| Clone Name | baet21h07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 109 bits (55), Expect = 7e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | ||| ||||||||| | |||||||| | |||||||||||| Sbjct: 16307931 gacgccggaggagttcaagatgatgatggacgagctgttcctgctgagcggcgtgctcaa 16307872 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | |||||||||||||||||| | || ||||| ||||||||||||||| || ||||||| Sbjct: 16307871 catcggcgacttcatcccgtggctagactggctcgacctgcaggggtacatcaggaggat 16307812 Query: 349 gaa 351 ||| Sbjct: 16307811 gaa 16307809 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| | |||||| | ||||||||||||||||||||||| Sbjct: 16333869 gacgccggaggagttcaagtggatgctcgacgagctgttcctgctcaacggcgtgctcaa 16333928 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | ||||||| |||||||||| | || ||||| ||||||||||||||| || |||||| Sbjct: 16333929 catcggcgactccatcccgtggctcgactggctggacctgcaggggtacatcaagaggat 16333988 Query: 349 gaa 351 ||| Sbjct: 16333989 gaa 16333991 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| |||| ||| | |||||| | |||||||||||||| Sbjct: 4723664 gacgccggaggagttcaagtggatgctggaggagctgttcctgatgaacggcgtgctcaa 4723605 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | |||||||||||||| ||| |||| ||||| ||||||||||||||| || ||||||| Sbjct: 4723604 catcggcgacttcatcccatggctggattggctggacctgcaggggtacatcaggaggat 4723545 Query: 349 gaa 351 ||| Sbjct: 4723544 gaa 4723542 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 125 tacctgttcacggcgacgctcggtatgatctctcggatggtgctaggcaagaagtacgtg 184 ||||||| ||||||||||||||| |||| || || |||||||| ||||||||||||||| Sbjct: 16308050 tacctgtccacggcgacgctcggcgtgatatcgcgcatggtgctgggcaagaagtacgtg 16307991 Query: 185 g 185 | Sbjct: 16307990 g 16307990 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 264 tcttcctgctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctag 323 |||||||||| |||||||||||| || | || || | ||||||||||||| ||||| | Sbjct: 16338871 tcttcctgcttaacggcgtgctcgacattggggattcgatcccgtggttgggctggctgg 16338930 Query: 324 acctgcaggggtacgtcgggaggatgaa 351 |||||||||||||| | |||||||||| Sbjct: 16338931 acctgcaggggtacattcggaggatgaa 16338958 Score = 44.1 bits (22), Expect = 0.33 Identities = 34/38 (89%) Strand = Plus / Plus Query: 150 tgatctctcggatggtgctaggcaagaagtacgtggag 187 ||||||| || |||||||| |||||||||||| ||||| Sbjct: 16338766 tgatctcgcgcatggtgctcggcaagaagtacctggag 16338803 Score = 44.1 bits (22), Expect = 0.33 Identities = 46/54 (85%) Strand = Plus / Minus Query: 136 ggcgacgctcggtatgatctctcggatggtgctaggcaagaagtacgtggagaa 189 |||| ||||||| ||||||| || |||||||| || ||||||||||| ||||| Sbjct: 4723748 ggcggcgctcggcgtgatctcgcgcatggtgctcggaaagaagtacgtcgagaa 4723695 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccgtcgtcggaggcggcagcggcg 226 ||||||||||||||||| |||||| Sbjct: 19795321 ccgtcgtcggaggcggcggcggcg 19795344 Score = 40.1 bits (20), Expect = 5.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 272 ctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctagacctgcag 331 ||||||||||| |||| || |||||| ||||||||| | |||||| | ||||| ||| Sbjct: 16352669 ctcaacggcgtcttcaatgtcggcgaccagatcccgtggctcgagtggttggacctacag 16352610 Query: 332 gggtacgtcgggaggatgaa 351 || |||||| ||||||||| Sbjct: 16352609 ggctacgtcaagaggatgaa 16352590 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgctgctgcgcgacctgcac 67 |||||||||||||||||||| Sbjct: 16333730 cgctgctgcgcgacctgcac 16333749 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgctgctgcgcgacctgcac 67 |||||||||||||||||||| Sbjct: 16308100 cgctgctgcgcgacctgcac 16308081
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 109 bits (55), Expect = 7e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | ||| ||||||||| | |||||||| | |||||||||||| Sbjct: 124447 gacgccggaggagttcaagatgatgatggacgagctgttcctgctgagcggcgtgctcaa 124388 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | |||||||||||||||||| | || ||||| ||||||||||||||| || ||||||| Sbjct: 124387 catcggcgacttcatcccgtggctagactggctcgacctgcaggggtacatcaggaggat 124328 Query: 349 gaa 351 ||| Sbjct: 124327 gaa 124325 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| | |||||| | ||||||||||||||||||||||| Sbjct: 150385 gacgccggaggagttcaagtggatgctcgacgagctgttcctgctcaacggcgtgctcaa 150444 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | ||||||| |||||||||| | || ||||| ||||||||||||||| || |||||| Sbjct: 150445 catcggcgactccatcccgtggctcgactggctggacctgcaggggtacatcaagaggat 150504 Query: 349 gaa 351 ||| Sbjct: 150505 gaa 150507 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 125 tacctgttcacggcgacgctcggtatgatctctcggatggtgctaggcaagaagtacgtg 184 ||||||| ||||||||||||||| |||| || || |||||||| ||||||||||||||| Sbjct: 124566 tacctgtccacggcgacgctcggcgtgatatcgcgcatggtgctgggcaagaagtacgtg 124507 Query: 185 g 185 | Sbjct: 124506 g 124506 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 264 tcttcctgctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctag 323 |||||||||| |||||||||||| || | || || | ||||||||||||| ||||| | Sbjct: 155387 tcttcctgcttaacggcgtgctcgacattggggattcgatcccgtggttgggctggctgg 155446 Query: 324 acctgcaggggtacgtcgggaggatgaa 351 |||||||||||||| | |||||||||| Sbjct: 155447 acctgcaggggtacattcggaggatgaa 155474 Score = 44.1 bits (22), Expect = 0.33 Identities = 34/38 (89%) Strand = Plus / Plus Query: 150 tgatctctcggatggtgctaggcaagaagtacgtggag 187 ||||||| || |||||||| |||||||||||| ||||| Sbjct: 155282 tgatctcgcgcatggtgctcggcaagaagtacctggag 155319 Score = 40.1 bits (20), Expect = 5.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 272 ctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctagacctgcag 331 ||||||||||| |||| || |||||| ||||||||| | |||||| | ||||| ||| Sbjct: 169185 ctcaacggcgtcttcaatgtcggcgaccagatcccgtggctcgagtggttggacctacag 169126 Query: 332 gggtacgtcgggaggatgaa 351 || |||||| ||||||||| Sbjct: 169125 ggctacgtcaagaggatgaa 169106 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgctgctgcgcgacctgcac 67 |||||||||||||||||||| Sbjct: 150246 cgctgctgcgcgacctgcac 150265 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgctgctgcgcgacctgcac 67 |||||||||||||||||||| Sbjct: 124616 cgctgctgcgcgacctgcac 124597
>dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E07, full insert sequence Length = 1865 Score = 109 bits (55), Expect = 7e-21 Identities = 106/123 (86%) Strand = Plus / Plus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | ||| ||||||||| | |||||||| | |||||||||||| Sbjct: 708 gacgccggaggagttcaagatgatgatggacgagctgttcctgctgagcggcgtgctcaa 767 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | |||||||||||||||||| | || ||||| ||||||||||||||| || ||||||| Sbjct: 768 catcggcgacttcatcccgtggctagactggctcgacctgcaggggtacatcaggaggat 827 Query: 349 gaa 351 ||| Sbjct: 828 gaa 830 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 125 tacctgttcacggcgacgctcggtatgatctctcggatggtgctaggcaagaagtacgtg 184 ||||||| ||||||||||||||| |||| || || |||||||| ||||||||||||||| Sbjct: 589 tacctgtccacggcgacgctcggcgtgatatcgcgcatggtgctgggcaagaagtacgtg 648 Query: 185 g 185 | Sbjct: 649 g 649
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| |||| ||| | |||||| | |||||||||||||| Sbjct: 41268 gacgccggaggagttcaagtggatgctggaggagctgttcctgatgaacggcgtgctcaa 41209 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | |||||||||||||| ||| |||| ||||| ||||||||||||||| || ||||||| Sbjct: 41208 catcggcgacttcatcccatggctggattggctggacctgcaggggtacatcaggaggat 41149 Query: 349 gaa 351 ||| Sbjct: 41148 gaa 41146 Score = 44.1 bits (22), Expect = 0.33 Identities = 46/54 (85%) Strand = Plus / Minus Query: 136 ggcgacgctcggtatgatctctcggatggtgctaggcaagaagtacgtggagaa 189 |||| ||||||| ||||||| || |||||||| || ||||||||||| ||||| Sbjct: 41352 ggcggcgctcggcgtgatctcgcgcatggtgctcggaaagaagtacgtcgagaa 41299
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| | |||||| | ||||||||||||||||||||||| Sbjct: 22416 gacgccggaggagttcaagtggatgctcgacgagctgttcctgctcaacggcgtgctcaa 22475 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | ||||||| |||||||||| | || ||||| ||||||||||||||| || |||||| Sbjct: 22476 catcggcgactccatcccgtggctcgactggctggacctgcaggggtacatcaagaggat 22535 Query: 349 gaa 351 ||| Sbjct: 22536 gaa 22538 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 264 tcttcctgctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctag 323 |||||||||| |||||||||||| || | || || | ||||||||||||| ||||| | Sbjct: 27418 tcttcctgcttaacggcgtgctcgacattggggattcgatcccgtggttgggctggctgg 27477 Query: 324 acctgcaggggtacgtcgggaggatgaa 351 |||||||||||||| | |||||||||| Sbjct: 27478 acctgcaggggtacattcggaggatgaa 27505 Score = 44.1 bits (22), Expect = 0.33 Identities = 34/38 (89%) Strand = Plus / Plus Query: 150 tgatctctcggatggtgctaggcaagaagtacgtggag 187 ||||||| || |||||||| |||||||||||| ||||| Sbjct: 27313 tgatctcgcgcatggtgctcggcaagaagtacctggag 27350 Score = 40.1 bits (20), Expect = 5.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 272 ctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctagacctgcag 331 ||||||||||| |||| || |||||| ||||||||| | |||||| | ||||| ||| Sbjct: 41216 ctcaacggcgtcttcaatgtcggcgaccagatcccgtggctcgagtggttggacctacag 41157 Query: 332 gggtacgtcgggaggatgaa 351 || |||||| ||||||||| Sbjct: 41156 ggctacgtcaagaggatgaa 41137 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgctgctgcgcgacctgcac 67 |||||||||||||||||||| Sbjct: 22277 cgctgctgcgcgacctgcac 22296
>dbj|AK100987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145F09, full insert sequence Length = 1897 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| |||| ||| | |||||| | |||||||||||||| Sbjct: 655 gacgccggaggagttcaagtggatgctggaggagctgttcctgatgaacggcgtgctcaa 714 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | |||||||||||||| ||| |||| ||||| ||||||||||||||| || ||||||| Sbjct: 715 catcggcgacttcatcccatggctggattggctggacctgcaggggtacatcaggaggat 774 Query: 349 gaa 351 ||| Sbjct: 775 gaa 777 Score = 44.1 bits (22), Expect = 0.33 Identities = 46/54 (85%) Strand = Plus / Plus Query: 136 ggcgacgctcggtatgatctctcggatggtgctaggcaagaagtacgtggagaa 189 |||| ||||||| ||||||| || |||||||| || ||||||||||| ||||| Sbjct: 571 ggcggcgctcggcgtgatctcgcgcatggtgctcggaaagaagtacgtcgagaa 624
>dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F15, full insert sequence Length = 3587 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| | |||||| | ||||||||||||||||||||||| Sbjct: 1720 gacgccggaggagttcaagtggatgctcgacgagctgttcctgctcaacggcgtgctcaa 1779 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | ||||||| |||||||||| | || ||||| ||||||||||||||| || |||||| Sbjct: 1780 catcggcgactccatcccgtggctcgactggctggacctgcaggggtacatcaagaggat 1839 Query: 349 gaa 351 ||| Sbjct: 1840 gaa 1842 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgctgctgcgcgacctgcac 67 |||||||||||||||||||| Sbjct: 1581 cgctgctgcgcgacctgcac 1600
>dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D15, full insert sequence Length = 1825 Score = 93.7 bits (47), Expect = 4e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 229 gacgccgcaggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaa 288 ||||||| ||||||||| | |||| | |||||| | |||||| |||||||||||||||| Sbjct: 684 gacgccggaggagttcaagtggatgctcgacgagctgttcctgttcaacggcgtgctcaa 743 Query: 289 cgtaggcgacttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggat 348 | | ||||||| |||||||||| | || ||||| ||||||||||||||| || |||||| Sbjct: 744 catcggcgactccatcccgtggctcgactggctggacctgcaggggtacatcaagaggat 803 Query: 349 gaa 351 ||| Sbjct: 804 gaa 806 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgctgctgcgcgacctgcac 67 |||||||||||||||||||| Sbjct: 545 cgctgctgcgcgacctgcac 564
>ref|XM_482757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 238 ggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaacgtaggcga 297 |||||||| | |||| |||||||| || |||||||||||||||| |||||||| ||||| Sbjct: 639 ggagttcaagtggatgctggacgagctcctcctgctcaacggcgtcctcaacgtcggcga 698 Query: 298 cttcatcccgtggttggagtggctagacctgcaggggtacgt 339 || ||||||||| |||| ||| | ||||||||||||||||| Sbjct: 699 ctggatcccgtgggtggactggatggacctgcaggggtacgt 740
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 238 ggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaacgtaggcga 297 |||||||| | |||| |||||||| || |||||||||||||||| |||||||| ||||| Sbjct: 22363060 ggagttcaagtggatgctggacgagctcctcctgctcaacggcgtcctcaacgtcggcga 22363001 Query: 298 cttcatcccgtggttggagtggctagacctgcaggggtacgt 339 || ||||||||| |||| ||| | ||||||||||||||||| Sbjct: 22363000 ctggatcccgtgggtggactggatggacctgcaggggtacgt 22362959 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241691 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9241651
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 238 ggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaacgtaggcga 297 |||||||| | |||| |||||||| || |||||||||||||||| |||||||| ||||| Sbjct: 60043 ggagttcaagtggatgctggacgagctcctcctgctcaacggcgtcctcaacgtcggcga 59984 Query: 298 cttcatcccgtggttggagtggctagacctgcaggggtacgt 339 || ||||||||| |||| ||| | ||||||||||||||||| Sbjct: 59983 ctggatcccgtgggtggactggatggacctgcaggggtacgt 59942
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 75252 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 75212
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118409 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 118369
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 499
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119493 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119453 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95663 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95703
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139061 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 139021 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110036 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110076
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119493 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119453 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95663 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95703
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119402 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95608 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95648
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 458
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 382286 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 382326
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122774 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 122734
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 113343 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 113303
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 147
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508241 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 31508281
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 368025 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 367985 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 184630 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 184590
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 84355 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 84315
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132332 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 132292 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104546 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104586
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135816 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106774 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106814
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131224 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 131184 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103411 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 103451
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 6064
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139917 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 139877 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110143 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110183
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 115767 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 115727 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86353 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 86393
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123232 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123192 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99505 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 99545
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119462 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119422 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95656 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95696
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122705 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 122745 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14430 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 14470
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141238 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 141278
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139143 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 139103 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110802 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110842
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141665 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 141625 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111992 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 112032
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134538 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 134498 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105744 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105784
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131348 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 131308 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102097 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 102137
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136494 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 136454 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107063 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 107103
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 142395 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110893 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110933
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1968 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 2008
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 93834 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 93874
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4333 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 4373
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 44453 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 44413 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 20665 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 20705
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 482
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 58181 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 58141
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 1042
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135102 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135062 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105934 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105974
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27898 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 27938
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 532
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 2252
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268590 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9268630 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228090 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9228130 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164679 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9164719 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056504 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9056544 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 9 ggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||| |||||||||||||| || |||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaa 25171481
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938575 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 19938615 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10387482 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276856 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10276816
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825315 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 12825275 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 cggaggcggcagcggcgatgacgc 233 |||||||||||||||||| ||||| Sbjct: 17992529 cggaggcggcagcggcgacgacgc 17992506
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598757 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 31598797
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526073 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 33526113
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86707 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 86747
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132555 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 132515 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104209 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104249
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46695 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 46735
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 47468 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 47428
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 71270 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 71310
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123292 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123252 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99545 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 99585
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 491
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 491
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 484
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 488
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 484
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 467
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 52904 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 52864
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 132
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 169
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 363
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5858 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 5898
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 274
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 439
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 42 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 82
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 482
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 385
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 277
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 483
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 389
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 148
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 276
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 279
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 397
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 352
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 479
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 98
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 277
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 279
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127421 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 127381 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107501 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 107541
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136148 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 136108 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106277 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106317
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135237 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135197 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106106 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106146
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 483
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135235 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135195 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106103 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106143
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135147 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135107 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105981 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106021
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 460
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949851 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 19949891 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393481 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10393521 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282895 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10282855
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133780 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 133740 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104191 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104231
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133516 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 133476 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105133 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105173
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135854 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135814 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106772 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106812
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 124009 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123969 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100222 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 100262
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150802 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 150762 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117864 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 117904
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119436 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119396 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95603 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95643
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132325 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 132285 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104544 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104584
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135585 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135545 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106553 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106593
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119628 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119588 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95266 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95306
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135114 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135074 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105948 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105988
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 486
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 584
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88793 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 88833
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 261
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 483
>ref|XM_465852.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 77.8 bits (39), Expect = 2e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 237 aggagttcacgcggataatggacgagttcttcctgctcaacggcgtgctcaacgtaggcg 296 ||||||||| | |||| || || ||| ||||| | |||||||||||| ||||| | |||| Sbjct: 653 aggagttcaggtggatgatcgaggagatcttcttcctcaacggcgtgttcaacatcggcg 712 Query: 297 acttcatcccgtggttggagtggctagacctgcaggggtacgtcgggaggatgaa 351 || | |||||||| ||| |||||| |||| |||||||||| ||||||||||||| Sbjct: 713 acatggtcccgtggctggggtggctggacccgcaggggtacatcgggaggatgaa 767
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 560 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 600
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 4674 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 4714
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 135458 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 135418 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 106448 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 106488
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 622 tactcctgggtgaccgatagcgaagtagtaccgcgagggaa 662
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 443 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 483
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||||||| |||||||||||||||| Sbjct: 442 tactcctgggtgaccgatagcgaaatagtaccgtgagggaa 482
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||||||| |||||||||||||||| Sbjct: 115220 tactcctgggtgaccgatagcgaaatagtaccgtgagggaa 115180 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||||||| |||||||||||||||| Sbjct: 86768 tactcctgggtgaccgatagcgaaatagtaccgtgagggaa 86808
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146115 tactcctgggtgaccgatagcaaagtagtaccgtgagggaa 146075 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112347 tactcctgggtgaccgatagcaaagtagtaccgtgagggaa 112387
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 2488 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 2528
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 23251 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 23211
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtactaccgtgagggaa 491
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtaataccgtgagggaa 491
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtactaccgtgagggaa 491
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtaataccgtgagggaa 491
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtaataccgtgagggaa 491
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 451 tactcctgggtgaccgatagcgaagtaataccgtgagggaa 491
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 402 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 442
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 408 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 448
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 456 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 496
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 135737 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 135697 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 106670 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 106710
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 131425 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 131385 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 103969 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 104009
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 130092 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 130052 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 102364 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 102404
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 117705 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 117665 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 90397 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 90437
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 127997 tactcctgggtgaccgatagcgaagcagtaccgtgagggaa 127957 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95450 tactcctgggtgaccgatagcgaagcagtaccgtgagggaa 95490
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 139269 tactcctgggtgacccatagcgaagtagtaccgtgagggaa 139229 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 110030 tactcctgggtgacccatagcgaagtagtaccgtgagggaa 110070
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 4943 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 4983
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaa 2252
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 4943 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 4983
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 444 tactcctgggtgaccgatagtgaagtagtaccgtgagggaa 484
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 272 ctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctagacctgcag 331 |||||||||||| ||||| | |||||| | |||||||| ||| |||||| |||| |||| Sbjct: 17906239 ctcaacggcgtgttcaacatcggcgacatggtcccgtggctggggtggctggacccgcag 17906298 Query: 332 gggtacgtcgggaggatgaa 351 |||||| ||||||||||||| Sbjct: 17906299 gggtacatcgggaggatgaa 17906318
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 272 ctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctagacctgcag 331 |||||||||||| ||||| | |||||| | |||||||| ||| |||||| |||| |||| Sbjct: 40872 ctcaacggcgtgttcaacatcggcgacatggtcccgtggctggggtggctggacccgcag 40931 Query: 332 gggtacgtcgggaggatgaa 351 |||||| ||||||||||||| Sbjct: 40932 gggtacatcgggaggatgaa 40951
>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654A08 Length = 154812 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 272 ctcaacggcgtgctcaacgtaggcgacttcatcccgtggttggagtggctagacctgcag 331 |||||||||||| ||||| | |||||| | |||||||| ||| |||||| |||| |||| Sbjct: 145770 ctcaacggcgtgttcaacatcggcgacatggtcccgtggctggggtggctggacccgcag 145829 Query: 332 gggtacgtcgggaggatgaa 351 |||||| ||||||||||||| Sbjct: 145830 gggtacatcgggaggatgaa 145849
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 506 tactcctgggtgaccgatagcgaaatagtaccgcgagggaat 547
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 95364 tactcctgggtgaccgatagcgatgtagtacggtgagggaa 95404
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 825 tactcctgggtgaccgatagcgatgtagtacggtgagggaa 785
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| |||||||||||||||||||||||| ||||||| Sbjct: 62 tactcctgtgtgaccgatagcgaagtagtaccgcgagggaa 102
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 755 tactcctgggtgaccgatagcgaaatagtaccgcgagggaa 795
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||| ||||||||||||||||||| |||||||||||||||| Sbjct: 138824 tacttctgggtgaccgatagcgaaatagtaccgtgagggaa 138784 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||| ||||||||||||||||||| |||||||||||||||| Sbjct: 83053 tacttctgggtgaccgatagcgaaatagtaccgtgagggaa 83093
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| |||||||||||||||| |||||||||||||||| Sbjct: 435 tactcctaggtgaccgatagcgaactagtaccgtgagggaa 475
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 473 tactcctgggtgaccgatagcgaaatagtaccgcgagggaa 513
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| |||||||||||||||| |||||||||||||||| Sbjct: 440 tactcctaggtgaccgatagcgaactagtaccgtgagggaa 480
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 510 tactcctgagtgaccgatagcgaactagtaccgtgagggaa 550
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 419 tactcctgggtaaccgatagtgaagtagtaccgtgagggaa 459
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 665 tactcctgggtgaccgatagcgaaatagtaccgcgagggaa 705
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 430 tactcctggatgaccgatagcgaactagtaccgtgagggaa 470
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 11893637 tactcctgggtgaccgatagcgatgtagtacggtgagggaa 11893677 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cggcagcggcgatgacgccg 235 |||||||||||||||||||| Sbjct: 28163076 cggcagcggcgatgacgccg 28163057
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 443 tactcctggatgaccgatagcgaactagtaccgtgagggaa 483
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 5017 tactcctggatgaccgatagcgaactagtaccgtgagggaa 5057
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||| ||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaa 485
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||| ||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaa 3519
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| |||||||||||||||| |||||||||||||||| Sbjct: 25244 tactcctaggtgaccgatagcgaactagtaccgtgagggaa 25284
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 11972044 tactcctgggtgaccgatagcgatgtagtacggtgagggaa 11972084 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cggcagcggcgatgacgccg 235 |||||||||||||||||||| Sbjct: 28147954 cggcagcggcgatgacgccg 28147935
>gb|DQ008806.1| Dioscorea sp. Qiu 94044 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3174 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||||||||||||||||||| Sbjct: 539 tgaccgatagcgaagtagtaccgtgagggaa 569
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 4 tcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| |||||||||||||||| ||||||||||||||| Sbjct: 144366 tcctgagtgaccgatagcgaagcagtaccgtgagggaa 144403 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 4 tcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| |||||||||||||||| ||||||||||||||| Sbjct: 88485 tcctgagtgaccgatagcgaagcagtaccgtgagggaa 88448
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 |||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 171059 tactcctgggtgaccgatagtgaattagtaccgcgagggaat 171018 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 |||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 121867 tactcctgggtgaccgatagtgaattagtaccgcgagggaat 121908
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 |||||||| ||||||||||||||| |||||||| |||||||| Sbjct: 581 tactcctgagtgaccgatagcgaaatagtaccgcgagggaat 622
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 |||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 458 tactcctgggtgaccgatagtgaattagtaccgcgagggaat 499
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 |||||||| ||||||||||||||| |||||||| |||||||| Sbjct: 581 tactcctgagtgaccgatagcgaaatagtaccgcgagggaat 622
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 52242 tactcctgggtaaccgatagttaagtagtaccgtgagggaa 52202 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 37586 tactcctgggtaaccgatagttaagtagtaccgtgagggaa 37626
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 62 tactcctgtgtgaccgatagcgaaatagtaccgcgagggaa 102
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 425 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 465
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 437 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 477
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 425 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 465
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 449 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 489
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 426 tactcttgggtgaccaatagtgaagtagtaccgtgagggaa 466
>emb|AM085146.1| Magnetospirillum gryphiswaldense magnetosome island Length = 130000 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 6894 tactcctcagtgaccgatagcgaactagtaccgtgagggaa 6934
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 9 ggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||| |||||||||||||||||||| Sbjct: 446 ggtgaccgatagtgaagtagtaccgtgagggaa 478
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| |||||||||||||| ||| |||||||||||||||| Sbjct: 136929 tactcttgggtgaccgatagtgaaatagtaccgtgagggaa 136969 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| |||||||||||||| ||| |||||||||||||||| Sbjct: 48615 tactcttgggtgaccgatagtgaaatagtaccgtgagggaa 48575
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| |||||||||||||| |||||||||||||||| Sbjct: 483 tactcctgaatgaccgatagcgaaatagtaccgtgagggaa 523
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| |||||||||| |||||||||||||||||||| Sbjct: 192314 tactcctgaatgaccgatagtgaagtagtaccgtgagggaa 192354 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| |||||||||| |||||||||||||||||||| Sbjct: 144468 tactcctgaatgaccgatagtgaagtagtaccgtgagggaa 144428
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| |||||||||||||||||| ||||||||||||||| Sbjct: 445 tactcttgggtgaccgatagcgaaacagtaccgtgagggaa 485
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 474 tactcctgagtgaccgatagcgaaatagtaccgcgagggaa 514
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| ||| |||||||| ||||||| Sbjct: 591 tactcctgggtgaccgatagtgaaatagtaccgcgagggaa 631
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 462 tactcctgagtgaccgatagcgaaatagtaccgcgagggaa 502
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 1829574 tactcctcagtgaccgatagcgaactagtaccgtgagggaa 1829614 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 967348 tactcctcagtgaccgatagcgaactagtaccgtgagggaa 967388
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 9 ggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||| |||||||||||||||||||| Sbjct: 315 ggtgaccgatagtgaagtagtaccgtgagggaa 347
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 462 tactcctgggtgaccgatagtgaaacagtaccgtgagggaa 502
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| ||||||||||||||| ||||||| |||||||| Sbjct: 544 tactcctgagtgaccgatagcgaactagtaccatgagggaa 584
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 435 tactcctgagtgaccgatagcgaaatagtaccgcgagggaa 475
>emb|AJ440238.1|ACT440238 Conexibacter woesei partial 23S rRNA gene, type strain DSM 14684T Length = 1821 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| |||||||||||||| | |||||||||||||||| Sbjct: 304 tactcctaggtgaccgatagcggactagtaccgtgagggaa 344
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 2231 tactcctgggtgaccgatagtgaaacagtaccgtgagggaa 2271
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| | |||||||||| |||||||||||||||||||| Sbjct: 438 tactcctagatgaccgatagtgaagtagtaccgtgagggaa 478
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||| ||||||| ||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaa 485
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 4489 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaa 4529
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaa 496
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||| ||||||| ||||||| Sbjct: 445 tactcctgggtgaccgatagagaagaagtaccgcgagggaa 485
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaa 496
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 462 tactcctgagtgaccgatagcgaaatagtaccgcgagggaa 502
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||| ||||||| ||||||| Sbjct: 124820 tactcctgggtgaccgatagagaagaagtaccgcgagggaa 124780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||||||||| |||| ||||||| ||||||| Sbjct: 95046 tactcctgggtgaccgatagagaagaagtaccgcgagggaa 95086
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 4514 tactcctgggtaaccgatagttaagtagtaccgtgagggaa 4554
>gb|DQ312839.1| Uncultured bacterium clone 3J11H 23S ribosomal RNA gene, partial sequence Length = 752 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 10 gtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||||| |||||||||||||||| Sbjct: 260 gtgaccgatagcgaactagtaccgtgagggaa 291
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 3 ctcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||||| ||||| |||| |||||||||||||||||||| Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaa 3327
>gb|DQ313085.1| Uncultured bacterium clone 3R3H 23S ribosomal RNA gene, partial sequence Length = 692 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||| |||||||||||||||||||| Sbjct: 309 tgaccgatagtgaagtagtaccgtgagggaa 339
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| |||||||||||||||| Sbjct: 461 tgaccgatagcgaaatagtaccgtgagggaa 491
>gb|AY244366.1| Mesorhizobium huakuii strain USDA 4779 23S ribosomal RNA gene, partial sequence Length = 2800 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| |||||||||||||||| Sbjct: 484 tgaccgatagcgaactagtaccgtgagggaa 514
>gb|AY244364.1| Mesorhizobium loti strain USDA 3471 23S ribosomal RNA gene, partial sequence Length = 2799 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| |||||||||||||||| Sbjct: 483 tgaccgatagcgaactagtaccgtgagggaa 513
>gb|AY244363.1| Mesorhizobium mediterraneum strain USDA 3383 23S ribosomal RNA gene, partial sequence Length = 2819 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| |||||||||||||||| Sbjct: 496 tgaccgatagcgaactagtaccgtgagggaa 526
>gb|AY244358.1| Mesorhizobium amorphae strain ACCC 19665 23S ribosomal RNA gene, partial sequence Length = 2796 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| |||||||||||||||| Sbjct: 482 tgaccgatagcgaactagtaccgtgagggaa 512
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| |||||||||||||||| Sbjct: 2756064 tgaccgatagcgaactagtaccgtgagggaa 2756034 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 11 tgaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| |||||||||||||||| Sbjct: 2748551 tgaccgatagcgaactagtaccgtgagggaa 2748521
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||||| | ||||||||||||||||| Sbjct: 1473718 tactcctcgatgaccgatagcggattagtaccgtgagggaat 1473759
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||| ||| ||||||||||||||||| Sbjct: 6115 tactcctagatgaccgatagtgaaatagtaccgtgagggaat 6156
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||||| | ||||||||||||||||| Sbjct: 91134 tactcctcgatgaccgatagcggattagtaccgtgagggaat 91175
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||||| | ||||||||||||||||| Sbjct: 157613 tactcctcgatgaccgatagcggattagtaccgtgagggaat 157654
>emb|AJ248283.1|CNSPAX01 Pyrococcus abyssi complete genome; segment 1/6 Length = 307150 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 207287 gaccgatagcgaactagtaccgtgagggaa 207316
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||| ||| ||||||||||||||||| Sbjct: 3178 tactcctagatgaccgatagtgaaatagtaccgtgagggaat 3219
>gb|AY793788.1| Uncultured organism clone SIMO1-M13F_C05 unknown mRNA Length = 827 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 248 gaccgatagcgaactagtaccgtgagggaa 277
>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3498 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 4 tcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 507 tcctgagtgaccgatagcgaaatagtaccgcgagggaa 544
>gb|DQ313010.1| Uncultured bacterium clone 3O9C 23S ribosomal RNA gene, partial sequence Length = 805 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 307 gaccgatagcgaactagtaccgtgagggaa 336
>gb|DQ312596.1| Uncultured bacterium clone 3B8F 23S ribosomal RNA gene, partial sequence Length = 819 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 264 gaccgatagcgaactagtaccgtgagggaa 293
>gb|AE010139.1| Pyrococcus furiosus DSM 3638, section 14 of 173 of the complete genome Length = 10851 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 8194 gaccgatagcgaactagtaccgtgagggaa 8223
>gb|AY920797.1| Fabienna sphaerica large subunit 28S ribosomal RNA gene, partial sequence Length = 3246 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 |||||||||||||| ||||||||||||||| Sbjct: 280 gaccgatagcgaagaagtaccgtgagggaa 309
>gb|AY860306.1| Uncultured rhizosphere oomycete clone 1-Squ-S112 28S large subunit ribosomal RNA gene, partial sequence Length = 444 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 170 gaccgatagcgaactagtaccgtgagggaa 199
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||| ||| ||||||||||||||||| Sbjct: 466 tactcctagatgaccgatagtgaaatagtaccgtgagggaat 507
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 2025062 gaccgatagcgaactagtaccgtgagggaa 2025091
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 52.0 bits (26), Expect = 0.001 Identities = 39/42 (92%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagta-ccgtgagggaa 41 ||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 939 tactcctgggtgaccgatagccaaatagtacccgtgagggaa 980
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 193210 gaccgatagcgaactagtaccgtgagggaa 193239
>gb|DQ341895.1| Uncultured basidiomycete clone 123a_04 KBS-LTER large subunit ribosomal RNA gene, partial sequence Length = 647 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 335 gaccgatagcgaactagtaccgtgagggaa 364
>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1 Length = 2668 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 4 tcctgggtgaccgatagcgaagtagtaccgtgagggaa 41 ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 507 tcctgagtgaccgatagcgaaatagtaccgcgagggaa 544
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 640735 gaccgatagcgaactagtaccgtgagggaa 640764 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 12 gaccgatagcgaagtagtaccgtgagggaa 41 ||||||||||||| |||||||||||||||| Sbjct: 157178 gaccgatagcgaactagtaccgtgagggaa 157149
>emb|Z17212.1|MK23SRRNA Mycobacterium kansas for 23S ribosomal RNA Length = 3155 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||||| | ||||||||||||||||| Sbjct: 551 tactcctcgatgaccgatagcggaatagtaccgtgagggaat 592
>emb|Z17211.1|MG23SRRNA Mycobacterium gastri for 23S ribosomal RNA Length = 1910 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1 tactcctgggtgaccgatagcgaagtagtaccgtgagggaat 42 ||||||| | |||||||||||| | ||||||||||||||||| Sbjct: 608 tactcctcgatgaccgatagcggattagtaccgtgagggaat 649 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,136,443 Number of Sequences: 3902068 Number of extensions: 2136443 Number of successful extensions: 76621 Number of sequences better than 10.0: 15247 Number of HSP's better than 10.0 without gapping: 15192 Number of HSP's successfully gapped in prelim test: 68 Number of HSP's that attempted gapping in prelim test: 56850 Number of HSP's gapped (non-prelim): 19822 length of query: 390 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 368 effective length of database: 17,147,199,772 effective search space: 6310169516096 effective search space used: 6310169516096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)