ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet21g01 |
|---|---|
| Clone Library Name | barley_pub |
>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum| protein MSE55) Length = 391 Score = 31.6 bits (70), Expect = 0.53 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = -1 Query: 96 SPAAGRSRGTPSPAAGRIWGESWLG 22 SP G RG PA GR WG W G Sbjct: 303 SPVGGGPRGPAGPALGRHWGAGWDG 327
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 31.2 bits (69), Expect = 0.69 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAA-GDGVPRDLPAAGERPGHP 112 P P+P + P+ P A PR P+AG RPG P Sbjct: 243 PRPSPGSMPPRPNPGAMPQRTPRPGPSAGGRPGRP 277
>ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 245 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDLP-----AAGERPGHPPA 118 PD P + +P+ RP A PR P G P HPP+ Sbjct: 77 PDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGANPSHPPS 117
>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 263 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDLP-----AAGERPGHPPA 118 PD P + +P+ RP A PR P G P HPP+ Sbjct: 83 PDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGANPSHPPS 123
>ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 252 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDLP-----AAGERPGHPPA 118 PD P + +P+ RP A PR P G P HPP+ Sbjct: 84 PDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGADPSHPPS 124
>ICP34_HHV11 (P36313) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 248 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDL-----PAAGERPGHPPA 118 PD P + +P+ RP A PR P G P HPP+ Sbjct: 83 PDSPPPESAPEARPTAAAPRPRPPPPGVGPGGGADPSHPPS 123
>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)| Length = 248 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDLP-----AAGERPGHPPA 118 PD P + +P+ RP A PR P G P HPP+ Sbjct: 83 PDSPPPEPAPEARPTAAAPRPRPPPPGVGPGGGADPSHPPS 123
>P32_MYCGA (Q49378) P32 adhesin (Cytadhesin P32)| Length = 294 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%) Frame = +2 Query: 17 PNPNQLSPQIRPAAGDGVPRDLPAAG--ERPGHP 112 PN NQ P RP G GVP A G PG P Sbjct: 228 PNMNQPRPGFRPQPGGGVPMGNKAGGGFNHPGTP 261
>ATS14_HUMAN (Q8WXS8) ADAMTS-14 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 14) (ADAM-TS 14) (ADAM-TS14) Length = 1223 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDLPAAGERPGHP 112 PDP P L P P + P+D A E PG P Sbjct: 1104 PDPGPTSLPPFSTPGSPLPGPQDPADAAEPPGKP 1137
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPR--DLPAAGERPG 106 P P + +P RP A DG P D PA G PG Sbjct: 311 PGRGPERAAPGARPTAPDGAPGRWDGPADGPAPG 344
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2160 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/36 (41%), Positives = 15/36 (41%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDLPAAGERPGHPPA 118 P P P P PA G P D P G P PPA Sbjct: 406 PAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPA 441
>CN103_MOUSE (Q80XK6) Protein C14orf103 homolog| Length = 908 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 Query: 36 RPRSGRPPAMACLAISLQPV 95 RP SGR P CL +SL P+ Sbjct: 519 RPESGRSPQECCLRVSLMPL 538
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/36 (41%), Positives = 15/36 (41%) Frame = +2 Query: 11 PDPNPNQLSPQIRPAAGDGVPRDLPAAGERPGHPPA 118 P P P P PA G P D P G P PPA Sbjct: 406 PAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPA 441
>PTPRN_MOUSE (Q60673) Receptor-type tyrosine-protein phosphatase-like N| precursor (R-PTP-N) (PTP IA-2) Length = 979 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -1 Query: 102 GRSPAAGRSRGTPSPAAGRIWGES 31 G SPAA +G P PA GR WG S Sbjct: 151 GSSPAA---QGFPRPAGGRSWGGS 171
>LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7.12.1)| Length = 575 Score = 27.7 bits (60), Expect = 7.7 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +3 Query: 39 PRSGRPPAMACLAISLQPVNGPDILLQTRS-WFPVS 143 P S PP L +S QPV P + Q S W+PVS Sbjct: 19 PHSHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVS 54
>PKNJ_MYCTU (P65732) Probable serine/threonine-protein kinase pknJ (EC| 2.7.11.1) Length = 589 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 21 TLTNSRPRSGRPPAMACLAISLQPVNGPDILLQTRSWFP 137 T+T+ +PR+ PP+ A L+ + P + TRS P Sbjct: 362 TMTSHQPRTATPPSAAALSPTSSSTTPPQPPIVTRSRLP 400
>PKNJ_MYCBO (P65733) Probable serine/threonine-protein kinase pknJ (EC| 2.7.11.1) Length = 589 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 21 TLTNSRPRSGRPPAMACLAISLQPVNGPDILLQTRSWFP 137 T+T+ +PR+ PP+ A L+ + P + TRS P Sbjct: 362 TMTSHQPRTATPPSAAALSPTSSSTTPPQPPIVTRSRLP 400
>MYCL1_MOUSE (P10166) L-myc-1 proto-oncogene protein| Length = 368 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -1 Query: 105 PGRSPAAGRSRGTPSPAAGRIWGESWLGFGSG 10 P SP G G PA+G GE W G G+G Sbjct: 39 PPTSPPWGSGPGAVDPASGINPGEPWPGGGAG 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,907,369 Number of Sequences: 219361 Number of extensions: 491279 Number of successful extensions: 2265 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2092 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2256 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
