384 ctcag 388
>gb|AY103676.1| Zea mays PCO102242 mRNA sequence Length = 1878 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| ||||||||| | ||| ||||||||||| Sbjct: 413 ctcggcctcaaccgcttcgccgacctcaccaacgacgagtaccgcgccacctacctcggc 472 Query: 355 ctcag 359 |||| Sbjct: 473 gtcag 477
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 50953 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 50894 Query: 355 ctcag 359 ||||| Sbjct: 50893 ctcag 50889
>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha, complete cds Length = 1929 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 304 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 363 Query: 355 ctcag 359 ||||| Sbjct: 364 ctcag 368
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttc 336 |||||||||||||||||||||| |||||| Sbjct: 311 agttcgccgacctcacccacgaggagttc 339
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| |||| |||| | || | ||||||||||| Sbjct: 43212 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggc 43153 Query: 355 ctcag 359 ||||| Sbjct: 43152 ctcag 43148
>ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1460 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| ||||||||||| Sbjct: 330 gttcgccgacctcaccgacgacgagttc 357
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| ||||||||||| Sbjct: 72529 gttcgccgacctcaccgacgacgagttc 72502
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| ||||||||||| Sbjct: 31136 gttcgccgacctcaccgacgacgagttc 31109
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| ||||||||||| Sbjct: 39955 gttcgccgacctcaccgacgacgagttc 39982
>dbj|AB020961.1| Zea mays mRNA for cysteine protease component of protease-inhibitor complex, complete cds Length = 1828 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 295 ctcggcctcaacgagttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 |||||||||||| ||||||||||||||| ||||||||| | ||| ||||||||||| Sbjct: 377 ctcggcctcaaccgcttcgccgacctcaccaacgacgagtaccgcgccacctacctcggc 436
>ref|XM_474851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttcaaggcc 342 ||||||||||||||||| ||| |||||||| |||| Sbjct: 161 agttcgccgacctcaccaacgccgagttcagggcc 195
>ref|NM_183859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||| ||||||| Sbjct: 269 tcaaccagttcgccgacctcaccaacggcgagttc 303
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||| ||||||| Sbjct: 9929 tcaaccagttcgccgacctcaccaacggcgagttc 9895
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 302 tcaacgagttcgccgacctcacccacgacgagttc 336 ||||| ||||||||||||||||| ||| ||||||| Sbjct: 96559 tcaaccagttcgccgacctcaccaacggcgagttc 96525
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttcaaggcc 342 ||||||||||||||||| ||| |||||||| |||| Sbjct: 76401 agttcgccgacctcaccaacgccgagttcagggcc 76435
>gb|AY781344.1| Oryza sativa (japonica cultivar-group) putative cysteine protease mRNA, complete cds Length = 1279 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttcaaggcc 342 ||||||||||||||||| ||| |||||||| |||| Sbjct: 380 agttcgccgacctcaccaacgccgagttcagggcc 414
>ref|NM_101938.2| Arabidopsis thaliana XCP2 (XYLEM CYSTEINE PEPTIDASE 2); cysteine-type peptidase/ peptidase AT1G20850 (XCP2) mRNA, complete cds Length = 1285 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 286 agctactggctcggcctcaacgagtt 311 |||||||||||||| ||||||||||| Sbjct: 295 agctactggctcgggctcaacgagtt 320
>ref|XM_474836.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttca 337 ||||||||||||||||| | |||||||||| Sbjct: 251 agttcgccgacctcaccaatgacgagttca 280 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccggttcgaggtgttcaagg 244 |||||||||||||||||||| Sbjct: 168 ccggttcgaggtgttcaagg 187
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 agttcgccgacctcacccacgacgagttca 337 ||||||||||||||||| | |||||||||| Sbjct: 124981 agttcgccgacctcaccaatgacgagttca 125010 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccggttcgaggtgttcaagg 244 |||||||||||||||||||| Sbjct: 124898 ccggttcgaggtgttcaagg 124917
>emb|AJ222778.1|HVJ222778 Hordeum vulgare mRNA for putative thiol protease, clone RG42 Length = 350 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttcaaggcc 342 |||| |||||||||||||||| ||||||| |||| Sbjct: 306 gttcaccgacctcacccacgaagagttcatggcc 339 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 211 gaggagaagctgcaccggttcgaggtgt 238 ||||||||||||| ||||||||||||| Sbjct: 205 gaggagaagctgcgtcggttcgaggtgt 232
>gb|BT004822.1| Arabidopsis thaliana At1g20850 gene, complete cds Length = 1071 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 286 agctactggctcggcctcaacgagtt 311 |||||||||||||| ||||||||||| Sbjct: 271 agctactggctcgggctcaacgagtt 296
>gb|AF191028.1|AF191028 Arabidopsis thaliana papain-type cysteine endopeptidase XCP2 mRNA, complete cds Length = 1219 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 286 agctactggctcggcctcaacgagtt 311 |||||||||||||| ||||||||||| Sbjct: 276 agctactggctcgggctcaacgagtt 301
>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I, complete sequence Length = 143879 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 286 agctactggctcggcctcaacgagtt 311 |||||||||||||| ||||||||||| Sbjct: 142935 agctactggctcgggctcaacgagtt 142960
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 cttgcccaaggcggtggactgg 444 |||||||||||||||||||||| Sbjct: 64962 cttgcccaaggcggtggactgg 64983
>gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genomic sequence, complete sequence Length = 103192 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 agctactggctcggcctcaacgagtt 311 |||||||||||||| ||||||||||| Sbjct: 95394 agctactggctcgggctcaacgagtt 95369
>ref|XM_474296.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 310 ttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 ||||||||||||||| ||| ||||||| ||| ||||||||||| Sbjct: 355 ttcgccgacctcaccaacggcgagttccgcgccacctacctcggc 399
>gb|AY233211.2| Streptomyces griseoflavus strain Goe 3592 gilvocarcin biosynthetic gene cluster, complete sequence Length = 33846 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 320 tcacccacgacgagttcaaggccgcctac 348 |||| ||||||||| |||||||||||||| Sbjct: 20600 tcacgcacgacgagatcaaggccgcctac 20628
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 310 ttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 ||||||||||||||| ||| ||||||| ||| ||||||||||| Sbjct: 151649 ttcgccgacctcaccaacggcgagttccgcgccacctacctcggc 151693
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 296 tcggcctcaacgagttcgccgacctcacccacgacga 332 ||||||||||| || ||||||||||||| ||||||| Sbjct: 9495480 tcggcctcaacatgtccgccgacctcaccgacgacga 9495444
>dbj|AP005157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0005L24 Length = 155365 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 296 tcggcctcaacgagttcgccgacctcacccacgacga 332 ||||||||||| || ||||||||||||| ||||||| Sbjct: 25510 tcggcctcaacatgtccgccgacctcaccgacgacga 25474
>dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E06, full insert sequence Length = 1722 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 310 ttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 ||||||||||||||| ||| ||||||| ||| ||||||||||| Sbjct: 466 ttcgccgacctcaccaacggcgagttccgcgccacctacctcggc 510
>dbj|AK071733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107H18, full insert sequence Length = 1353 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 gctcggcctcaacgagttcgccgac 318 ||||||||||||| ||||||||||| Sbjct: 466 gctcggcctcaacaagttcgccgac 490
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 310 ttcgccgacctcacccacgacgagttcaaggccgcctacctcggc 354 ||||||||||||||| ||| ||||||| ||| ||||||||||| Sbjct: 22906 ttcgccgacctcaccaacggcgagttccgcgccacctacctcggc 22950
>ref|NM_124955.3| Arabidopsis thaliana FLA1 (fasciclin-like arabinogalactan-protein 1) AT5G55730 (FLA1) mRNA, complete cds Length = 1571 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 1094 gccggagcaggagccggagcttca 1071
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ggagcagcagccggagcttc 396 |||||||||||||||||||| Sbjct: 2870106 ggagcagcagccggagcttc 2870125
>ref|XM_475664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1353 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 301 ctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||| ||||| |||||||| |||||||||||| Sbjct: 247 ctcaacgccttcgcggacctcacgcacgacgagttc 282
>ref|XM_470991.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||| |||||||||||||||| |||||| Sbjct: 312 gttcaccgacctcacccacgaggagttc 339
>ref|NM_192773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| |||||||||| Sbjct: 258 gttcgccgacctcaccgccgacgagttc 285
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 301 ctcaacgagttcgccgacctcacccacgacgagttc 336 ||||||| ||||| |||||||| |||||||||||| Sbjct: 23017 ctcaacgccttcgcggacctcacgcacgacgagttc 23052
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgacgagatcaaccggg 277 |||||||||||||||||||| Sbjct: 2281412 catcgacgagatcaaccggg 2281431
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gccggagcagcagccggagc 393 |||||||||||||||||||| Sbjct: 1163611 gccggagcagcagccggagc 1163630 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gccggagcagcagccggagc 393 |||||||||||||||||||| Sbjct: 1163578 gccggagcagcagccggagc 1163597
>emb|BX323566.13| Zebrafish DNA sequence from clone DKEYP-67A8 in linkage group 2, complete sequence Length = 108226 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcagcagccggagcttcagg 399 |||||||||||||||||||| Sbjct: 99290 gcagcagccggagcttcagg 99309
>gb|AC122383.4| Mus musculus BAC clone RP23-479O8 from chromosome 7, complete sequence Length = 196195 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctgttcttctcctctgtgtc 78 |||||||||||||||||||| Sbjct: 180797 ctgttcttctcctctgtgtc 180816
>gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete sequence Length = 119925 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tcttctcctctgtgtcggag 82 |||||||||||||||||||| Sbjct: 65070 tcttctcctctgtgtcggag 65089
>ref|XM_500150.1| Yarrowia lipolytica CLIB122, YALI0A17127g predicted mRNA Length = 4716 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agctgtttgagaagtggctg 180 |||||||||||||||||||| Sbjct: 1097 agctgtttgagaagtggctg 1116
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase Length = 5593 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| |||| |||||| Sbjct: 3659 gttcgccgacctcaccgacgaggagttc 3686
>gb|BT008510.1| Arabidopsis thaliana At5g55730 gene, complete cds Length = 1275 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 1025 gccggagcaggagccggagcttca 1002
>emb|AL645909.11| Mouse DNA sequence from clone RP23-216O18 on chromosome 11 Contains the Lcp2 gene for lymphocyte cytosolic protein 2, the 5' end of a novel gene and a novel gene, complete sequence Length = 186087 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 ctacctcggcctcagccctcctcc 368 |||||| ||||||||||||||||| Sbjct: 62941 ctaccttggcctcagccctcctcc 62918
>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two novel genes, the 3' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two CpG islands, complete sequence Length = 190198 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctcctctgtgtcggagcatgtgtg 90 |||||||||||| ||||||||||| Sbjct: 179538 ctcctctgtgtctgagcatgtgtg 179515
>gb|AC022260.6| Homo sapiens chromosome 8, clone RP11-426C8, complete sequence Length = 168515 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 atgacttgcccaaggcggtg 438 |||||||||||||||||||| Sbjct: 43009 atgacttgcccaaggcggtg 43028
>ref|XM_687167.1| PREDICTED: Danio rerio similar to GTPase, IMAP family member 7 (LOC563804), mRNA Length = 1782 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcagcagccggagcttcagg 399 |||||||||||||||||||| Sbjct: 1375 gcagcagccggagcttcagg 1394
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 aggagaagctgcaccggttcgagg 235 ||||||||||||||||| |||||| Sbjct: 2969762 aggagaagctgcaccgggtcgagg 2969739
>ref|XM_688704.1| PREDICTED: Danio rerio similar to GTPase, IMAP family member 7 (LOC565424), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcagcagccggagcttcagg 399 |||||||||||||||||||| Sbjct: 964 gcagcagccggagcttcagg 983
>gb|AY244511.1| Triticum monococcum cultivar G2528 cysteine proteinase (CYS) gene, partial cds Length = 679 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| |||| |||||| Sbjct: 672 gttcgccgacctcaccgacgaggagttc 645
>gb|AY244510.1| Triticum monococcum cultivar G1777 cysteine proteinase (CYS) gene, partial cds Length = 679 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| |||| |||||| Sbjct: 672 gttcgccgacctcaccgacgaggagttc 645
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gccggagcagcagccggagc 393 |||||||||||||||||||| Sbjct: 549934 gccggagcagcagccggagc 549953
>gb|AF333970.1|AF333970 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 1 (Fla1) mRNA, complete cds Length = 1275 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 1025 gccggagcaggagccggagcttca 1002
>emb|BX832713.1|CNS0A177 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH91ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1433 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 1078 gccggagcaggagccggagcttca 1055
>emb|BX832450.1|CNS0A13D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZB07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 1045 gccggagcaggagccggagcttca 1022
>gb|AY088827.1| Arabidopsis thaliana clone 9664 mRNA, complete sequence Length = 810 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 333 gccggagcaggagccggagcttca 310
>gb|BT002537.1| Arabidopsis thaliana putative protein (At5g55730) mRNA, complete cds Length = 1483 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 1095 gccggagcaggagccggagcttca 1072
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gttcaaggccgcctacctcg 352 |||||||||||||||||||| Sbjct: 5509607 gttcaaggccgcctacctcg 5509626
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ccgacctcacccacgacgagttca 337 ||||||||||| |||||||||||| Sbjct: 93869 ccgacctcaccaacgacgagttca 93846
>dbj|AB009050.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDF20 Length = 86699 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 gccggagcagcagccggagcttca 397 |||||||||| ||||||||||||| Sbjct: 50207 gccggagcaggagccggagcttca 50230
>dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C02, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||| |||||||||||||||| |||||| Sbjct: 337 gttcaccgacctcacccacgaggagttc 364
>dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A05, full insert sequence Length = 1383 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||||||||||||||| |||||||||| Sbjct: 338 gttcgccgacctcaccgccgacgagttc 365
>gb|AC154104.2| Mus musculus BAC clone RP24-555C7 from 7, complete sequence Length = 191855 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctgttcttctcctctgtgtc 78 |||||||||||||||||||| Sbjct: 44187 ctgttcttctcctctgtgtc 44206
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 gttcgccgacctcacccacgacgagttc 336 |||| |||||||||||||||| |||||| Sbjct: 101840 gttcaccgacctcacccacgaggagttc 101813
>gb|AC122854.4| Mus musculus BAC clone RP23-178L9 from 1, complete sequence Length = 197331 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 caggtataagtcatggcctc 44 |||||||||||||||||||| Sbjct: 14680 caggtataagtcatggcctc 14699
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agctgtttgagaagtggctg 180 |||||||||||||||||||| Sbjct: 1762571 agctgtttgagaagtggctg 1762552
>emb|AL772149.4| Mouse DNA sequence from clone RP23-108H7 on chromosome 2, complete sequence Length = 196676 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ctctcggttgctgttcttct 68 |||||||||||||||||||| Sbjct: 106434 ctctcggttgctgttcttct 106415 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,239,578 Number of Sequences: 3902068 Number of extensions: 3239578 Number of successful extensions: 69366 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68394 Number of HSP's gapped (non-prelim): 958 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)