| Clone Name | baet22a12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7 | 33 | 0.45 | 2 | APE1_AERPE (O73942) Homing endonuclease I-ApeI (EC 3.1.-.-) (rRN... | 29 | 6.4 |
|---|
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 32.7 bits (73), Expect = 0.45 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = -3 Query: 192 ESR*DSGTAEEMEAKKGDSSGSRSRCGA*LSHRLHAWWCPSVNSFKFQPCD 40 ESR S T E+M A+ D+ RSR +W+CP+ ++F Q CD Sbjct: 6 ESRTASVTGEKMAARGCDACMKRSRA---------SWYCPADDAFLCQSCD 47
>APE1_AERPE (O73942) Homing endonuclease I-ApeI (EC 3.1.-.-) (rRNA| intron-encoded homing endonuclease 1) Length = 222 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +1 Query: 7 KSKSLGS--GGSMVARLKLKGIDGRAPPGVEP 96 KSK L G + KLKGI G AP GVEP Sbjct: 189 KSKKLNELLGRPLPGPSKLKGIGGGAPQGVEP 220 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.132 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,751,275 Number of Sequences: 219361 Number of extensions: 617244 Number of successful extensions: 1256 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1237 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1255 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)