| Clone Name | baet22a04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 167 bits (84), Expect = 4e-38 Identities = 123/136 (90%) Strand = Plus / Minus Query: 134 ggggcgacggcaacggcgtgtacgagccgtgcgcggacgcgacggtgagccggggcgacg 193 |||||||| ||||||||||||||||||||||||||||||| ||||| || || |||| Sbjct: 46819 ggggcgacaccaacggcgtgtacgagccgtgcgcggacgcggcggtgcagcgcggggacg 46760 Query: 194 ggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcggcgtgcagc 253 ||||||||||||| ||||||||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 46759 ggttcaccttcggcgtggccttcgcggcgcgcggcgacttcttctccggcggcgtgcagc 46700 Query: 254 tctccccctgcgacgg 269 |||||||||||||||| Sbjct: 46699 tctccccctgcgacgg 46684 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 291 cgccaagctcgcgctcttccgccccaccgtcgacgagatttcgctcctcaccgtcaacgc 350 ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | Sbjct: 46659 cgccaagctcgcggtgttccgccccgaggtcgacgagatttcgctcctcaccgtcaacac 46600 Query: 351 ctccggcgccgg 362 ||||| |||||| Sbjct: 46599 ctccgccgccgg 46588
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 167 bits (84), Expect = 4e-38 Identities = 123/136 (90%) Strand = Plus / Minus Query: 134 ggggcgacggcaacggcgtgtacgagccgtgcgcggacgcgacggtgagccggggcgacg 193 |||||||| ||||||||||||||||||||||||||||||| ||||| || || |||| Sbjct: 32394691 ggggcgacaccaacggcgtgtacgagccgtgcgcggacgcggcggtgcagcgcggggacg 32394632 Query: 194 ggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcggcgtgcagc 253 ||||||||||||| ||||||||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 32394631 ggttcaccttcggcgtggccttcgcggcgcgcggcgacttcttctccggcggcgtgcagc 32394572 Query: 254 tctccccctgcgacgg 269 |||||||||||||||| Sbjct: 32394571 tctccccctgcgacgg 32394556 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 291 cgccaagctcgcgctcttccgccccaccgtcgacgagatttcgctcctcaccgtcaacgc 350 ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | Sbjct: 32394531 cgccaagctcgcggtgttccgccccgaggtcgacgagatttcgctcctcaccgtcaacac 32394472 Query: 351 ctccggcgccgg 362 ||||| |||||| Sbjct: 32394471 ctccgccgccgg 32394460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 129/162 (79%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 190 gacgggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcgg---c 246 |||||||||| ||||||| | |||||||| | || |||||| | ||||||||| | Sbjct: 24810255 gacgggttcagcttcgggatcgccttcgccaccctcggcgccttctactccggcggatcc 24810196 Query: 247 gtgcagctctccccctgcgacggccgcctcccccttcagaacaccgccaagctcgcgctc 306 ||||||||||||||||||||| |||||||| ||| | ||| | ||||||| || Sbjct: 24810195 gtgcagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtc 24810136 Query: 307 ttccgccccaccgtcgacgagatttcgctcctcaccgtcaac 348 |||||||||| ||||||||||| || ||||||||| ||||| Sbjct: 24810135 ttccgccccaaggtcgacgagatctccctcctcaccatcaac 24810094 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 tcaccgtcaacgcctccggcgccg 361 |||||||||||| ||||||||||| Sbjct: 12704160 tcaccgtcaacggctccggcgccg 12704183
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 167 bits (84), Expect = 4e-38 Identities = 123/136 (90%) Strand = Plus / Minus Query: 134 ggggcgacggcaacggcgtgtacgagccgtgcgcggacgcgacggtgagccggggcgacg 193 |||||||| ||||||||||||||||||||||||||||||| ||||| || || |||| Sbjct: 32485201 ggggcgacaccaacggcgtgtacgagccgtgcgcggacgcggcggtgcagcgcggggacg 32485142 Query: 194 ggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcggcgtgcagc 253 ||||||||||||| ||||||||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 32485141 ggttcaccttcggcgtggccttcgcggcgcgcggcgacttcttctccggcggcgtgcagc 32485082 Query: 254 tctccccctgcgacgg 269 |||||||||||||||| Sbjct: 32485081 tctccccctgcgacgg 32485066 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 291 cgccaagctcgcgctcttccgccccaccgtcgacgagatttcgctcctcaccgtcaacgc 350 ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | Sbjct: 32485041 cgccaagctcgcggtgttccgccccgaggtcgacgagatttcgctcctcaccgtcaacac 32484982 Query: 351 ctccggcgccgg 362 ||||| |||||| Sbjct: 32484981 ctccgccgccgg 32484970 Score = 56.0 bits (28), Expect = 1e-04 Identities = 129/162 (79%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 190 gacgggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcgg---c 246 |||||||||| ||||||| | |||||||| | || |||||| | ||||||||| | Sbjct: 24901578 gacgggttcagcttcgggatcgccttcgccaccctcggcgccttctactccggcggatcc 24901519 Query: 247 gtgcagctctccccctgcgacggccgcctcccccttcagaacaccgccaagctcgcgctc 306 ||||||||||||||||||||| |||||||| ||| | ||| | ||||||| || Sbjct: 24901518 gtgcagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtc 24901459 Query: 307 ttccgccccaccgtcgacgagatttcgctcctcaccgtcaac 348 |||||||||| ||||||||||| || ||||||||| ||||| Sbjct: 24901458 ttccgccccaaggtcgacgagatctccctcctcaccatcaac 24901417 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 tcaccgtcaacgcctccggcgccg 361 |||||||||||| ||||||||||| Sbjct: 12700923 tcaccgtcaacggctccggcgccg 12700946
>dbj|AK110858.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D03, full insert sequence Length = 866 Score = 167 bits (84), Expect = 4e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 134 ggggcgacggcaacggcgtgtacgagccgtgcgcggacgcgacggtgagccggggcgacg 193 |||||||| ||||||||||||||||||||||||||||||| ||||| || || |||| Sbjct: 188 ggggcgacaccaacggcgtgtacgagccgtgcgcggacgcggcggtgcagcgcggggacg 247 Query: 194 ggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcggcgtgcagc 253 ||||||||||||| ||||||||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 248 ggttcaccttcggcgtggccttcgcggcgcgcggcgacttcttctccggcggcgtgcagc 307 Query: 254 tctccccctgcgacgg 269 |||||||||||||||| Sbjct: 308 tctccccctgcgacgg 323 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 291 cgccaagctcgcgctcttccgccccaccgtcgacgagatttcgctcctcaccgtcaacgc 350 ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | Sbjct: 348 cgccaagctcgcggtgttccgccccgaggtcgacgagatttcgctcctcaccgtcaacac 407 Query: 351 ctccggcgccgg 362 ||||| |||||| Sbjct: 408 ctccgccgccgg 419
>gb|BT016730.1| Zea mays clone Contig563 mRNA sequence Length = 1046 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 190 gacgggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcggcgtg 249 ||||| |||||||||||||||| ||||||||| | ||||||| ||||||||| | Sbjct: 273 gacggcttcaccttcggggtggtcttcgcgggatacaacgccttcttctccggcaacaca 332 Query: 250 cagctctccccctgcgacggccgcctc 276 |||||||||||||||||| |||||||| Sbjct: 333 cagctctccccctgcgaccgccgcctc 359 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 296 agctcgcgctcttccgccccaccgtcgacgagatttcgctcctcaccgtcaac 348 ||||||| |||||||||||| ||||||||||| || ||||||||| ||||| Sbjct: 379 agctcgccgtcttccgccccaaggtcgacgagatctccctcctcaccatcaac 431
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 56.0 bits (28), Expect = 1e-04 Identities = 129/162 (79%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 190 gacgggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcgg---c 246 |||||||||| ||||||| | |||||||| | || |||||| | ||||||||| | Sbjct: 45490 gacgggttcagcttcgggatcgccttcgccaccctcggcgccttctactccggcggatcc 45431 Query: 247 gtgcagctctccccctgcgacggccgcctcccccttcagaacaccgccaagctcgcgctc 306 ||||||||||||||||||||| |||||||| ||| | ||| | ||||||| || Sbjct: 45430 gtgcagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtc 45371 Query: 307 ttccgccccaccgtcgacgagatttcgctcctcaccgtcaac 348 |||||||||| ||||||||||| || ||||||||| ||||| Sbjct: 45370 ttccgccccaaggtcgacgagatctccctcctcaccatcaac 45329
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 56.0 bits (28), Expect = 1e-04 Identities = 129/162 (79%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 190 gacgggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcgg---c 246 |||||||||| ||||||| | |||||||| | || |||||| | ||||||||| | Sbjct: 97206 gacgggttcagcttcgggatcgccttcgccaccctcggcgccttctactccggcggatcc 97147 Query: 247 gtgcagctctccccctgcgacggccgcctcccccttcagaacaccgccaagctcgcgctc 306 ||||||||||||||||||||| |||||||| ||| | ||| | ||||||| || Sbjct: 97146 gtgcagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtc 97087 Query: 307 ttccgccccaccgtcgacgagatttcgctcctcaccgtcaac 348 |||||||||| ||||||||||| || ||||||||| ||||| Sbjct: 97086 ttccgccccaaggtcgacgagatctccctcctcaccatcaac 97045
>dbj|AK070243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047G07, full insert sequence Length = 1146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 129/162 (79%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 190 gacgggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcgg---c 246 |||||||||| ||||||| | |||||||| | || |||||| | ||||||||| | Sbjct: 197 gacgggttcagcttcgggatcgccttcgccaccctcggcgccttctactccggcggatcc 256 Query: 247 gtgcagctctccccctgcgacggccgcctcccccttcagaacaccgccaagctcgcgctc 306 ||||||||||||||||||||| |||||||| ||| | ||| | ||||||| || Sbjct: 257 gtgcagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtc 316 Query: 307 ttccgccccaccgtcgacgagatttcgctcctcaccgtcaac 348 |||||||||| ||||||||||| || ||||||||| ||||| Sbjct: 317 ttccgccccaaggtcgacgagatctccctcctcaccatcaac 358
>dbj|AK061238.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C04, full insert sequence Length = 1123 Score = 56.0 bits (28), Expect = 1e-04 Identities = 129/162 (79%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 190 gacgggttcaccttcggggtggccttcgcggggcgcgacgcctttttctccggcgg---c 246 |||||||||| ||||||| | |||||||| | || |||||| | ||||||||| | Sbjct: 208 gacgggttcagcttcgggatcgccttcgccaccctcggcgccttctactccggcggatcc 267 Query: 247 gtgcagctctccccctgcgacggccgcctcccccttcagaacaccgccaagctcgcgctc 306 ||||||||||||||||||||| |||||||| ||| | ||| | ||||||| || Sbjct: 268 gtgcagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtc 327 Query: 307 ttccgccccaccgtcgacgagatttcgctcctcaccgtcaac 348 |||||||||| ||||||||||| || ||||||||| ||||| Sbjct: 328 ttccgccccaaggtcgacgagatctccctcctcaccatcaac 369
>emb|CR680894.2|CNS0FOBU Tetraodon nigroviridis full-length cDNA Length = 1242 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 ccttcgtcgtcctcctcatcctc 108 ||||||||||||||||||||||| Sbjct: 616 ccttcgtcgtcctcctcatcctc 594
>emb|CR662952.2|CNS0FAI6 Tetraodon nigroviridis full-length cDNA Length = 1242 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 ccttcgtcgtcctcctcatcctc 108 ||||||||||||||||||||||| Sbjct: 615 ccttcgtcgtcctcctcatcctc 593
>emb|CR658923.2|CNS0F7E9 Tetraodon nigroviridis full-length cDNA Length = 1245 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 ccttcgtcgtcctcctcatcctc 108 ||||||||||||||||||||||| Sbjct: 618 ccttcgtcgtcctcctcatcctc 596
>emb|X16879.1|GGLAMA Chicken mRNA for lamin A Length = 2388 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcg 109 ||||||||||||||||||||||| Sbjct: 1876 cttcgtcgtcctcctcatcctcg 1854
>ref|NM_205287.1| Gallus gallus lamin A (LMNA), mRNA Length = 2388 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcg 109 ||||||||||||||||||||||| Sbjct: 1876 cttcgtcgtcctcctcatcctcg 1854
>gb|AE001412.2| Plasmodium falciparum 3D7 chromosome 2 section 49 of 73 of the complete sequence Length = 12028 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctc 108 |||||||||||||||||||||| Sbjct: 8952 cttcgtcgtcctcctcatcctc 8931
>ref|XM_653801.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1289.2), mRNA Length = 2715 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 tcgtcgtcctcctcatcctcgc 110 |||||||||||||||||||||| Sbjct: 1981 tcgtcgtcctcctcatcctcgc 2002
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 cgacggcgacgccgaggcgggc 77 |||||||||||||||||||||| Sbjct: 111901 cgacggcgacgccgaggcgggc 111880
>gb|AY118681.1| Drosophila melanogaster AT10577 full insert cDNA Length = 2030 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctc 108 |||||||||||||||||||||| Sbjct: 696 cttcgtcgtcctcctcatcctc 675
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 gccgccttcgtcgtcctcctcatcctcgcg 111 |||||| |||||||||||||| |||||||| Sbjct: 18637368 gccgccgtcgtcgtcctcctcctcctcgcg 18637397
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 56 cgacggcgacgccgaggcgggcgccg 81 |||||||||||||||||| ||||||| Sbjct: 1689620 cgacggcgacgccgaggctggcgccg 1689595 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 cgcgctcttccgccccaccgtcgacgag 327 |||| ||||||||| ||||||||||||| Sbjct: 188727 cgcgatcttccgccgcaccgtcgacgag 188754
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 gccgccttcgtcgtcctcctcatcctcgcg 111 |||||| |||||||||||||| |||||||| Sbjct: 18563594 gccgccgtcgtcgtcctcctcctcctcgcg 18563623
>emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC OSJNBa0023G11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 180599 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 gccgccttcgtcgtcctcctcatcctcgcg 111 |||||| |||||||||||||| |||||||| Sbjct: 70820 gccgccgtcgtcgtcctcctcctcctcgcg 70849
>ref|XM_482671.1| Oryza sativa (japonica cultivar-group), mRNA Length = 543 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tggcggcaacgacgacggcgacgcc 68 |||||||||||||||||||| |||| Sbjct: 231 tggcggcaacgacgacggcggcgcc 255
>gb|DQ214972.1| Taeniopygia guttata clone 0058P0001D06 eukaryotic translation initiation factor 3 subunit 1 variant 2-like mRNA, complete sequence Length = 882 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgtcgtcctcctcatcctcgc 110 ||||||||||||||||||||| Sbjct: 146 cgtcgtcctcctcatcctcgc 126
>gb|DQ214971.1| Taeniopygia guttata clone 0061P0024E06 eukaryotic translation initiation factor 3 subunit 1 variant 2-like mRNA, complete sequence Length = 820 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgtcgtcctcctcatcctcgc 110 ||||||||||||||||||||| Sbjct: 81 cgtcgtcctcctcatcctcgc 61
>gb|DQ214970.1| Taeniopygia guttata clone 0058P0030G03 eukaryotic translation initiation factor 3 subunit 1 variant 2-like mRNA, complete sequence Length = 875 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgtcgtcctcctcatcctcgc 110 ||||||||||||||||||||| Sbjct: 138 cgtcgtcctcctcatcctcgc 118
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 ggcaacgacgacggcgacgccgaggcggg 76 ||||||||||||| ||||| ||||||||| Sbjct: 20396 ggcaacgacgacgacgacgacgaggcggg 20424
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgacgacggcgacgccgaggcgggc 77 ||||||||||| ||||||||||||| Sbjct: 1202175 cgacgacggcggcgccgaggcgggc 1202151 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 acgacggcgacgccgaggcg 74 |||||||||||||||||||| Sbjct: 2766739 acgacggcgacgccgaggcg 2766720
>ref|XM_369752.1| Magnaporthe grisea 70-15 hypothetical protein (MG06267.4) partial mRNA Length = 540 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctcg 109 ||||||||||||||||||||| Sbjct: 215 tcgtcgtcctcctcatcctcg 195
>ref|XM_606908.2| PREDICTED: Bos taurus similar to CG6451-PA, transcript variant 1 (LOC528485), mRNA Length = 5168 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cgccttcgtcgtcctcctcatcctc 108 |||||||||||||||||||| |||| Sbjct: 3334 cgccttcgtcgtcctcctcaccctc 3310
>ref|XM_876920.1| PREDICTED: Bos taurus similar to CG6451-PA, transcript variant 3 (LOC528485), mRNA Length = 4343 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 cgccttcgtcgtcctcctcatcctc 108 |||||||||||||||||||| |||| Sbjct: 2509 cgccttcgtcgtcctcctcaccctc 2485
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgacgacggcgacgccgaggcgggc 77 ||||||||||| ||||||||||||| Sbjct: 2313899 cgacgacggcggcgccgaggcgggc 2313923 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 acgacggcgacgccgaggcg 74 |||||||||||||||||||| Sbjct: 273546 acgacggcgacgccgaggcg 273565
>gb|AC080008.23| Homo sapiens 3 BAC RP11-615P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197883 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 389 tggtggcctttgcagggaggaagtt 413 |||||||||||| |||||||||||| Sbjct: 71368 tggtggcctttgaagggaggaagtt 71392
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgacgacggcgacgccgaggcgggc 77 ||||||||||| ||||||||||||| Sbjct: 2071192 cgacgacggcggcgccgaggcgggc 2071168 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 acgacggcgacgccgaggcg 74 |||||||||||||||||||| Sbjct: 50858 acgacggcgacgccgaggcg 50877
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cgcgacggcgtccggggcctc 128 ||||||||||||||||||||| Sbjct: 206764 cgcgacggcgtccggggcctc 206744
>gb|AE005767.1| Caulobacter crescentus CB15 section 93 of 359 of the complete genome Length = 7840 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 cgtcaacgcctccggcgccggcgac 366 |||||||||||||||||||| |||| Sbjct: 979 cgtcaacgcctccggcgccgacgac 1003
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cgacgacggcgacgccgaggc 73 ||||||||||||||||||||| Sbjct: 4306697 cgacgacggcgacgccgaggc 4306677
>gb|AF072135.1|AF072135 Caulobacter crescentus hook associated protein I homolog (flaN), flagellar operon, complete sequence and II.1 protein (II.1) genes, complete cds Length = 6943 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 cgtcaacgcctccggcgccggcgac 366 |||||||||||||||||||| |||| Sbjct: 5321 cgtcaacgcctccggcgccgacgac 5345
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctcg 109 ||||||||||||||||||||| Sbjct: 187599 tcgtcgtcctcctcatcctcg 187579
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 ggcaacgacgacggcgacgccgaggcggg 76 ||||||||||||| ||||| ||||||||| Sbjct: 12921480 ggcaacgacgacgacgacgacgaggcggg 12921508
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tggcggcaacgacgacggcgacgcc 68 |||||||||||||||||||| |||| Sbjct: 21798306 tggcggcaacgacgacggcggcgcc 21798330
>ref|NM_214574.1| Strongylocentrotus purpuratus Kruppel/Krox-related gene 1 (Krox1), mRNA Length = 4023 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gccttcgtcgtcctcctcatc 105 ||||||||||||||||||||| Sbjct: 1891 gccttcgtcgtcctcctcatc 1871
>gb|AE004897.1| Pseudomonas aeruginosa PAO1, section 458 of 529 of the complete genome Length = 9985 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 cggcgacgccgaggcgggcgccggc 83 ||||||||||||||| ||||||||| Sbjct: 8580 cggcgacgccgaggctggcgccggc 8604
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 gccgaggcgggcgccggccgccttc 90 ||||||||||||| ||||||||||| Sbjct: 3305781 gccgaggcgggcggcggccgccttc 3305757
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tggcggcaacgacgacggcgacgcc 68 |||||||||||||||||||| |||| Sbjct: 77889 tggcggcaacgacgacggcggcgcc 77913
>ref|XM_311082.2| Anopheles gambiae str. PEST ENSANGP00000017476 (ENSANGG00000014987), partial mRNA Length = 831 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 gcctccgccaggggcgacggc 144 ||||||||||||||||||||| Sbjct: 709 gcctccgccaggggcgacggc 729
>gb|AF102558.2|AF102558 Strongylocentrotus purpuratus Krox1 protein mRNA, complete cds Length = 4023 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gccttcgtcgtcctcctcatc 105 ||||||||||||||||||||| Sbjct: 1891 gccttcgtcgtcctcctcatc 1871
>gb|AY109077.1| Zea mays PCO109955 mRNA sequence Length = 641 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ccatggcggcaacgacgacgg 61 ||||||||||||||||||||| Sbjct: 105 ccatggcggcaacgacgacgg 125
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 ggcaacgacgacggcgacgccgaggcggg 76 ||||||||||||| ||||| ||||||||| Sbjct: 12928820 ggcaacgacgacgacgacgacgaggcggg 12928848
>dbj|AB039333.1| Pseudomonas aeruginosa gene for chemotactic transducer CtpL, complete cds Length = 3285 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 cggcgacgccgaggcgggcgccggc 83 ||||||||||||||| ||||||||| Sbjct: 1497 cggcgacgccgaggctggcgccggc 1521
>ref|NM_103436.1| Arabidopsis thaliana unknown protein AT1G42480 mRNA, complete cds Length = 785 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 600 tcgtcgtcctcctcatcctc 581
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 catggcggcaacgacgacggcgac 65 ||||||||| |||||||||||||| Sbjct: 4063693 catggcggccacgacgacggcgac 4063716
>ref|XM_550386.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 693 tcgtcgtcctcctcatcctc 674
>ref|XM_509970.1| PREDICTED: Pan troglodytes similar to 4930487N19Rik protein (LOC452931), mRNA Length = 1281 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 139 cttcgtcgtcctcctcgtcctcgc 116
>gb|AY442517.1| Infectious hematopoietic necrosis virus strain SRCV nucleoprotein (N) gene, complete cds Length = 1299 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 1181 tcgtcgtcctcctcatcctc 1162
>gb|AY442513.1| Infectious hematopoietic necrosis virus strain LR-73 nucleoprotein (N) gene, complete cds Length = 1297 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 1181 tcgtcgtcctcctcatcctc 1162
>gb|AY442510.1| Infectious hematopoietic necrosis virus strain Col-85 nucleoprotein (N) gene, complete cds Length = 1297 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 1181 tcgtcgtcctcctcatcctc 1162
>gb|BT017513.1| Zea mays clone EL01N0419A08.c mRNA sequence Length = 817 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ggcggcaacgacgacggcgacgcc 68 ||||||| |||||||||||||||| Sbjct: 350 ggcggcagcgacgacggcgacgcc 327
>gb|AF253417.1| Homo sapiens microsomal epoxide hydrolase (EPHX1) gene, complete cds Length = 33795 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gcctcccccttcagaacaccgcca 295 |||||| ||||||||||||||||| Sbjct: 20738 gcctcctccttcagaacaccgcca 20715
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggtggccttcgcggggcgcg 226 |||||||||||||||||||| Sbjct: 2420426 ggtggccttcgcggggcgcg 2420407
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 catggcggcaacgacgacggcgac 65 ||||||||| |||||||||||||| Sbjct: 4063807 catggcggccacgacgacggcgac 4063830
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 gcggcaacgacgacggcgacgccgaggc 73 ||||||||||||||| ||||| |||||| Sbjct: 7818 gcggcaacgacgacgccgacgacgaggc 7845
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cggccgcctcccccttcaga 286 |||||||||||||||||||| Sbjct: 72964 cggccgcctcccccttcaga 72983
>ref|XM_606431.2| PREDICTED: Bos taurus similar to BTB (POZ) domain containing 14A (LOC528023), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 884 tcgtcgtcctcctcatcctc 865
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 gcggcaacgacgacggcgacgccgaggc 73 ||||||||||||||| ||||| |||||| Sbjct: 112500 gcggcaacgacgacgccgacgacgaggc 112527
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cggccgcctcccccttcaga 286 |||||||||||||||||||| Sbjct: 2803 cggccgcctcccccttcaga 2822
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cagaacaccgccaagctcgc 302 |||||||||||||||||||| Sbjct: 120813 cagaacaccgccaagctcgc 120794
>emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 in linkage group 7, complete sequence Length = 168673 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 29366 cttcgtcgtcctcctcgtcctcgc 29343
>ref|NM_001030681.1| Gallus gallus BTB (POZ) domain containing 14A (BTBD14A), mRNA Length = 2100 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 1034 tcgtcgtcctcctcatcctc 1015
>gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, complete sequence Length = 193390 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 114443 tcgtcgtcctcctcatcctc 114462
>gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete sequence Length = 113550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 45949 tcgtcgtcctcctcatcctc 45930
>emb|AL591895.9| Human DNA sequence from clone RP11-285F7 on chromosome 1 Contains the 3' end of the EPHX1 gene for epoxide hydrolase 1 microsomal (xenobiotic), the 3' end of a novel gene (KIAA0792) and a CpG island, complete sequence Length = 34507 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gcctcccccttcagaacaccgcca 295 |||||| ||||||||||||||||| Sbjct: 20064 gcctcctccttcagaacaccgcca 20041
>emb|X16961.1|DMDC2 Drosophila melanogaster mRNA for put. protein kinase DC2 Length = 2810 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 1298 tcgtcgtcctcctcatcctc 1279
>gb|BC092816.1| Danio rerio zgc:110237, mRNA (cDNA clone MGC:110237 IMAGE:7396978), complete cds Length = 1675 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 1219 cttcgtcgtcctcctcgtcctcgc 1196
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgacgacggcgacgccgagg 72 |||||||||||||||||||| Sbjct: 25830 cgacgacggcgacgccgagg 25811
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cggcaacgacgacggcgacg 66 |||||||||||||||||||| Sbjct: 263900 cggcaacgacgacggcgacg 263919
>emb|AJ720914.1| Gallus gallus mRNA for hypothetical protein, clone 29m3 Length = 2100 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 1034 tcgtcgtcctcctcatcctc 1015
>gb|AC104702.2| Drosophila melanogaster 3L BAC RP98-11B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153146 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 231 ctttttctccggcggcgtgcagctctcc 258 |||||||| ||||||||||||| ||||| Sbjct: 67465 ctttttctgcggcggcgtgcagatctcc 67492
>gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169209 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 42814 tcgtcgtcctcctcatcctc 42833
>gb|AE005955.1| Caulobacter crescentus CB15 section 281 of 359 of the complete genome Length = 11126 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cggcgacgccgaggcgggcgccggccgc 86 |||||||||||||| ||||||| ||||| Sbjct: 741 cggcgacgccgaggagggcgcccgccgc 714
>dbj|AK092674.1| Homo sapiens cDNA FLJ35355 fis, clone PUAEN2000152, moderately similar to L-A VIRUS GAG PROTEIN N-ACETYLTRANSFERASE (EC 2.3.1.-) Length = 2891 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 293 cttcgtcgtcctcctcgtcctcgc 270
>ref|NM_001011713.1| Homo sapiens N-acetyltransferase 12 (NAT12), mRNA Length = 2891 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 293 cttcgtcgtcctcctcgtcctcgc 270
>ref|NM_168638.2| Drosophila melanogaster cAMP-dependent protein kinase CG6117-RB, transcript variant B (Pka-C3), mRNA Length = 2200 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 688 tcgtcgtcctcctcatcctc 669
>ref|NM_168199.1| Drosophila melanogaster RhoGEF4 CG8606-RB, transcript variant B (RhoGEF4), mRNA Length = 1934 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctttttctccggcggcgtgcagctctcc 258 |||||||| ||||||||||||| ||||| Sbjct: 1702 ctttttctgcggcggcgtgcagatctcc 1675
>ref|NM_139844.2| Drosophila melanogaster RhoGEF4 CG8606-RA, transcript variant A (RhoGEF4), mRNA Length = 2131 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctttttctccggcggcgtgcagctctcc 258 |||||||| ||||||||||||| ||||| Sbjct: 1899 ctttttctgcggcggcgtgcagatctcc 1872
>ref|NM_079373.2| Drosophila melanogaster cAMP-dependent protein kinase CG6117-RA, transcript variant A (Pka-C3), mRNA Length = 2802 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 1290 tcgtcgtcctcctcatcctc 1271
>gb|AY058496.1| Drosophila melanogaster LD03170 full length cDNA Length = 2119 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctttttctccggcggcgtgcagctctcc 258 |||||||| ||||||||||||| ||||| Sbjct: 1870 ctttttctgcggcggcgtgcagatctcc 1843
>ref|NM_001017634.1| Danio rerio zgc:110237 (zgc:110237), mRNA Length = 1675 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 1219 cttcgtcgtcctcctcgtcctcgc 1196
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cggccgcctcccccttcaga 286 |||||||||||||||||||| Sbjct: 1931248 cggccgcctcccccttcaga 1931267
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 gcggcaacgacgacggcgacgccgaggc 73 ||||||||||||||| ||||| |||||| Sbjct: 20274228 gcggcaacgacgacgccgacgacgaggc 20274255
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 4123112 tcgtcgtcctcctcatcctc 4123093
>emb|BX818143.1|CNS0AE8G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL63ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 730 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 559 tcgtcgtcctcctcatcctc 540
>gb|AC025815.10|AC025815 Arabidopsis thaliana chromosome 1 BAC T8D8 genomic sequence, complete sequence Length = 55021 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 7554 tcgtcgtcctcctcatcctc 7535
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 tcaccgtcaacgcctccggcgccg 361 |||||||||||| ||||||||||| Sbjct: 58613 tcaccgtcaacggctccggcgccg 58636
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 89855 tcgtcgtcctcctcatcctc 89836
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgccggccgccttcgtcgtc 96 |||||||||||||||||||| Sbjct: 8796296 cgccggccgccttcgtcgtc 8796277
>gb|AF255674.1|AF255674 Drosophila melanogaster rho guanine nucleotide exchange factor 4 (rhoGEF4) mRNA, complete cds Length = 2163 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctttttctccggcggcgtgcagctctcc 258 |||||||| ||||||||||||| ||||| Sbjct: 1899 ctttttctgcggcggcgtgcagatctcc 1872
>gb|AE004450.1| Pseudomonas aeruginosa PAO1, section 11 of 529 of the complete genome Length = 11085 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ctccggcgccggcgacctga 370 |||||||||||||||||||| Sbjct: 2597 ctccggcgccggcgacctga 2616
>gb|BT003570.1| Drosophila melanogaster LD45290 full insert cDNA Length = 1950 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctttttctccggcggcgtgcagctctcc 258 |||||||| ||||||||||||| ||||| Sbjct: 1701 ctttttctgcggcggcgtgcagatctcc 1674
>gb|AY088187.1| Arabidopsis thaliana clone 42677 mRNA, complete sequence Length = 785 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 600 tcgtcgtcctcctcatcctc 581
>gb|AY948961.1| Homo sapiens epoxide hydrolase 1, microsomal (xenobiotic) (EPHX1) gene, complete cds Length = 24160 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gcctcccccttcagaacaccgcca 295 |||||| ||||||||||||||||| Sbjct: 11657 gcctcctccttcagaacaccgcca 11634
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 acggcgacgccgaggcgggc 77 |||||||||||||||||||| Sbjct: 1276050 acggcgacgccgaggcgggc 1276031
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 70083 tcgtcgtcctcctcatcctc 70064
>dbj|AB167788.1| Equus caballus CHRM1 gene for cholinergic receptor, muscarinic 1, partial cds Length = 469 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccttcgtcgtcctcctcatcctc 108 |||||||||||||||||| ||||| Sbjct: 270 gccttcgtcgtcctcctcctcctc 247
>dbj|AK175854.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-47-F10 Length = 784 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 591 tcgtcgtcctcctcatcctc 572
>dbj|AB118015.1| Oryza sativa (japonica cultivar-group) bip128 mRNA for BRI1-KD interacting protein 128, partial cds Length = 505 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 165 tcgtcgtcctcctcatcctc 146
>emb|AJ332915.1|HSA332915 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KF10C Length = 604 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 158 cttcgtcgtcctcctcgtcctcgc 181
>dbj|AK066179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C04, full insert sequence Length = 1557 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 693 tcgtcgtcctcctcatcctc 674
>gb|AY109506.1| Zea mays CL7587_1 mRNA sequence Length = 1083 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 190 gacgggttcaccttcggggtggccttcgcggg 221 ||||| |||||||||||||| | ||||||||| Sbjct: 238 gacggcttcaccttcggggtcgtcttcgcggg 269
>emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-934B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196533 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ggtggcctttgcagggagga 409 |||||||||||||||||||| Sbjct: 77463 ggtggcctttgcagggagga 77482
>gb|AE003559.3| Drosophila melanogaster chromosome 3L, section 26 of 83 of the complete sequence Length = 269948 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 231 ctttttctccggcggcgtgcagctctcc 258 |||||||| ||||||||||||| ||||| Sbjct: 112017 ctttttctgcggcggcgtgcagatctcc 112044
>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 222275 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcgtcgtcctcctcatcctcgc 110 |||||||||||||||| ||||||| Sbjct: 120441 cttcgtcgtcctcctcgtcctcgc 120418
>gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56 of 83 of the complete sequence Length = 252201 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tcgtcgtcctcctcatcctc 108 |||||||||||||||||||| Sbjct: 178799 tcgtcgtcctcctcatcctc 178818
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204230 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tcccccttcagaacaccgcc 294 |||||||||||||||||||| Sbjct: 66486 tcccccttcagaacaccgcc 66467
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cggccgcctcccccttcaga 286 |||||||||||||||||||| Sbjct: 1939029 cggccgcctcccccttcaga 1939048
>gb|AY543534.1| Triticum aestivum expansin EXPA8 mRNA, complete cds Length = 1005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ccggcgccggcgacctgacg 372 |||||||||||||||||||| Sbjct: 599 ccggcgccggcgacctgacg 618
>dbj|AB008193.1| Homo sapiens genes for leukotriene B4 receptor BLT2, leukotriene B4 receptor BLT1, complete cds Length = 10902 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ggtggcctttgcagggagga 409 |||||||||||||||||||| Sbjct: 3334 ggtggcctttgcagggagga 3315
>dbj|AB070941.1| Streptomyces avermitilis polyketide-1 biosynthetic gene cluster Length = 24045 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgccggccgccttcgtcgtc 96 |||||||||||||||||||| Sbjct: 22288 cgccggccgccttcgtcgtc 22269 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,899,891 Number of Sequences: 3902068 Number of extensions: 2899891 Number of successful extensions: 97055 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93327 Number of HSP's gapped (non-prelim): 3727 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)