| Clone Name | baet21d01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M31545.1|BLYGSA Barley glutamate 1-semialdehyde aminotransferase (GSA) mRNA, complete cds Length = 1620 Score = 753 bits (380), Expect = 0.0 Identities = 380/380 (100%) Strand = Plus / Plus Query: 65 gagaaggaaggcagcatcatggccggagcagcagccgccgtggcctccggcatatcgatc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gagaaggaaggcagcatcatggccggagcagcagccgccgtggcctccggcatatcgatc 60 Query: 125 aggcctgtagccgcgcctaagatctcgcgcgcgccccgctctcggtcggtggtgagggcg 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcctgtagccgcgcctaagatctcgcgcgcgccccgctctcggtcggtggtgagggcg 120 Query: 185 gccgtctccatagacgagaaggcttacacggttcagaaatccgaggagatcttcaacgcc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gccgtctccatagacgagaaggcttacacggttcagaaatccgaggagatcttcaacgcc 180 Query: 245 gccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggc 240 Query: 305 gggcagcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaat 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggcagcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaat 300 Query: 365 gaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcagatgacaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcagatgacaag 360 Query: 425 gtgaatgctgcacttattga 444 |||||||||||||||||||| Sbjct: 361 gtgaatgctgcacttattga 380
>gb|BT008916.1| Triticum aestivum clone wpa1c.pk004.m14:fis, full insert mRNA sequence Length = 1487 Score = 444 bits (224), Expect = e-121 Identities = 230/232 (99%) Strand = Plus / Plus Query: 213 cggttcagaaatccgaggagatcttcaacgccgccaaggaattgatgcctggtggtgtta 272 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1 cggttcagaaatctgaggagatcttcaacgccgccaaggaattgatgcctggaggtgtta 60 Query: 273 attcaccagtccgtgccttcaaatcagtcggcgggcagcccatagtttttgattctgtga 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 attcaccagtccgtgccttcaaatcagtcggcgggcagcccatagtttttgattctgtga 120 Query: 333 agggctctcatatgtgggatgtcgatggaaatgaatatattgattatgttggttcctggg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggctctcatatgtgggatgtcgatggaaatgaatatattgattatgttggttcctggg 180 Query: 393 gtcctgcaatcattggtcatgcagatgacaaggtgaatgctgcacttattga 444 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gtcctgcaatcattggtcatgcagatgacaaggtgaatgctgcacttattga 232
>ref|XM_483492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 311 bits (157), Expect = 1e-81 Identities = 214/233 (91%) Strand = Plus / Plus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaaggaattgatg 259 |||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||| Sbjct: 170 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgccgccaaggagttgatg 229 Query: 260 cctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggcagcccatagtt 319 ||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| || Sbjct: 230 cctgggggtgttaattcaccagttcgtgccttcaaatcagttggtgggcagcccattgtg 289 Query: 320 tttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattat 379 ||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 290 tttgattctgtgaagggttctcgtatgtgggatgtggatggaaatgaatatatcgattat 349 Query: 380 gttggttcctggggtcctgcaatcattggtcatgcagatgacaaggtgaatgc 432 |||||||||||||||||||| ||||| |||||||||||||| | ||||||||| Sbjct: 350 gttggttcctggggtcctgcgatcatcggtcatgcagatgatacggtgaatgc 402 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 25 catggccggagcagcagccgcc 46
>ref|XM_507303.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.16 mRNA Length = 1719 Score = 311 bits (157), Expect = 1e-81 Identities = 214/233 (91%) Strand = Plus / Plus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaaggaattgatg 259 |||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||| Sbjct: 227 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgccgccaaggagttgatg 286 Query: 260 cctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggcagcccatagtt 319 ||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| || Sbjct: 287 cctgggggtgttaattcaccagttcgtgccttcaaatcagttggtgggcagcccattgtg 346 Query: 320 tttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattat 379 ||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 347 tttgattctgtgaagggttctcgtatgtgggatgtggatggaaatgaatatatcgattat 406 Query: 380 gttggttcctggggtcctgcaatcattggtcatgcagatgacaaggtgaatgc 432 |||||||||||||||||||| ||||| |||||||||||||| | ||||||||| Sbjct: 407 gttggttcctggggtcctgcgatcatcggtcatgcagatgatacggtgaatgc 459 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 82 catggccggagcagcagccgcc 103
>dbj|AK104694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H12, full insert sequence Length = 1575 Score = 311 bits (157), Expect = 1e-81 Identities = 214/233 (91%) Strand = Plus / Plus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaaggaattgatg 259 |||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||| Sbjct: 170 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgccgccaaggagttgatg 229 Query: 260 cctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggcagcccatagtt 319 ||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| || Sbjct: 230 cctgggggtgttaattcaccagttcgtgccttcaaatcagttggtgggcagcccattgtg 289 Query: 320 tttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattat 379 ||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 290 tttgattctgtgaagggttctcgtatgtgggatgtggatggaaatgaatatatcgattat 349 Query: 380 gttggttcctggggtcctgcaatcattggtcatgcagatgacaaggtgaatgc 432 |||||||||||||||||||| ||||| |||||||||||||| | ||||||||| Sbjct: 350 gttggttcctggggtcctgcgatcatcggtcatgcagatgatacggtgaatgc 402 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 25 catggccggagcagcagccgcc 46
>dbj|AK064826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F06, full insert sequence Length = 1719 Score = 303 bits (153), Expect = 3e-79 Identities = 213/233 (91%) Strand = Plus / Plus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaaggaattgatg 259 |||||||| |||||||| |||| |||||||||||||||||||| |||||||| |||||| Sbjct: 227 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgcagccaaggagttgatg 286 Query: 260 cctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggcagcccatagtt 319 ||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| || Sbjct: 287 cctgggggtgttaattcaccagttcgtgccttcaaatcagttggtgggcagcccattgtg 346 Query: 320 tttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattat 379 ||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 347 tttgattctgtgaagggttctcgtatgtgggatgtggatggaaatgaatatatcgattat 406 Query: 380 gttggttcctggggtcctgcaatcattggtcatgcagatgacaaggtgaatgc 432 |||||||||||||||||||| ||||| |||||||||||||| | ||||||||| Sbjct: 407 gttggttcctggggtcctgcgatcatcggtcatgcagatgatacggtgaatgc 459 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 82 catggccggagcagcagccgcc 103
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 238 bits (120), Expect = 1e-59 Identities = 159/172 (92%) Strand = Plus / Minus Query: 249 aggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggc 308 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 26525741 aggagttgatgcctgggggtgttaattcaccagttcgtgccttcaaatcagttggtgggc 26525682 Query: 309 agcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaat 368 ||||||| || ||||||||||||||||| |||| |||||||||||| ||||||||||||| Sbjct: 26525681 agcccattgtgtttgattctgtgaagggttctcgtatgtgggatgtggatggaaatgaat 26525622 Query: 369 atattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 |||| |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 26525621 atatcgattatgttggttcctggggtcctgcgatcatcggtcatgcagatga 26525570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaagg 251 |||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 26526607 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgccgccaagg 26526556 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 26526752 catggccggagcagcagccgcc 26526731
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 238 bits (120), Expect = 1e-59 Identities = 159/172 (92%) Strand = Plus / Minus Query: 249 aggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggc 308 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 74608 aggagttgatgcctgggggtgttaattcaccagttcgtgccttcaaatcagttggtgggc 74549 Query: 309 agcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaat 368 ||||||| || ||||||||||||||||| |||| |||||||||||| ||||||||||||| Sbjct: 74548 agcccattgtgtttgattctgtgaagggttctcgtatgtgggatgtggatggaaatgaat 74489 Query: 369 atattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 |||| |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 74488 atatcgattatgttggttcctggggtcctgcgatcatcggtcatgcagatga 74437 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaagg 251 |||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 75474 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgccgccaagg 75423 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 75619 catggccggagcagcagccgcc 75598
>gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransferase mRNA, complete cds Length = 1822 Score = 111 bits (56), Expect = 2e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 245 gccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggc 304 |||||||| |||||||||| || || || || ||||| |||||||||||||| || || Sbjct: 219 gccaaggagctgatgcctggaggcgtgaactccccagttcgtgccttcaaatccgtgggt 278 Query: 305 gggcagcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaat 364 || || || || || ||||||| || || || |||| |||||||||| ||||||| ||| Sbjct: 279 ggtcaaccaattgtgattgattcagtcaaagggtctcgtatgtgggatatcgatggcaat 338 Query: 365 gaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 || || ||||| || |||||||||||||||||||||||||||||||| || ||||| Sbjct: 339 gagtacattgactacgttggttcctggggtcctgcaatcattggtcacgctgatga 394
>gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminotransferase (Gsa1) gene, complete cds Length = 1974 Score = 107 bits (54), Expect = 3e-20 Identities = 138/166 (83%) Strand = Plus / Plus Query: 255 tgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggcagccca 314 |||||||||| || || || || ||||| |||||||||||||| || || || || || | Sbjct: 452 tgatgcctggaggcgtgaactccccagttcgtgccttcaaatccgtgggtggtcaaccaa 511 Query: 315 tagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattg 374 | || ||||||| || || || |||| |||||||||| ||||||| ||||| || |||| Sbjct: 512 ttgtgattgattcagtcaaagggtctcgtatgtgggatatcgatggcaatgagtacattg 571 Query: 375 attatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 | || |||||||||||||||||||||||||||||||| || ||||| Sbjct: 572 actacgttggttcctggggtcctgcaatcattggtcacgctgatga 617
>emb|X65973.1|NTGSAMR1 N.tabacum mRNA for glutamate-1-semialdehyde aminotransferase Length = 1733 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Plus Query: 245 gccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggc 304 |||||||| |||||||| || ||||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct: 300 gccaaggagttgatgccaggaggtgtaaattccccagttcgtgctttcaagtcagttggc 359 Query: 305 gggcagcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaat 364 || || || || || |||| || ||||||||||||| |||| |||| | ||||| || Sbjct: 360 ggacaacctatcattattgactccgtgaagggctctcgtatgcgggacatagatggtaac 419 Query: 365 gaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 || || ||||| ||||| || || |||||||| || || || |||||||||||||| Sbjct: 420 gagtacattgactatgtcggatcatggggtccagctataatcggtcatgcagatga 475
>ref|XM_483493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaagg 251 |||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 226 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgccgccaagg 277 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 81 catggccggagcagcagccgcc 102
>gb|BT013916.1| Lycopersicon esculentum clone 132913F, mRNA sequence Length = 1637 Score = 71.9 bits (36), Expect = 2e-09 Identities = 141/176 (80%) Strand = Plus / Plus Query: 245 gccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggc 304 |||||||| |||||||| || ||||| ||||| || |||||||| ||||| ||||| ||| Sbjct: 283 gccaaggagttgatgccaggaggtgtaaattcccctgtccgtgctttcaagtcagttggc 342 Query: 305 gggcagcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaat 364 || || || || || |||| || ||||||||||||| |||| |||| | ||||| || Sbjct: 343 ggacaacctatcattattgactccgtgaagggctctcgtatgcgggacatagatggtaac 402 Query: 365 gaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 || || ||||| ||||| || || ||||| || || || ||||||||||| ||||| Sbjct: 403 gagtacattgactatgtcggatcatggggaccagctataattggtcatgcggatga 458
>dbj|AK062854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A07, full insert sequence Length = 888 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 200 gagaaggcttacacggttcagaaatccgaggagatcttcaacgccgccaagg 251 |||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 226 gagaaggcgtacacggtggagaagtccgaggagatcttcaacgccgccaagg 277 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 catggccggagcagcagccgcc 103 |||||||||||||||||||||| Sbjct: 81 catggccggagcagcagccgcc 102
>gb|L39279.1|TOMGSAAM Lycopersicon esculentum (clone GFPGSAAM) glutamate 1-semialdehyde 2,1-aminomutase mRNA, complete cds Length = 1664 Score = 71.9 bits (36), Expect = 2e-09 Identities = 141/176 (80%) Strand = Plus / Plus Query: 245 gccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggc 304 |||||||| |||||||| || ||||| ||||| || |||||||| ||||| ||||| ||| Sbjct: 223 gccaaggagttgatgccaggaggtgtaaattcccctgtccgtgctttcaagtcagttggc 282 Query: 305 gggcagcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaat 364 || || || || || |||| || ||||||||||||| |||| |||| | ||||| || Sbjct: 283 ggacaacctatcattattgactccgtgaagggctctcgtatgcgggacatagatggtaac 342 Query: 365 gaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 || || ||||| ||||| || || ||||| || || || ||||||||||| ||||| Sbjct: 343 gagtacattgactatgtcggatcatggggaccagctataattggtcatgcggatga 398
>ref|NM_114732.3| Arabidopsis thaliana glutamate-1-semialdehyde 2,1-aminomutase/ pyridoxal phosphate binding / transaminase AT3G48730 mRNA, complete cds Length = 1645 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 356 gatggaaatgaatatattgattatgttggttcctggggtcctgcaatcattggtcatgca 415 |||||||||||||| ||||| |||||||| || ||||| ||||| || ||||||||||| Sbjct: 357 gatggaaatgaatacattgactatgttggatcttggggacctgctataattggtcatgct 416 Query: 416 gatga 420 ||||| Sbjct: 417 gatga 421
>gb|BT025324.1| Arabidopsis thaliana At3g48730 mRNA, complete cds Length = 1419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 356 gatggaaatgaatatattgattatgttggttcctggggtcctgcaatcattggtcatgca 415 |||||||||||||| ||||| |||||||| || ||||| ||||| || ||||||||||| Sbjct: 283 gatggaaatgaatacattgactatgttggatcttggggacctgctataattggtcatgct 342 Query: 416 gatga 420 ||||| Sbjct: 343 gatga 347
>emb|AL133315.1|ATT8P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T8P19 Length = 96679 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 356 gatggaaatgaatatattgattatgttggttcctggggtcctgcaatcattggtcatgca 415 |||||||||||||| ||||| |||||||| || ||||| ||||| || ||||||||||| Sbjct: 85792 gatggaaatgaatacattgactatgttggatcttggggacctgctataattggtcatgct 85851 Query: 416 gatga 420 ||||| Sbjct: 85852 gatga 85856
>emb|BX842127.1|CNS09YB6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1514 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 356 gatggaaatgaatatattgattatgttggttcctggggtcctgcaatcattggtcatgca 415 |||||||||||||| ||||| |||||||| || ||||| ||||| || ||||||||||| Sbjct: 261 gatggaaatgaatacattgactatgttggatcttggggacctgctataattggtcatgct 320 Query: 416 gatga 420 ||||| Sbjct: 321 gatga 325
>gb|U10278.1|ATU10278 Arabidopsis thaliana Columbia glutamate-1-semialdehyde aminotransferase (gsa2) gene, complete cds Length = 2416 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 356 gatggaaatgaatatattgattatgttggttcctggggtcctgcaatcattggtcatgca 415 |||||||||||||| ||||| |||||||| || ||||| ||||| || ||||||||||| Sbjct: 946 gatggaaatgaatacattgactatgttggatcttggggacctgctataattggtcatgct 1005 Query: 416 gatga 420 ||||| Sbjct: 1006 gatga 1010
>emb|X65974.1|NTGSAMR2 N.tabacum mRNA for glutamate-1-semialdehyde aminotransferase Length = 1715 Score = 63.9 bits (32), Expect = 4e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 245 gccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggc 304 |||||||| |||||||| || ||||| ||||| || || || || ||||| ||||| ||| Sbjct: 294 gccaaggagttgatgccaggaggtgtaaattcccctgttcgcgctttcaagtcagttggc 353 Query: 305 gggcagcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaat 364 || || || || || |||| || ||||||||||||| |||| |||| | ||||| || Sbjct: 354 ggacaacctatcattattgactccgtgaagggctctcgtatgcgggacatagatggtaac 413 Query: 365 gaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 || || ||||| ||||| || || |||||||| || || || |||||||||||||| Sbjct: 414 gactacattgactatgtcggatcatggggtccagctataatcggtcatgcagatga 469
>gb|AF411807.1| Lycopersicon esculentum BAC clone Clemson_Id 127E11, complete sequence Length = 95845 Score = 63.9 bits (32), Expect = 4e-07 Identities = 137/172 (79%) Strand = Plus / Minus Query: 249 aggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggc 308 |||| |||||||| || ||||| ||||| || |||||||| ||||| ||||| ||||| | Sbjct: 89209 aggagttgatgccaggaggtgtaaattcccctgtccgtgctttcaagtcagttggcggac 89150 Query: 309 agcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaat 368 | || || || |||| || ||||||||||||| |||| |||| | ||||| || || | Sbjct: 89149 aacctatcattattgactccgtgaagggctctcgtatgcgggacatagatggtaacgagt 89090 Query: 369 atattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 | ||||| ||||| || || ||||| || || || ||||||||||| ||||| Sbjct: 89089 acattgactatgtcggatcatggggaccagctataattggtcatgcggatga 89038
>emb|BX824602.1|CNS0A5PJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZG05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1512 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 357 atggaaatgaatatattgattatgttggttcctggggtcctgcaatcattggtcatgcag 416 ||||||||||||| ||||| |||||||| || ||||| ||||| || ||||||||||| | Sbjct: 321 atggaaatgaatacattgactatgttggatcttggggacctgctataattggtcatgctg 380 Query: 417 atga 420 |||| Sbjct: 381 atga 384
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 63.9 bits (32), Expect = 4e-07 Identities = 137/172 (79%) Strand = Plus / Plus Query: 249 aggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggc 308 ||||||||||||| || ||||| || ||||| || |||||||||||||| || || || | Sbjct: 78278 aggaattgatgcccggaggtgtcaactcacctgttcgtgccttcaaatctgtgggtggac 78337 Query: 309 agcccatagtttttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaat 368 |||| || || |||| || || || || | || |||||||| | ||||| ||||| | Sbjct: 78338 agccaattcttattgactcagtcaaaggatgtcgcatgtgggacattgatggcaatgagt 78397 Query: 369 atattgattatgttggttcctggggtcctgcaatcattggtcatgcagatga 420 | ||||| || |||||||| ||||| |||||||| |||||||| || ||||| Sbjct: 78398 acattgactacgttggttcttgggggcctgcaattattggtcacgctgatga 78449
>ref|NM_125752.2| Arabidopsis thaliana GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE); glutamate-1-semialdehyde 2,1-aminomutase AT5G63570 (GSA1) mRNA, complete cds Length = 1726 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 321 ttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattatg 380 |||||||||| || ||||| | |||||||| | ||||||||||| |||||||| || | Sbjct: 334 ttgattctgttaaaggctcaaaaatgtgggacattgatggaaatgagtatattgactacg 393 Query: 381 ttggttcctggggtcctgcaatcattggtcatgcagatgacaaggt 426 |||| || ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 394 ttggctcttggggacctgctattattggccatgctgatgacgaggt 439
>gb|AY139804.1| Arabidopsis thaliana At5g63570/MBK5_3 mRNA, complete cds Length = 1425 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 321 ttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattatg 380 |||||||||| || ||||| | |||||||| | ||||||||||| |||||||| || | Sbjct: 254 ttgattctgttaaaggctcaaaaatgtgggacattgatggaaatgagtatattgactacg 313 Query: 381 ttggttcctggggtcctgcaatcattggtcatgcagatgacaaggt 426 |||| || ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 314 ttggctcttggggacctgctattattggccatgctgatgacgaggt 359
>gb|AY102109.1| Arabidopsis thaliana AT5g63570/MBK5_3 mRNA, complete cds Length = 1726 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 321 ttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattatg 380 |||||||||| || ||||| | |||||||| | ||||||||||| |||||||| || | Sbjct: 334 ttgattctgttaaaggctcaaaaatgtgggacattgatggaaatgagtatattgactacg 393 Query: 381 ttggttcctggggtcctgcaatcattggtcatgcagatgacaaggt 426 |||| || ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 394 ttggctcttggggacctgctattattggccatgctgatgacgaggt 439
>emb|BX830757.1|CNS0A1LT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1677 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 321 ttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattatg 380 |||||||||| || ||||| | |||||||| | ||||||||||| |||||||| || | Sbjct: 288 ttgattctgttaaaggctcaaaaatgtgggacattgatggaaatgagtatattgactacg 347 Query: 381 ttggttcctggggtcctgcaatcattggtcatgcagatgacaaggt 426 |||| || ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 348 ttggctcttggggacctgctattattggccatgctgatgacgaggt 393
>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5 Length = 89779 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 321 ttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattatg 380 |||||||||| || ||||| | |||||||| | ||||||||||| |||||||| || | Sbjct: 5490 ttgattctgttaaaggctcaaaaatgtgggacattgatggaaatgagtatattgactacg 5549 Query: 381 ttggttcctggggtcctgcaatcattggtcatgcagatgacaaggt 426 |||| || ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 5550 ttggctcttggggacctgctattattggccatgctgatgacgaggt 5595
>gb|U03773.1|ATU03773 Arabidopsis thaliana Columbia glutamate-1-semialdehyde-2,1-aminomutase (gsa1) gene Length = 3204 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 321 ttgattctgtgaagggctctcatatgtgggatgtcgatggaaatgaatatattgattatg 380 |||||||||| || ||||| | |||||||| | ||||||||||| |||||||| || | Sbjct: 1572 ttgattctgttaaaggctcaaaaatgtgggacattgatggaaatgagtatattgactacg 1631 Query: 381 ttggttcctggggtcctgcaatcattggtcatgcagatgacaaggt 426 |||| || ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 1632 ttggctcttggggacctgctattattggccatgctgatgacgaggt 1677
>gb|AF366293.1| Brassica napus glutamate 1-semialdehyde aminotransferase (Gsa) mRNA, complete cds; nuclear gene for chloroplast product Length = 1651 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 236 ttcaacgccgccaaggaattgatgcctggtggtgttaattcaccagtccgtgccttcaaa 295 |||||||| |||||||| |||||||||| ||||| || || || ||||| ||||||||| Sbjct: 217 ttcaacgcagccaaggatctgatgcctggaggtgtgaactcccctgtccgagccttcaaa 276 Query: 296 tcagtcggcgg 306 || || ||||| Sbjct: 277 tccgttggcgg 287
>gb|AE009409.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 179 of 187 of the complete sequence Length = 12457 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 347 tgggatgtcgatggaaatgaatatat 372 |||||||||||||||||||||||||| Sbjct: 1337 tgggatgtcgatggaaatgaatatat 1312
>gb|AE008205.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 9 of 187 of the complete sequence Length = 12850 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 347 tgggatgtcgatggaaatgaatatat 372 |||||||||||||||||||||||||| Sbjct: 8335 tgggatgtcgatggaaatgaatatat 8360
>emb|AL596169.1| Listeria innocua Clip11262 complete genome, segment 7/12 Length = 239050 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 353 gtcgatggaaatgaatatattgatta 378 |||||||||||||||||||||||||| Sbjct: 43790 gtcgatggaaatgaatatattgatta 43765
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 257 atgcctggtggtgttaattcaccagtccgtgccttcaaatcagtcggcgggcagcccata 316 ||||| ||||| || | |||||| || ||||||||||| || |||||||| |||||||| Sbjct: 474723 atgcccggtggcgtcagttcacccgtgcgtgccttcaagtccgtcggcggccagcccatt 474782 Query: 317 gtttttgat 325 || |||||| Sbjct: 474783 gtctttgat 474791
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 368 tatattgattatgttggttcctggggtcc 396 |||||||||||||||||||| |||||||| Sbjct: 2389027 tatattgattatgttggttcttggggtcc 2389055
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 260 cctggtggtgttaattcaccagtccgtgc 288 |||||||| |||||||||||||||||||| Sbjct: 1561862 cctggtggcgttaattcaccagtccgtgc 1561890
>gb|AF279106.2| Uncultured marine gamma proteobacterium EBAC31A08 BAC sequence Length = 128758 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 362 aatgaatatattgattatgttggttcctggggtcc 396 |||||||||||||||||| |||| || |||||||| Sbjct: 25929 aatgaatatattgattatattgggtcttggggtcc 25895
>emb|CR719807.3|CNS0GICL Tetraodon nigroviridis full-length cDNA Length = 549 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 84 tggccggagcagcagccgccgtggcct 110 ||||| ||||||||||||||||||||| Sbjct: 333 tggcctgagcagcagccgccgtggcct 307
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 362 aatgaatatattgattatgttggttcctggggtcc 396 |||||||||||||||||| || |||| |||||||| Sbjct: 1193879 aatgaatatattgattatatttgttcatggggtcc 1193845
>dbj|AB050120.1| Amaranthus tricolor GSA-AT mRNA for glutamate-1-semialdehyde aminotransferase, partial cds Length = 930 Score = 46.1 bits (23), Expect = 0.097 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 tatattgattatgttggttcctggggtcctgcaatcattggtcatgc 414 ||||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 7 tatattgattatgttggctcatggggacccgctattattggtcatgc 53
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 368 tatattgattatgttggttcctgggg 393 ||||| |||||||||||||||||||| Sbjct: 3773041 tatatagattatgttggttcctgggg 3773066
>ref|XM_613401.2| PREDICTED: Bos taurus similar to phosphatidylinositol transfer protein, membrane-associated (LOC533859), mRNA Length = 4181 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 gccggagcagcagccgccgtgg 107 |||||||||||||||||||||| Sbjct: 1961 gccggagcagcagccgccgtgg 1982
>gb|AF269487.1|AF269487 Staphylococcus epidermidis strain SR1 clone step.1005g04 genomic sequence Length = 3456 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 gatggaaatgaatatattgattatgt 381 |||||||||||||| ||||||||||| Sbjct: 1613 gatggaaatgaatacattgattatgt 1588
>gb|AF269358.1|AF269358 Staphylococcus epidermidis strain SR1 clone step.1002e10 genomic sequence Length = 4012 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 gatggaaatgaatatattgattatgt 381 |||||||||||||| ||||||||||| Sbjct: 3679 gatggaaatgaatacattgattatgt 3654
>gb|AF269933.1|AF269933 Staphylococcus epidermidis strain SR1 clone step.1033a07 genomic sequence Length = 3059 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 gatggaaatgaatatattgattatgt 381 |||||||||||||| ||||||||||| Sbjct: 411 gatggaaatgaatacattgattatgt 386
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 gatggaaatgaatatattgattatgt 381 |||||||||||||| ||||||||||| Sbjct: 1267432 gatggaaatgaatacattgattatgt 1267407
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 350 gatgtcgatggaaatgaatatattgattat 379 ||||| ||||||||||||||||| |||||| Sbjct: 1350419 gatgttgatggaaatgaatatatagattat 1350448
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 gatggaaatgaatatattgattatgt 381 |||||||||||||| ||||||||||| Sbjct: 1372795 gatggaaatgaatacattgattatgt 1372770
>gb|BC081472.1| Danio rerio purine-rich element binding protein A, mRNA (cDNA clone MGC:103411 IMAGE:7232829), complete cds Length = 1116 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 gggagaaggaaggcagcatcatggc 87 ||||||||| ||||||||||||||| Sbjct: 197 gggagaaggcaggcagcatcatggc 221
>gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, complete sequence Length = 209336 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tcccaccaaaccccttctctt 23 ||||||||||||||||||||| Sbjct: 51306 tcccaccaaaccccttctctt 51286
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 368 tatattgattatgttggttcctggggtcc 396 ||||||||||||||||| || |||||||| Sbjct: 201079 tatattgattatgttggctcttggggtcc 201107
>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12 Length = 240050 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 350 gatgtcgatggaaatgaatatattgatta 378 ||||| ||||| ||||||||||||||||| Sbjct: 180320 gatgttgatggtaatgaatatattgatta 180292
>dbj|AK034323.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330177I17 product:hypothetical SAM domain (Sterile alpha motif) containing protein, full insert sequence Length = 2857 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 cggagcagcagccgccgtggcctcc 112 |||||| |||||||||||||||||| Sbjct: 158 cggagccgcagccgccgtggcctcc 134
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 345 tgtgggatgtcgatggaaatgaata 369 ||||||||||||||||||| ||||| Sbjct: 3155784 tgtgggatgtcgatggaaacgaata 3155760
>gb|AF184956.1|AF184956 Bacillus subtilis mycosubtilin operon, complete sequence Length = 46860 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 atgtgggatgtcgatggaaatgaatatat 372 ||||||||| | ||||||||||||||||| Sbjct: 7775 atgtgggatattgatggaaatgaatatat 7803
>gb|AY152854.1| Polytomella sp. Pringsheim 198.80 glutamate 1-semialdehyde aminotransferase (gsa) mRNA, complete cds Length = 1756 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 260 cctggtggtgttaattcaccagtccgtgccttc 292 ||||||||||| || || ||||||||||||||| Sbjct: 192 cctggtggtgtgaactctccagtccgtgccttc 224
>dbj|AP007296.1| Lotus japonicus genomic DNA, clone:LjT02J24, TM0401, complete sequence Length = 71160 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 216 ttcagaaatccgaggagatcttcaa 240 |||||| |||||||||||||||||| Sbjct: 28626 ttcagagatccgaggagatcttcaa 28650
>gb|AC100269.7| Mus musculus chromosome 5, clone RP23-67B9, complete sequence Length = 237273 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cctggtggtgttaattcacc 279 |||||||||||||||||||| Sbjct: 105911 cctggtggtgttaattcacc 105930
>ref|XM_476075.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 gccggagcagcagccgccgtggcctccg 113 |||| |||||||||||||| |||||||| Sbjct: 149 gccgcagcagcagccgccgcggcctccg 122
>ref|XM_530694.1| PREDICTED: Pan troglodytes LOC461057 (LOC461057), mRNA Length = 724 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ttggttcctggggtcctgca 400 |||||||||||||||||||| Sbjct: 260 ttggttcctggggtcctgca 241
>ref|XM_473522.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1395 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcgcgcgccccgctctcgg 169 |||||||||||||||||||| Sbjct: 321 cgcgcgcgccccgctctcgg 340
>ref|XM_473518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1395 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcgcgcgccccgctctcgg 169 |||||||||||||||||||| Sbjct: 321 cgcgcgcgccccgctctcgg 340
>gb|BT017974.1| Zea mays clone EL01N0524E05.c mRNA sequence Length = 1117 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 agatctcgcgcgcgccccgc 163 |||||||||||||||||||| Sbjct: 116 agatctcgcgcgcgccccgc 97
>gb|AC004636.1| Homo sapiens chromosome 5, P1 clone 1268h6 (LBNL H50), complete sequence Length = 78293 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 aaatgaatatattgattatg 380 |||||||||||||||||||| Sbjct: 5073 aaatgaatatattgattatg 5092
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 366 aatatattgattatgttggttcctgggg 393 ||||||||||||||||||| || ||||| Sbjct: 1700794 aatatattgattatgttggatcatgggg 1700767
>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete sequence Length = 188848 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tcccaccaaaccccttctct 22 |||||||||||||||||||| Sbjct: 120990 tcccaccaaaccccttctct 121009
>gb|AC138287.10| Mus musculus chromosome 1, clone RP24-361E12, complete sequence Length = 150190 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cctggtggtgttaattcacc 279 |||||||||||||||||||| Sbjct: 145428 cctggtggtgttaattcacc 145409
>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence Length = 206903 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 aaatgaatatattgattatg 380 |||||||||||||||||||| Sbjct: 51195 aaatgaatatattgattatg 51214
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tcccaccaaaccccttctct 22 |||||||||||||||||||| Sbjct: 179749 tcccaccaaaccccttctct 179768
>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence Length = 246177 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tcccaccaaaccccttctct 22 |||||||||||||||||||| Sbjct: 239989 tcccaccaaaccccttctct 240008
>gb|AC132451.3| Mus musculus BAC clone RP23-194C20 from chromosome 8, complete sequence Length = 188539 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gatggaaatgaatatattga 375 |||||||||||||||||||| Sbjct: 16858 gatggaaatgaatatattga 16877
>gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome 6, complete sequence Length = 182355 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cctggtggtgttaattcacc 279 |||||||||||||||||||| Sbjct: 108725 cctggtggtgttaattcacc 108706
>emb|AJ248286.2|CNSPAX04 Pyrococcus abyssi complete genome; segment 4/6 Length = 287130 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gagatcttcaacgccgccaa 249 |||||||||||||||||||| Sbjct: 209872 gagatcttcaacgccgccaa 209891
>gb|AC108820.13| Mus musculus chromosome 8, clone RP23-10I8, complete sequence Length = 227289 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gatggaaatgaatatattga 375 |||||||||||||||||||| Sbjct: 211243 gatggaaatgaatatattga 211262
>gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, complete sequence Length = 154751 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttctcttatcccctcctc 34 |||||||||||||||||||| Sbjct: 137148 ccttctcttatcccctcctc 137167
>gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence Length = 146259 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttctcttatcccctcctc 34 |||||||||||||||||||| Sbjct: 69557 ccttctcttatcccctcctc 69576
>emb|AL008723.8|HS90G24 Human DNA sequence from clone RP1-90G24 on chromosome 22 Contains the 5' end of a novel gene, the RFPL2 gene for ret finger protein-like 2, a Immunoglobulin Lambda Light Chain C region (IGLC) pseudogene (IGLCOR22-1), the SLC5A4 gene for solute carrier family 5 (low affinity glucose cotransporter), member 4 and a pseudogene similar to part of cleavage and polyadenylation specific factor 1, 160kDa (CPSF1), complete sequence Length = 154414 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 ccatagtttttgattctgtg 331 |||||||||||||||||||| Sbjct: 149822 ccatagtttttgattctgtg 149841
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 366 aatatattgattatgttggttcctgggg 393 ||||||||||||||||||| || ||||| Sbjct: 1659378 aatatattgattatgttggatcttgggg 1659405
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 366 aatatattgattatgttggttcctgggg 393 ||||||||||||||||||| || ||||| Sbjct: 1666755 aatatattgattatgttggatcatgggg 1666728
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gattatgttggttcctgggg 393 |||||||||||||||||||| Sbjct: 1201739 gattatgttggttcctgggg 1201758
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 350 gatgtcgatggaaatgaatatattgattatgttggttcctgggg 393 ||||||||||| || | |||||| || ||||| ||||||||||| Sbjct: 235364 gatgtcgatggcaaagcatatatcgactatgtcggttcctgggg 235321
>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence Length = 215150 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tggggtcctgcaatcattgg 408 |||||||||||||||||||| Sbjct: 104294 tggggtcctgcaatcattgg 104313
>gb|AC158628.7| Mus musculus 6 BAC RP23-147K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188746 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 aaatgaatatattgattatg 380 |||||||||||||||||||| Sbjct: 46566 aaatgaatatattgattatg 46547
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcgcgcgccccgctctcgg 169 |||||||||||||||||||| Sbjct: 28310270 cgcgcgcgccccgctctcgg 28310289 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcgcgcgccccgctctcgg 169 |||||||||||||||||||| Sbjct: 28288727 cgcgcgcgccccgctctcgg 28288746
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 gccggagcagcagccgccgtggcctccg 113 |||| |||||||||||||| |||||||| Sbjct: 5308883 gccgcagcagcagccgccgcggcctccg 5308856
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tcgccgcacccgacgacatc 60 |||||||||||||||||||| Sbjct: 2178848 tcgccgcacccgacgacatc 2178867
>gb|AC019103.8| Homo sapiens BAC clone RP11-460I19 from 4, complete sequence Length = 177950 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ttggttcctggggtcctgca 400 |||||||||||||||||||| Sbjct: 82194 ttggttcctggggtcctgca 82175
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 350 gatgtcgatggaaatgaatatattgattatgttggttcctgggg 393 ||||||||||| || | |||||| || ||||| ||||||||||| Sbjct: 242628 gatgtcgatggcaaagcatatatcgactatgtcggttcctgggg 242585
>gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F24B9 sequence, complete sequence Length = 107234 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcgatggaaatgaatatatt 373 |||||||||||||||||||| Sbjct: 57045 tcgatggaaatgaatatatt 57064
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aatgaatatattgattatgt 381 |||||||||||||||||||| Sbjct: 2093321 aatgaatatattgattatgt 2093302
>gb|AC113286.11| Mus musculus chromosome 1, clone RP23-411P10, complete sequence Length = 204629 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cctggtggtgttaattcacc 279 |||||||||||||||||||| Sbjct: 59125 cctggtggtgttaattcacc 59106
>dbj|AK111866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040N14, full insert sequence Length = 1753 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcgcgcgccccgctctcgg 169 |||||||||||||||||||| Sbjct: 389 cgcgcgcgccccgctctcgg 408
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 350 gatgtcgatggaaatgaatatattgattatgttggttcctgggg 393 ||||||||||| || | |||||| || ||||| ||||||||||| Sbjct: 235355 gatgtcgatggcaaagcatatatcgactatgtcggttcctgggg 235312
>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence Length = 1332022 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gaaatgaatatattgattat 379 |||||||||||||||||||| Sbjct: 287968 gaaatgaatatattgattat 287987
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 350 gatgtcgatggaaatgaatatattgattatgttggttcctgggg 393 ||||||||||| || | |||||| || ||||| ||||||||||| Sbjct: 234469 gatgtcgatggcaaagcatatatcgactatgtcggttcctgggg 234426
>gb|AC118544.7| Mus musculus strain C57BL/6J chromosome 5 clone rp23-287c8, complete sequence Length = 205079 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cctggtggtgttaattcacc 279 |||||||||||||||||||| Sbjct: 124410 cctggtggtgttaattcacc 124429
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tcatcttctcgccgcacccg 52 |||||||||||||||||||| Sbjct: 1191390 tcatcttctcgccgcacccg 1191409
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcgcgcgccccgctctcgg 169 |||||||||||||||||||| Sbjct: 102578 cgcgcgcgccccgctctcgg 102597 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcgcgcgccccgctctcgg 169 |||||||||||||||||||| Sbjct: 81035 cgcgcgcgccccgctctcgg 81054
>gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosome 19, complete sequence Length = 148454 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tcccaccaaaccccttctct 22 |||||||||||||||||||| Sbjct: 58751 tcccaccaaaccccttctct 58770
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 350 gatgtcgatggaaatgaatatattgattatgt 381 ||||| ||||| || ||||||||||||||||| Sbjct: 1570028 gatgttgatggtaacgaatatattgattatgt 1569997
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 gccggagcagcagccgccgtggcctccg 113 |||| |||||||||||||| |||||||| Sbjct: 45584 gccgcagcagcagccgccgcggcctccg 45557 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,679,322 Number of Sequences: 3902068 Number of extensions: 3679322 Number of successful extensions: 70063 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69536 Number of HSP's gapped (non-prelim): 525 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)