ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet21g12 |
|---|---|
| Clone Library Name | barley_pub |
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.2 bits (69), Expect = 0.65 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 8/122 (6%) Frame = -1 Query: 360 PLPSPTPVITVASLDSYGPEIVIAKNSRLAFSDLQEAKAAL--------DQPLQALGSPP 205 P PSP P+ T AS + P + + +S + S ++ AL +P +A G Sbjct: 583 PAPSPVPLTTPASAEEAIP-LPASSDSERSASSVEGPGGALYARVARREARPARARGEIG 641 Query: 204 INSLGP*TQHLIQFPPRSQCTKEKNQMIDARAPKTPGSLAPVATNPDGRQDLPMSQEKRR 25 SL P + + PP TK K I + AP + P G + P +++R Sbjct: 642 GLSLSP-SPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAP-SPPPPGSEAAPSPSKRKR 699 Query: 24 EP 19 P Sbjct: 700 TP 701
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 30.8 bits (68), Expect = 0.84 Identities = 20/64 (31%), Positives = 26/64 (40%) Frame = -3 Query: 196 PWAMNTAPDTISPQKPVHQGKKPDD*C*SSQNPRLSCAGRHEPRWQAGPSNEPRKEKGTK 17 P A P SP + Q P C NPR SC ++ PR PS + K + Sbjct: 467 PCAQRDNPRASSPNRTA-QRDNPRTPCAQRDNPRTSCTSQNTPR---TPSTQADKTTASC 522 Query: 16 VQWE 5 +WE Sbjct: 523 SKWE 526
>FUT4_RAT (Q62994) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 433 Score = 30.4 bits (67), Expect = 1.1 Identities = 34/121 (28%), Positives = 43/121 (35%), Gaps = 15/121 (12%) Frame = +3 Query: 9 HWTL---------VPFSFLGSLEGPACHLGSWRPAQESLGFWEL*HQSSGFFPWCTGFWG 161 +WTL VP+ FL P H PA++ G + G W W Sbjct: 218 NWTLSYRTDSDIFVPYGFLY----PRSH-----PAEQPSGLGPPLARKRGLVAWVVSHWN 268 Query: 162 EIVSGAVFMAQGY*LVGIPVLATVGPRQPLPPVNQRRQV------LNFSRSQSQVRRNQE 323 E + + Q V + V GP QP+P V V L F SQ V N E Sbjct: 269 ERQARVRYYHQLRRHVSVDVFGRAGPGQPVPAVGLLHTVARYKFYLAFENSQ-HVDYNTE 327 Query: 324 K 326 K Sbjct: 328 K 328
>DTPT_LACHE (O07380) Di-/tripeptide transporter| Length = 497 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +2 Query: 5 FPLDLGSLLFSWLIGRSCLPSGFVATGAREPGVLG-ALASIIWFFSLVHWLLGG 163 F ++LGS++ WL+ + G G++ G +LA++ FF LV ++LGG Sbjct: 122 FGINLGSIIAPWLVPWAAQGFGVHIFGSQLNFHAGFSLAAVGMFFGLVQYVLGG 175
>BGLA_ENTAG (Q59437) Beta-glucosidase A (EC 3.2.1.21) (Gentiobiase)| (Beta-D-glucoside glucohydrolase) Length = 480 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = -1 Query: 312 YGPEIVIAKNSRLAFSDL---QEAKAALDQPLQALGSPPI 202 Y PEI+ KN +LAF+ + A L++ G+PP+ Sbjct: 335 YSPEIIFPKNEKLAFNGAVRPDQFSALLERVRDEYGNPPV 374
>DOME_DROME (Q9VWE0) Cytokine receptor precursor (Protein domeless)| Length = 1282 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/64 (25%), Positives = 27/64 (42%) Frame = -1 Query: 348 PTPVITVASLDSYGPEIVIAKNSRLAFSDLQEAKAALDQPLQALGSPPINSLGP*TQHLI 169 P+ A+ + P ++ ++ + SDL + K + PL G P P T + Sbjct: 1138 PSAATAAAASTFFPPAHLLNMDNYVQASDLHKLKPLVAAPLSQTGGPAFAGSSPATSPPL 1197 Query: 168 QFPP 157 Q PP Sbjct: 1198 QLPP 1201
>CADH1_MOUSE (P09803) Epithelial-cadherin precursor (E-cadherin) (Uvomorulin)| (Cadherin-1) (ARC-1) (CD324 antigen) [Contains: E-Cad/CTF1; E-Cad/CTF2; E-Cad/CTF3] Length = 884 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 53 SCLPSGFVATGAREPGVLGALASIIWFFSLVHWLL 157 +C+ +G VA G + P +LG L I+ L+ LL Sbjct: 696 NCMKAGIVAAGLQVPAILGILGGILALLILILLLL 730
>PROB_IDILO (Q5QY57) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 371 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -2 Query: 278 DLPSLIYRRQRLPWTNRCKHWDPHQSIALG 189 D+P ++RRQ P +N+ KHW H +A G Sbjct: 248 DIPGTLFRRQSDPISNK-KHWLRHTLVAQG 276
>ATP9A_MOUSE (O70228) Probable phospholipid-transporting ATPase IIA (EC 3.6.3.1)| (ATPase class II type 9A) Length = 1047 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 2 RFPLDLGSLLFSWLIGRSCLPSGFVATGAREPGVLGALASII 127 R LD+G +++SW+I R G V + P LG ++ ++ Sbjct: 348 RVNLDMGKIVYSWVIRRDSKIPGTVVRSSTIPEQLGRISYLL 389
>ATP9A_HUMAN (O75110) Probable phospholipid-transporting ATPase IIA (EC 3.6.3.1)| (ATPase class II type 9A) (ATPase IIA) Length = 1047 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 2 RFPLDLGSLLFSWLIGRSCLPSGFVATGAREPGVLGALASII 127 R LD+G +++SW+I R G V + P LG ++ ++ Sbjct: 348 RVNLDMGKIVYSWVIRRDSKIPGTVVRSSTIPEQLGRISYLL 389
>THYG_RAT (P06882) Thyroglobulin precursor| Length = 2768 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = +3 Query: 36 LGSLEGPACHL--GSWRPAQESLGFWE--L*HQSSGFFPWCTGFWGEIVSGAV 182 LG G A L G + P ++G WE H +G WC WGE++ G++ Sbjct: 1013 LGESNGTASLLWSGPYMPQCNTIGGWEPVQCHPGTGQC-WCVDGWGELIPGSL 1064
>SH2P1_MOUSE (Q62018) SH2 domain-binding protein 1 (Tetratricopeptide| repeat-containing, SH2-binding phosphoprotein of 150 kDa) (TPR-containing, SH2-binding phosphoprotein of 150 kDa) (p150TSP) Length = 1173 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -1 Query: 183 TQHLIQFPPRSQCTKEKNQMIDARAPKTPGSLAPVATNPDGRQDLPMSQEKRREPRS 13 T++++ F ++ TKEK + G N D DLP+S++K+R S Sbjct: 885 TKNILMFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPVSKKKKRRKGS 941
>SH2P1_HUMAN (Q6PD62) SH2 domain-binding protein 1| Length = 1173 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -1 Query: 183 TQHLIQFPPRSQCTKEKNQMIDARAPKTPGSLAPVATNPDGRQDLPMSQEKRREPRS 13 T++++ F ++ TKEK + G N D DLP+S++K+R S Sbjct: 885 TKNILMFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRKGS 941
>AKAP1_MOUSE (O08715) A kinase anchor protein 1, mitochondrial precursor| (Protein kinase A-anchoring protein 1) (PRKA1) (Dual-specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP) Length = 857 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 13/44 (29%) Frame = -1 Query: 93 SLAPVATNPDGRQD-------------LPMSQEKRREPRSSGNL 1 S+AP T P GR++ LP +++ RR SSGNL Sbjct: 64 SVAPTVTQPPGREEQRSVDKPSTEPLALPRTRQVRRRSESSGNL 107
>TAC2N_HUMAN (Q8N9U0) Membrane targeting tandem C2 domain-containing protein 1| (Tandem C2 protein in nucleus) (Tac2-N) Length = 490 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 168 QFPPRSQCTKEKNQMIDARAPKTPGS 91 +FPPRS+ T+ + D R K PGS Sbjct: 143 RFPPRSEVTRLYGSVCDLRTNKLPGS 168
>CAD24_HUMAN (Q86UP0) Cadherin-24 precursor| Length = 819 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -1 Query: 141 KEKNQMIDARAPKTPGSLAPVATNPDGRQDLPMSQEKRREPRSSG 7 +E + D A + P AP A P R+D+ R+PR G Sbjct: 692 EEDTEAFDITALQNPDGAAPPAPGPPARRDVLPRARVSRQPRPPG 736
>ACHAA_XENLA (P22456) Acetylcholine receptor protein, alpha-1-A subunit| precursor Length = 457 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -1 Query: 336 ITVASLDSYGPEIVIAKNSRLAFSDLQEAKAALDQPLQALGSPP 205 + + S D + P+IV+ N+ F+ +QE K LD + + PP Sbjct: 98 VRIPSSDIWRPDIVLYNNADGDFAIVQETKVLLDYTGKIIWLPP 141
>SCFD2_MOUSE (Q8BTY8) Sec1 family domain-containing protein 2 (Syntaxin-binding| protein 1-like 1) (Neuronal Sec1) Length = 684 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 9 HWTLVPFSFLGSLEGPACHLGSWRP 83 HW+ L +++GPACHL + P Sbjct: 37 HWSCGSSRLLEAVKGPACHLREFEP 61
>MNS1_YEAST (P32906) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Man(9)-alpha-mannosidase) Length = 549 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 61 AIWVRGDRRKRAWGFGSSSINHLVFFLGALASGG 162 ++W G+R + G S ++HLV F+G L + G Sbjct: 316 SLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASG 349
>KSGA_ECOL6 (Q8FL96) Dimethyladenosine transferase (EC 2.1.1.-)| (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) Length = 273 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = -1 Query: 309 GPEIVIAKNSRLAFSDLQEAKAALDQPLQALGSPPINSLGP*TQHLIQF 163 GP++ I + + F+ E A + QPL+ G+ P N P HL + Sbjct: 82 GPKLTIYQQDAMTFN-FGELAAKMGQPLRVFGNLPYNISTPLMFHLFSY 129
>HAK7_ORYSA (Q8H3P9) Potassium transporter 7 (OsHAK7)| Length = 811 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 1 KIPTGPWFPSLFLAHWKVLPAIWVRGDRRK 90 K+P G W P +F + ++ +W G RRK Sbjct: 500 KVPQGGWAPIVFAFVFMLVMYVWHYGSRRK 529
>LRC56_HUMAN (Q8IYG6) Leucine-rich repeat-containing protein 56| Length = 542 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 129 QMIDARAPKTPGSLAPVATNPDG--RQDLPMSQEKRREPRSSGN 4 + + PKTP S +A+ P G Q L S K PR SG+ Sbjct: 420 EQVHQAEPKTPSSPPSLASEPSGTSSQHLVPSPPKHPRPRDSGS 463
>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)| Length = 943 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +3 Query: 240 RQPLPPVNQRRQVLNFSRSQSQVRRNQEKQP 332 +QPLPP+ Q++Q + Q Q ++ Q++QP Sbjct: 715 QQPLPPLQQQQQ----QQQQQQQQQQQQQQP 741
>HISZ_THET2 (P62360) ATP phosphoribosyltransferase regulatory subunit| Length = 361 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -1 Query: 360 PLPSPTPVITVASLDSYGPEIVIAKNSRLAFSD-LQEAKAALDQPLQALGSPPINSLG 190 P+P + +A D YG V+ + L QEA A L++ L LG P + LG Sbjct: 192 PVPEEARKVLLALPDLYGGREVLKEARGLPLPPKAQEALAQLERTLDLLGRPVLLDLG 249
>OP1S1_BRARE (Q9W6A9) Opsin-1, short-wave-sensitive 1 (Ultraviolet-sensitive| opsin) (Ultraviolet cone photoreceptor pigment) (Opsin SWS-1) Length = 336 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = +2 Query: 17 LGSLLFSWLIGRSCLPSGFVATGAREPGVLGALASIIWF 133 +G+++F+W+IG +C F P LG W+ Sbjct: 147 VGAVVFTWIIGTACATPPFFGWSRYIPEGLGTACGPDWY 185
>CCNB3_DROME (Q9I7I0) G2/mitotic-specific cyclin-B3| Length = 575 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -1 Query: 348 PTPVITVASLDSYGPEIVIAKNSRLAFSDLQEAKAALDQPLQALGSP 208 P P +T+A Y E+ + + ++FSD Q A AAL L+ G P Sbjct: 451 PMPTLTLAR---YILELSLMDYANISFSDSQMASAALFMALRMHGGP 494
>SKI_HUMAN (P12755) Ski oncogene (C-ski)| Length = 728 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = -1 Query: 159 PRSQCTKEKNQMIDARAPKTPGSLAPVAT-NPDGRQDLPMSQEKRREPRSS 10 P + CT+ + + + P P +LAPVA D + + E R E SS Sbjct: 445 PLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDSEAEVEVESREEFTSS 495
>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent| helicase brm) (Protein brahma) Length = 1638 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/87 (24%), Positives = 34/87 (39%) Frame = -1 Query: 261 LQEAKAALDQPLQALGSPPINSLGP*TQHLIQFPPRSQCTKEKNQMIDARAPKTPGSLAP 82 +Q+ + QP Q G PPI Q PP+ Q + + + + P P Sbjct: 285 MQQGQPLPPQPPQVGGPPPIQQ---------QQPPQQQQQQSQPPPPEPHQHQLPNGGKP 335 Query: 81 VATNPDGRQDLPMSQEKRREPRSSGNL 1 ++ P G Q P+ +P+ G L Sbjct: 336 LSMGPSGGQ--PLIPSSPMQPQVRGTL 360
>SEY1_CRYNE (Q5K8P4) Protein SEY1| Length = 829 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -1 Query: 342 PVITVASLDSYGPEIVIAKNSRLAFSDLQEAKAALDQPLQALGS 211 P++ +AS ++ K R AF+D+ EA+ L QP+ A S Sbjct: 769 PILQIASTVIREIRQMVVKKLREAFADVPEAQRILAQPVTASSS 812
>GUX3_AGABI (P49075) Exoglucanase 3 precursor (EC 3.2.1.91)| (Exocellobiohydrolase 3) (1,4-beta-cellobiohydrolase 3) Length = 438 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 13/56 (23%) Frame = -3 Query: 256 GGKGCLGPTVASTG-------------IPTNQ*PWAMNTAPDTISPQKPVHQGKKP 128 GG G GPT ++G +P NQ P + T P T P G P Sbjct: 29 GGNGWTGPTTCASGSTCVKQNDFYSQCLPNNQAPPSTTTQPGTTPPATTTSGGTGP 84
>GCX1_RAT (Q76IQ7) Granulosa cell HMG box protein 1 (GCX-1)| Length = 473 Score = 27.7 bits (60), Expect = 7.2 Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 11/115 (9%) Frame = -1 Query: 357 LPSPTPVITVASLDSY-GPEIVIAKNSRLAFSDLQEA--KAALDQPLQALGSPPINSLGP 187 LP P+ + L S+ P + A S + + L AL L PP L P Sbjct: 298 LPPKQPMYAMPGLASFLTPSDLQAFRSAASPASLARTLGSKALLPGLSTSPPPPSFPLSP 357 Query: 186 *TQHLIQFPPRSQCTKEKNQMIDARAPKTPGSLAPVA--------TNPDGRQDLP 46 + PP +Q T + + AP+ P AP+A +P G QD P Sbjct: 358 SLHQQLPLPPHAQGTLLSPPLSMSPAPQPPVLPAPMALQVQLAMSPSPPGPQDFP 412
>NPW_HUMAN (Q8N729) Neuropeptide W precursor (Preproprotein L8) (hPPL8)| [Contains: Neuropeptide W-23 (NPW23) (hL8); Neuropeptide W-30 (NPW30) (hL8C)] Length = 165 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +3 Query: 210 GIPVLATVGPRQPLPPVNQRRQVLNFSRSQSQVRRNQEKQP*SPELVRAGV 362 GIPV A PR P P + + L+FS + ++RR+ + P R G+ Sbjct: 109 GIPVRAPRSPRAPEPALEP--ESLDFSGAGQRLRRDVSRPAVDPAANRLGL 157
>RBF1_CAEEL (P41885) Rabphilin-1| Length = 1106 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/71 (22%), Positives = 27/71 (38%) Frame = -1 Query: 213 SPPINSLGP*TQHLIQFPPRSQCTKEKNQMIDARAPKTPGSLAPVATNPDGRQDLPMSQE 34 +PP+ + H++ P S T +N P PV + + + S E Sbjct: 767 APPVAPISKMNGHIVSSEPTSSTTSNQNH------TSVPIPTVPVVPEEEEEKAITASTE 820 Query: 33 KRREPRSSGNL 1 EP S G++ Sbjct: 821 SASEPGSLGSI 831
>Y4XL_RHISN (P55704) Hypothetical protein y4xL| Length = 338 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/51 (33%), Positives = 19/51 (37%) Frame = -3 Query: 175 PDTISPQKPVHQGKKPDD*C*SSQNPRLSCAGRHEPRWQAGPSNEPRKEKG 23 P P V QG D Q+ L AG E WQ GPS + G Sbjct: 92 PSEQRPHARVLQGAPEHD-----QDQHLEAAGPREGSWQVGPSRSGPSQAG 137
>MFPA_BRANA (O49809) Glyoxysomal fatty acid beta-oxidation multifunctional| protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase Length = 725 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/39 (28%), Positives = 23/39 (58%) Frame = +3 Query: 216 PVLATVGPRQPLPPVNQRRQVLNFSRSQSQVRRNQEKQP 332 P +++V LPP+ + R++L F++ Q++ + K P Sbjct: 210 PWVSSVLKTDKLPPLGEAREILKFAKDQTRRQAPNMKHP 248
>KI59C_DROME (Q9W1U4) Kinesin-like protein Klp59C (Kinesin-like protein at| cytological position 59C) Length = 626 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = +3 Query: 216 PVLATVGPR-QPLPPVNQRRQVLNFSRSQSQVRRNQEKQ 329 PVLAT PR Q PPV + V R + + R +E Q Sbjct: 98 PVLATAPPRQQTAPPVREDEVVHQAERMRKERERRREAQ 136
>MMP9_RAT (P50282) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) Length = 708 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -3 Query: 238 GPTVASTGIPTNQ*PWAMNTAPDTISPQKPVHQGKKPDD 122 GPTVA TG P+ T P T P + + PDD Sbjct: 483 GPTVAPTGAPS-----PGPTGPPTAGPSEAPTESSTPDD 516
>PINK1_HUMAN (Q9BXM7) Serine/threonine-protein kinase PINK1, mitochondrial| precursor (EC 2.7.11.1) (PTEN-induced putative kinase protein 1) (BRPK) Length = 581 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = -3 Query: 100 PRLSCAGRHEPRWQAGPSNEPRK 32 P C P W AGP EPR+ Sbjct: 36 PAAGCVRGERPGWAAGPGAEPRR 58
>UL24_EBV (P03232) Protein BXRF1 (EC-RF1)| Length = 248 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = -2 Query: 107 PKPQALLRRSPRTQMAGRTFQ*AKKREGNQGPVG 6 PKP L R PR+ AGR A R+G G VG Sbjct: 211 PKPSQLTARVPRSARAGR----AGGRKGQVGAVG 240
>NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 precursor (NEL-like| protein 1) (Nel-related protein 1) Length = 810 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +2 Query: 179 CVHGPRLLIGGDPSACNGWSKAAFASCKSEKASLE 283 C GP+ G+ S C W+ A CKS S++ Sbjct: 395 CAEGPKC---GENSECKNWNTKATCECKSGYISVQ 426
>P3F2B_XENLA (P70030) POU domain, class 3, transcription factor 2-B| (Transcription factor POU3-B) (XLPOU3B) Length = 385 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -1 Query: 96 GSLAPVATNPDGRQDL-PMSQEKRREPRSSGNL 1 G AP AT+P G+QD+ P Q R E SG L Sbjct: 65 GDGAPWATSPLGQQDIKPTVQSSRDELHGSGTL 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,368,227 Number of Sequences: 219361 Number of extensions: 1490650 Number of successful extensions: 4867 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4862 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
