>SMG7_MOUSE (Q5RJH6) Protein SMG7 (SMG-7 homolog) (EST1-like protein C)|
          Length = 1138

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 400 PPSRPAPAALVSMDAAAQHSLFFLDALSSVWQKPTSLAPAAYCSP 266
           PPS+P   +L +   A   S   + AL+   Q PT + PA   SP
Sbjct: 689 PPSQPPLTSLPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSP 733

>LRC46_RAT (Q6AXZ2) Leucine-rich repeat-containing protein 46|
          Length = 323

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 262 LWESNKQPEQERWVSARQTRAHPERRESAELQHPW 366
           L + +KQP  ERW S  + ++  E  E  EL  P+
Sbjct: 165 LLDLDKQPILERWTSDEEDKSSDEEEEFPELNGPF 199

>DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO|
           GRAVITY) (AtARG1) (AtJ15) (AtDjB15)
          Length = 410

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 153 DNLAN*NILVARGKESKSDSRSSGERNGSSLNRE 254
           +NL+N +   A+G ESK D  S+GE  G+  NR+
Sbjct: 359 NNLSNGSSSKAQGDESKGDGDSAGEEGGTE-NRD 391

>MTFA_XYLFT (Q87AC0) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 351

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
 Frame = +1

Query: 46  VASDEMLRGVENKHRSGDSQIGQP-FKLPAESMSRQETTWRTE--TS**PEEKKAKAIPV 216
           ++ D +L G      S   Q+G P  KL  E+ SR          T   P E++AK  P 
Sbjct: 151 LSGDHVLLGSTRSVDSAPWQLGIPRLKLLPEAPSRSALKLEEALITLLTPNEREAKLRPG 210

Query: 217 VAASEMGAA*TVKTGLWESNKQPEQERWVSARQTRAHPERRESAELQH----PWRLAPPA 384
           + A+++GAA     G W      +  R  S       P       +QH     +R  PP 
Sbjct: 211 MCATDLGAA----PGGWTWVLICQHLRVTSIDNAALRPPLLNHPLVQHVRADGFRWIPPR 266

Query: 385 PAD 393
           P D
Sbjct: 267 PMD 269

>PYR1_SCHPO (Q09794) Protein ura1 [Includes: Glutamine-dependent|
           carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate
           carbamoyltransferase (EC 2.1.3.2)]
          Length = 2244

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 25  HPETRKGVASDEMLRGV--ENKHRSGDSQIGQPFKLPAESMSRQET 156
           HPE+  G    E L  V  +   RS D++  QPFKLP  ++    +
Sbjct: 422 HPESTPGPRDTEFLFDVFIDVVKRSADAKSLQPFKLPGGTIEENRS 467


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,972,949
Number of Sequences: 219361
Number of extensions: 873469
Number of successful extensions: 2483
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2482
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)