ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet21c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071344.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 3e-79
2gb|BT016434.1| Zea mays clone Contig267 mRNA sequence 170 3e-39
3gb|AY104647.1| Zea mays PCO146189 mRNA sequence 170 3e-39
4dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
6dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
7dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
8gb|BT017419.1| Zea mays clone EL01N0402C12.c mRNA sequence 94 5e-16
9emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19... 46 0.099
10gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.39
11emb|BX571974.6| Zebrafish DNA sequence from clone DKEY-29P4 in l... 44 0.39
12ref|XM_684032.1| PREDICTED: Danio rerio similar to CG15329-PA (L... 44 0.39
13gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.39
14gb|BC042276.1| Xenopus laevis serine hydroxymethyltransferase 1 ... 42 1.6
15gb|AC105173.10| Mus musculus chromosome 8, clone RP23-319J15, co... 40 6.1
16gb|BT017884.1| Zea mays clone EL01N0514G01.c mRNA sequence 40 6.1
17ref|XM_364795.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.1
18gb|AC134442.4| Mus musculus BAC clone RP24-104I4 from chromosome... 40 6.1
19gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, co... 40 6.1
20ref|XM_546282.2| PREDICTED: Canis familiaris similar to Heart- a... 40 6.1
21gb|AY197475.1| Helicobacter pylori strain GU93-213 Hsp12 variant... 40 6.1
22gb|AC099676.2| Homo sapiens chromosome 1 clone RP11-465N4, compl... 40 6.1
23gb|AC090797.5| Homo sapiens chromosome 8, clone RP11-586K2, comp... 40 6.1
24gb|AC020807.2| Mus musculus chromosome 18 clone RG-MBAC_225G20, ... 40 6.1
25gb|AC090980.5| Homo sapiens chromosome 8, clone RP11-433O22, com... 40 6.1
26gb|AC091750.1|AC091750 Mus musculus chromosome 18 clone unknown,... 40 6.1
27gb|DQ003082.1| Homo sapiens matrix metalloproteinase 16 (membran... 40 6.1
28gb|AC140361.2| Mus musculus BAC clone RP24-247B3 from chromosome... 40 6.1
29gb|AY104013.1| Zea mays PCO085678 mRNA sequence 40 6.1
30emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chro... 40 6.1
31emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on ch... 40 6.1
32gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, ... 40 6.1

>dbj|AK071344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091E24, full
           insert sequence
          Length = 1114

 Score =  303 bits (153), Expect = 3e-79
 Identities = 303/353 (85%)
 Strand = Plus / Plus

                                                                       
Query: 103 cgccatggacatggcagcgatgaacgacccggagaggctcttcttcttcgacctcgcctg 162
           |||||||||||||| |||||||| ||| || |||||| | |||||||||||||| || ||
Sbjct: 134 cgccatggacatgggagcgatgagcgatcctgagaggatgttcttcttcgacctggcatg 193

                                                                       
Query: 163 caagaccgccaaggccacctacgacgagaacccgctcgacgccgacaacctgacgcgatg 222
           | ||| |||||||| |||||||||  ||||||||| |||||||||||| ||  |||| ||
Sbjct: 194 ccagaacgccaaggtcacctacgaacagaacccgcacgacgccgacaatctcgcgcggtg 253

                                                                       
Query: 223 gggcggcgctctgctggagctgtcgcagatgcataacggcccggagagcctcaagtgcct 282
           ||| ||||| ||||| ||||| ||||||||||  |||||||| |||||||||||||||||
Sbjct: 254 gggaggcgcgctgctcgagctctcgcagatgcggaacggccccgagagcctcaagtgcct 313

                                                                       
Query: 283 cgaagatgcggagtctaagctggatgaagcactgagaattgatcccaacaaggctgatgc 342
            ||||||||||| || |||||||| |||||||||| |||||||||||  ||||| |||||
Sbjct: 314 agaagatgcggaatccaagctggaggaagcactgaaaattgatcccatgaaggcggatgc 373

                                                                       
Query: 343 actctggtgcttggggaatgccctgacctctcgtggattcttcacttcggaaactgtcca 402
            || ||||||||||| ||||| | |||||||| ||||||||||||||| || |||||| |
Sbjct: 374 gctttggtgcttgggaaatgcacagacctctcatggattcttcacttcagacactgtcaa 433

                                                                
Query: 403 ggctaatgaatgctttgaaaaagcaactggttgtttccagagggctgttgatg 455
           ||| ||||||| ||||||||| |||||    |||||||||| |||||||||||
Sbjct: 434 ggccaatgaattctttgaaaaggcaacgcagtgtttccagaaggctgttgatg 486



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>gb|BT016434.1| Zea mays clone Contig267 mRNA sequence
          Length = 1065

 Score =  170 bits (86), Expect = 3e-39
 Identities = 164/190 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 cgacgccgacaacctgacgcgatggggcggcgctctgctggagctgtcgcagatgcataa 258
           ||||||||||||| |||||||||||||||| || ||||||||||| |||||  ||| |||
Sbjct: 178 cgacgccgacaacttgacgcgatggggcggagcgctgctggagctatcgcaactgcgtaa 237

                                                                       
Query: 259 cggcccggagagcctcaagtgcctcgaagatgcggagtctaagctggatgaagcactgag 318
           |||||| || |||||||||  |||| ||||||||||  | |||||||| || ||||||  
Sbjct: 238 cggccccgacagcctcaagctcctccaagatgcggaagccaagctggaggaggcactgca 297

                                                                       
Query: 319 aattgatcccaacaaggctgatgcactctggtgcttggggaatgccctgacctctcgtgg 378
           |||||||||||||||| ||||||| |||||||||||||| ||||| | ||| |||| |||
Sbjct: 298 aattgatcccaacaagtctgatgcgctctggtgcttgggaaatgctcagacttctcatgg 357

                     
Query: 379 attcttcact 388
           ||||||||||
Sbjct: 358 attcttcact 367



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>gb|AY104647.1| Zea mays PCO146189 mRNA sequence
          Length = 1113

 Score =  170 bits (86), Expect = 3e-39
 Identities = 236/286 (82%)
 Strand = Plus / Plus

                                                                       
Query: 103 cgccatggacatggcagcgatgaacgacccggagaggctcttcttcttcgacctcgcctg 162
           ||||||||| |||| || ||||| |||| | ||| |||| |||||||||||  | |||||
Sbjct: 195 cgccatggagatgggagggatgagcgacgctgagcggctgttcttcttcgagatggcctg 254

                                                                       
Query: 163 caagaccgccaaggccacctacgacgagaacccgctcgacgccgacaacctgacgcgatg 222
           ||||| | || ||| | | |||||  |||||||   ||||||||||||||||||||| ||
Sbjct: 255 caagaactccgaggtcgcgtacgagcagaaccccaacgacgccgacaacctgacgcggtg 314

                                                                       
Query: 223 gggcggcgctctgctggagctgtcgcagatgcataacggcccggagagcctcaagtgcct 282
           ||||||||| |||||||||||||||||| | |  | |||||| || |||||||||   ||
Sbjct: 315 gggcggcgcgctgctggagctgtcgcaggtccgaaccggccccgacagcctcaagcttct 374

                                                                       
Query: 283 cgaagatgcggagtctaagctggatgaagcactgagaattgatcccaacaaggctgatgc 342
            |||||||||||  | || ||||| || |||||   |||||||||||||||| | |||||
Sbjct: 375 tgaagatgcggaagccaaactggaggaggcacttcaaattgatcccaacaagtccgatgc 434

                                                         
Query: 343 actctggtgcttggggaatgccctgacctctcgtggattcttcact 388
           ||||||||||||||| ||||| | |||||||| |||||||||||||
Sbjct: 435 actctggtgcttgggaaatgctcagacctctcatggattcttcact 480



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>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1485_B09
          Length = 66599

 Score =  147 bits (74), Expect = 4e-32
 Identities = 146/170 (85%)
 Strand = Plus / Plus

                                                                         
Query: 286   agatgcggagtctaagctggatgaagcactgagaattgatcccaacaaggctgatgcact 345
             ||||||||| || |||||||| |||||||||| |||||||||||  ||||| ||||| ||
Sbjct: 34557 agatgcggaatccaagctggaggaagcactgaaaattgatcccatgaaggcggatgcgct 34616

                                                                         
Query: 346   ctggtgcttggggaatgccctgacctctcgtggattcttcacttcggaaactgtccaggc 405
              ||||||||||| ||||| | |||||||| ||||||||||||||| || |||||| ||||
Sbjct: 34617 ttggtgcttgggaaatgcacagacctctcatggattcttcacttcagacactgtcaaggc 34676

                                                               
Query: 406   taatgaatgctttgaaaaagcaactggttgtttccagagggctgttgatg 455
              ||||||| ||||||||| |||||    |||||||||| |||||||||||
Sbjct: 34677 caatgaattctttgaaaaggcaacccagtgtttccagaaggctgttgatg 34726



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                         
Query: 103   cgccatggacatggcagcgatgaacgacccggagaggctcttcttcttcgacctcgcctg 162
             |||||||||||||| |||||||| ||| || |||||| | |||||||||||||| || ||
Sbjct: 33153 cgccatggacatgggagcgatgagcgatcctgagaggatgttcttcttcgacctggcatg 33212

                                                           
Query: 163   caagaccgccaaggccacctacgacgagaacccgctcgacgccgac 208
             | ||| |||||||| |||||||||  ||||||||| ||||||||||
Sbjct: 33213 ccagaacgccaaggtcacctacgaacagaacccgcacgacgccgac 33258



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                         
Query: 215   acgcgatggggcggcgctctgctggagctgtcgcagatgcataacggcccggagagcctc 274
             ||||| ||||| ||||| ||||| ||||| ||||||||||  |||||||| |||||||||
Sbjct: 33412 acgcggtggggaggcgcgctgctcgagctctcgcagatgcggaacggccccgagagcctc 33471

                          
Query: 275   aagtgcctcgaag 287
             |||||||| ||||
Sbjct: 33472 aagtgcctagaag 33484



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  147 bits (74), Expect = 4e-32
 Identities = 146/170 (85%)
 Strand = Plus / Plus

                                                                            
Query: 286      agatgcggagtctaagctggatgaagcactgagaattgatcccaacaaggctgatgcact 345
                ||||||||| || |||||||| |||||||||| |||||||||||  ||||| ||||| ||
Sbjct: 40235605 agatgcggaatccaagctggaggaagcactgaaaattgatcccatgaaggcggatgcgct 40235664

                                                                            
Query: 346      ctggtgcttggggaatgccctgacctctcgtggattcttcacttcggaaactgtccaggc 405
                 ||||||||||| ||||| | |||||||| ||||||||||||||| || |||||| ||||
Sbjct: 40235665 ttggtgcttgggaaatgcacagacctctcatggattcttcacttcagacactgtcaaggc 40235724

                                                                  
Query: 406      taatgaatgctttgaaaaagcaactggttgtttccagagggctgttgatg 455
                 ||||||| ||||||||| |||||    |||||||||| |||||||||||
Sbjct: 40235725 caatgaattctttgaaaaggcaacccagtgtttccagaaggctgttgatg 40235774



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                            
Query: 103      cgccatggacatggcagcgatgaacgacccggagaggctcttcttcttcgacctcgcctg 162
                |||||||||||||| |||||||| ||| || |||||| | |||||||||||||| || ||
Sbjct: 40234201 cgccatggacatgggagcgatgagcgatcctgagaggatgttcttcttcgacctggcatg 40234260

                                                              
Query: 163      caagaccgccaaggccacctacgacgagaacccgctcgacgccgac 208
                | ||| |||||||| |||||||||  ||||||||| ||||||||||
Sbjct: 40234261 ccagaacgccaaggtcacctacgaacagaacccgcacgacgccgac 40234306



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                            
Query: 215      acgcgatggggcggcgctctgctggagctgtcgcagatgcataacggcccggagagcctc 274
                ||||| ||||| ||||| ||||| ||||| ||||||||||  |||||||| |||||||||
Sbjct: 40234460 acgcggtggggaggcgcgctgctcgagctctcgcagatgcggaacggccccgagagcctc 40234519

                             
Query: 275      aagtgcctcgaag 287
                |||||||| ||||
Sbjct: 40234520 aagtgcctagaag 40234532



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>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1793G04
          Length = 156714

 Score =  147 bits (74), Expect = 4e-32
 Identities = 146/170 (85%)
 Strand = Plus / Plus

                                                                          
Query: 286    agatgcggagtctaagctggatgaagcactgagaattgatcccaacaaggctgatgcact 345
              ||||||||| || |||||||| |||||||||| |||||||||||  ||||| ||||| ||
Sbjct: 101383 agatgcggaatccaagctggaggaagcactgaaaattgatcccatgaaggcggatgcgct 101442

                                                                          
Query: 346    ctggtgcttggggaatgccctgacctctcgtggattcttcacttcggaaactgtccaggc 405
               ||||||||||| ||||| | |||||||| ||||||||||||||| || |||||| ||||
Sbjct: 101443 ttggtgcttgggaaatgcacagacctctcatggattcttcacttcagacactgtcaaggc 101502

                                                                
Query: 406    taatgaatgctttgaaaaagcaactggttgtttccagagggctgttgatg 455
               ||||||| ||||||||| |||||    |||||||||| |||||||||||
Sbjct: 101503 caatgaattctttgaaaaggcaacccagtgtttccagaaggctgttgatg 101552



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                          
Query: 103    cgccatggacatggcagcgatgaacgacccggagaggctcttcttcttcgacctcgcctg 162
              |||||||||||||| |||||||| ||| || |||||| | |||||||||||||| || ||
Sbjct: 99979  cgccatggacatgggagcgatgagcgatcctgagaggatgttcttcttcgacctggcatg 100038

                                                            
Query: 163    caagaccgccaaggccacctacgacgagaacccgctcgacgccgac 208
              | ||| |||||||| |||||||||  ||||||||| ||||||||||
Sbjct: 100039 ccagaacgccaaggtcacctacgaacagaacccgcacgacgccgac 100084



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                          
Query: 215    acgcgatggggcggcgctctgctggagctgtcgcagatgcataacggcccggagagcctc 274
              ||||| ||||| ||||| ||||| ||||| ||||||||||  |||||||| |||||||||
Sbjct: 100238 acgcggtggggaggcgcgctgctcgagctctcgcagatgcggaacggccccgagagcctc 100297

                           
Query: 275    aagtgcctcgaag 287
              |||||||| ||||
Sbjct: 100298 aagtgcctagaag 100310



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>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1425D05, complete sequence
          Length = 66450

 Score =  147 bits (74), Expect = 4e-32
 Identities = 146/170 (85%)
 Strand = Plus / Plus

                                                                         
Query: 286   agatgcggagtctaagctggatgaagcactgagaattgatcccaacaaggctgatgcact 345
             ||||||||| || |||||||| |||||||||| |||||||||||  ||||| ||||| ||
Sbjct: 26955 agatgcggaatccaagctggaggaagcactgaaaattgatcccatgaaggcggatgcgct 27014

                                                                         
Query: 346   ctggtgcttggggaatgccctgacctctcgtggattcttcacttcggaaactgtccaggc 405
              ||||||||||| ||||| | |||||||| ||||||||||||||| || |||||| ||||
Sbjct: 27015 ttggtgcttgggaaatgcacagacctctcatggattcttcacttcagacactgtcaaggc 27074

                                                               
Query: 406   taatgaatgctttgaaaaagcaactggttgtttccagagggctgttgatg 455
              ||||||| ||||||||| |||||    |||||||||| |||||||||||
Sbjct: 27075 caatgaattctttgaaaaggcaacccagtgtttccagaaggctgttgatg 27124



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                         
Query: 103   cgccatggacatggcagcgatgaacgacccggagaggctcttcttcttcgacctcgcctg 162
             |||||||||||||| |||||||| ||| || |||||| | |||||||||||||| || ||
Sbjct: 25551 cgccatggacatgggagcgatgagcgatcctgagaggatgttcttcttcgacctggcatg 25610

                                                           
Query: 163   caagaccgccaaggccacctacgacgagaacccgctcgacgccgac 208
             | ||| |||||||| |||||||||  ||||||||| ||||||||||
Sbjct: 25611 ccagaacgccaaggtcacctacgaacagaacccgcacgacgccgac 25656



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                         
Query: 215   acgcgatggggcggcgctctgctggagctgtcgcagatgcataacggcccggagagcctc 274
             ||||| ||||| ||||| ||||| ||||| ||||||||||  |||||||| |||||||||
Sbjct: 25810 acgcggtggggaggcgcgctgctcgagctctcgcagatgcggaacggccccgagagcctc 25869

                          
Query: 275   aagtgcctcgaag 287
             |||||||| ||||
Sbjct: 25870 aagtgcctagaag 25882



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>gb|BT017419.1| Zea mays clone EL01N0402C12.c mRNA sequence
          Length = 726

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 318 gaattgatcccaacaaggctgatgcactctggtgcttggggaatgccctgacctctcgtg 377
           ||||||||||||||||| | |||||||||||||||||||| ||||| | |||||||| ||
Sbjct: 8   gaattgatcccaacaagtccgatgcactctggtgcttgggaaatgctcagacctctcatg 67

                      
Query: 378 gattcttcact 388
           |||||||||||
Sbjct: 68  gattcttcact 78



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>emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19 on chromosome 3,
             complete sequence
          Length = 130239

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 347   tggtgcttggggaatgccctgacctctcgtggatt 381
             |||||||||||||||||||| || ||| |||||||
Sbjct: 19615 tggtgcttggggaatgcccttacgtcttgtggatt 19649



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 157     cgcctgcaagaccgccaaggccacct 182
               ||||||||||||||||| ||||||||
Sbjct: 4661880 cgcctgcaagaccgccacggccacct 4661855



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>emb|BX571974.6| Zebrafish DNA sequence from clone DKEY-29P4 in linkage group 12, complete
              sequence
          Length = 267018

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 399    tccaggctaatgaatgctttga 420
              ||||||||||||||||||||||
Sbjct: 219122 tccaggctaatgaatgctttga 219101



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>ref|XM_684032.1| PREDICTED: Danio rerio similar to CG15329-PA (LOC560635), mRNA
          Length = 1726

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 399 tccaggctaatgaatgctttga 420
           ||||||||||||||||||||||
Sbjct: 872 tccaggctaatgaatgctttga 893



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 191     aacccgctcgacgccgacaacctgac 216
               ||||||| ||||||||||||||||||
Sbjct: 2030962 aacccgcacgacgccgacaacctgac 2030987



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>gb|BC042276.1| Xenopus laevis serine hydroxymethyltransferase 1 (soluble), mRNA
            (cDNA clone MGC:53442 IMAGE:5571917), complete cds
          Length = 1738

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  gccctgacctctcgtggattc 382
            |||||||||||||||||||||
Sbjct: 1320 gccctgacctctcgtggattc 1340



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>gb|AC105173.10| Mus musculus chromosome 8, clone RP23-319J15, complete sequence
          Length = 186945

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   tgtttccagagggctgttga 453
             ||||||||||||||||||||
Sbjct: 13641 tgtttccagagggctgttga 13622



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>gb|BT017884.1| Zea mays clone EL01N0514G01.c mRNA sequence
          Length = 627

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 ccaaggccacctacgacgag 190
           ||||||||||||||||||||
Sbjct: 71  ccaaggccacctacgacgag 90



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>ref|XM_364795.1| Magnaporthe grisea 70-15 hypothetical protein (MG09640.4) partial
            mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  cctgcaagaccgccaaggcc 178
            ||||||||||||||||||||
Sbjct: 1385 cctgcaagaccgccaaggcc 1404



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>gb|AC134442.4| Mus musculus BAC clone RP24-104I4 from chromosome 8, complete sequence
          Length = 153086

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   tgtttccagagggctgttga 453
             ||||||||||||||||||||
Sbjct: 82609 tgtttccagagggctgttga 82590



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>gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, complete sequence
          Length = 209975

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    cggagaggctcttcttcttc 151
              ||||||||||||||||||||
Sbjct: 178944 cggagaggctcttcttcttc 178925



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>ref|XM_546282.2| PREDICTED: Canis familiaris similar to Heart- and neural crest
           derivatives-expressed protein 1 (Extraembryonic tissues,
           heart, autonomic nervous system and neural crest
           derivatives-expressed protein 1) (eHAND) (LOC489164),
           mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 tggggcggcgctctgctgga 240
           ||||||||||||||||||||
Sbjct: 254 tggggcggcgctctgctgga 235



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>gb|AY197475.1| Helicobacter pylori strain GU93-213 Hsp12 variant C (hsp12) gene,
           complete cds
          Length = 1341

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 403 ggctaatgaatgctttgaaaaagc 426
           |||||| |||||||||||||||||
Sbjct: 319 ggctaaggaatgctttgaaaaagc 342



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>gb|AC099676.2| Homo sapiens chromosome 1 clone RP11-465N4, complete sequence
          Length = 204679

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 416   tttgaaaaagcaactggttgtttc 439
             |||||||||||||||| |||||||
Sbjct: 42018 tttgaaaaagcaactgcttgtttc 41995



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>gb|AC090797.5| Homo sapiens chromosome 8, clone RP11-586K2, complete sequence
          Length = 193929

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 299   aagctggatgaagcactgagaatt 322
             |||||| |||||||||||||||||
Sbjct: 64693 aagctgcatgaagcactgagaatt 64716



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>gb|AC020807.2| Mus musculus chromosome 18 clone RG-MBAC_225G20, complete sequence
          Length = 81195

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 424   agcaactggttgtttccagagggc 447
             |||||||||||| |||||||||||
Sbjct: 59211 agcaactggttgcttccagagggc 59234



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>gb|AC090980.5| Homo sapiens chromosome 8, clone RP11-433O22, complete sequence
          Length = 182881

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 299    aagctggatgaagcactgagaatt 322
              |||||| |||||||||||||||||
Sbjct: 128680 aagctgcatgaagcactgagaatt 128703



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>gb|AC091750.1|AC091750 Mus musculus chromosome 18 clone unknown, complete sequence
          Length = 81195

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 424   agcaactggttgtttccagagggc 447
             |||||||||||| |||||||||||
Sbjct: 59211 agcaactggttgcttccagagggc 59234



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>gb|DQ003082.1| Homo sapiens matrix metalloproteinase 16 (membrane-inserted) (MMP16)
             gene, complete cds
          Length = 290137

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 299   aagctggatgaagcactgagaatt 322
             |||||| |||||||||||||||||
Sbjct: 63550 aagctgcatgaagcactgagaatt 63527



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>gb|AC140361.2| Mus musculus BAC clone RP24-247B3 from chromosome 17, complete sequence
          Length = 157937

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   cggagaggctcttcttcttc 151
             ||||||||||||||||||||
Sbjct: 41244 cggagaggctcttcttcttc 41225



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>gb|AY104013.1| Zea mays PCO085678 mRNA sequence
          Length = 736

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 ccaaggccacctacgacgag 190
           ||||||||||||||||||||
Sbjct: 135 ccaaggccacctacgacgag 154



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>emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chromosome 18, complete
            sequence
          Length = 174264

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 424  agcaactggttgtttccagagggc 447
            |||||||||||| |||||||||||
Sbjct: 8827 agcaactggttgcttccagagggc 8850



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>emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on chromosome 4, complete
              sequence
          Length = 166942

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 414    gctttgaaaaagcaactggttgtt 437
              |||||||||||||||||| |||||
Sbjct: 154816 gctttgaaaaagcaactgtttgtt 154793



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>gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, RP23-233F17, complete
              sequence
          Length = 176773

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 424    agcaactggttgtttccagagggc 447
              |||||||||||| |||||||||||
Sbjct: 131443 agcaactggttgcttccagagggc 131466


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,496,543
Number of Sequences: 3902068
Number of extensions: 3496543
Number of successful extensions: 52768
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52630
Number of HSP's gapped (non-prelim): 131
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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