ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet22a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463959.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1015 Score = 119 bits (60), Expect = 8e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 316 gcccaagttccaggactcgaggtgggtcaacgggacctgggacctcagccggttcggcaa 375 ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| | Sbjct: 342 gcccaagttccgggactcgaggtgggtcaacgggacgtgggacctcaggcagttcg---a 398 Query: 376 caccggcggcgccgtcgactgggacgccgtcatcgacgccgaggcc 421 | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 399 gaagggcggcgccgtcgactgggacgccgtcatagacgccgaggcc 444 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 41 atggccatggcgacctccaccttctcccc 69 ||||||||||||||||||||||||||||| Sbjct: 73 atggccatggcgacctccaccttctcccc 101
>ref|XM_506700.1| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.6 mRNA Length = 1096 Score = 119 bits (60), Expect = 8e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 316 gcccaagttccaggactcgaggtgggtcaacgggacctgggacctcagccggttcggcaa 375 ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| | Sbjct: 342 gcccaagttccgggactcgaggtgggtcaacgggacgtgggacctcaggcagttcg---a 398 Query: 376 caccggcggcgccgtcgactgggacgccgtcatcgacgccgaggcc 421 | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 399 gaagggcggcgccgtcgactgggacgccgtcatagacgccgaggcc 444 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 41 atggccatggcgacctccaccttctcccc 69 ||||||||||||||||||||||||||||| Sbjct: 73 atggccatggcgacctccaccttctcccc 101
>dbj|AK101502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E02, full insert sequence Length = 1014 Score = 119 bits (60), Expect = 8e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 316 gcccaagttccaggactcgaggtgggtcaacgggacctgggacctcagccggttcggcaa 375 ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| | Sbjct: 341 gcccaagttccgggactcgaggtgggtcaacgggacgtgggacctcaggcagttcg---a 397 Query: 376 caccggcggcgccgtcgactgggacgccgtcatcgacgccgaggcc 421 | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 398 gaagggcggcgccgtcgactgggacgccgtcatagacgccgaggcc 443 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 41 atggccatggcgacctccaccttctcccc 69 ||||||||||||||||||||||||||||| Sbjct: 73 atggccatggcgacctccaccttctcccc 101
>dbj|AK071006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I12, full insert sequence Length = 1096 Score = 119 bits (60), Expect = 8e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 316 gcccaagttccaggactcgaggtgggtcaacgggacctgggacctcagccggttcggcaa 375 ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| | Sbjct: 342 gcccaagttccgggactcgaggtgggtcaacgggacgtgggacctcaggcagttcg---a 398 Query: 376 caccggcggcgccgtcgactgggacgccgtcatcgacgccgaggcc 421 | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 399 gaagggcggcgccgtcgactgggacgccgtcatagacgccgaggcc 444 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 41 atggccatggcgacctccaccttctcccc 69 ||||||||||||||||||||||||||||| Sbjct: 73 atggccatggcgacctccaccttctcccc 101
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 7e-21 Identities = 90/101 (89%), Gaps = 3/101 (2%) Strand = Plus / Plus Query: 316 gcccaagttccaggactcgaggtgggtcaacgggacctgggacctcagccggttcggcaa 375 ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| | Sbjct: 1345018 gcccaagttccgggactcgaggtgggtcaacgggacgtgggacctcaggcagttcg---a 1345074 Query: 376 caccggcggcgccgtcgactgggacgccgtcatcgacgccg 416 | ||||||||||||||||||||||||||||| ||||||| Sbjct: 1345075 gaagggcggcgccgtcgactgggacgccgtcatagacgccg 1345115 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 41 atggccatggcgacctccaccttctcccc 69 ||||||||||||||||||||||||||||| Sbjct: 1344749 atggccatggcgacctccaccttctcccc 1344777 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 241 ctccgccgctcccgctgctccggtcgccgct 271 |||||||||| |||||||||||||||||||| Sbjct: 23431524 ctccgccgctgccgctgctccggtcgccgct 23431554 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 5964808 ggttcggcaacaccggcggcgcc 5964786
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 109 bits (55), Expect = 7e-21 Identities = 90/101 (89%), Gaps = 3/101 (2%) Strand = Plus / Plus Query: 316 gcccaagttccaggactcgaggtgggtcaacgggacctgggacctcagccggttcggcaa 375 ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| | Sbjct: 26290 gcccaagttccgggactcgaggtgggtcaacgggacgtgggacctcaggcagttcg---a 26346 Query: 376 caccggcggcgccgtcgactgggacgccgtcatcgacgccg 416 | ||||||||||||||||||||||||||||| ||||||| Sbjct: 26347 gaagggcggcgccgtcgactgggacgccgtcatagacgccg 26387 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 41 atggccatggcgacctccaccttctcccc 69 ||||||||||||||||||||||||||||| Sbjct: 26021 atggccatggcgacctccaccttctcccc 26049
>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0038P01 Length = 148506 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 241 ctccgccgctcccgctgctccggtcgccgct 271 |||||||||| |||||||||||||||||||| Sbjct: 144599 ctccgccgctgccgctgctccggtcgccgct 144629
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 241 ctccgccgctcccgctgctccggtcgccgct 271 |||||||||| |||||||||||||||||||| Sbjct: 50199 ctccgccgctgccgctgctccggtcgccgct 50229
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 382 cggcgccgtcgactgggacgccgtc 406 ||||||||||||||||||||||||| Sbjct: 237349 cggcgccgtcgactgggacgccgtc 237373
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 93113 ggttcggcaacaccggcggcgcc 93135
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 24096134 ggttcggcaacaccggcggcgcc 24096156
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 9367780 ggttcggcaacaccggcggcgcc 9367802 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ccgctgccgccactccggtcgccgc 291 ||||||||||| ||||||||||||| Sbjct: 14349987 ccgctgccgccgctccggtcgccgc 14350011 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 12039360 ccgccgctcccgctactccggccgccgct 12039388 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 11927057 ccgccgctcccgctactccggccgccgct 11927085
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 143029 ggttcggcaacaccggcggcgcc 143007
>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete sequence Length = 90767 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 88730 ggttcggcaacaccggcggcgcc 88752
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 9367665 ggttcggcaacaccggcggcgcc 9367687 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ccgctgccgccactccggtcgccgc 291 ||||||||||| ||||||||||||| Sbjct: 14304269 ccgctgccgccgctccggtcgccgc 14304293 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 11955895 ccgccgctcccgctactccggccgccgct 11955923 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 11937843 ccgccgctcccgctactccggccgccgct 11937815
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 366 ggttcggcaacaccggcggcgcc 388 ||||||||||||||||||||||| Sbjct: 71275 ggttcggcaacaccggcggcgcc 71253
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 ccgctgctccggtcgccgctgccgcc 277 |||||||||||| ||||||||||||| Sbjct: 3548793 ccgctgctccgggcgccgctgccgcc 3548768
>ref|XM_476840.1| Oryza sativa (japonica cultivar-group), mRNA Length = 603 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 187 ccgccgctcccgctactccggccgccgct 215
>gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0010H19, complete sequence Length = 162902 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 162811 ccgccgctcccgctactccggccgccgct 162783 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 50234 ccgccgctcccgctactccggccgccgct 50262
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073C10, complete sequence Length = 165350 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 162791 ccgccgcttccgctactccggtcgccgct 162763 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 153344 ccgccgcttccgctactccggtcgccgct 153316 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 143880 ccgccgcttccgctactccggtcgccgct 143852
>gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086E02, complete sequence Length = 150474 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 42769 ccgccgcttccgctactccggtcgccgct 42741 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 33322 ccgccgcttccgctactccggtcgccgct 33294 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 23858 ccgccgcttccgctactccggtcgccgct 23830
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 cgccgcggccaaggccgaggcggtg 310 |||||||||||||| |||||||||| Sbjct: 156317 cgccgcggccaaggacgaggcggtg 156293
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 43634 ccgccgctcccgctactccggccgccgct 43606
>gb|BC104201.1| Homo sapiens neural precursor cell expressed, developmentally down-regulated 8, mRNA (cDNA clone MGC:125897 IMAGE:40031351), complete cds Length = 421 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctccggtcgccgctgccgcc 277 ||||||||||||||||||||| Sbjct: 41 gctccggtcgccgctgccgcc 21
>gb|BC104664.1| Homo sapiens neural precursor cell expressed, developmentally down-regulated 8, mRNA (cDNA clone MGC:104393 IMAGE:6560920), complete cds Length = 640 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctccggtcgccgctgccgcc 277 ||||||||||||||||||||| Sbjct: 57 gctccggtcgccgctgccgcc 37
>gb|BC104200.1| Homo sapiens neural precursor cell expressed, developmentally down-regulated 8, mRNA (cDNA clone MGC:125896 IMAGE:40031350), complete cds Length = 421 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctccggtcgccgctgccgcc 277 ||||||||||||||||||||| Sbjct: 41 gctccggtcgccgctgccgcc 21
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 115827 ccgccgcttccgctactccggtcgccgct 115855 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 94380 ccgccgcttccgctactccggtcgccgct 94408
>gb|AC137003.3| Oryza sativa (japonica cultivar-group) Chromosome 5 BAC clone OSJNBb0069G11, complete sequence Length = 174844 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 96594 ccgccgctcccgctactccggccgccgct 96566
>gb|AY596576.1| Saccharum officinarum clone SCCCLR1065E11, complete sequence Length = 850 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 cgccgcccaagccggcggaggcgga 216 ||||||| ||||||||||||||||| Sbjct: 416 cgccgccgaagccggcggaggcgga 440
>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12, complete sequence Length = 139627 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 63042 ccgccgctcccgctcctccggccgccgct 63070
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 ||||| |||||||| |||||||||||||| Sbjct: 264958 ccgcctctcccgctactccggtcgccgct 264986 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 ttcggcaacaccggcggcgccgtc 391 |||||||||| ||||||||||||| Sbjct: 33209478 ttcggcaacaacggcggcgccgtc 33209455 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccggcggaggcggatccctccccc 226 ||||||||||||| |||||||||| Sbjct: 20424874 ccggcggaggcggctccctccccc 20424851 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cgccgctgccgccactccgg 284 |||||||||||||||||||| Sbjct: 3951401 cgccgctgccgccactccgg 3951420
>gb|BC064899.1| Homo sapiens cDNA clone IMAGE:6008187, partial cds Length = 1202 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctccggtcgccgctgccgcc 277 ||||||||||||||||||||| Sbjct: 41 gctccggtcgccgctgccgcc 21
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 13587 ccgccgcttccgctactccggtcgccgct 13615
>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0039F06, complete sequence Length = 133022 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 26976 ccgccgctcccgctactccggccgccgct 26948
>emb|CR691464.2|CNS0FWHG Tetraodon nigroviridis full-length cDNA Length = 1233 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 188 gaggcgccgcccaagccggcggaggcgga 216 ||||| ||||||||||||| ||||||||| Sbjct: 130 gaggctccgcccaagccggaggaggcgga 102
>emb|AL133507.8| Human DNA sequence from clone RP11-482O9 on chromosome 6 Contains the 3' end of the SLC26A8 gene for solute carrier family 26 member 8, complete sequence Length = 55001 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 agctcagctcagctcacttca 27 ||||||||||||||||||||| Sbjct: 26673 agctcagctcagctcacttca 26653
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 cgcggccaaggccgaggcggt 309 ||||||||||||||||||||| Sbjct: 131806 cgcggccaaggccgaggcggt 131826
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 ||||| |||||||| |||||||||||||| Sbjct: 102025 ccgcctctcccgctactccggtcgccgct 102053
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 ggccgaggcggtggcgtcgcccaag 322 ||||||||||||||||||| ||||| Sbjct: 724890 ggccgaggcggtggcgtcggccaag 724866 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcgccgcggccaaggccgag 304 |||||||||||||||||||| Sbjct: 4243893 tcgccgcggccaaggccgag 4243912
>ref|NM_006156.1| Homo sapiens neural precursor cell expressed, developmentally down-regulated 8 (NEDD8), mRNA Length = 605 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctccggtcgccgctgccgcc 277 ||||||||||||||||||||| Sbjct: 52 gctccggtcgccgctgccgcc 32
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cccgtcgaggcgccgcccaag 202 ||||||||||||||||||||| Sbjct: 70331 cccgtcgaggcgccgcccaag 70311
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 26210693 ccgccgcttccgctactccggtcgccgct 26210721 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 26190058 ccgccgcttccgctactccggtcgccgct 26190086 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 24178450 ccgccgctcccgctactccggccgccgct 24178478 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 11257276 ccgccgctcccgctactccggccgccgct 11257248 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 cgccgcggccaaggccgaggcggtg 310 |||||||||||||| |||||||||| Sbjct: 3788645 cgccgcggccaaggacgaggcggtg 3788621
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 17217346 ccgccgctcccgctactccggccgccgct 17217374 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 11007985 ccgccgctcccgctactccggccgccgct 11008013 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 9944536 ccgccgcttccgctactccggtcgccgct 9944564 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 9935150 ccgccgcttccgctactccggtcgccgct 9935178 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccg 262 |||||||||||||||||||| Sbjct: 7619880 ccgccgctcccgctgctccg 7619899
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 18033397 ccgccgctcccgctactccggccgccgct 18033425 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 15870428 ccgccgctcccgctactccggccgccgct 15870456 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgctgctccggtcgccgct 271 |||||||||||||||||||| Sbjct: 14027680 ccgctgctccggtcgccgct 14027661
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 4159697 ccgccgctcccgctactccggccgccgct 4159725 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 gggacgccgtcatcgacgccgagg 419 ||||||||||| |||||||||||| Sbjct: 18852989 gggacgccgtcttcgacgccgagg 18852966 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 244 cgccgctcccgctgctccggtcgccgct 271 ||||||||||||| |||||| ||||||| Sbjct: 14169102 cgccgctcccgctactccggccgccgct 14169129 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcggcaacaccggcggcgcc 388 |||||||||||||||||||| Sbjct: 7468670 tcggcaacaccggcggcgcc 7468651
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 11618607 ccgccgctcccgctcctccggccgccgct 11618635 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 10479778 ccgccgctcccgctactccggccgccgct 10479750 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 10367201 ccgccgctcccgctactccggccgccgct 10367229 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 3964904 ccgccgcttccgctactccggtcgccgct 3964876 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 3955457 ccgccgcttccgctactccggtcgccgct 3955429 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 3945993 ccgccgcttccgctactccggtcgccgct 3945965
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 ||||| |||||||| |||||||||||||| Sbjct: 264958 ccgcctctcccgctactccggtcgccgct 264986 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 ttcggcaacaccggcggcgccgtc 391 |||||||||| ||||||||||||| Sbjct: 33299988 ttcggcaacaacggcggcgccgtc 33299965 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccggcggaggcggatccctccccc 226 ||||||||||||| |||||||||| Sbjct: 20417903 ccggcggaggcggctccctccccc 20417880 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cgccgctgccgccactccgg 284 |||||||||||||||||||| Sbjct: 3951512 cgccgctgccgccactccgg 3951531
>dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_C03 Length = 112383 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 33792 ccgccgctcccgctactccggccgccgct 33820
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 158103 ccgccgctcccgctactccggccgccgct 158131
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 4218 ccgccgctcccgctactccggccgccgct 4246
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 43319 ccgccgctcccgctactccggccgccgct 43347
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 99983 ccgccgcttccgctactccggtcgccgct 100011 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 90597 ccgccgcttccgctactccggtcgccgct 90625
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 127223 ccgccgcttccgctactccggtcgccgct 127251 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 117837 ccgccgcttccgctactccggtcgccgct 117865
>dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012O03 Length = 141860 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 50471 ccgccgctcccgctactccggccgccgct 50499
>dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0013H03 Length = 152998 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 118432 ccgccgctcccgctactccggccgccgct 118460
>dbj|AK121851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101M14, full insert sequence Length = 3448 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 cgccgcggccaaggccgaggcggtg 310 |||||||||||||| |||||||||| Sbjct: 344 cgccgcggccaaggacgaggcggtg 368
>dbj|AK122056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114L01, full insert sequence Length = 3438 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 cgccgcggccaaggccgaggcggtg 310 |||||||||||||| |||||||||| Sbjct: 334 cgccgcggccaaggacgaggcggtg 358
>emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-934B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196533 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctccggtcgccgctgccgcc 277 ||||||||||||||||||||| Sbjct: 157640 gctccggtcgccgctgccgcc 157620
>dbj|AP002370.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-160H12, complete sequence Length = 174697 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 gctcagctcacttcagcagctcccc 37 ||||||||| ||||||||||||||| Sbjct: 40875 gctcagctcccttcagcagctcccc 40899
>dbj|AP000773.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-97P20, complete sequences Length = 170434 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 gctcagctcacttcagcagctcccc 37 ||||||||| ||||||||||||||| Sbjct: 135681 gctcagctcccttcagcagctcccc 135705
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 26526196 ccgccgcttccgctactccggtcgccgct 26526224 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||| ||||| |||||||||||||| Sbjct: 26504750 ccgccgcttccgctactccggtcgccgct 26504778 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 24490119 ccgccgctcccgctactccggccgccgct 24490147 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 11336465 ccgccgctcccgctactccggccgccgct 11336437 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 cgccgcggccaaggccgaggcggtg 310 |||||||||||||| |||||||||| Sbjct: 3797339 cgccgcggccaaggacgaggcggtg 3797315
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134370 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ccgctgccgccactccggtcgccgc 291 ||||||||||| ||||||||||||| Sbjct: 57191 ccgctgccgccgctccggtcgccgc 57215
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1090H08 Length = 200720 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccggtcgccgct 271 |||||||||||||| |||||| ||||||| Sbjct: 37193 ccgccgctcccgctactccggccgccgct 37221
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gcgccgtcgactgggacgccg 404 ||||||||||||||||||||| Sbjct: 1797056 gcgccgtcgactgggacgccg 1797076
>dbj|D23662.1|HUMULP Homo sapiens mRNA for ubiquitin-like protein, complete cds Length = 605 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctccggtcgccgctgccgcc 277 ||||||||||||||||||||| Sbjct: 52 gctccggtcgccgctgccgcc 32
>ref|XM_469988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 ttcggcaacaccggcggcgccgtc 391 |||||||||| ||||||||||||| Sbjct: 322 ttcggcaacaacggcggcgccgtc 345
>ref|NM_192016.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1875 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 ccgtcgaggcgccgcccaagccgg 206 ||||||| |||||||||||||||| Sbjct: 1766 ccgtcgacgcgccgcccaagccgg 1789
>ref|XM_478257.1| Oryza sativa (japonica cultivar-group), mRNA Length = 270 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 gggacgccgtcatcgacgccgagg 419 ||||||||||| |||||||||||| Sbjct: 203 gggacgccgtcttcgacgccgagg 226
>ref|NM_186692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 444 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 tcggcaacaccggcggcgcc 388 |||||||||||||||||||| Sbjct: 188 tcggcaacaccggcggcgcc 207
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 tccggtcgccgcggccaaggccga 303 |||||||||||||||| ||||||| Sbjct: 124300 tccggtcgccgcggccgaggccga 124277
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gtcgccgcggccaaggccga 303 |||||||||||||||||||| Sbjct: 1733502 gtcgccgcggccaaggccga 1733521
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcg 266 |||||||||||||| ||||||||| Sbjct: 64374 ccgccgctcccgctactccggtcg 64351
>ref|XM_536172.2| PREDICTED: Canis familiaris similar to threonyl-tRNA synthetase-like 2, transcript variant 1 (LOC479019), mRNA Length = 2426 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggccgaggcggtggcgtcgc 317 |||||||||||||||||||| Sbjct: 6 ggccgaggcggtggcgtcgc 25
>ref|XM_852180.1| PREDICTED: Canis familiaris similar to threonyl-tRNA synthetase-like 2, transcript variant 5 (LOC479019), mRNA Length = 2064 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggccgaggcggtggcgtcgc 317 |||||||||||||||||||| Sbjct: 6 ggccgaggcggtggcgtcgc 25
>ref|XM_852138.1| PREDICTED: Canis familiaris similar to threonyl-tRNA synthetase-like 2, transcript variant 4 (LOC479019), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggccgaggcggtggcgtcgc 317 |||||||||||||||||||| Sbjct: 6 ggccgaggcggtggcgtcgc 25
>ref|XM_852091.1| PREDICTED: Canis familiaris similar to threonyl-tRNA synthetase-like 2, transcript variant 3 (LOC479019), mRNA Length = 2153 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggccgaggcggtggcgtcgc 317 |||||||||||||||||||| Sbjct: 6 ggccgaggcggtggcgtcgc 25
>ref|XM_852048.1| PREDICTED: Canis familiaris similar to threonyl-tRNA synthetase-like 2, transcript variant 2 (LOC479019), mRNA Length = 3019 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggccgaggcggtggcgtcgc 317 |||||||||||||||||||| Sbjct: 6 ggccgaggcggtggcgtcgc 25
>gb|U97194.4| Caenorhabditis elegans cosmid C37A2, complete sequence Length = 27406 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 acttcagcagctcccccaca 41 |||||||||||||||||||| Sbjct: 22848 acttcagcagctcccccaca 22867
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cggccaaggccgaggcggtg 310 |||||||||||||||||||| Sbjct: 3881682 cggccaaggccgaggcggtg 3881663
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tccggtcgccgcggccaagg 299 |||||||||||||||||||| Sbjct: 10758 tccggtcgccgcggccaagg 10777
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tccggtcgccgcggccaagg 299 |||||||||||||||||||| Sbjct: 10818 tccggtcgccgcggccaagg 10837
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tccggtcgccgcggccaagg 299 |||||||||||||||||||| Sbjct: 10773 tccggtcgccgcggccaagg 10792
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcg 266 |||||||||||||| ||||||||| Sbjct: 96912 ccgccgctcccgctactccggtcg 96889
>gb|AC010115.6| Drosophila melanogaster 3L BAC RP98-16I16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180821 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ggagctcagctcagctcacttcag 28 |||||||||||||||||| ||||| Sbjct: 125972 ggagctcagctcagctcagttcag 125995
>gb|AC113339.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0047B19, from chromosome 10, complete sequence Length = 137015 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gccgccactccggtcgccgc 291 |||||||||||||||||||| Sbjct: 70470 gccgccactccggtcgccgc 70451
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cgccgctgccgccactccgg 284 |||||||||||||||||||| Sbjct: 147967 cgccgctgccgccactccgg 147948
>gb|AC154859.2| Mus musculus BAC clone RP23-14B14 from chromosome 16, complete sequence Length = 200016 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ccatggcgacctccaccttctccc 68 ||||||| |||||||||||||||| Sbjct: 191771 ccatggcaacctccaccttctccc 191748
>ref|NM_059544.2| Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-20) (pqn-20) mRNA, complete cds Length = 3862 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 acttcagcagctcccccaca 41 |||||||||||||||||||| Sbjct: 3682 acttcagcagctcccccaca 3701
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gccgccactccggtcgccgc 291 |||||||||||||||||||| Sbjct: 7627476 gccgccactccggtcgccgc 7627457
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgctgctccggtcgccgct 271 |||||||||||||||||||| Sbjct: 15484296 ccgctgctccggtcgccgct 15484315 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccg 262 |||||||||||||||||||| Sbjct: 14932415 ccgccgctcccgctgctccg 14932434
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 ccgtcgaggcgccgcccaagccgg 206 ||||||| |||||||||||||||| Sbjct: 27835458 ccgtcgacgcgccgcccaagccgg 27835481 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcg 266 |||||||||||||| ||||||||| Sbjct: 8100261 ccgccgctcccgctactccggtcg 8100238
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cgccgctgccgccactccgg 284 |||||||||||||||||||| Sbjct: 157874 cgccgctgccgccactccgg 157893
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 ttcggcaacaccggcggcgccgtc 391 |||||||||| ||||||||||||| Sbjct: 35077 ttcggcaacaacggcggcgccgtc 35100
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccggcggaggcggatccctccccc 226 ||||||||||||| |||||||||| Sbjct: 69174 ccggcggaggcggctccctccccc 69151
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 cggcggcgccgtcgactgggacgccgtc 406 ||||| |||| ||||||||||||||||| Sbjct: 535837 cggcgtcgccatcgactgggacgccgtc 535810
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcaacaccggcggcgccg 389 |||||||||||||||||||| Sbjct: 374958 cggcaacaccggcggcgccg 374977
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ccgccgctcccgctgctccggtcg 266 |||||||||||||| ||||||||| Sbjct: 17979 ccgccgctcccgctactccggtcg 17956
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 ccgtcgaggcgccgcccaagccgg 206 ||||||| |||||||||||||||| Sbjct: 22139 ccgtcgacgcgccgcccaagccgg 22162
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccaaggccgaggcggtggc 312 |||||||||||||||||||| Sbjct: 3556475 gccaaggccgaggcggtggc 3556456
>dbj|AP005916.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066M12 Length = 162198 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccg 262 |||||||||||||||||||| Sbjct: 128295 ccgccgctcccgctgctccg 128314
>dbj|AP004755.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0543C04 Length = 147889 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ccgccgctcccgctgctccg 262 |||||||||||||||||||| Sbjct: 30476 ccgccgctcccgctgctccg 30495
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgctgctccggtcgccgct 271 |||||||||||||||||||| Sbjct: 151811 ccgctgctccggtcgccgct 151830
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 244 cgccgctcccgctgctccggtcgccgct 271 ||||||||||||| |||||| ||||||| Sbjct: 53983 cgccgctcccgctactccggccgccgct 54010
>gb|AE005020.1| Halobacterium sp. NRC-1 section 51 of 170 of the complete genome Length = 9823 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cggttcggcaacaccggcgg 384 |||||||||||||||||||| Sbjct: 6370 cggttcggcaacaccggcgg 6389
>dbj|AP004661.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048E12 Length = 152543 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgctgctccggtcgccgct 271 |||||||||||||||||||| Sbjct: 59571 ccgctgctccggtcgccgct 59552
>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_F06 Length = 104419 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 gggacgccgtcatcgacgccgagg 419 ||||||||||| |||||||||||| Sbjct: 53175 gggacgccgtcttcgacgccgagg 53152
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcggcaacaccggcggcgcc 388 |||||||||||||||||||| Sbjct: 46984 tcggcaacaccggcggcgcc 46965
>dbj|AK106997.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-B11, full insert sequence Length = 1991 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 ccgtcgaggcgccgcccaagccgg 206 ||||||| |||||||||||||||| Sbjct: 1800 ccgtcgacgcgccgcccaagccgg 1823
>gb|AC156018.2| Mus musculus BAC clone RP24-160I18 from chromosome 16, complete sequence Length = 162673 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ccatggcgacctccaccttctccc 68 ||||||| |||||||||||||||| Sbjct: 47323 ccatggcaacctccaccttctccc 47300
>gb|AE003560.3| Drosophila melanogaster chromosome 3L, section 25 of 83 of the complete sequence Length = 285494 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ggagctcagctcagctcacttcag 28 |||||||||||||||||| ||||| Sbjct: 259444 ggagctcagctcagctcagttcag 259421
>emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chromosome 2, complete sequence Length = 208470 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cacttcagcagctcccccac 40 |||||||||||||||||||| Sbjct: 38150 cacttcagcagctcccccac 38131
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gccgccactccggtcgccgc 291 |||||||||||||||||||| Sbjct: 7631675 gccgccactccggtcgccgc 7631656
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 tcggcaacaccggcggcgcc 388 |||||||||||||||||||| Sbjct: 3204770 tcggcaacaccggcggcgcc 3204789
>gb|AY459313.1| Uncultured euryarchaeote clone MCR-F1SU-12 methyl-coenzyme M reductase alpha subunit (mcrA) gene, partial cds Length = 470 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cggtcgccgctgccgccact 280 |||||||||||||||||||| Sbjct: 236 cggtcgccgctgccgccact 255
>gb|AY458419.1| Uncultured euryarchaeote clone MCR-F1SP-38 methyl-coenzyme M reductase alpha subunit (mcrA) gene, partial cds Length = 468 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cggtcgccgctgccgccact 280 |||||||||||||||||||| Sbjct: 236 cggtcgccgctgccgccact 255
>gb|AY458415.1| Uncultured euryarchaeote clone MCR-F1SP-26 methyl-coenzyme M reductase alpha subunit (mcrA) gene, partial cds Length = 470 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cggtcgccgctgccgccact 280 |||||||||||||||||||| Sbjct: 236 cggtcgccgctgccgccact 255
>gb|U04837.1|SVU04837 Streptomyces venezuelae RecA protein gene, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cgcggccaaggccgaggcgg 308 |||||||||||||||||||| Sbjct: 1076 cgcggccaaggccgaggcgg 1095
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 379 cggcggcgccgtcgactgggacgccgtc 406 ||||| |||| ||||||||||||||||| Sbjct: 29021 cggcgtcgccatcgactgggacgccgtc 29048 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,875,269 Number of Sequences: 3902068 Number of extensions: 2875269 Number of successful extensions: 72395 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68465 Number of HSP's gapped (non-prelim): 3927 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
